Compositions and methods for detecting viruses in a sample

ABSTRACT

The present disclosure provides a composition comprising a panel of probes for detecting one or more viruses in a sample. The panel of probes may be used to detect viruses in a biological sample obtained from a subject.

CROSS REFERENCE TO RELATED APPLICATIONS

This application claims the benefit of U.S. Provisional Application 62/289,011 filed Jan. 27, 2016, which is hereby incorporated by reference in its entirety.

GOVERNMENTAL RIGHTS

This invention was made with government support under R01 AI097213 awarded by the National Institutes of Health. The government has certain rights in the invention.

FIELD OF THE INVENTION

The present disclosure provides a composition comprising a panel of probes for detecting one or more viruses in a sample. The panel of probes may be used to detect viruses in a biological sample obtained from a subject.

BACKGROUND OF THE INVENTION

High-throughput, massively parallel nucleotide sequence analysis has made in-depth studies of the human microbiome feasible. Thus far, most microbiome studies have focused on bacteria, although some include fungi. Viruses are particularly understudied, in part due to the challenges of assessing their presence in clinical samples. Viruses as a group have highly variable genomes, with no gene shared among all viruses that can be surveyed by an amplicon-based sequencing strategy. Therefore, studies of viruses based on nucleotide sequencing require a metagenomic approach. Metagenomic shotgun sequencing (MSS) is a relatively unbiased, culture-independent method in which nucleic acid extracted from a sample is sequenced. Sequence reads are classified based on similarity to reference genomes. This approach allows comprehensive study of the viral component of the microbiome (the virome) and has led to the discovery of novel viruses and the characterization of viruses present in healthy and sick people. When adequate numbers of sequence reads are generated, viruses can be characterized with regard to taxonomy and the presence of genes associated with virulence and resistance to antiviral drugs.

A limitation of MSS as employed to date for virus detection is that the amount and proportion of viral nucleic acid in samples from humans may be very low, and in these cases, few viral sequences are generated. Additionally, it has been shown that viruses known to be present based on molecular assays are undetectable using MSS. These difficulties may reflect the small genome size of some viruses and/or low levels of virus in the sample. This can be a particular problem for studies of the virome of healthy, asymptomatic individuals, in whom virus levels may be low. Thus, there is a need for a method of enriching viral sequences in a metagenomic sample prior to sequencing.

SUMMARY OF THE INVENTION

In an aspect, the disclosure provides a method to detect one or more viruses in a sample. The method comprises: a) contacting a sample with a panel comprising probes capable of specifically hybridizing to greater than 10,000 viral nucleic acid sequences; b) isolating the probes that specifically hybridize to viral nucleic acid sequences within the sample; c) sequencing the viral nucleic acid sequences isolated; and d) comparing the sequences from (c) with a database comprising reference viral nucleic acid sequences to determine the identity of the viral nucleic acid in the sample.

In another aspect, the disclosure provides a kit for detecting viral nucleic acid. The kit comprises probes capable of specifically hybridizing to greater than 10,000 viral nucleic acid sequences.

In still another aspect, the disclosure provides a cohort of viral nucleic acid sequences. The cohort of viral nucleic acid sequences comprises viral nucleic acid sequences from NCBI's RefSeq collection, complementary representation of unique regions from Genome Neighbor targets, selected representation of NCBI Influenza Virus Resource sequences, and the entirety of the probe space represented on the Virochip microarray, GEO accession number GPL15905.

BRIEF DESCRIPTION OF THE FIGURES

The application file contains at least one drawing executed in color. Copies of this patent application publication with color drawing(s) will be provided by the Office upon request and payment of the necessary fee.

FIG. 1 depicts the taxonomic distribution of target genomes included in ViroCap. Shown are the viral groups and families included in the ViroCap targeted sequence capture panel. A highlighted subset illustrates underlying genera. To view complete genera for all families, see FIG. 4A. Taxonomic assignments were obtained from the NCBI Taxonomy Viewer

(www.ncbi.nlm.nih.govigenomes/GenomesGroup.cgi?opt=virus&taxid=10239).

FIG. 2A, FIG. 2B, FIG. 2C, FIG. 2D, FIG. 2E, FIG. 2F, FIG. 2G, and FIG. 2H depict targeted sequence capture enrichment. Examples are given showing the impact of targeted sequence capture on breadth and depth of genome coverage for eight representative viral genomes. For illustrative purposes, all of the coverage panels in this figure have been normalized by removing (deduplicating) reads based on identical alignment start-sites. Nucleotide positions along the reference genome are shown on the x-axis. The depth of deduplicated reads is shown on the y-axis. The shaded portion indicates the sequence coverage (breadth and depth) for each virus. Post-capture sequence coverage is represented in the larger panels in blue; precapture sequence coverage is shown in the insets in red. Note that y-axis ranges are different for each panel. At the top of each panel is shown the breadth of coverage (BoC) for the sample. The header of each panel includes breadth of coverage gain (BoC gain), sample id, and reference genome name and NCBI version number. BoC gain is calculated by subtracting the percentage of the length of the reference genome that was covered by sequence reads in precapture MSS from the percentage of the length of the reference genome covered by post-capture sequence reads.

FIG. 3A and FIG. 3B depict targeted sequence capture identifies divergent sequences. (FIG. 3A) The percentage identity of the top high-scoring segment pair (HSP) identified from the BLAST alignment of anellovirus contig sequences to the references used to design ViroCap is plotted on the y-axis. The x-axis represents the percentage of the length of the anellovirus contig covered after targeted sequence capture. (FIG. 3B) This coverage plot represents the sequence coverage of a divergent anellovirus contig sequence. The figure is designed as described in the figure legend for FIG. 2, with the following addition: The post-capture coverage plot is shaded to show regions of nucleotide sequence variation between the anellovirus contig and the most similar reference genome in the ViroCap panel. Dark shading represents areas of identical sequence, and each position with nucleotide mismatch between aligned sequences is shown in the lighter color. All of the HSPs are shown, rather than just the top HSP.

FIG. 4A and FIG. 4B depict the taxonomic distribution of target genomes. (FIG. 4A) Shown are the viral groups, families, and genera included in the ViroCap targeted sequence capture panel. (FIG. 4B) Shown are the viral groups, families and genera included in the samples used in ViroCap validation. Taxonomic assignments for FIG. 4A and FIG. 4B were obtained from the NCBI Taxonomy Viewer

(www.ncbi.nlm.nih.gov/genomes/GenomesGroup.cgi?opt=virus&taxid=10239).

FIG. 5 depicts non-viral read classification based on metagenomic shotgun sequencing before and after viral targeted sequence capture. Classifications of non-viral reads were determined based on nucleotide sequence alignment against bacterial and fungal reference genomes, the human genome, NCBI nt, and capture positive control sequences (positive control probes targeting human genes as included by NimbleGen). The percentages of reads per category are shown on the stacked bar charts and in the data table. For each sample, a small percentage of non-viral reads did not map to any of the reference databases evaluated. Proportions of reads mapping to bacteria/fungi, human, and NCBI nt references was similar pre- and post-capture, indicating the viral capture probes did not consistently or strikingly enrich any other class of organisms expected to be found in these samples. As expected, the positive controls were enriched post-capture in each case.

FIG. 6 depicts human chromosome identities based on metagenomic shotgun sequencing before and after viral targeted sequence capture. The proportions of sequences mapping to each human chromosome and mitochondria are plotted. Viral capture probes did not enrich sequences from human chromosomes. The percentages of human-mapped reads are shown on the stacked bar graphs and in the data table (Table 11).

FIG. 7A, FIG. 7B, FIG. 7C and FIG. 7D depict Genome Neighbor target sequence selection. The general approach for Genome Neighbor target sequence selection is illustrated. While this process is performed on all viral RefSeqs, here we illustrate a small genomic region of a single RefSeq and Genome Neighbor pairing. First, all Genome Neighbor sequences related to a single RefSeq entry are located and associated. In this example, the single Genome Neighbor sequence shown, when compared to RefSeq, has a 100 bp span of alternative sequence (FIG. 7A). The Genome Neighbor sequence is used to generate k-mers of length 100 bp (i.e. capture probe analogs) by means of an exhaustive 1 bp sliding window algorithm, retaining genomic coordinate origin information for each k-mer (FIG. 7A). The resultant set of 100-mers accounts for all potential target sequences that could be used to capture this region. In this example, when comparing Genome Neighbor 100-mers to the corresponding RefSeq genome there is one 100-mer that is completely variant compared to RefSeq, and a set of other 100-mers containing both variant and conserved regions across their lengths due to the nature of the sliding window effect (FIG. 7B). We identify 100-mers that are not represented in the RefSeq genome by sequence clustering (FIG. 7C). Any 100-mers that have >=90% identity to the RefSeq genome are not added to the capture target sequence (Cluster 1, labeled within the figure as “Discarded”). Sequences with <90% identity to RefSeq will form clusters representing variant sequences (Clusters 2-10, labeled within the figure as “Retained”). 100-mers from the variant, non-RefSeq clusters are collected and merged based on genomic coordinates into single, contiguous Genome Neighbor sequence representations used for targeted sequence capture (FIG. 7D).

DETAILED DESCRIPTION OF THE INVENTION

The inventors have designed a panel of probes that specifically hybridize to viral nucleic acid sequences (referred to herein as “the ViroCap panel”) to enhance the sensitivity of metagenomic shotgun sequencing (MSS) for comprehensive detection of known vertebrate viruses, as well as to detect divergent viruses that have nucleotide sequence similarities to known viruses. The inventors have demonstrated that targeted sequence capture using ViroCap dramatically increases the amount of viral sequence obtained from human samples compared with conventional MSS, greatly enhancing the resolution of genomic characterization and increasing the number of viruses detected by >50%. Enhancement was demonstrated for DNA and RNA viruses from multiple diverse families. The increased sensitivity will be valuable in multiple research applications, including descriptions of the human virome, and will also improve the potential for MSS as a diagnostic tool in human and animal health.

The dramatic enrichment of viral nucleic acids present within the targeted sequence capture libraries offers important advantages. First, as the inventors demonstrate, MSS with ViroCap can be used to generate complete or nearly complete genome sequences directly from clinical samples, including those with very low proportions of viral nucleic acid, without culturing the viruses. Availability of extensive sequence data provides the opportunity to distinguish among closely related virus subtypes or even among viral strains, which might not be distinguished by other types of assays. Second, the use of ViroCap can reduce the depth of sequencing needed to detect viruses in samples. Because targeted sequence capture results in a large increase in the percentage of sequencing reads that are viral, ViroCap achieves better viral coverage while requiring the generation of fewer total sequence reads. This increased efficiency has the potential to lower sequencing costs.

I. Methods

The present disclosure provides a method to detect one or more viruses in a sample. The sample may be a sample from a subject, the environment, a laboratory, or any sample in which nucleic acid is present. When the sample is from a subject, the sample may be from a nasopharyngeal swab stool, sputum, urine, plasma, peripheral blood, serum, bone marrow, tissue, and other bodily fluids. In a specific embodiment, the sample is selected from the group consisting of nasopharyngeal swab, stool and plasma. The tissue sample may be a tissue biopsy. The biopsied tissue may be fixed, embedded in paraffin or plastic, and sectioned, or the biopsied tissue may be frozen and cryosectioned. Alternatively, the biopsied tissue may be processed into individual cells or an explant, or processed into a homogenate, a cell extract, a membranous fraction, or a protein extract.

The sample may be used “as is”, processed for cell lysis or disruption of viral particles, or the nucleic acid may be purified from the sample prior to sample preparation. Methods of isolating nucleic acid from a sample are known in the art. In certain embodiments, the isolated nucleic acid is reverse transcribed an amplified after isolation. This allows detection of both RNA and DNA viruses. Specifically, RNA in the total nucleic acid may be reverse transcribed with reverse transcriptase. Random nonomers may then be tagged with a conserved sequence to be used for subsequent amplification. Second strand synthesis may then be carried out using DNA polymerase to generate cDNA for the RNA viruses.

The DNA/cDNA mixture may then be amplified using DNA polymerase. In general, amplification is carried out using polymerase chain reaction (PCR). A PCR reaction may comprise nucleic acid, primers, polymerase, water, buffer, and deoxynucleotide triphosphates (dNTPs). PCR may be performed according to standard methods in the art. By way of non-limiting example, the PCR reaction may comprise denaturation, followed by about 5-10 cycles of denaturation, annealing and extension, followed by a final extension. In an exemplary embodiment, the PCR reaction comprises denaturation at about 98° C. for about 30 seconds, followed by about 5 to about 10 cycles of (about 98° C. for about 10 seconds, about 62-72° C. for about 30 seconds, about 72° C. for about 30 seconds), followed by a final extension at about 72° C. for about 5 minutes. Optionally, the amplified nucleic acid is then purified, for example, via column purification. The nucleic acid in the sample may then be sheared via methods known in the art to generate fragments. The fragments may be about 100 to about 2000 bp. For example, the fragments may be about 200 to about 1500 bp, about 400 to about 1000 bp, about 400 to about 800 bp, or about 500 bp.

If a sample is from a subject, the subject may be a rodent, a human, a livestock animal, a companion animal, a zoological animal, or an invertebrate vector. In one embodiment, the subject may be a rodent, e.g. a mouse, a rat, a guinea pig, etc. In another embodiment, the subject may be a livestock animal. Non-limiting examples of suitable livestock animals may include pigs, cows, horses, goats, sheep, llamas and alpacas. In still another embodiment, the subject may be a companion animal. Non-limiting examples of companion animals may include pets such as dogs, cats, rabbits, and birds. In yet another embodiment, the subject may be a zoological animal. As used herein, a “zoological animal” refers to an animal that may be found in a zoo. Such animals may include non-human primates, large cats, wolves, and bears. Non-limiting examples of suitable invertebrate vectors include mosquitoes, ticks, flies, and lice. In a preferred embodiment, the subject is a human.

A method of the disclosure comprises, in part, contacting a sample with a panel comprising probes capable of specifically hybridizing to greater than 10,000 viral nucleic acid sequences. As used herein, a “probe” is a nucleic acid probe, such as an oligonucleotide of at least 15, 30, 50, 100, 250, 500, 750 or more nucleotides in length, that specifically hybridizes under stringent conditions to a viral nucleic acid. For example, high stringency conditions, such as high hybridization temperature and low salt in hybridization buffers, permit only hybridization between nucleic acid sequences that are highly similar. In a specific embodiment, the probes may be about 50 to about 105 base pairs (bp). In another specific embodiment, the probes may be about 100 bp.

The probes for inclusion in the panel are designed based on a cohort of viral nucleic acid sequences. The cohort of viral nucleic acid sequences may be designed as set forth in the Examples. Specifically, the cohort of viral nucleic acid sequences comprises viral nucleic acid sequences from NCBI's RefSeq collection, complementary representation of unique regions from Genome Neighbor targets, selected representation of NCBI Influenza Virus Resource sequences, and the entirety of the probe space represented on the Virochip microarray (Yu et al. 2012), GEO accession number GPL15905. The cohort of viral nucleic acid sequences comprises viral nucleic acid sequences from all DNA and RNA viruses with sequenced genomes from vertebrate hosts, excluding human endogenous retroviruses and bacteriophages. The cohort of viral nucleic acid sequences comprises more than 150,000, more than 160,000, more than 170,000, or more than 180,000 viral nucleic acid sequences. Specifically, the cohort of viral nucleic acid sequences comprises 185,835 viral nucleic acid sequences. The cohort of viral nucleic acid sequences comprises greater than 150 Mb, greater than 160 Mb, greater than 170 Mb, greater than 180 Mb, or greater than 190 Mb of viral nucleic acid sequences. Specifically, the cohort of viral nucleic acid sequences comprises 198.9 Mb of viral nucleic acid sequences. Even more specifically, the cohort of viral nucleic acid sequences comprises about 27 Mb of viral nucleic acid sequences from RefSeq, about 153 Mb of viral nucleic acid sequences from Genome Neighbor targets, about 16 Mb from Influenza Virus Resource sequences, and about 3 Mb of viral nucleic acid sequences from Virochip microarray. The cohort of viral nucleic acid sequences is used to design a panel of probes that specifically hybridize to the viral nucleic acid sequences of the cohort of viral nucleic acid sequences.

A panel of the disclosure comprises greater than 1×10⁴ probes capable of specifically hybridizing to the viral nucleic acid sequences of the cohort of viral nucleic acid sequences. For example, a panel of the disclosure comprises greater than 1×10⁴ probes, greater than 2×10⁴ probes, greater than 3×10⁴ probes, greater than 4×10⁴ probes, greater than 5×10⁴ probes, greater than 6×10⁴ probes, greater than 7×10⁴ probes, greater than 8×10⁴ probes, greater than 9×10⁴ probes, greater than 1×10⁵ probes, greater than 2×10⁵ probes, greater than 3×10⁵ probes, greater than 4×10⁵ probes, greater than 5×10⁵ probes, greater than 6×10⁵ probes, greater than 7×10⁵ probes, greater than 8×10⁵ probes, greater than 9×10⁵ probes, greater than 1×10⁶ probes, greater than 2×10⁶ probes, greater than 3×10⁶ probes, greater than 4×10⁶ probes, greater than 5×10⁶ probes, greater than 6×10⁶ probes, greater than 7×10⁶ probes, greater than 8×10⁶ probes, greater than 9×10⁶ probes, or greater than 1×10⁷ probes capable of specifically hybridizing to the viral nucleic acid sequences of the cohort of viral nucleic acid sequences. In a specific embodiment, a panel of the disclosure comprises about 2×10⁶ probes capable of specifically hybridizing to the viral nucleic acid sequences of the cohort of viral nucleic acid sequences.

A panel of the disclosure comprises probes capable of specifically hybridizing to greater than 10,000 viral nucleic acid sequences. For example, a panel of the disclosure comprises probes capable of specifically hybridizing to greater than 10,000, greater than 15,000, greater than 20,000, greater than 25,000, greater than 30,000, greater than 35,000, greater than 40,000, greater than 45,000, greater than 50,000, greater than 55,000, greater than 60,000, greater than 65,000, greater than 70,000, greater than 75,000, greater than 80,000, greater than 85,000, greater than 90,000, greater than 95,000, greater than 100,000, greater than 110,000, greater than 120,000, greater than 130,000, greater than 140,000, greater than 150,000, greater than 160,000, greater than 170,000, greater than 180,000, greater than 190,000, or greater than 200,000 viral nucleic acid sequences. In an exemplary embodiment, a panel of the disclosure comprises probes capable of specifically hybridizing to 185,835 viral nucleic acid sequences. For a listing of all the sequences utilized in the ViroCap panel of the disclosure, see Wylie et al., Enhanced virome sequencing using targeted sequence capture. Genome Res 2015; 24(12): 1910-20, the disclosure of which is hereby incorporated by reference in its entirety, including all supplemental information and zip files associated with the publication.

Additionally, a panel of the disclosure comprises probes capable of specifically hybridizing to greater than 50 Mb of viral nucleic acid sequences. For example, a panel of the disclosure comprises probes capable of specifically hybridizing to greater than 50 Mb, greater than 60 Mb, greater than 70 Mb, greater than 80 Mb, greater than 90 Mb, greater than 100 Mb, greater than 110 Mb, greater than 120 Mb, greater than 130 Mb, greater than 140 Mb, greater than 150 Mb, greater than 160 Mb, greater than 170 Mb, greater than 180 Mb, greater than 190 Mb, or greater than 200 Mb of viral nucleic acid sequences. In an exemplary embodiment, a panel of the disclosure comprises probes capable of specifically hybridizing to 198.9 Mb of viral nucleic acid sequences.

Further, a panel of the disclosure comprises probes capable of specifically hybridizing to viral nucleic acid sequences from all DNA and RNA viruses with sequenced genomes from vertebrate hosts, excluding human endogenous retroviruses and bacteriophages. In certain embodiments, a panel of the disclosure comprises probes capable of specifically hybridizing to viral nucleic acid sequences from NCBI's RefSeq collection, complementary representation of unique regions from NCBI Genome Neighbor targets, selected representation of NCBI Influenza Virus Resource sequences, and the entirety of the probe space represented on the Virochip microarray (Yu et al. 2012), GEO accession number GPL15905. The viral nucleic acid sequences may be consolidated via methods described in the Examples. In certain embodiments, a panel of the disclosure comprises probes capable of specifically hybridizing to about 27 Mb of viral nucleic acid sequences from RefSeq, about 153 Mb of viral nucleic acid sequences from Genome Neighbor targets, about 16 Mb from Influenza Virus Resource sequences, and about 3 Mb of viral nucleic acid sequences from Virochip microarray. Importantly, the panel of probes described herein may be continually updated via the methods described herein as new sequences become available.

More specifically, a panel of the disclosure comprises probes capable of specifically hybridizing to viral nucleic acid sequences from 34 viral families comprising 190 annotated viral genera and 337 species. Non-limiting examples of viral families with which the probes are capable of specifically hybridizing to include Adenoviridae, Alloherpesviridae, Asfarviridae, Herpesviridae, Iridoviridae, Malacoherpesviridae, Papillomaviridae, Polyomaviridae, Poxviridae, Birnaviridae, Picobirnaviridae, Reoviridae, Retroviridae, Hepadnaviridae, Parvoviridae, Anelloviridae, Circoviridae, Coronaviridae, Bunyaviridae, Flaviviridae, Orthomyxoviridae, Caliciviridae, Togaviridae, Arenaviridae, Arteriviridae, Astroviridae, Bornaviridae, Filoviridae, Hepeviridae, Paramyxoviridae, Picornaviridae, and Rhabdoviridae. In an exemplary embodiment, a panel of the disclosure comprises probes capable of specifically hybridizing to viral nucleic acid sequences from the viruses depicted in FIG. 4A. In an exemplary embodiment, a panel of the disclosure comprises probes capable of specifically hybridizing to viral nucleic acid sequences from the viruses listed in Table 10.

Hybridization of the probes to the nucleic acid may be done via methods standard in the art. For example, the nucleic acid may first be denatured such that it is single stranded and then the panel of probes and nucleic acid may be incubated at elevated temperature for about 1 to about 72 hours. More specifically, the nucleic acid may be denatured at >95° C. for about 20 minutes and then the panel of probes and nucleic acid may be incubated at about 47° C. for about 64 hours to about 72 hours.

Prior to, during or after hybridization an index sequence and adapter may be attached to the nucleic acid fragments. As used herein, an “adapter” is a sequence that permits universal amplification. A key feature of the adapter is to enable the unique amplification of the hybridized nucleic acid only without the need to remove existing template nucleic acid or purify the hybridized nucleic acid. This feature enables an “add only” reaction with fewer steps and ease of automation. The adapter is attached to the 5′ and 3′ end of the hybridized nucleic acid. The adapter may be Y-shaped, U-shaped, hairpin-shaped, or a combination thereof. In a specific embodiment, the adaptor is Y-shaped. In another specific embodiment, the adapter may be an Illumina adapter for Illumina sequencing. An index sequence may also be attached to each nucleic acid fragment. The addition of an index sequence allows pooling of multiple samples into a single sequencing run. This greatly increases experimental scalability, while maintaining extremely low error rates and conserving read length. The index sequence may be about 5 to about 10 nucleotides. Accordingly, the index sequence may be 5, 6, 7, 8, 9 or 10 or more nucleotides. In an embodiment, the index sequence is about 6 nucleotides.

A method of the disclosure further comprises, in part, isolating the probes that specifically hybridize to viral nucleic acid sequences within the sample. Methods of isolating probes are known in the art. In a specific embodiment, bead purification may be used to isolate the probes that specifically hybridize to viral nucleic acid sequences within the sample. For example, Streptavidin beads may be used. The Streptavidin beads may be incubated with the hybridized sample at about 47° C. for about 45 minutes. The sample may then be washed to remove unbound beads.

The isolated viral nucleic acid sequences may then be amplified. In general, amplification is carried out using polymerase chain reaction (PCR). A PCR reaction may comprise isolated viral nucleic acid, primers, polymerase, water, buffer, and deoxynucleotide triphosphates (dNTPs). PCR may be performed according to standard methods in the art. By way of non-limiting example, the PCR reaction may comprise denaturation, followed by about 10-20 cycles of denaturation, annealing and extension, followed by a final extension. In an exemplary embodiment, the PCR reaction comprises denaturation at about 98° C. for about 30 seconds, followed by about 10 to about 20 cycles of (about 98° C. for about 10 seconds, about 60-72° C. for about 30 seconds, about 72° C. for about 30 seconds), followed by a final extension at about 72° C. for about 5 minutes. Optionally, the amplified viral nucleic acid is then purified, for example, via column purification.

A method of the disclosure further comprises, in part, sequencing the isolated viral nucleic acid sequences. Sequencing may be performed according to standard methods in the art. Sequencing is preferably performed on a massively parallel sequencing platform, many of which are commercially available including, but not limited to Illumina, Roche/454, Ion Torrent, Oxford Nanopore Technologies and PacBio. In an exemplary embodiment, Illumina sequencing is used.

After sequencing of the viral nucleic acid, the sequences are compared with a database comprising reference viral nucleic acid sequences to determine the identity of the viral nucleic acid in the sample. Comparison of sequences generally involves aligning the experimentally determined sequence with a reference sequence. Methods of aligning sequences are known in the art. In a specific embodiment, the alignment algorithm utilized may be BWA-MEM. BWA-MEM is an alignment algorithm for aligning sequence reads or long query sequences against a large reference genome. It automatically chooses between local and end-to-end alignments, supports paired-end reads and performs chimeric alignment. The algorithm is robust to sequencing errors and applicable to a wide range of sequence lengths from 70 bp to a few megabases. For mapping 100 bp sequences, BWA-MEM shows better performance than several state-of-art read aligners to date. The sequence alignments may then be evaluated to determine the identity of the viral nucleic acid in the sample. Methods of evaluating sequence alignments are known in the art. In a specific embodiment, SAMtools is utilized to evaluate the sequence alignments. SAMtools is a set of utilities for interacting with and post-processing short DNA sequence read alignments in the SAM (=Sequence Alignment/Map), BAM (=Binary Alignment/Map) and CRAM formats. Both simple and advanced tools are provided, supporting complex tasks like variant calling and alignment viewing as well as sorting, indexing, data extraction and format conversion.

A method of detecting one or more viruses as described herein increases the number of viruses detected relative to MSS alone. For example, the method of detecting viruses described herein increases the number of viruses detected by greater than 40% relative to MSS alone. Accordingly, the method of detecting viruses described herein increases the number of viruses detected by greater than 40%, greater than 45%, greater than 50%, greater than 55%, greater than 60%, greater than 65%, greater than 70%, greater than 75%, greater than 80%, greater than 85%, greater than 90%, or greater than 95% relative to MSS alone. In a specific embodiment, the method of detecting viruses described herein increases the number of viruses detected by greater than 50% relative to MSS alone.

A method of detecting one or more viruses as described herein increases the breadth of coverage of viral genomes relative to MSS alone. For example, the method of detecting viruses described herein results in a breadth of coverage of greater than 40%. Accordingly, the method of detecting viruses described herein results in a breadth of coverage of greater than 40%, greater than 45%, greater than 50%, greater than 55%, greater than 60%, greater than 65%, greater than 70%, greater than 75%, greater than 80%, greater than 85%, greater than 90%, or greater than 95%. In a specific embodiment, the method of detecting viruses described herein results in a breadth of coverage of greater than 80%. In another specific embodiment, the method of detecting viruses described herein results in a breadth of coverage of greater than 90%.

In certain embodiments, if the sample is a biological sample obtained from a subject, the subject is treated based on the virus detected. Accordingly, a method of the disclosure may be used to diagnose, treat or prevent a disease in a subject. Identification of a virus in a subject could facilitate the diagnosis of a disease, enable the proper methodology, such as a therapeutic, to treat the disease, or prevent the onset of disease by administration of prophylactic therapies. Additionally, identification of anti-viral drug resistant strain could facilitate better treatment strategies.

Importantly, using the methods described herein, a panel of probes could comprise probes that specifically hybridize to bacteria and associated plasmids, fungi, protists, and other microbes. For bacteria, the probes may specifically hybridize to virulence genes such as toxin genes or antibiotic resistance genes. Using the methods described herein, specifically those detailed in the Examples, one of ordinary skill in the art would be able to design a panel of probes to detect a variety of human pathogens. Accordingly, the panel of probes of the disclosure may comprise a comprehensive set of probes to detect a variety of human pathogens. As such, a method of the disclosure may further comprise a method of detecting a pathogen in a sample. As described above, the sample may be environmental or a biological sample obtained from a subject. Additionally, a method of the disclosure may further comprise a method of detecting an infection in a subject. The term “infection” as used herein includes the presence of pathogens in or on a subject, which, if its growth were inhibited, would result in a benefit to the subject. As such, the term “infection” in addition to referring to the presence of pathogens also refers to normal flora which are not desirable. The term “pathogen” as used herein refers to an infectious agent that can produce disease. Non-limiting examples of an infectious agent include virus, bacterium, prion, fungus, viroid, or parasite that cause disease in a subject.

II. Kit

In another aspect, the disclosure provides a kit comprising a panel of the disclosure as described in Section I. More specifically, a kit comprises a panel of probes that specifically hybridize to viral nucleic acid sequences as described in Section I. The kit may also comprise detection agents that can detect hybridization of the probes to the viral nucleic acid sequences of the disclosure, and instructions for use. A person skilled in the art will appreciate that a number of detection agents can be used to detect hybridization of the probes to viral nucleic acid sequences. For example, the detection agent can be a label. The label is preferably capable of producing, either directly or indirectly, a detectable signal. For example, the label may be radio-opaque or a radioisotope, such as ³H, ¹⁴C; ³²P, ³⁵S; ¹²³I; ¹²⁵I; ¹³¹I; a fluorescent (fluorophore) or chemiluminescent (chromophore) compound, such as fluorescein isothiocyanate, rhodamine or luciferin; an enzyme, such as alkaline phosphatase, beta-galactosidase or horseradish peroxidase; an imaging agent; or a metal ion.

The kit can also include a control or reference standard and/or instructions for use thereof. In addition, the kit can include ancillary agents such as vessels for storing or transporting the detection agents and/or buffers or stabilizers.

In certain embodiments, the kit is a nucleic acid array. Such an array may be used to detect viral nucleic acid sequences in a biological sample. An array may be comprised of a substrate having disposed thereon probes of the disclosure capable of hybridizing to the viral nucleic acid sequences of the disclosure.

Several substrates suitable for the construction of arrays are known in the art. The substrate may be a material that may be modified to contain discrete individual sites appropriate for the attachment or association of the nucleic acid and is amenable to at least one detection method. Alternatively, the substrate may be a material that may be modified for the bulk attachment or association of the nucleic acid and is amenable to at least one detection method. Non-limiting examples of substrate materials include glass, modified or functionalized glass, plastics (including acrylics, polystyrene and copolymers of styrene and other materials, polypropylene, polyethylene, polybutylene, polyurethanes, TeflonJ, etc.), nylon or nitrocellulose, polysaccharides, nylon, resins, silica or silica-based materials including silicon and modified silicon, carbon, metals, inorganic glasses and plastics. In an embodiment, the substrates may allow optical detection without appreciably fluorescing.

A substrate may be planar, a substrate may be a well, i.e. a 1534-, 384-, or 96-well plate, or alternatively, a substrate may be a bead. Additionally, the substrate may be the inner surface of a tube for flow-through sample analysis to minimize sample volume. Similarly, the substrate may be flexible, such as a flexible foam, including closed cell foams made of particular plastics. Other suitable substrates are known in the art.

The nucleic acid or biomolecules may be attached to the substrate in a wide variety of ways, as will be appreciated by those in the art. The nucleic acid may either be synthesized first, with subsequent attachment to the substrate, or may be directly synthesized on the substrate. The substrate and the nucleic acid may both be derivatized with chemical functional groups for subsequent attachment of the two. For example, the substrate may be derivatized with a chemical functional group including, but not limited to, amino groups, carboxyl groups, oxo groups or thiol groups. Using these functional groups, the nucleic acid may be attached using functional groups on the biomolecule either directly or indirectly using linkers.

The nucleic acid may also be attached to the substrate non-covalently. For example, a biotinylated nucleic acid can be prepared, which may bind to surfaces covalently coated with streptavidin, resulting in attachment. Alternatively, a nucleic acid or nucleic acids may be synthesized on the surface using techniques such as photopolymerization and photolithography. Additional methods of attaching biomolecules to arrays and methods of synthesizing biomolecules on substrates are well known in the art, i.e. VLSIPS technology from Affymetrix (e.g., see U.S. Pat. No. 6,566,495, and Rockett and Dix, Xenobiotica 30(2):155-177, each of which is hereby incorporated by reference in its entirety).

In one embodiment, the nucleic acid or nucleic acids attached to the substrate are located at a spatially defined address of the array. Arrays may comprise from about 1 to about several hundred thousand addresses. A nucleic acid may be represented more than once on a given array. In other words, more than one address of an array may be comprised of the same nucleic acid. In some embodiments, two, three, or more than three addresses of the array may be comprised of the same nucleic acid. In certain embodiments, the array may comprise control nucleic acids and/or control addresses. The controls may be internal controls, positive controls, negative controls, or background controls.

Furthermore, the nucleic acids used for the array may be labeled. One skilled in the art understands that the type of label selected depends in part on how the array is being used. Suitable labels may include fluorescent labels, chromagraphic labels, chemi-luminescent labels, FRET labels, etc. Such labels are well known in the art.

EXAMPLES

The following examples are included to demonstrate preferred embodiments of the invention. It should be appreciated by those of skill in the art that the techniques disclosed in the examples that follow represent techniques discovered by the inventors to function well in the practice of the invention, and thus can be considered to constitute preferred modes for its practice. However, those of skill in the art should, in light of the present disclosure, appreciate that many changes can be made in the specific embodiments which are disclosed and still obtain a like or similar result without departing from the spirit and scope of the invention.

Introduction to the Examples

High-throughput, massively parallel nucleotide sequence analysis has made in-depth studies of the human microbiome feasible. Thus far, most microbiome studies have focused on bacteria, although some include fungi. Viruses are particularly understudied, in part due to the challenges of assessing their presence in clinical samples. Viruses as a group have highly variable genomes, with no gene shared among all viruses that can be surveyed by an amplicon-based sequencing strategy. Therefore, studies of viruses based on nucleotide sequencing require a metagenomic approach. Metagenomic shotgun sequencing (MSS) is a relatively unbiased, culture-independent method in which nucleic acid extracted from a sample is sequenced. Sequence reads are classified based on similarity to reference genomes. This approach allows comprehensive study of the viral component of the microbiome (the virome) and has led to the discovery of novel viruses and the characterization of viruses present in healthy and sick people. When adequate numbers of sequence reads are generated, viruses can be characterized with regard to taxonomy and the presence of genes associated with virulence and resistance to antiviral drugs.

A limitation of MSS as employed to date for virus detection is that the amount and proportion of viral nucleic acid in samples from humans may be very low, and in these cases, few viral sequences are generated. In our experience using MSS, we have detected fewer than 10 viral sequences per 25 million sequence reads generated for a virus that was detected in a sample by a molecular assay. In other instances, we have failed to detect viruses known to be present based on molecular assays. These difficulties may reflect the small genome size of some viruses and/or low levels of virus in the sample. This can be a particular problem for studies of the virome of healthy, asymptomatic individuals, in whom virus levels may be low. In efforts to increase the sequence yield, purification or enrichment procedures have been employed, including low-speed centrifugation and/or filtration to remove bacterial and host cells, sample treatment with nucleases to digest nucleic acid not protected within virions, or concentration of viral particles by high-speed gradient centrifugation (for review, see Duhaime and Sullivan 2012). Each of these procedures may bias against detection of some viruses (Breitbart and Rohwer 2005; Young et al. 2014).

An alternative method for enrichment of viral sequences in a metagenomic sample prior to sequencing is targeted sequence capture. Our aim was to develop a comprehensive viral targeted sequence capture panel that could be used to (1) assess all viruses known to infect vertebrate cells and (2) detect divergent viruses. To this end, we created ViroCap, a targeted sequence capture panel that enhances the detection of a comprehensive set of viruses with vertebrate hosts. Here we describe the first application of ViroCap to enrich a broad range of viruses from human clinical samples.

Example 1. Analysis of Clinical and Research Samples with ViroCap

ViroCap includes targets from 34 viral families, comprising 190 annotated viral genera and 337 species (FIG. 1). Included viruses represent all DNA and RNA viruses with sequenced genomes from vertebrate hosts, except human endogenous retroviruses, which were excluded due to their prevalence within the human genome. Nearly 1 billion bp of viral genome sequences were condensed into <200 million bp of targets (Table 3) using k-mer and clustering analyses to define a unique set of reference sequences, as described in the Methods.

We evaluated the effectiveness of detecting DNA and RNA viruses in MSS data compared with ViroCap targeted sequence capture data in two sets of human samples. In experiment 1, the sample set consisted of clinical samples that had been found to be positive by molecular tests in the Diagnostic Virology Laboratory at St. Louis Children's Hospital. Nucleic acid extracts available in the Virology Laboratory were pooled, and a sequencing library was prepared from this pooled nucleic acid (see Methods). In experiment 2, eight patient samples from a research study of young children with fever (Colvin et al. 2012; Wylie et al. 2012) were selected for use in the present study because each had been found to be positive for one or more viruses when tested by batteries of PCR assays used in that study. Individual sequencing libraries were prepared from each of the eight samples as described in the Methods and pooled for sequencing. Experiments 1 and 2 were analyzed in separate sequencing runs. In each experiment, sequencing libraries were divided, and the same library was sequenced without targeted sequence capture (precapture) and following targeted sequence capture using ViroCap (post-capture).

In experiment 1, we detected 10 viruses in the precapture MSS data (Table 1). After targeted sequence capture using the same sequencing library, we detected the same 10 viruses plus four additional viruses. Targeted sequence capture resulted in dramatic improvements in all sequence coverage metrics (Table 1; Table 4), including number and percentage of viral reads, breadth and depth of coverage, and coverage gaps. In experiment 1, the median increase in percentage of viral reads was 674 (range, >13-9335), and the median breadth of coverage increased from 2.1% (range, 0%-89.8%) to 83.2% (range, 0.8%-100%). Illustrative examples are shown in FIG. 2A, FIG. 2B, FIG. 2C, FIG. 2D.

In experiment 2, 11 viruses were detected in the precapture MSS data (Table 2). After targeted sequence capture with ViroCap using the same sequencing libraries, we detected those 11 viruses plus seven additional viruses. Thus, in the two experiments together, the number of viruses detected went from 21 to 32, a 52% increase. All of the viruses detected in both experiments were confirmed by PCR assays except for a torque teno virus in the clinical pool, which was not evaluated by PCR (Table 1, Table 8, Table 9). Viruses detected encompassed 19 genera from 10 families (FIG. 4A, FIG. 4B). In experiment 2, we again found that targeted sequence capture resulted in dramatic improvements in sequencing parameters. In experiment 2, the median fold increase in percentage of viral reads was 296 (range, >56-2722), and the median breadth of coverage increased from 2.0% (range, 0%-99.9%) to 75.6% (range, 13.5%-100%). Illustrative examples are shown in FIG. 2E, FIG. 2F, FIG. 2G, FIG. 2H.

By use of targeted sequence capture, >80% breadth of coverage of the viral genomes was obtained for 16 of 32 viruses, including diverse DNA and RNA genomes of sizes ranging from 5-161 kb (Table 1, Table 2, Table 4, Table 5). Greater than 90% breadth of coverage was obtained for 12 of 32 viruses, and eight viruses had 100% coverage. Precapture, the median gap size in genome coverage was 1704 bp (range 4-152,261 bp), and post-capture, the median gap size was 82 bp (range 0-13,734 bp) (Table 4, Table 5). High genome representation was obtained for multiple viruses in the same capture reaction, as experiments 1 and 2 were each single, independent capture reactions encompassing multiple samples (see Methods).

Example 2. Targeted Sequence Capture Identifies Divergent Viral Sequences

To determine whether or not divergent sequences could be identified using targeted sequence capture, we tested ViroCap on samples containing anelloviruses, a highly divergent group of ssDNA viruses that have a common genome structure but may have up to 30%-50% nucleotide sequence diversity among separate species (Ninomiya et al. 2007; de Villiers et al. 2011). We selected anellovirus-positive samples that we had previously characterized using multistrand displacement amplification followed by high-throughput sequencing. After assembling the precapture sequences to generate contiguous sequences (contigs), we identified anellovirus contigs >1 kb in length. The contigs had varying degrees of similarity to the reference genomes used in the ViroCap panel based on BLAST alignments, ranging from 58%-98% nucleotide sequence identity for the top high-scoring segment pair (HSP) alignment (FIG. 3A; Table 6). All of the contigs assembled using the precapture sequence data were also detected post-capture. The contig with 58% identity to the reference database was missing 13% of its length post-capture (FIG. 3A). The contig with the next lowest percentage identity to the reference database (62%) was fully sequenced (i.e., 100% breadth-of-coverage) (FIG. 3A, FIG. 3B). FIG. 3B illustrates the nucleotide sequence matches/mismatches between the contig and the most similar reference genome in the sequences used for the ViroCap design. These results demonstrate that targeted sequence capture using the ViroCap panel allows us to identify variant virus sequences having as low as 58% nucleotide sequence identity.

Example 3. Specificity of Targeted Sequence Capture

In order to determine whether ViroCap systematically enriched off-target sequences, we compared the filtering and classification statistics of the nonviral sequences in the precapture MSS and targeted sequence capture data (Table 7, FIG. 5, FIG. 6). If our probes were specific, we would not observe any systematic enrichment of specific human chromosomes or bacterial genomes post-capture. However, we anticipated a small amount of variation because the targeted sequence capture library had been through more sample handling in the form of incubations, dilutions, and amplifications. We found that the proportions of the nonviral sequences were strongly correlated (Pearson's correlation value: r=0.9881-0.9996) (Table 7, FIG. 5). A slightly higher percentage (mean, 5.8%; median, 5%; range, 0%-10.7%) of reads aligned to nonviral reference genomes in the post-capture data compared with precapture in all but one of the samples. However, the distribution of sequences among reference genomes did not show a systematic bias. This can be seen in the conserved distribution of sequences among human chromosomes (FIG. 6).

Discussion for the Examples

We designed the ViroCap panel to enhance the sensitivity of MSS for comprehensive detection of known vertebrate viruses, as well as to detect divergent viruses that have nucleotide sequence similarities to known viruses. Here we have demonstrated that targeted sequence capture using ViroCap dramatically increases the amount of viral sequence obtained from human samples compared with conventional MSS, greatly enhancing the resolution of genomic characterization and increasing the number of viruses detected by >50%. Enhancement was demonstrated for DNA and RNA viruses from multiple diverse families. The increased sensitivity will be valuable in multiple research applications, including descriptions of the human virome, and will also improve the potential for MSS as a diagnostic tool in human and animal health.

The dramatic enrichment of viral nucleic acids present within the targeted sequence capture libraries offers important advantages. First, as we demonstrate, MSS with ViroCap can be used to generate complete or nearly complete genome sequences directly from clinical samples, including those with very low proportions of viral nucleic acid, without culturing the viruses. Availability of extensive sequence data provides the opportunity to distinguish among closely related virus subtypes or even among viral strains, which might not be distinguished by other types of assays. In the data set presented here, we demonstrated the ability to type rhinoviruses and distinguish between human herpesvirus 6B and 6A, adenovirus types A and C, and polyomaviruses JC and BK. Notably, influenza A virus was identified precapture but could only be typed as an H3N2 virus post-capture. We used ViroCap to sequence the enterovirus D68 genome directly from clinical samples, and in that work, the extensive sequence data that we obtained allowed us carry out detailed comparative analysis of closely related strains that differed at a limited number of nucleotide positions. Second, the use of ViroCap can reduce the depth of sequencing needed to detect viruses in samples. Because targeted sequence capture results in a large increase in the percentage of sequencing reads that are viral (Table 1, Table 2, Table 4, Table 5, Table 6, FIG. 2), ViroCap achieves better viral coverage while requiring the generation of fewer total sequence reads. This increased efficiency has the potential to lower sequencing costs.

An important feature of ViroCap is the tiling of capture probes across genomes, including highly conserved regions that may allow detection of genomic fragments of divergent viruses that share little overall sequence homology with known viruses. We illustrated such capability using anelloviruses containing divergent nucleotide sequence (FIG. 3). In addition, the inclusion of Genome Neighbor targets enhanced our design not only by expanding beyond the tiled Reference Sequence (RefSeq) viruses but also by adding sensitivity for genomic regions where RefSeq capture probes alone might not have captured divergent strains (see Methods). ViroCap cannot detect viruses that do not share any nucleotide sequence similarity to known viruses; however, we note that because the enrichment of viral nucleic acids occurs after sequence library construction, the uncaptured portion of the library could subsequently be sequenced for additional attempts at pathogen discovery. Furthermore, the ViroCap panel is extensible and will be updated periodically with new viral sequences as they are added to RefSeq and the Genome Neighbors databases. Updates will be publicly available through our GitHub repository (see Data Access).

There were a few genomes (fewer than 10) in the NCBI reference databases that had been cloned into bacterial vectors prior to sequencing, and the deposited viral genome sequences contained bacterial vector sequence. We were not aware of this prior to probe design, so ViroCap includes capture probes that target these sequences. This resulted in enrichment of some sequences (on average 1.1% of total nonviral reads) that were subsequently recognized by our analysis pipeline as bacterial based on nucleotide sequence alignment. In subsequent versions of ViroCap, we will filter out these bacterial vector sequences.

In the experiments reported here, we pooled sequencing libraries prior to targeted sequence capture in order to reduce cost, but we still achieved enhanced detection of multiple viruses of varying abundance. As has been reported for strategies that involve sequencing indexed, pooled libraries (Kircher et al. 2012), we observed some sample cross-contamination. This cross-contamination is recognizable when a high number of viral sequences are detected in the truly positive sample, while few sequences (<0.05% of the viral sequences in the truly positive sample) of the same virus are detected in other samples in the pool. In a clinical setting, each sample would optimally be captured and sequenced independently to reduce the possibility of sample cross-contamination. However, future methodological improvements could allow pooling of clinical specimens.

The success of viral targeted sequence capture is affected by the representation of the virus in the sequencing library. In our sample preparation, total nucleic acid extracted from the sample was reverse transcribed and randomly amplified prior to library construction (Wang et al. 2003), allowing detection of DNA and RNA viral genomes within the same sequencing experiment. The uneven sequence representation observed for some genomes (FIG. 2) is likely due in part to detection of messenger RNA, whose abundance reflects patterns of gene expression, as well as to primer biases during the reverse transcription and amplification steps. Capture hybridization may also induce bias, in that sequences that diverge from target probe sequences may be captured less efficiently than those with exact or nearly exact matches to the probe. Taken together, these data suggest that further improvement in the performance of viral targeted sequence capture may be achievable by improving efficiency of reverse transcription, amplification, and library construction, while continuing to update the ViroCap panel as new, divergent genome sequences become available.

Methods other than genome sequencing have been used for virus characterization and discovery, including Virochip, a microarray-based method for detection/genotyping of viral pathogens (Wang et al. 2002; Chen et al. 2011), and PathoChip, a microarray designed to detect viruses and other microbial pathogens (Baldwin et al. 2014). While designed to detect known viruses by means of microarray probe spotting, this technology has also shown the ability to detect emerging viruses (Wang et al. 2003; Yu et al. 2012). The primary difference between the designs of these microarrays and ViroCap targeted sequence capture is that the latter approach targets complete viral genomes while the microarrays target smaller, discrete genomic regions. The results obtained from each approach also differ significantly. The microarray approach detects the presence of a virus but does not directly provide sequence information. In contrast, MSS enhanced by ViroCap targeted sequence capture provides sequence data, sometimes covering the entire genome.

In conclusion, ViroCap greatly enhances the sensitivity of MSS for nucleotide sequence-based virus detection. To our knowledge, ViroCap represents the first effort to apply a targeted sequence capture approach to the detection of a comprehensive set of viruses. Its research applications are far reaching, allowing a new, higher-resolution view of eukaryotic DNA and RNA viruses in the microbiome. ViroCap should also help realize the potential of MSS as a clinical diagnostic tool that can simultaneously detect viruses and provide immediate characterization, including taxonomic assignment, strain typing, virulence characteristics, and anti-viral drug resistance genotyping. ViroCap could also be modified into a tool for broader pathogen identification, which might include a comprehensive set of human pathogens: genes from viruses, bacteria (e.g., toxin genes, antibiotic resistance genes), fungi, protists, and other microbes.

Methods for the Examples

Taxonomy selection: At the time, we designed the ViroCap panel, NCBI GenBank had available for download a total of ˜1 Gb of sequence representing 440 viral families, well beyond the 200 Mb of target space supported by the custom SeqCap EZ library format (NimbleGen). Therefore, we developed the following approach for selecting representative targeted sequence capture probes. Because we were interested in studying viral diseases of humans, we excluded bacteriophages and endogenous human retroviruses. We also specifically did not include references from the following NCBI viral reference genome database host categories: algae, archaea, bacteria, diatom, environment, fungi, invertebrates, plants, and protozoa. After filtering, our target list contained reference sequences from the following host categories: human, vertebrates, and “unknown.” This list included viruses that could have both vertebrate and invertebrate hosts, such as vertebrate viruses with insect vectors. Based on these broad viral-host categories, we downloaded all of the associated viral reference sequences in each chosen category from NCBI (accessed Feb. 3, 2014). These sequences comprise the core reference database from which our capture library is designed. Our capture library includes targets from 34 viral families composed of 190 annotated viral genera and 337 species (FIG. 1; Supplemental Tables S6, S7 of Wylie et al., Enhanced virome sequencing using targeted sequence capture. Genome Res 2015; 24(12): 1910-20, the disclosure of which is hereby incorporated by reference in its entirety, including all supplemental information and zip files associated with the publication). Sources of viral sequences include complete representation of the viral genomes from NCBI's RefSeq collection, complementary representation of unique regions from Genome Neighbor targets, selected representation of NCBI Influenza Virus Resource sequences, and the entirety of the probe space represented on the Virochip microarray (Yu et al. 2012), GEO accession number GPL15905. The methods used to consolidate these database sequences follow.

RefSeq: NCBI's RefSeq (www.ncbi.nlm.nih.gov/refseq/) genome collection is a database of taxonomically diverse entries representing comprehensive, well-annotated genome sequences (Pruitt et al. 2014; Tatusova et al. 2014). As RefSeq entries are the most complete sequence representatives in terms of annotation and metadata consistency, we targeted selected viral RefSeqs by tiling of targeted sequence capture probes across the entire length of each RefSeq's genome, with the intention of capturing the entire viral genome. For our capture library, RefSeq nucleotide FASTA sequences were downloaded for desired viral-host categories (human; vertebrates; vertebrates, human; vertebrates, invertebrates; vertebrates, invertebrates, human; invertebrates, vertebrates; unknown) using both the online NCBI taxonomy viewer (www.ncbi.nlm.nih.gov/genomes/GenomesGroup.cgi?opt=virus&taxid=10239), as well as the RefSeq-specific FTP site (ftp.ncbi.nlm.nih.gov/refseq/release/viral). Entries were merged to avoid redundancy. RefSeq targets were pooled with the other sequence candidates (see Design Consolidation). A total of 1456 RefSeq FASTA entries (26.9 Mb) representing 190 viral genera were completely tiled for inclusion in the ViroCap library, accounting for 13.5% of the total capture library's target space.

Genome Neighbors: While RefSeq entries are single, canonical species representations, other complete or partial viral sequences also exist in DDBJ/EMBL/GenBank. In the case of viral sequences, there is extensive redundancy in these databases due to the large number of similar viral strains, isolates, and mutants. Therefore, non-RefSeq (e.g., DDBJ, EMBL, GenBank) nucleotide sequences of complete viral genomes that belong to the same species as a RefSeq sequence are classified as Genome Neighbors for that reference sequence, provided that they match all of the criteria that were used to select complete genomic sequences (Bao et al. 2004). At the time of our ViroCap panel design, Genome Neighbors (sequences downloaded from Entrez Genome link “Other genomes for species”; accessed Feb. 3, 2014) in total represented an additional 56,314 entries and 507.1 Mb of sequence, more than 2.5 times our SeqCap EZ capture target sequence space limit. Therefore, an alternative target selection approach was employed to add diversity to our RefSeq selections by selecting unique, complementary Genome Neighbor sequences.

RefSeq and Genome Neighbor sequence association: We began the process of variant sequence selection by identifying conserved regions in Genome Neighbors already represented by completely tiled RefSeq capture probes. First, we associated our viral RefSeq selections with corresponding Genome Neighbors. This was performed by downloading Genome Neighbor annotation files from NCBI (www.ncbi.nlm.nih.gov/genomes/GenomesGroup.cgi?opt=virus&taxid=10239) and associating the information with our RefSeq annotation files, by means of ad hoc Perl parsing and coupling scripts (for results, see Supplemental Tables S6, S7 of Wylie et al., Enhanced virome sequencing using targeted sequence capture. Genome Res 2015; 24(12): 1910-20, the disclosure of which is hereby incorporated by reference in its entirety, including all supplemental information and zip files associated with the publication). Once associated, the parent RefSeq sequences could be compared with related Genome Neighbor sequences to determine conserved and divergent nucleotide regions. Each viral RefSeq entry was individually reviewed, along with associated Genome Neighbor entries. FASTA sequences were collected for each RefSeq entry and its related Genome Neighbors for subsequent k-mer analysis.

K-mer analysis: Each of the Genome Neighbor sequences was split into 100-bp k-mers by means of an exhaustive 1-bp sliding window algorithm, as depicted in FIG. 7. The resultant output thus included all possible 100-bp sequences based on the combined Genome Neighbor sequence space. As our SeqCap EZ targeted sequence capture probe lengths are 100 bp, the sequences generated by the sliding window algorithm represent the total number of possible probe combinations based on the aggregate of Genome Neighbor sequences. Based on our conservative expectation of hybridization/homology at the capture probe level, we then clustered all of the Genome Neighbor 100-mers back to the parent RefSeq sequence at ≥90% sequence identity using length-sorted FASTA entries and the UCLUST (Edgar 2010) package (version 1.1.579; parameters: −rev −id 0.90). Given that all of our candidate sequences were 100 bp in length and all RefSeq entries are >100 bp, UCLUST always used the longer RefSeq as the first seed (centroid) in which to attempt folding of other sequences. As the parent RefSeq had complete probe tiling in our design, any Genome Neighbor 100-mer with ≥90% identity was considered already represented in our capture library and therefore discarded. Genome Neighbor 100-mers with <90% identity were chosen for inclusion in the capture library. As the sliding window approach produces 100-mers that overlapped one another, we merged overlapping 100-mers based on their Genome Neighbor genomic coordinates into single contiguous spans using BEDTools (Quinlan and Hall 2010) functions.

Genome Neighbor sub-sequences: Resultant subsequences were excised as FASTA entries from corresponding Genome Neighbor references using WU-BLAST's (blast.wustl.edu) xdget application and added to the ViroCap panel. These supplementary entries are easily identifiable in our final target design, as the FASTA headers for the entries list the original parent sequence ID with the excised span indicated in curly braces (e.g., gi|1249624|emb|A28090.1|HPV42 [partial] genomic sequence {SQ 2444-2644}). In this manner, for each RefSeq species, we generated Genome Neighbor subsequences from 100 bp to 21 kb in length to add to our capture panel.

These processing steps reduced the aggregate input Genome Neighbors targeted sequence space from 507.1 Mb to 153.2 Mb (Table 3), and these sequences were pooled with our other targeted capture sequence targets (see Design Consolidation). A total of 130,808 partial Genome Neighbor FASTA entries (153.2 Mb) were added for capture in our ViroCap library, accounting for 77.1% of the total capture library's target space.

Influenza Virus Resource: We obtained reference sequences from NCBI's Influenza Virus Resource database

(www.ncbi.nlm.nih.gov/genomes/FLU/FLU.html), which contains sequence data from the NIAID Influenza Genome Sequencing Project, as well as from GenBank. At the time of our capture panel design, the NCBI Influenza Virus Resource contained 305,524 influenza entries, representing 458.1 Mb of sequence. This is 17 times the size of our viral RefSeq selections and three times the size of our collapsed Genome Neighbor targets. Our selected RefSeq sequences included 29 influenza RefSeq entries (each influenza virus segment is represented as a separate entry), targeted in its entirety. These sequences served as the core of influenza reference genomes against which all other influenza sequences were compared. We directly clustered the long influenza sequences using length-sorted FASTA and the UCLUST package (version 1.1.579; parameters: −rev −id 0.90). In UCLUST, a cluster is defined by one sequence, known as the centroid or representative sequence. To lessen the computational burden and ensure that our core influenza RefSeq genomes were always the longest first seeds (centroids) in UCLUST's clustering process, we artificially concatenated the 29 parent RefSeq sequences into one linear sequence representation and then split this representation into six segments ranging in size from 18-26 kb. UCLUST preferentially seeded with the long RefSeq construct segments when clustering, ensuring that clustering was first attempted within the longer, canonical references. ULCUST was run with a requirement of ≥90% sequence identity to fold into a parent influenza RefSeq entries segment. Therefore, only sequences that (1) had <90% identity to influenza RefSeq entries and (2) were subsequent centroids in non-RefSeq clusters were chosen for inclusion in our capture panel. This process reduced the aggregate input Influenza Resource Database reference sequence from 458.1 Mb to 15.7 Mb (Table 3). Finally, supplementary influenza targets were pooled with the other sequence candidates (see Design Consolidation). A total of 9759 influenza FASTA entries (15.7 Mb) were added for targeted sequence capture in our ViroCap library, accounting for 7.9% of the total capture library's target space.

Virochip microarray: Considering the biologically important short sequence signatures represented on the Virochip panel (Yu et al. 2012), as well as the comparatively small footprint, we subsumed these sequences within our targeted sequence capture panel design. The probe sequences for the microarray are publicly available at NCBI's Gene Expression Omnibus (GEO) repository (Edgar et al. 2002). We downloaded this information for Platform GPL15905 (Viro5AG-60k) as a text file (www.ncbi.nlm.nih.govigeo/query/acc.cgi?acc=GPL15905). This platform included more than 60,000 oligonucleotides of length 60-70 bp, corresponding to 3.1 Mb of probes (Table 3). Virochip targets were pooled with the other sequence candidates (see Design Consolidation). Upon review, 1.3 Mb of the probes were already directly represented by RefSeq, Genome Neighbor, and Influenza Viral Resource sequences during capture library design and synthesis. Therefore, the remaining 25,749 (60-70 bp) Virochip FASTA entries of 1.8-Mb total size were added to ViroCap, accounting for <1% of the total targeted sequence capture panel.

Design consolidation: All of our selected candidate target sequences from RefSeq, Genome Neighbors, Influenza Virus Resource, and the Virochip microarray were combined into a single FASTA sequence file. Human endogenous retroviruses were removed from inclusion by means of a two-part process: (1) Entries were filtered by taxonomic annotation indicating human endogenous retrovirus identity, and (2) the remaining entries were BLAST-aligned to the GRCh37-lite build of the human reference genome to remove sequences with high percentage identity (≥75%) at the 100-bp probe level. Finally, sequences were hard-masked (i.e., bases converted to N′s) in low complexity regions using the DUST (R Tatusov and DJ Lipman, unpubl.) software module. The final ViroCap targeted sequence capture panel consists of 185,835 FASTA sequences totaling 198.9 Mb (see Taxonomy Selection).

NimbleGen sequence capture design: Our consolidated target sequences were submitted to Roche NimbleGen for capture library design and synthesis. As our final ViroCap design required 198.9 Mb, manufacturing was implemented under the custom NimbleGen SeqCap EZ Developer Library format, which has a maximum capture space of 200 Mb of nonhuman sequence. NimbleGen's Sequence Capture design offered up to 2.1 million of 50-105 mer sequence probes. It was at the discretion of NimbleGen, based on proprietary algorithms, to redistribute probes for better capture uniformity, redundancy, and comprehensive target base coverage. NimbleGen provided us with a proposed capture design accompanied by coordinate (GFF, BED) files and associated sequence coverage metrics. The design set contained probe representation generated by first masking all but one exact copy of each 100-mer in our original FASTA file, tiling the unmasked regions, screening the resulting probes against the (hg19) human genome, and finally selecting only those probes that had no matches in the human genome as determined by the SSAHA (Ning et al. 2001) algorithm. NimbleGen provides two metrics for assessing in silico targeted sequence capture design coverage: (1) Target bases covered with 0-bp-offset are determined by counting target bases directly represented in probe sequences, and (2) target bases covered with 100-bp-offset are determined by counting all target bases within 100 bp of a probe. The capture design provided 95.9% 0-bp-offset coverage and 99.6% 100-bp-offset coverage of our initial 198.9-Mb target request. We approved the design for capture library synthesis and received our first 12 SeqCap EZ Library reactions for in-house Illumina sequencing and analysis.

Human subjects approval and sample selection: Samples were collected under protocols approved by the Human Research Protection Office at Washington University School of Medicine (IRB protocol nos. 201106177, 201102561, and 201102045). Samples were selected to represent a broad range of viruses that are commonly encountered in the clinical laboratory and in our research studies. Viruses were identified in samples based on clinical laboratory test results in the Diagnostic Virology Laboratory at St. Louis Children's Hospital or by PCR assays and sequencing results carried out in previous studies (Colvin et al. 2012; McElvania TeKippe et al. 2012; Wylie et al. 2012). Specimens of nasopharyngeal secretions, plasma, and stool were included.

Sequencing: Total nucleic acid was extracted from clinical samples using the EasyMag NucliSENS instrument (bioMerieux). Samples were processed in one of two ways. In experiment 1, nucleic acids from clinical specimens from the Diagnostic Virology Laboratory were combined, and the resulting pooled nucleic acid was used as input for a single sequencing library (constructed as described below). These samples are designated with a sample identification prefix of “P” in the various tables and figures. Alternatively, in experiment 2, individual sequencing libraries were made from each set of eight different specimens prior to combining the libraries for sequencing. These samples are designated with a sample identification prefix of “S” in the various tables.

For sequencing libraries, DNA and RNA viruses were assessed in the same assay as previously described (Wang et al. 2003). Specifically, the RNA in the total nucleic acid was reverse transcribed with reverse transcriptase (Promega) and random nonomers tagged with a conserved sequence (5′-GTTTCCCAGTCACGATA-3′-SEQ ID NO:1) to be used for subsequent amplification (Integrated DNA Technologies), and second strand synthesis was carried out with Sequenase V2.0 DNA polymerase (Affymetrix). DNA and RNA were subsequently amplified with Accuprime Taq (Life Technologies) using the conserved sequence on the ends of the random primers, and the DNA/cDNA mixture was sheared using the Qsonica Q800R instrument (Qsonica) to generate fragments with an average length of 500 bp. Dual-indexed sequencing libraries were constructed using the KAPA low throughput library construction kit (KAPA Biosystems).

For the anellovirus samples, DNA was amplified with the Illustra Genomi Phi V2 DNA amplification kit (GE Healthcare Life Sciences); RNA was not assessed. DNA was sheared, and libraries were constructed from each sample as described above. Sequencing libraries were pooled.

In each case, the libraries were divided, and part was directly sequenced (precapture) and part was subjected to targeted sequence capture with the custom ViroCap probes prior to sequencing (post-capture). Targeted sequence capture was carried out according to the manufacturer's specifications. We carried out 10, 10, and 16 cycles of post-capture linker—mediated PCR for experiments 1 (pooled clinical samples), 2 (individual samples from the research study), and 3 (anellovirus samples), respectively, prior to sequencing. The number of cycles was empirically determined to be the minimum number needed to obtain a 5 nM dilution of library material for qPCR and loading. Libraries were sequenced on the Illumina HiSeq 2000 or HiSeq 2500 instrument, generating 100-bp paired-end reads.

Sequence analysis: Viral sequences were identified based on nucleotide and translated protein sequence alignment against reference genomes. The pipeline is adapted from previously described methods (Wylie et al. 2014), except that nucleotide alignments were carried out using BWA-MEM with default settings (Li and Durbin 2009). Because many similar genomes are included in the reference database, we used the initial alignment statistics for each sample to choose a single reference from each species to calculate and report coverage statistics. References were chosen based on having the highest number of reference bases covered. Sequences were realigned to the selected references with BWA-MEM for calculation of coverage statistics and comparison of samples precapture and post-capture. Sequence alignments were evaluated with SAMtools (Li 2011), and sequence coverage was determined with RefCov (gmt.genome.wustl.edu/packages/refcov/) and visualized with Plot2 (plot2doc.micw.eu). For illustrative purposes, the genome coverage panels in FIG. 2 and FIG. 3 were normalized by removing (deduplicating) reads based on identical alignment start sites using the SAMtools rmdup command. For each alignment start site, only the highest-quality read was retained for forward and reverse alignment orientations. Therefore, for the 100-bp read data shown in each coverage panel, the theoretical maximum depth is 200×.

Anellovirus contigs were assembled from the precapture sequence data using IDBA-UD (Peng et al. 2012). Contigs were aligned against the sequence database used to design the ViroCap panel using BLAST (Altschul et al. 1997) with the following parameters to detect low-similarity sequences: -G 5-E 2-r1-q-1. The percentage identity of the top HSP is reported in Table 5.

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TABLE 1 Results of metagenomic shotgun sequencing for pooled specimens before and after viral targeted sequence capture. Genome coverage Viral sequence reads Breadth of Depth Viral read coverage of coverage Virus  count^(b) (%) (mean [SD]) Sample length  Pre- Post- PVR fold Pre- Post- Pre- Post- Virus^(a) ID (bp)  capture^(c) capture^(d) increase^(e) capture capture capture capture Human P1 34,794 5 8103 1300 0.9 83.6 <0.1 (0.1) 19.3 (52.7) adenovirus B, type 35 Human P2 5299 110 15,277 111 68.6 100.0 1.8 (2.0) 251.1 (122.1) bocavirus 1 Influenza A P3 13,267 4 46,540 9335 2.4 74.0 <0.1 (0.3) 263.0 (394.4) virus (H3N2) Influenza B P4 14,452 0 513 >513^(f) 0 9.8 0 2.6 (0.7) virus Human P5 5596 1867 474,849 204 89.8 100.0 28.8 (17.9) 7,367.9 (4,193.0) parvovirus B19 Norovirus GII-4 P6 7560 72 527,656 5,880 46.5 98.4 0.8 (1.1) 5,870.4 (8,194.3) Parechovirus 1 P7 7339 0 13 >13^(f) 0 8.0 0 0.2 (0.6) BK P8 5142 1 1520 1220 1.6 88.6 <0.1 (0.1) 24.9 (32.2) polyomavirus JC P9 5121 5 2760 443 8.6 98.5 0.1 (0.3) 46.3 (54.0) polyomavirus Human P10 7134 8 9624 965 8.8 82.9 0.1 (0.3) 115.9 (170.3) rhinovirus 15 Human respiratory P11 15,283 9 67,778 6042 3.0 89.5 <0.1 (0.3) 350.1 (1,667.2) syncytial virus, type B Human P12 152,261 0 14 >14^(f) 0 0.8 0 <0.1 (0.1) herpesvirus 1 Torque teno P13 3260 1 447 447 1.78 60.74 0.02 (0.13) 10.4 (23.4) virus Human P14 125,030 0 834 >834^(f) 0 8.33 0 0.6 (3.5) herpesvirus 3 Precapture indicates metagenomic shotgun sequencing without targeted sequence capture; post-capture, metagenomic shotgun sequencing using (ViroCap) targeted sequence capture. ^(a)Viruses listed were incorporated into a viral pool that was subjected to MSS without and with targeted sequence capture, as described in the text. ^(b)Viral reads per million sequences generated precapture and post-capture are statistically different (P < 0.0001, Wilcoxon test). ^(c)MSS of the virus pool without targeted sequence capture yielded 7,458,192 total reads. ^(d)MSS of the virus pool after targeted sequence capture yielded 9,295,438 total reads. ^(e)PVR (percentage viral reads) fold increase indicates percentage of post-capture viral reads divided by percentage of precapture viral reads. ^(f)PVR fold increase could not be calculated because the number of precapture reads was 0.

TABLE 2 Results of metagenomic shotgun sequencing for individual specimens before and after viral targeted sequence capture. Genome coverage Viral sequence reads Depth of Total reads Viral read Breadth of coverage Virus count^(a) coverage (%) (mean [SD]) Sample Pre-   Post-   Virus(es) length Pre- Post- PVR fold Pre- Post- Pre- Post- Sample type ID capture  capture  detected (bp) capture capture increase^(b) capture capture capture capture Naso- S1 4,202,474 16,080,640 Torque teno 2736 0 231 >231^(e) 0 74.4 0 5.2 (7.6) pharyngeal virus swab Human 35,269 15,116 7,703,787 133 89.6 100.0 36.1 19,097.4 adenovirus (213.8) (17,285.5) B, type3 Naso- S2 5,087,234 3,713,962 TTV-like mini 2912 0 249 >249^(c) 0 37.5 0 6.4 (18.1) pharyngeal virus isolate swab Human 36,002 87 116,502 1,834 15.3 100.0 0.2 283.1 adenovirus (0.6) (422.3) C, type 1 Naso- S3 5,139,462 4,094,568 Torque teno 2908 0 256 >256^(c) 0 22.7 0 6.4 (21.8) pharyngeal mini virus swab Human 15,462 172 262,806 1,918 39.5 99.9 1.0 1,462.1 parainfluenza (1.6) (1,767.0) virus 3 Naso- S4 6,124,424 5,659,554 TTV-like mini 2915 1 887 960 2.8 13.5 <0.1 23.9 pharyngeal virus isolate (0.2) (105.7) swab Human 5543 4419 460,617 113 95.4 100.0 68.3 7,294.7 bocavirus 1 (94.1) (3,443.1) Naso- S5 9,152,970 5,834,446 Torque teno 3741 0 56 >56^(c) 0 14.9 0 1.0 (3.2) pharyngeal virus swab Naso- S6 10,179,884 12,064,068 Human 35,264 0 1071 >1071^(c) 0 75.3 0 2.6 (2.8) pharyngeal adenovirus swab B, type 3A KI 5040 1034 411,173 336 83.4 100.0 18.4 7,373.2 polyomavirus (20.5) (7,123.3) Human 7138 19,232 3,120,184 137 65.0 75.9 238.2 39,218.6 rhinovirus 80 (313.2) (102,545.7) Stool S7 3,691,496 4,104,534 Human 36,006 3 9081 2,722 0.8 99.9 <0.1 22.9 (25.7) adenovirus (0.1) C, type 1 Sapovirus 7429 33 61,982 1,689 23.3 100.0 0.4 740.1 (0.8) (437.6) Human 6816 6,641 1,140,900 155 99.9 100.0 85.1 14,725.6 astrovirus 1 (135.6) (13,370.2) Human 4939 0 81 >81^(c) 0 70.4 0 1.6 (1.6) polyomavirus 10 Plasma S8 10,875,448 7,088,360 Torque teno 3880 0 1817 >1817^(c) 0 38.2 0 37.0 virus (105.0) Human 161,573 38 27,523 1111 1.1 38.4 <0.1 14.2 herpesvirus (0.2) (112.9) 6B Precapture indicates metagenomic shotgun sequencing without targeted sequence capture; post capture, metagenomic shotgun sequencing using (ViroCap) targeted sequence capture. ^(a)Viral reads per million sequences generated precapture and post-capture are statistically different (P = 0.0002, Wilcoxon test). ^(b)PVR fold increase indicates percentage of post-capture viral reads divided by percentage of precapture viral reads. ^(c)IPVR fold increase could not be calculated because the number of precapture reads was zero.

TABLE 3 Viral reference genome database size representation in the ViroCap targeted sequence capture panel. Viral sequence representation (Mb) Before targeted After targeted Reference sequence sequence sequence Fold database selection selection reduction NCBI RefSeq 26.9 26.9 0^(‡) NCBI Genome 507.1 153.2  3.3 Neighbors NCBI Influenza Viral 458.1 15.7 29.2 Resource Virochip microarray 4.2 3.1  1.4 996.3 198.9 5  Sources of viral sequences included in the ViroCap panel include the complete representation of the viral genomes from NCBI's Reference Sequence (RefSeq) collection, complementary representation of unique regions from Genome Neighbor targets, selected representation of NCBI Influenza Virus Resource sequences, and the entirety of the probe space represented on the Virochip microarray (Guixia Yu et al. 2012), GEO accession number GPL15905 ^(‡)Fold reduction is 0 because reference genomes were completely targeted.

TABLE 4 Genome coverage results based on metagenomic shotgun sequencing before and after viral targeted sequence capture. Virus Sample Sample length GenBank GenBank ID type Virus (bp) GenBank defintion version GI P1 pooled Human adenovirus 34794 Human adenovirus type 35 strain Holden AY128640.2 GI:38196041 B, type 35 P2 pooled Human bocavirus 5299 Human bocavirus DNA, strain: JP0006-077 AB481073.1 GI:223670841 1 P3 pooled Influenza A virus 2341 Influenza A virus (A/New York/392/2004(H3N2)) NC_007373.1 GI:73919059 (H3N2) segment 1 P4 pooled Influenza B virus 2204 Influenza B virus RNA-3 NC_002206.1 GI:8486150 P5 pooled Human parvovirus 5596 Human parvovirus B19 NC_000883.2 GI:356457872 B19 P6 pooled Norovirus GII-4 7560 Norovirus Hu/GII.4/Armidale/NSW3901/2008/AU GQ845369.3 GI:374674593 P7 pooled Parechovirus 1 7339 Current classification: Parechovirus 1 (Former name: LQ2971.1 GI:323688 Echovirus 22 lAB, 1C, 1D, 2A, 2B, 2C, 3A, 3B, 3C, 3D proteins RNA) P8 pooled BK polyomavirus 5142 BK polyomavirus DNA, isolate: KEN-1 AB263926.1 GI:119926680 P9 pooled JC polyomavirus 5121 JC virus DNA isolate:N4 AB048554.1 GI:15823368 P10 pooled Human rhinovirus 7134 Human rhinovirus 15 DQ473493.1 GI:95102501 15 P11 pooled Human respiratory 15283 Human respiratory syncytial virus strain NH1067 JQ582844.1 GI:384872840 syncytial virus, type B P12 pooled Human 152261 Human herpesvirus 1 NC_001806.1 GI:9629378 herpesvirus 1 P13 pooled Torque teno virus 3260 Torque teno virus strain SIA109 FJ426280.1 GI:217416834 P14 pooled Human 125030 Human herpesvirus 3 strain 36 DQ479958.1 GI:94482166 herpesvirus 3 S1 single Torque teno virus 3736 Torque teno virus 7 NC_014080.1 GI:295413954 S1 single Human adenovirus 35269 Human adenovirus B strain Guangzhou02 DQ105654.4 GI:93308305 B, type 3 S2 single TTV-like mini virus 2912 TTV-like mini virus isolate TTMV_LY1 NC_020498.1 GI:470457049 isolate S2 single Human adenovirus 36002 Human adenovirus C strain JX173086.1 GI:406679291 C, type 1 human/USA/VT13862/2004/1[P1H1F1] S3 single Torque teno mini 2908 Torque teno mini virus 5 NC_014089.1 GI:295441877 virus S3 single Human parainfluenza virus 15462 Human parainfluenza virus 3 strain ZHYMgz01 EU326526.1 GI:163866863 3 S4 single TTV-like mini virus 2915 TTV-like mini virus isolate TTMV_LY3 JX134046.1 GI:459958124 isolate S4 single Human bocavirus 5543 Human bocavirus isolate Salvador1 JQ923422.1 GI:404159467 1 S5 single Torque teno virus 3741 Torque teno virus, isolate tth21 AJ620217.1 GI:49202965 S6 single Human adenovirus 35264 Human adenovirus B strain JX423380.1 GI:402173169 B, type 3A human/USA/ak32_AdV3a/2004/3[P3H3F3] S6 single KI polyomavirus 5040 K1 polyomavirus Stockholm 380 EF127908.1 GI:124366193 S6 single Human rhinovirus 7138 Human rhinovirus 80 strain ATCC VR-1190 FJ445156.1 GI:217316442 80 S7 single Human adenovirus 36006 Human adenovirus C strain JX173085.1 GI:406679245 C, type 1 human/USA/VT2612/2003/1[P1H1F1] S7 single Sapovirus 7429 Sapovirus Chanthaburi-74/Thailand AY646854.2 GI:380877195 S7 single Human astrovirus 6816 Human astrovirus 1 strain HQ398856.2 GI:313759913 1 Hu/Nyergesujfalu/HUN4520/2010/HUN S7 single Human 4939 Human polyomavirus 10 isolate 10ww JX262162.1 GI:394995074 polyomavirus 10 S8 single Torque teno virus 3880 Torque teno virus, isolate TTV-HD20d (ur0746) FR751495.1 GI:339511371 S8 single Human 161573 Human herpesvirus 6B DNA, strain: HST AB021506.1 GI:4995977 herpesvirus 6B Pre-capture: Metagenomic shotgun sequencing without targeted sequence capture Standard Percent deviation of reference No. of No. of No. of Ave. Std dev of ave. Median Ave. gap of ave. Median No. of Sample bases reference covered Missing coverage coverage coverage No. of length gap length gap length reads ID covered^(a) bases bases Bases depth^(b) depth depth gaps^(c) (bp) (bp) (bp) layered P1 0.94 34794 328 34466 0.01 0.11 0 5 6893.2 6429.83 6259 5 P2 68.64 5299 3637 1662 1.79 1.98 1 20 83.1 87.51 49 110 P3 5.85 2341 137 2204 0.06 0.23 0 3 734.67 621.96 362 2 P4 0 2204 0 2204 0 NaN 0 1 2204 NaN 2204 0 P5 89.8 5596 5025 571 28.77 17.94 30 3 190.33 150.93 153 1867 P6 46.48 7560 3514 4046 0.8 1.13 0 25 161.84 162.37 128 72 P7 0 7339 0 7339 0 NaN 0 1 7339 NaN 7339 0 P8 1.58 5142 81 5061 0.02 0.12 0 2 2530.5 2000.5 2530.5 1 P9 8.59 5121 440 4681 0.09 0.28 0 6 780.17 1012.2 121 5 P10 8.8 7134 628 6506 0.09 0.31 0 8 813.25 1006.85 401 8 P11 3.04 15283 464 14819 0.04 0.27 0 6 2469.83 3426.67 985 9 P12 0 152261 0 152261 0 NaN 0 1 152261 NaN 152261 0 P13 1.78 3260 58 3202 0.02 0.13 0 2 1601 837 1601 1 P14 0 125030 0 125030 0 NaN 0 1 125030 NaN 125030 0 51 0 3736 0 3736 0 NaN 0 1 3736 NaN 3736 0 51 89.56 35269 31587 3682 36.14 213.75 6 43 85.63 145.97 45 15116 S2 0 2912 0 2912 0 NaN 0 1 2912 NaN 2912 0 S2 15.32 36002 5515 30487 0.2 0.57 0 47 648.66 1049.02 223 87 S3 0 2908 0 2908 0 NaN 0 1 2908 NaN 2908 0 S3 39.54 15462 6114 9348 0.95 1.62 0 33 283.27 444.82 108 172 S4 2.81 2915 82 2833 0.03 0.17 0 2 1416.5 1181.5 1416.5 1 S4 95.4 5543 5288 255 68.3 94.09 41 3 85 65.87 73 4419 S5 0 3741 0 3741 0 NaN 0 1 3741 NaN 3741 0 S6 0 35264 0 35264 0 NaN 0 1 35264 NaN 35264 0 S6 83.37 5040 4202 838 18.39 20.51 9 5 167.6 144.4 94 S7 99.94 6816 6812 4 85.05 135.62 24 1 4 NaN 4 6641 S7 0 4939 0 4939 0 NaN 0 1 4939 NaN 4939 0 S8 0 3880 0 3880 0 NaN 0 1 3880 NaN 3880 0 S8 1.1 161573 1771 159802 0.02 0.23 0 15 10653.47 11967.21 5510 38 Post-capture: Metagenomic shotgun sequencing using (ViroCap) targeted sequence capture Percent of Std dev of Ave. Std dev of Median reference No. of No. of No. of Ave. ave. Median No. gap ave. gap gap No. of Sample bases reference covered Missing coverage coverage coverage of length length length reads ID covered^(a) bases bases Bases depth^(b) depth depth gaps^(c) (bp) (bp) (bp) layered ΔBoC^(d) P1 83.57 34794 29076 5718 19.33 52.7 3 87 65.72 61.71 42 8103 82.63 P2 100 5299 5299 0 251.09 122.05 233 0 0 NaN 0 15277 31.36 P3 98.25 2341 2300 41 591.6 575.04 382 2 20.5 6.5 20.5 15528 92.4 P4 30.35 2204 669 1535 13.19 30.71 0 4 383.75 357.82 294 338 30.35 P5 100 5596 5596 0 7367.86 4193 7460 0 0 NaN 0 474849 10.2 P6 98.35 7560 7435 125 5870.35 8194.3 4296 4 31.25 36.18 15.5 527656 51.87 P7 7.97 7339 585 6754 0.15 0.58 0 6 1125.67 1545.22 94.5 13 7.97 P8 88.64 5142 4558 584 24.88 32.24 13 7 83.43 67.22 80 1520 87.06 P9 98.48 5121 5043 78 46.27 53.99 24 4 19.5 16.15 12 2760 89.89 P10 82.86 7134 5911 1223 115.85 170.32 40 10 122.3 121.68 83.5 9624 74.06 P11 89.45 15283 13671 1612 350.08 1667.22 30 20 80.6 96.83 43 67778 86.41 P12 0.78 152261 1189 151072 0.01 0.1 0 11 13733.8 2 13953.16 7959 0 0.78 P13 60.74 3260 1980 1280 10.41 23.43 2 10 128 139.87 51 447 58.96 P14 8.33 125030 10410 114620 0.58 3.52 0 60 1910.33 3636.15 166.5 834 8.33 S1 74.38 3736 2779 957 5.22 7.55 2 13 73.62 65.12 49 231 74.38 S1 99.98 35269 35261 8 19097.35 17285.52 13455 2 4 2 4 7703787 10.42 S2 37.5 2912 1092 1820 6.4 18.14 0 3 606.67 509.03 558 249 37.5 S2 100 36002 36002 0 283.11 422.28 114 0 0 NaN 0 116502 84.68 S3 22.66 2908 659 2249 6.44 21.77 0 3 749.67 621.73 452 256 22.66 S3 99.89 15462 15445 17 1462.12 1766.97 768 1 17 NaN 17 262806 60.35 S4 13.52 2915 394 2521 23.9 105.69 0 3 840.33 1180.63 7 887 10.71 S4 100 5543 5543 0 7294.73 3443.14 7246 0 0 NaN 0 460617 4.6 S5 14.89 3741 557 3184 1.02 3.24 0 5 636.8 507.21 716 56 14.89 S6 75.3 35264 26555 8709 2.56 2.76 2 102 85.38 113.63 41.5 1071 75.3 S6 100 5040 5040 0 7373.19 7123.25 5338 0 0 NaN 0 411173 16.63 S6 75.89 7138 5417 1721 39218.6 102545.72 1785 15 114.73 144.23 61 3120184 10.94 S7 99.87 36006 35960 46 22.92 25.7 17 4 11.5 12.99 4 9081 99.1 S7 99.95 7429 7425 4 740.14 437.61 682 1 4 NaN 4 61982 76.69 S7 100 6816 6816 0 14725.63 13370.21 9613.5 0 0 NaN 0 1140900 0.06 S7 70.42 4939 3478 1461 1.57 1.57 1 19 76.89 57.73 70 81 70.42 S8 38.17 3880 1481 2399 36.98 104.85 0 9 266.56 261.22 131 1817 38.17 S8 38.4 161573 62045 99528 14.24 112.94 1 351 283.56 467.84 148 27523 37.3 NA: Not applicable; NaN: Not a number a Breadth-of coverage as a percent of total reference length (No. of covered bases divided by No. of reference bases). b Mean depth-of coverage across the reference length; calculated across all positions in the reference, whether covered or uncovered. c Number of gapped (uncovered) areas in context of the reference sequence. d+42 BoC: Breadth of-coverage change calculated by subtracting percent of reference bases covered, targeted sequence capture- metagenomic shotgun sequencing.

TABLE 5 Segment-level genome coverage results for influenza A and B based on metagenomic shotgun sequencing before and after viral targeted sequence capture. Pre- % of No. or ref of Std dev Std dev Median post- bases refer- No. of No. of Ave. of ave. Median No. Ave. gap gap gap No. of cap- GenBank cover- ence covered Missing coverage coverage coverage of length length length reads ture defintion ed^(a) bases bases Bases depth^(b) depth depth gaps^(c) (bp) (bp) (bp) layered Influenza A (sample P3, pre-capture) Pre- Influenza A 5.85 2341 137 2204 0.06 0.23 0 3 734.67 621.96 362 2 cap- virus H3N2 ture segment 1 (NC_007373.1) Pre- Influenza A 0 2341 0 2341 0 NaN 0 1 2341 NaN 2341 0 cap- virus H3N2 ture segment 2 (NC_007372.1) Pre- Influenza A 8.28 2233 185 2048 0.08 0.28 0 3 682.67 605.98 525 2 cap- virus H3N2 ture segment 3 (NC_007371.1) Pre- Influenza A 0 1762 0 1762 0 NaN 0 1 1762 NaN 1762 0 cap- virus H3N2 ture segment 4 (NC_007366.1) Pre- Influenza A 0 1566 0 1566 0 NaN 0 1 1566 NaN 1566 0 cap- virus H3N2 ture segment 5 (NC_007369.1) Pre- Influenza A 0 1467 0 1467 0 NaN 0 1 1467 NaN 1467 0 cap- virus H3N2 ture segment 6 (NC_007368.1) Pre- Influenza A 0 1027 0 1027 0 NaN 0 1 1027 NaN 1027 0 cap- virus H3N2 ture segment 7 (NC_007367.1) Pre- Influenza A 0 890 0 890 0 NaN 0 1 890 NaN 890 0 cap- virus H3N2 ture segment 8 (NC_007370.1) 2.36% 13627 322 13305 0.0175 0.255 0 12 1308.7925 613.97 1242.5 4 Influenza A (sample P3, post-capture) Post- Influenza A 98.25 2341 2300 41 591.6 575.04 382 2 20.5 6.5 20.5 15528 cap- virus H3N2 ture segment 1 (NC_007373.1) Post- Influenza A 68.56 2341 1605 736 158.84 327.77 6 3 245.33 158.49 169 4243 cap- virus H3N2 ture segment 2 (NC_007372.1) Post- Influenza A 90.82 2233 2028 205 405.08 444.68 217 2 102.5 41.5 102.5 10482 cap- virus H3N2 ture segment 3 (NC_007371.1) Post- Influenza A 94.32 1762 1662 100 79.31 92.95 40 3 33.33 27.78 20 1602 cap- virus H3N2 ture segment 4 (NC_007366.1) Post- Influenza A 56.13 1566 879 687 254.47 437.74 2 5 137.4 216.83 33 4469 cap- virus H3N2 ture segment 5 (NC_007369.1) Post- Influenza A 97.82 1467 1435 32 614.1 881.33 137 3 10.67 4.64 9 10211 cap- virus H3N2 ture segment 6 (NC_007368.1) Post- Influenza A 0 1027 0 1027 0 NaN 0 1 1027 NaN 1027 0 cap- virus H3N2 ture segment 7 (NC_007367.1) Post- Influenza A 19.66 890 175 715 0.46 1.11 0 3 238.33 232.54 132 5 cap- virus H3N2 ture segment 8 (NC_007370.1) 74.00% 13627 10084 3543 262.9825 0.1586 98 22 226.8825 98.3257 189.125 46540 Influenza B (sample P4, pre-capture) Pre- Influenza B 0 2368 0 2368 0 NaN 0 1 2368 NaN 2368 0 cap- virus RNA 1 ture (NC_002204.1) Pre- Influenza B 0 2313 0 2313 0 NaN 0 1 2313 NaN 2313 0 cap- virus RNA 2 ture (NC_002205.1) Pre- Influenza B 0 2204 0 2204 0 NaN 0 1 2204 NaN 2204 0 cap- virus RNA 3 ture (NC_002206.1) Pre- Influenza B 0 1882 0 1882 0 NaN 0 1 1882 NaN 1882 0 cap- virus RNA 4 ture (NC_002207.1) Pre- Influenza B 0 1841 0 1841 0 NaN 0 1 1841 NaN 1841 0 cap- virus RNA 5 ture (NC_002208.1) Pre- Influenza B 0 1557 0 1557 0 NaN 0 1 1557 NaN 1557 0 cap- virus RNA 6 ture (NC_002209.1) Pre- Influenza B 0 1191 0 1191 0 NaN 0 1 1191 NaN 1191 0 cap- virus RNA 7 ture (NC_002210.1) Pre- Influenza B 0 1096 0 1096 0 NaN 0 1 1096 NaN 1096 0 cap- virus RNA 8 ture (NC_002211.1) 0.00% 14452 0 14452 0 NaN 0 8 1806.5 NaN 1806.5 0 Influenza B (sample P4, post-capture) Post- Influenza B 0 2368 0 2368 0 NaN 0 1 2368 NaN 2368 0 cap- virus RNA 1 ture (NC_002204.1) Post- Influenza B 15.56 2313 360 1953 2.08 6.42 0 2 976.5 275.5 976.5 58 cap- virus RNA 2 ture (NC_002205.1) Post- Influenza B 30.35 2204 669 1535 13.19 30.71 0 4 383.75 357.82 294 338 cap- virus RNA 3 ture (NC_002206.1) Post- Influenza B 14.24 1882 268 1614 4.6 11.57 0 2 807 195 807 99 cap- virus RNA 4 ture (NC_002207.1) Post- Influenza B 0 1841 0 1841 0 NaN 0 1 1841 NaN 1841 0 cap- virus RNA 5 ture (NC_002208.1) Post- Influenza B 7.58 1557 118 1439 0.89 3.52 0 2 719.5 454.5 719.5 18 cap- virus RNA 6 ture (NC_002209.1) Post- Influenza B 0 1191 0 1191 0 NaN 0 1 1191 NaN 1191 0 cap- virus RNA 7 ture (NC_002210.1) Post- Influenza B 0 1096 0 1096 0 NaN 0 1 1096 NaN 1096 0 cap- virus RNA 8 ture (NC_002211.1) 9.79% 14452 1415 13037 2.595 0.6488 0 14 1172.84375 296.7109 1161.625 513 Pre-capture: Metagenomic shotgun sequencing without targeted sequence capture. Post-capture: Metagenomic shotgun sequencing using (ViroCap) targeted sequence capture. NA: Not applicable; NaN: Not a number ^(a)Breadth-of-coverage as a percent of total reference length (No. of covered bases divided by No. of reference bases). ^(b)Mean depth-of-coverage across the reference length; calculated across all positions in the reference, whether covered or uncovered. ^(c)Number of gapped (uncovered) areas in context of the reference sequence.

TABLE 6 Anellovirus contig coverage results based on metagenomic shotgun sequencing before and after viral targeted sequence capture ID Source Pre-capture read count Post-capture read count Scaffold ID Reference length (bp) Virus group A1 SMAB-348-081811 34,752,298 79,300,498 scaffold_0 1838 Anellovirus A9 SMAB-349-081111 21,501,318 25,028,624 scaffold_0 2710 Anellovirus A10 SMAB-349-081111 21,501,318 25,028,624 scaffold_1 2701 Anellovirus A11 SMAB-349-081111 21,501,318 25,028,624 scaffold_2 1514 Anellovirus A12 SMAB-349-081111 21,501,318 25,028,624 scaffold_3 1415 Anellovirus A13 SMAB-349-081111 21,501,318 25,028,624 scaffold_4 1397 Anellovirus A14 SMAB-349-081111 21,501,318 25,028,624 scaffold_5 1385 Anellovirus A15 SMAB-349-081111 21,501,318 25,028,624 scaffold_6 1055 Anellovirus A16 SMAB-349-081111 21,501,318 25,028,624 scaffold_7 1053 Anellovirus A17 SMAB-349-081111 21,501,318 25,028,624 scaffold_8 1042 Anellovirus A20 SMAB-349-081111 21,501,318 25,028,624 scaffold_11 1590 Anellovirus A48 SMAB-349-081611 34,141,152 7,187,742 scaffold_0 2991 Anellovirus A49 SMAB-349-081611 34,141,152 7,187,742 scaffold_1 2390 Anellovirus A50 SMAB-349-081611 34,141,152 7,187,742 scaffold_2 1747 Anellovirus A51 SMAB-349-081611 34,141,152 7,187,742 scaffold_3 2193 Anellovirus A52 SMAB-349-081611 34,141,152 7,187,742 scaffold_4 1040 Anellovirus A81 SMAB-349-082311 36,651,918 14,426,400 scaffold_0 3243 Anellovirus A82 SMAB-349-082311 36,651,918 14,426,400 scaffold_1 3164 Anellovirus A83 SMAB-349-082311 36,651,918 14,426,400 scaffold_2 3110 Anellovirus A84 SMAB-349-082311 36,651,918 14,426,400 scaffold_3 2923 Anellovirus A85 SMAB-349-082311 36,651,918 14,426,400 scaffold_4 2348 Anellovirus A86 SMAB-349-082311 36,651,918 14,426,400 scaffold_5 2301 Anellovirus A87 SMAB-349-082311 36,651,918 14,426,400 scaffold_6 1270 Anellovirus A88 SMAB-349-082311 36,651,918 14,426,400 scaffold_7 1247 Anellovirus A89 SMAB-349-082311 36,651,918 14,426,400 scaffold_8 1432 Anellovirus A110 SMAB-353-081611 21,184,852 11,155,204 scaffold_0 2628 Anellovirus A111 SMAB-353-081611 21,184,852 11,155,204 scaffold_1 2546 Anellovirus A112 SMAB-353-081611 21,184,852 11,155,204 scaffold_2 2334 Anellovirus A113 SMAB-353-081611 21,184,852 11,155,204 scaffold_3 1616 Anellovirus A114 SMAB-353-081611 21,184,852 11,155,204 scaffold_4 1672 Anellovirus A115 SMAB-353-081611 21,184,852 11,155,204 scaffold_5 1328 Anellovirus A116 SMAB-353-081611 21,184,852 11,155,204 scaffold_6 1116 Anellovirus A117 SMAB-353-081611 21,184,852 11,155,204 scaffold_7 1111 Anellovirus A118 SMAB-353-081611 21,184,852 11,155,204 scaffold_8 1019 Anellovirus A119 SMAB-353-081611 21,184,852 11,155,204 scaffold_9 1005 Anellovirus A149 SMAB-357-081611 21,920,676 5,402,270 scaffold_0 1290 Anellovirus A150 SMAB-357-081611 21,920,676 5,402,270 scaffold_1 1245 Anellovirus A151 SMAB-357-081611 21,920,676 5,402,270 scaffold_2 1231 Anellovirus A162 SMAB-405-092711 21,502,312 16,696,432 scaffold_0 2951 Anellovirus A163 SMAB-405-092711 21,502,312 16,696,432 scaffold_1 2736 Anellovirus A164 SMAB-405-092711 21,502,312 16,696,432 scaffold_2 2392 Anellovirus A165 SMAB-405-092711 21,502,312 16,696,432 scaffold_3 2323 Anellovirus A166 SMAB-405-092711 21,502,312 16,696,432 scaffold_4 2722 Anellovirus A167 SMAB-405-092711 21,502,312 16,696,432 scaffold_5 2166 Anellovirus A168 SMAB-405-092711 21,502,312 16,696,432 scaffold_6 2154 Anellovirus A169 SMAB-405-092711 21,502,312 16,696,432 scaffold_7 2078 Anellovirus A170 SMAB-405-092711 21,502,312 16,696,432 scaffold_8 1984 Anellovirus A171 SMAB-405-092711 21,502,312 16,696,432 scaffold_9 1751 Anellovirus A172 SMAB-405-092711 21,502,312 16,696,432 scaffold_10 1714 Anellovirus A173 SMAB-405-092711 21,502,312 16,696,432 scaffold_11 1711 Anellovirus A174 SMAB-405-092711 21,502,312 16,696,432 scaffold_12 1575 Anellovirus A175 SMAB-405-092711 21,502,312 16,696,432 scaffold_13 1550 Anellovirus A176 SMAB-405-092711 21,502,312 16,696,432 scaffold_14 1504 Anellovirus A177 SMAB-405-092711 21,502,312 16,696,432 scaffold_15 1091 Anellovirus A178 SMAB-405-092711 21,502,312 16,696,432 scaffold_16 1064 Anellovirus A179 SMAB-405-092711 21,502,312 16,696,432 scaffold_17 1041 Anellovirus A180 SMAB-405-092711 21,502,312 16,696,432 scaffold_18 1030 Anellovirus A181 SMAB-405-092711 21,502,312 16,696,432 scaffold_19 1024 Anellovirus A219 SMAB-486-011712 32,045,168 12,929,988 scaffold_0 3280 Anellovirus A220 SMAB-486-011712 32,045,168 12,929,988 scaffold_1 3230 Anellovirus A221 SMAB-486-011712 32,045,168 12,929,988 scaffold_2 3206 Anellovirus A222 SMAB-486-011712 32,045,168 12,929,988 scaffold_3 2694 Anellovirus A223 SMAB-486-011712 32,045,168 12,929,988 scaffold_4 2403 Anellovirus A224 SMAB-486-011712 32,045,168 12,929,988 scaffold_5 1346 Anellovirus A225 SMAB-486-011712 32,045,168 12,929,988 scaffold_6 1342 Anellovirus A226 SMAB-486-011712 32,045,168 12,929,988 scaffold_7 1259 Anellovirus A227 SMAB-486-011712 32,045,168 12,929,988 scaffold_8 1213 Anellovirus A228 SMAB-486-011712 32,045,168 12,929,988 scaffold_9 1135 Anellovirus Pre-capture: Metagenomic shotgun sequencing using (ViroCap) targeted sequence capture Ave. Std dev Ave. Std dev Median % of ref No. No. of No. of cover- of ave. Median No. gap ave. gap No. of bases of ref covered Missing age coverage coverage of length gap length length reads % ID covered^(a) bases bases Bases depth^(b) depth depth gaps^(c) (bp) (bp) (bp) layered Viral Reads A1 100 1838 1838 0 12248.74 12913.66 5291 0 0 NaN 0 271871 0.782310856 A9 100 2710 2710 0 38.46 22.66 40 0 0 NaN 0 1066 0.004957836 A10 98.45 2701 2659 42 18.45 10.29 18 1 42 NaN 42 505 0.002348693 A11 100 1514 1514 0 234.44 112.12 285 0 0 NaN 0 3619 0.016831526 A12 100 1415 1415 0 8.68 5.52 7 0 0 NaN 0 124 0.000576709 A13 100 1397 1397 0 9.54 5.44 9 0 0 NaN 0 135 0.000627868 A14 100 1385 1385 0 209.25 115.06 184 0 0 NaN 0 3110 0.01446423 A15 100 1055 1055 0 11.78 6.66 13 0 0 NaN 0 127 0.000590661 A16 100 1053 1053 0 11.2 6.11 10 0 0 NaN 0 120 0.000558105 A17 100 1042 1042 0 10.1 4.13 10 0 0 NaN 0 106 0.000492993 A20 100 1590 1590 0 28.07 14.76 29 0 0 NaN 0 455 0.002116149 A48 100 2991 2991 0 90.21 34.95 101 0 0 NaN 0 2747 0.008046009 A49 100 2390 2390 0 11.34 6.9 11 0 0 NaN 0 275 0.00080548 A50 99.94 1747 1746 1 60.14 31.43 60 1 1 NaN 1 1062 0.003110616 A51 99.77 2193 2188 5 116.1 73.05 114 2 2.5 1.5 2.5 2654 0.00777361 A52 100 1040 1040 0 10.25 5.19 10 0 0 NaN 0 109 0.000319263 A81 100 3243 3243 0 223.26 105.02 266 0 0 NaN 0 7420 0.020244507 A82 100 3164 3164 0 43.21 29.08 39 0 0 NaN 0 1384 0.003776064 A83 100 3110 3110 0 17.08 9.62 18 0 0 NaN 0 539 0.001470592 A84 100 2923 2923 0 25.61 44.93 19 0 0 NaN 0 813 0.002218165 A85 100 2348 2348 0 15.72 9.48 14 0 0 NaN 0 378 0.001031324 A86 100 2301 2301 0 256.54 200.42 226 0 0 NaN 0 5949 0.016231074 A87 100 1270 1270 0 362.37 248.3 372.5 0 0 NaN 0 4672 0.012746945 A88 100 1247 1247 0 9.39 3.98 9 0 0 NaN 0 117 0.000319219 A89 100 1432 1432 0 246.68 230.34 153 0 0 NaN 0 3761 0.0102614 A110 100 2628 2628 0 38.35 17.35 40 0 0 NaN 0 1022 0.004824202 A111 100 2546 2546 0 10.76 4.39 10 0 0 NaN 0 280 0.001321699 A112 100 2334 2334 0 27.37 11.34 27 0 0 NaN 0 658 0.003105993 A113 100 1616 1616 0 9.73 4.33 9 0 0 NaN 0 158 0.000745816 A114 99.94 1672 1671 1 30.06 14.42 29 1 1 NaN 1 509 0.00240266 A115 99 92 1328 1327 1 39.71 14.57 42 1 1 NaN 1 537 0.00253483 A116 100 1116 1116 0 12.86 8.16 13 0 0 NaN 0 144 0.000679731 A117 100 1111 1111 0 11.58 7.3 11 0 0 NaN 0 130 0.000613646 A118 100 1019 1019 0 5.3 2.24 6 0 0 NaN 0 56 0.00026434 A119 100 1005 1005 0 9.85 5.42 10 0 0 NaN 0 100 0.000472035 A149 100 1290 1290 0 18.25 12.6 17 0 0 NaN 0 237 0.001081171 A150 100 1245 1245 0 16.98 13.02 13 0 0 NaN 0 213 0.000971685 A151 100 1231 1231 0 5.52 3.87 4 0 0 NaN 0 69 0.000314771 A162 100 2951 2951 0 10.33 7.19 9 0 0 NaN 0 312 0.001451007 A163 100 2736 2736 0 18.7 8.15 19 0 0 NaN 0 521 0.002422995 A164 100 2392 2392 0 19.92 11.08 21 0 0 NaN 0 484 0.002250921 A165 100 2323 2323 0 54.48 30.95 67 0 0 NaN 0 1287 0.005985403 A166 100 2722 2722 0 115.96 80.55 122 0 0 NaN 0 3238 0.015058846 A167 99.86 2166 2163 3 49.71 27.65 60 1 3 NaN 3 1088 0.005059921 A168 100 2154 2154 0 88.06 55.06 95 0 0 NaN 0 1921 0.008933923 A169 100 2078 2078 0 24.78 15.07 23 0 0 NaN 0 518 0.002409043 A170 100 1984 1984 0 58.14 47.45 47 0 0 NaN 0 1168 0.005431974 A171 100 1751 1751 0 680.23 480.19 606 0 0 NaN 0 11993 0.055775398 A172 99.82 1714 1711 3 124.02 66.88 136 1 3 NaN 3 2153 0.010012877 A173 100 1711 1711 0 100.11 53.73 116 0 0 NaN 0 1731 0.008050297 A174 98.1 1575 1545 30 19.01 11.97 21 1 30 NaN 30 305 0.001418452 A175 100 1550 1550 0 14.53 7.37 13 0 0 NaN 0 231 0.001074303 A176 100 1504 1504 0 650.41 527.14 625 0 0 NaN 0 9916 0.046115971 A177 100 1091 1091 0 26.88 17.14 36 0 0 NaN 0 297 0.001381247 A178 100 1064 1064 0 19.61 14.92 16 0 0 NaN 0 218 0.001013844 A179 97.12 1041 1011 30 17.21 10.57 21 1 30 NaN 30 180 0.000837119 A180 100 1030 1030 0 14 10.33 12 0 0 NaN 0 144 0.000669695 A181 100 1024 1024 0 21.46 15.13 27 0 0 NaN 0 221 0.001027796 A219 100 3280 3280 0 318.79 234.86 325 0 0 NaN 0 10582 0.033022139 A220 100 3230 3230 0 33.84 12.88 36 0 0 NaN 0 1106 0.003451378 A221 100 3206 3206 0 68.26 47.05 62 0 0 NaN 0 2227 0.006949566 A222 100 2694 2694 0 73.69 47.87 85 0 0 NaN 0 2003 0.006250552 A223 100 2403 2403 0 23.89 12.49 27 0 0 NaN 0 585 0.001825548 A224 100 1346 1346 0 16.09 10.97 14 0 0 NaN 0 218 0.00068029 A225 98.81 1342 1326 16 28.36 20.66 21 1 16 NaN 16 387 0.00120767 A226 100 1259 1259 0 59.12 53.31 39 0 0 NaN 0 753 0.002349808 A227 100 1213 1213 0 39.08 24.64 41 0 0 NaN 0 486 0.001516609 A228 100 1135 1135 0 20.51 10.74 22 0 0 NaN 0 240 0.000748943 Post-capture: Metagenomic shotgun sequencing using (ViroCap) targeted sequence capture Std % of No. dev Me- % ref of Std dev Ave. ave. dian Viral Scaf- bases No. No. of Miss- Ave. of ave. Median No. gap gap gap No. of % Reads fold cover- of ref covered ing coverage coverage coverage of length length length reads Viral Fold ID ID ed^(a) bases bases Bases depth^(b) depth depth gaps^(c) (bp) (bp) (bp) layered Reads increase A1 scaf- 99.95 1838 1837 1 3382358.61 2960741.89 2099195 1 1 NaN 1 67437000 85.040 108.703 fold_0 A9 scaf- 100 2710 2710 0 36255.34 56024.32 14982.5 0 0 NaN 0 1065198 4.256 858.423 fold_0 A10 scaf- 100 2701 2701 0 20096.17 9868.2 18695 0 0 NaN 0 567237 2.266 964.942 fold_1 A11 scaf- 100 1514 1514 0 426553.34 130908.42 4675349.5 0 0 NaN 0 6720533 26.851 1595.303 fold_2 A12 scaf- 96.11 1415 1360 55 3160.58 9562.3 132 2 27.5 10.5 27.5 50800 0.203 351.941 fold_3 A13 scaf- 100 1397 1397 0 1686.5 3654.17 201 0 0 NaN 0 26640 0.106 169.523 fold_4 A14 scaf- 100 1385 1385 0 331418.92 143019 347953 0 0 NaN 0 4996996 19.965 1380.310 fold_5 A15 scaf- 99.91 1055 1054 1 461.97 320.02 343 1 1 NaN 1 5520 0.022 37.339 fold_6 A16 scaf- 99.91 1053 1052 1 1526.3 1159.63 1477 1 1 NaN 1 17794 0.071 127.386 fold_7 A17 scaf- 99.9 1042 1041 1 116.94 81.59 90.5 1 1 NaN 1 1358 0.005 11.006 fold_8 A20 scaf- 99.94 1590 1589 1 5521.42 2758.03 5455.5 1 1 NaN 1 90871 0.363 171.570 fold_1 A48 scaf- 100 2991 2991 0 40395.71 15366.52 40940 0 0 NaN 0 1250081 17.392 2161.550 fold_0 A49 scaf- 97.82 2390 2338 52 392.77 536.37 211 1 52 NaN 52 10560 0.147 182.397 fold_1 A50 scaf- 100 1747 1747 0 3406.15 1892.25 3457 0 0 NaN 0 61553 0.856 275.303 fold_2 A51 scaf- 100 2193 2193 0 19055.83 18186.6 14239 0 0 NaN 0 427884 5.953 765.792 fold_3 A52 scaf- 100 1040 1040 0 361.5 259.79 258 0 0 NaN 0 3905 0.054 170.169 fold_4 A81 scaf- 99.97 3243 3242 1 109940.23 71253.1 98517 1 1 NaN 1 3695472 25.616 1265.333 fold_0 A82 scaf- 100 3164 3164 0 5835.68 9786.87 1623.5 0 0 NaN 0 193401 1.341 355.027 fold_1 A83 scaf- 100 3110 3110 0 9782.48 22916.84 5727 0 0 NaN 0 349290 2.421 1646.403 fold_2 A84 scaf- 100 2923 2923 0 13611.3 67753.26 593 0 0 NaN 0 505592 3.505 1579.968 fold_3 A85 scaf- 100 2348 2348 0 675.07 1065.57 285 0 0 NaN 0 17758 0.123 119.355 fold_4 A86 scaf- 100 2301 2301 0 32221.77 36026.86 16687 0 0 NaN 0 764059 5.296 326.303 fold_5 A87 scaf- 100 1270 1270 0 94213.43 78979.25 57959 0 0 NaN 0 1223808 8.483 665.502 fold_6 A88 scaf- 87.41 1247 1090 157 229.58 430.93 39 3 52.33 36.63 72 3587 0.025 77.890 fold_7 A89 scaf- 100 1432 1432 0 182518.02 177308.43 129813 0 0 NaN 0 2826112 19.590 1909.083 fold_8 A110 scaf- 100 2628 2628 0 28688.61 15711.83 24157 0 0 NaN 0 807302 7.237 1500.144 fold_0 A111 scaf- 100 2546 2546 0 4164.39 4035.7 3192 0 0 NaN 0 120028 1.076 814.090 fold_1 A112 scaf- 99.96 2334 2333 1 9257.96 12622.85 6241.5 1 1 NaN 1 244516 2.192 705.715 fold_2 A113 scaf- 99.88 1616 1614 2 141.65 132.32 91 2 1 NaN 1 2523 0.023 30.326 fold_3 A114 scaf- 100 1672 1672 0 25072.25 19058.74 20055 0 0 NaN 0 437526 3.922 1632.428 fold_4 A115 scaf- 99.92 1328 1327 1 34536.53 16308.98 29254.5 1 1 NaN 1 469416 4.208 1660.090 fold_5 A116 scaf- 100 1116 1116 0 3013.53 2124.7 2227 0 0 NaN 0 35526 0.318 468.524 fold_6 A117 scaf- 100 1111 1111 0 11264.15 7881.43 11882 0 0 NaN 0 130883 1.173 1912.000 fold_7 A118 scaf- 99.8 1019 1017 2 126.88 107.28 108 2 1 NaN 1 1483 0.013 50.292 fold_8 A119 scaf- 99.9 1005 1004 1 672.23 554.79 501 1 1 NaN 1 7207 0.065 136.868 fold_9 A149 scaf- 99.92 1290 1289 1 264.71 233.53 145 1 1 NaN 1 4272 0.079 73.141 fold_0 A150 scaf- 99.92 1245 1244 1 10209.4 13621.97 1858 1 1 NaN 1 131870 2.441 2512.141 fold_1 A151 scaf- 100 1231 1231 0 1735.51 1021.01 1651 0 0 NaN 0 22487 0.416 1322.392 fold_2 A162 scaf- 98.75 2951 2914 37 6797.55 21769.05 450 3 12.33 8.06 17 214072 1.282 883.622 fold_0 A163 scaf- 100 2736 2736 0 2520.44 2576.55 1932 0 0 NaN 0 73026 0.437 180.510 fold_1 A164 scaf- 99.62 2392 2383 9 1404.45 3778.63 276 1 9 NaN 9 42446 0.254 112.941 fold_2 A165 scaf- 100 2323 2323 0 5554.35 5104.61 3670 0 0 NaN 0 144832 0.867 144.926 fold_3 A166 scaf- 100 2722 2722 0 63408.26 207855.91 1232 0 0 NaN 0 2548000 15.261 1013.407 fold_4 A167 scaf- 99.91 2166 2164 2 5513.19 7021.36 3490 1 2 NaN 2 124695 0.747 147.598 fold_5 A168 scaf- 100 2154 2154 0 11353.51 8844.18 9644.5 0 0 NaN 0 257501 1.542 172.629 fold_6 A169 scaf- 99.09 2078 2059 19 254.76 327.1 116 2 9.5 0.5 9.5 6422 0.038 15.966 fold_7 A170 scaf- 100 1984 1984 0 26353.3 71853.17 3449 0 0 NaN 0 659791 3.952 727.487 fold_8 A171 scaf- 100 1751 1751 0 184578.07 259159.19 68402 0 0 NaN 0 3311416 19.833 355.588 fold_9 A172 scaf- 100 1714 1714 0 18936.09 11003.95 21219 0 0 NaN 0 336384 2.015 201.211 fold_10 A173 scaf- 100 1711 1711 0 11672.08 6609.58 12586 0 0 NaN 0 207222 1.241 154.170 fold_11 A174 scaf- 100 1575 1575 0 52030.8 28720.38 66614 0 0 NaN 0 867748 5.197 3663.998 fold_12 A175 scaf- 100 1550 1550 0 119679.86 384901.96 324 0 0 NaN 0 2130790 12.762 11879.281 fold_13 A176 scaf- 100 1504 1504 0 238031.38 467196.25 22091 0 0 NaN 0 4445764 26.627 577.393 fold_14 A177 scaf- 100 1091 1091 0 2427.26 2452.27 1354 0 0 NaN 0 30619 0.183 132.769 fold_15 A178 scaf- 99.91 1064 1063 1 1392.61 1525 770 1 1 NaN 1 15820 0.095 93.457 fold_16 A179 scaf- 97.89 1041 1019 22 1052.72 724.32 844 1 22 NaN 22 11506 0.069 82.322 fold_17 A180 scaf- 100 1030 1030 0 6807.7 15349.44 306 0 0 NaN 0 87586 0.525 783.310 fold_18 A181 scaf- 96.29 1024 986 38 235.2 148.88 212 1 38 NaN 38 2962 0.018 17.261 fold_19 A219 scaf- 100 3280 3280 0 99170.62 105634.57 62587 0 0 NaN 0 3429938 26.527 803.310 fold_0 A220 scaf- 100 3230 3230 0 11741.54 5561.51 11319.5 0 0 NaN 0 390863 3.023 875.858 fold_1 A221 scaf- 100 3206 3206 0 67579.79 33956.26 63616 0 0 NaN 0 2350955 18.182 2616.306 fold_2 A222 scaf- 100 2694 2694 0 6039.02 14066.03 1075.5 0 0 NaN 0 173604 1.343 214.804 fold_3 A223 scaf- 100 2403 2403 0 4739.73 2219.1 4485 0 0 NaN 0 119472 0.924 506.145 fold_4 A224 scaf- 99.33 1346 1337 9 459.27 988.44 57 1 9 NaN 9 7976 0.062 90.676 fold_5 A225 scaf- 100 1342 1342 0 10795.11 22495.63 238 0 0 NaN 0 157737 1.220 1010.153 fold_6 A226 scaf- 98.65 1259 1242 17 13553.61 25814.24 1351 1 17 NaN 17 182082 1.408 599.289 fold_7 A227 scaf- 99.92 1213 1212 1 653.52 880.84 148 1 1 NaN 1 9074 0.070 46.273 fold_8 A228 scaf- 96.12 1135 1091 44 1600.57 2908.16 66 1 44 NaN 44 19359 0.150 199.911 fold_9 Alignment to reference genomes Bitscore of align- Percent Signifi- ment/kb ID of ID GenBank version and GI Reference description Significance length alignment A1 gi|1295413947|ref|NC_014078.1| Torque teno virus 19, complete genome 0 790 74.11 A9 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 3353 90.32 A10 gi|5616144|gb|AF122917.1| TT virus isolate JA4. complete genome 0 3740 93.15 A11 gi|1339511367|emb|FR751491.1| Torque teno virus complete genome, isolate TTV- HD19 (rheu242) 0 2184 95.51 A12 gi|295413947|ref|NC_014078.1| Torque teno virus 19. complete genome 1E−126 453 63.76 A13 gi|49203022|emb|AJ620231.1| Torque teno virus, isolate tth8. complete genome 0 876 71.24 A14 gi|7657957|dbj|AB028669.1| TT virus gene for ORF1 and ORF2. complete genome. isolate:TJN02 0 1624 92.03 A15 gi|7415914|dbj|AB038628.1| TTV-like mini virus complete genome. isdate:TLMV-CLC205 0 874 79.90 A16 gi|7415914|dbj|AB038628.1| TTV-like mini virus complete genome. isolate:TLMV-CLC205 0 919 77.89 A17 gi|49203001|emb|AJ620226.1| Torque teno virus, isolate tth4, complete genome 1E−102 375 64.84 A20 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 943 84.54 A48 gi|7657957|dbj|AB028669.1| TT virus gene for ORF1 and ORF2. complete genome. isolate:TJN02 0 3921 91.14 A49 gi|381140099|emb|FR848323.1| Torque teno virus complete genome, isolate HD11 sle2037 1E−135 484 64.49 A50 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 1798 83.23 A51 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 2122 89.05 A52 gi|17827196|dbj|AB064597.1| Torque teno virus DNA. complete genome, isolate: CT30F 1E−169 597 70.92 A81 gi|7657957|dbj|AB028669.1| TT virus gene for ORF1 and ORF2, complete genome, isolate:TJN02 0 4303 91.69 A82 gi|17827189|dbj|AB064596.1| Torque teno virus DNA. complete genome, isolate: CT25F {SQ 1-3126} 0 1220 63.94 A83 gi|149203001|emb|AJ620226.1| Torque teno virus, isolate tth4, complete genome 0 4035 90.53 A84 gi|149203001|emb|AJ620226.1| Torque teno virus, isolate tth4, complete genome 0 1440 70.50 A85 gi|381140099|emb|FR848323.1| Torque teno virus complete genome, isolate HD11 sle2037 1E−143 511 65.15 A86 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 2594 85.96 A87 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 1779 93.93 A88 gi|339511366|emb|FR751490.1| Torque teno virus complete genome, isolate TTV- HD18b (uro705) 1E−101 370 58.28 A89 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 1237 93.61 A110 gi|339511375|emb|FR751499.1| Torque teno virus complete genome, isolate TTV- HD22 (rheul 12) 0 3556 92.46 A111 gi|295441905|ref|NC_014096.1| Torque teno virus 15. complete genome 0 3418 91.98 A112 gi|I339832375|ref|NC_015783.1| Torque teno virus, complete genome 0 2326 82.40 A113 gi|1339832375|ref|NC_015783.1| Torque teno virus, complete genome 0 870 68.51 A114 gi|339832375|ref|NC_015783.1| Torque teno virus, complete genome 0 2073 95.47 A115 gi|339832375|ref|NC_015783.1| Torque teno virus, complete genome 0 1970 97.74 A116 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 1267 87.44 A117 gi|1339511369|emb|FR751493.1| Torque teno virus complete genome, isolate TTV- HD20b (uro742) 0 1356 88.48 A118 gi|381140099|emb|FR848323.1| Torque teno virus complete genome, isolate HD11 sle2037 1E−121 437 67.84 A119 gi|339832375|ref|NC_015783.1| Torque teno virus, complete genome 1E−170 599 70.81 A149 gi|1134133206|ref|NC_009225.1| Torque teno midi virus 1, complete genome 1E−111 405 64.80 A150 gi|1295441891|ref|NC_014093.1| Torque teno midi virus 2, complete genome 0 668 69.02 A151 gi|17827243|dbj|AB064604.1| Torque teno virus DNA. complete genome, isolate: CT39F 0 1233 85.50 A162 gi|1295413928|ref|NC_014076.1| Torque teno virus 10. complete genome 0 993 74.15 A163 gi|339832375|ref|NC_015783.1| Torque teno virus, complete genome 0 2624 81.00 A164 gi|58613381|gb|AY823988.1| Torque teno virus isolate 2h, complete genome 1E−104 381 65.35 A165 gi|7415914|dbj|AB038628.1| TTV-like mini virus complete genome, isolate:TLMV-CLC205 0 1239 79.72 A166 gi|58613386|gb|AY823989.1| Torque teno virus isolate 3h, complete genome 2E−83 313 88.93 A167 gi|58613386|gb|AY823989.1| Torque teno virus isolate 3h, complete genome 0 1034 78.99 A168 gi|1339511369|emb|FR751493.1| Torque teno virus complete genome, isolate TTV- HD20b <uro742) 0 1898 78.30 A169 gi|6463708|dbj|AB026930.1| TTV-like mini virus DNA, complete genome, isolate: TLMV-CBD231 1E−171 603 66.05 A170 gi|1339511375|emb|FR751499.1| Torque teno virus complete genome, isolate TTV- HD22 (rheul 12) 1E−123 446 61.87 A171 gi|381140099|emb|FR848323.1| Torque teno virus complete genome, isolate HD11 sle2037 1E−111 405 61.95 A172 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 1959 86.75 A173 gi|217416834|gb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 1848 84.69 A174 gi|156104001|emb|AM711976.1| TT virus slel957 complete genome 0 2146 94.04 A175 gi|295413928|ref|NC_014076.1| Torque teno virus 10, complete genome 0 1020 71.48 A176 gi|339511375|emb|FR751499.1| Torque teno virus complete genome, isolate TTV- HD22 (rheul 12) 1E−122 442 62.00 A177 gi|1339511369|emb|FR751493.1| Torque teno virus complete genome, isolate TTV- HD20b (uro742) 0 973 78.07 A178 gi|295441905|ref|NC_014096.1| Torque teno virus 15, complete genome 1E−151 538 67.56 A179 gi|1339511365|emb|FR751489.1| Torque teno virus complete genome, isolate TTV- HD18a (uro703) 0 698 74.47 A180 gi|1295441891|ref|NC_014093.1| Torque teno midi virus 2, complete genome 1E−141 504 62.97 A181 gi|1295441884|ref|NC_014091.1| Torque teno virus 16, complete genome 1E−106 388 63.05 A219 gi|217416834|qb|FJ426280.1| Torque teno virus strain SIA109, complete genome 0 4059 90.67 A220 gi|295441884|ref|NC_014091.1| Torque teno virus 16, complete genome 0 4352 91.49 A221 gi|49202965|emb|AJ620217.1| Torque teno virus, isolate tth21. complete genome 0 4602 94.26 A222 gi|1339511366|emb|FR751490.1| Torque teno virus complete genome, isolate TTV- HD18b (uro705) 0 686 66.00 A223 gi|17827196|dbj|AB064597.1| Torque teno virus DNA. complete genome, isolate: CT30F 0 1855 94.64 A224 gi|1295441884|ref|NC_014091.1| Torque teno virus 16, complete genome 1E−110 402 61.71 A225 gi|1134133206|ref|NC_009225.1| Torque teno midi virus 1, complete genome 0 648 68.54 A226 gi|52854167|gb|AY622909.1| Small anellovirus 2, complete genome 1E−131 472 62.89 A227 gi|295441891|ref|NC_014093.1| Torque teno midi virus 2, complete genome 1E−113 412 60.65 A228 gi|66391749|ref|NC_007013.1| Small anellovirus 1, complete genome 1E−129 464 63.36 NA: Not applicable: NaN: Not a number

TABLE 7 Non-viral read classification based on metagenomic shotgun sequencing before and after viral targeted sequence capture. Non-viral red filtering Non-viral read identitities % of reads % of % of % of % of passing mask reads passing capture % of % of total non- Pre- or % viral Total reads passing and adaptor mask, adaptor, and positive bacterial & % of NCBInt viral reads Virus(es) post- Total reads (viral non-viral mask filter filters technical filters control reads fungal reads human reads reads mapped Sample type Sample ID detected capture reads read count) reads (read count) (read count) (read count) (read count) (read count) (read count) (read count)^(b) (read count) Naso- S1 Torque Pre- 4,202,474 0.4% 4,187,358 83.7% 79.7% 79.1% 0% 12.4% 76.8% 1.7% 90.9% pharyngeal teno virus; capture (15,116) (3,503,645) (3,336,097) (3,314,130) (0) (409,536) (2,543,675) (57,503) (3,010,714) swab Human Post- 16,080,640 47.9% 8,376,622 84.6% 81.3% 80.5% <0.1% 9.7% 83.6% 1.5% 94.8% adenovirus capture (7,704,018) (7,084,765) (6,813,094) (6,746,513) (286) (656,181) (5,638,382) (99,944) (6,394,793) B, type 3 Naso- S2 TTV-like Pre- 5,087,234 <0.1% 5,087,147 87.8% 81.9% 81.3% 0% 10.9% 74.2% 1.8% 86.9% pharyngeal mini virus capture (87) (4,466,890) (4,166,363) (4,138,127) (0) (451,687) (3,069,110) (74,979) (3,595,776) swab isolate; Post- 3,713,962 3.1% 3,597,211 85.9% 82.7% 82.0% <0.1% 14.2% 78.1% 2.4% 94.7% Human capture (116,751) (3,090,139) (2,974,892) (2,948,339) (701) (417,605) (2,303,865) (70,786) (2,792,957) adenovirus C, type 1 Naso- S3 Torque Pre- 5,139,462 <0.1% 5,139,290 82.9% 78.0% 77.4% 0% 11.4% 70.8% 1.6% 83.8% pharyngeal teno mini capture (172) (4,262,698) (4,007,111) (3,979,138) (0) (454,766) (2,816,455) (62,313) (3,333,534) swab virus; Post- 4,094,568 6.4% 3,831,506 80.2% 77% 76.1% <0.1% 14.4% 77.4% 2.4% 94.1% Human capture (263,062) (3,073,249) (2,950,353) (2,915,835) (931) (418,290) (2,255,930) (69,352) (2,744,503) parainfluenza virus 3 Naso- S4 TTV-like Pre- 6,124,424 0.7% 6,120,004 88.6% 84.7% 84.2% <0.1% 13.5% 76.9% 2.2% 92.5% pharyngeal mini virus capture (4,420) (5,424,487) (5,185,684) (5,153,877) (1) (693,606) (3,961,449) (110,525) (4,765,581) swab isolate; Post- 5,659,554 8.2% 5,198,050 86.5% 83.5% 82.8% <0.1% 15.5% 77.4% 2.4% 95.3% Human capture (461,504) (4,496,347) (4,337,848) (4,302,342) (707) (665,350) (3,329,053) (103,954) (4,099,064) bocavirus 1 Naso- S5 Torque Pre- 9,152,970 0% (0) 9,152,970 84.5% 78.2% 77.7% <0.1% 8.3% 73.4% 2.2% 83.9% pharyngeal teno virus capture (7,732,422) (7,161,848) (7,108,816) (1) (591,923) (5,214,849) (154,617) (5,961,390) swab Post- 5,834,446 <0.1% 5,834,329 81.5% 78.3% 77.4% <0.1% 12.2% 79.4% 3.0% 94.6% capture (117) (4,756,869) (4,565,673) (4,515,441) (1076) (550,019) (3,584,353) (133,939) (4,269,387) Naso- S6 Human Pre- 10,179,884 0.2% 10,159,618 81.6% 76.0% 74.7% 0% 12.6% 73.5% 1.0% 87.2% pharyngeal adenovirus capture (20,266) (8,291,060) (7,724,167) (7,589,505) (0) (958,739) (5,580,948) (76,349) (6,616,036) swab 884 Post- 12,064,068 29.3% 8,531,640 81.6% 78.3% 78.2% <0.1% 14.2% 77.6% 5.5% 97.3% B, type capture (3,532,428) (6,959,285) (6,676,571) (6,673,856) (21) (948,331) (5,180,714) (364,115) (6,493,181) 3A; KI polyo- mavirus; Human rhinovirus 80 Stool S7 Human Pre- 3,691,496 0.2% 3,684,819 94.9% 90.9% 90.0% 0% 81.3% 0.1% 2.6% 84.0% polyo- capture (6,677) (3,495,587) (3,347,941) (3,316,041) (0) (2,695,411) (4,197) (86,288) (2,.785,896) mavirus 10; Post- 4,104,534 29.5% 2,892,490 97.2% 94.1% 88.0% <0.1% 85.9% 0.2% 2.9% 89.0% Human capture (1,212,044) (2,810,676) (2,721,582) (2,544,964) (3) (2,185,234) (5,404) (74,491) (2,265,132) adenovirus C, type 1; Sapovirus; Human astrovirus. Plasma S8 Torque Pre- 10,875,448 <0.1% 10,875,410 90.8% 87.2% 86.7% 0% 13.9% 82.8% 1.8% 98.5% teno virus; capture (38) (9,879,901) (9,484,536) (9,428,692) (0) (1,309,676) (7,804,535) (172,740) (9,286,951) Human Post- 7,088,360 0.4% 7,059,020 88.6% 85.1% 84.5% <0.1% 16.0% 80.4% 2.0% 98.5% herpesvirus capture (29,340) (6,254,894) (6,006,307) (5,967,078) (569) (954,182) (4,798,804) (121,960) (5,875,515) 6B Pooled P1- Human Pre- 7,458,192 <0.1% 7,456,111 88.3% 84.2% 83.5% 0% 19.3% 76.6% 1.9% 97.8% P14 adenovirus capture (2,081) (6,584,766) (6,277,629) (6,224,995) (0) (1,203,117) (4,766,963) (118,491) (6,088,571) B, type Post- 9,295,438 12.4% 8,140,791 84.8% 80.8% 78.3% 0.1% 19.2% 78.8% 1.9% 99.9% 35; capture (1,154,647) (6,901,118) (6,581,271) (6,376,862) (2,938) (1,224,264) (5,024,459) (121,258) (6,372,919) Human bocavirus 1; Influenza A virus (H3N2); Influenza B virus; Human parvovirus B19; Norovirus GII-4; Parechovir us 1; BK polyomavi rus; JC polyomavi rus; Human rhinovirus 15; Human respiratory syncytial virus, type B; Human herpesvirus 1; Torque teno virus; Human herpesvirus 3 Pre-capture: Metagenomic shotgun sequencing without targeted sequence capture. Post-capture: Metagenomic shotgun sequencing using (ViroCap) targeted sequence capture. a Non-viral read identities as percent of total reads passing mask, adaptor, and technical filters. b The percentage of reads that mapped to the NCBl nt nucleotide database (ftp://ftp.ncbi.nlm.nih.gov/blast/db/)

TABLE 8 ViroCap and PCR correlations. PCR Sample Virus identified in results Sequencing ID from Sample clinical laboratory on results on Table 1 Sample type prior to pooling pool pool P1  Pooled Pool Adenovirus + + clinical samples P2  Pooled Pool Human Bocavirus + + clinical samples P3  Pooled Pool Influenza A + + clinical samples P4  Pooled Pool Influenza B + + clinical samples P5  Pooled Pool Parvovirus + + clinical samples P6  Pooled Pool Norovirus G2 + + clinical samples P7  Pooled Pool Parechovirus 1 + + clinical samples P8  Pooled Pool BK polyomavirus + + clinical samples P9  Pooled Pool JC polyomavirus + + clinical P10 samples Pool Rhinovirus + + Pooled clinical P11 samples Pool Respiratory + + Pooled syncytial virus clinical P12 samples Pool HSV-1 + + Pooled clinical P13 samples Pool Torque teno virus Not + Pooled tested clinical P14 samples Pool HHV-3 − + Pooled clinical NA samples Pool HHV-6 − − Pooled clinical NA samples Pool Enterovirus − − Pooled clinical NA samples Pool Parainfluenzavirus 1 + − Pooled NA clinical Pool Parainfluenzavirus 3 samples Pooled NA clinical Pool Parainfluenzavirus 4 + − samples Pooled NA clinical Pool Human − − samples metapneumovirus Pooled NA clinical Pool HHV-8 − − samples Pooled NA clinical Pool HHV-4 − − samples Pooled

TABLE 9 Detection of viruses by PCR and ViroCap. Number of viruses detected by: Either PCR Both PCR ViroCap Experiment or ViroCap and ViroCap PCR only only 1  15^(a) 12   2^(b)  1^(c) (pooled clinical specimens) 2 26 18    8^(d,e) 0 (individual specimens) Total 41 30 10 1 ^(a)Table does not include a torque teno virus detected in the clinical pool but not tested for by PCR ^(b)Parainfluenza virus types 1 and 4; These viruses were detected by PCR with high crossing threshold (Ct) values, indicating very low levels of virus. ^(c)Varicella-zoster virus ^(d)Rhinovirus; This virus was detected by PCR with high crossing threshold (Ct) values, indicating very low levels of virus. ^(e)Of the 8 viruses detected in the samples by PCR but not by sequencing, 7 were not detected in the sequencing libraries, indicating that the failure to detect was attributable to library preparation rather than ViroCap.

TABLE 10 ViroCap-1.0 Taxonomy # Seg. Taxonomy Rep.Acc.ID Host GN's Lineage Count GN.Acc.IDs Bovine ephemeral fever NC_002526 invertebrates,vertebrates 1 Rhabdoviridae,Ephemerovirus,Bovine -b AF234533 virus ephemeral fever virus Kotonkan virus NC_017714 invertebrates,vertebrates 1 Rhabdoviridae,Ephemerovirus,Kotonkan virus — HM474855 Murrumbidgee virus NC_022595 invertebrates,vertebrates 1 Bunyaviridae,Orthobunyavirus,Murrumbidgee seg. L KF234253 virus Murrumbidgee virus NC_022596 invertebrates,vertebrates 1 Bunyaviridae,Orthobunyavirus,Murrumbidgee seg. M KF234254 virus Murrumbidgee virus NC_022597 invertebrates,vertebrates 1 Bunvirusyaviridae,Orthobunyavirus,Murrumbidgee seg. S KF234255 Ngaingan virus NC_013955 invertebrates,vertebrates 1 Rhabdoviridae,Ngaingan virus — FJ715959 Tibrogargan virus NC_020804 invertebrates,vertebrates 1 Rhabdoviridae,Tibrovirus,Tibrogargan virus — GQ294472 Circovirus-like genome NC_013020 unknown 1 Circovirus-like genome BBC-A — FJ959086 BBC-A Circovirus-like genome CB- NC_013028 unknown 1 Circovirus-like genome CB-A — FJ959082 A Circovirus-like genome CB- NC_013029 unknown 1 Circovirus-like genome CB-B — FJ959083 B Circovirus-like genome NC_013023 unknown 1 Circovirus-like genome RW-A — FJ959077 RW-A Circovirus-like genome NC_013024 unknown 1 Circovirus-like genome RW-B — FJ959078 RW-B Circovirus-like genome NC_013025 unknown 1 Circovirus-like genome RW-C — FJ959079 RW-C Circovirus-like genome NC_013026 unknown 1 Circovirus-like genome RW-D — FJ959080 RW-D Circovirus-like genome NC_013027 unknown 1 Circovirus-like genome RW-E — FJ959081 RW-E Circovirus-like genome NC_013030 unknown 1 Circovirus-like genome SAR-A — FJ959084 SAR-A Circovirus-like genome NC_013018 unknown 1 Circovirus-like genome SAR-B — FJ959085 SAR-B Dragonfly larvae NC_023427 unknown 1 Dragonfly larvae associated circular virus-1 — KF738873 associated circular virus-1 Dragonfly larvae NC_023436 unknown 2 Dragonfly larvae associated circular virus-10 — KF738885,KF738884 associated circular virus-10 Dragonfly larvae NC_023428 unknown 1 Dragonfly larvae associated circular virus-2 — KF738874 associated circular virus-2 Dragonfly larvae NC_023429 unknown 2 Dragonfly larvae associated circular virus-3 — KF738875,KF738876 associated circular virus-3 Dragonfly larvae NC_023430 unknown 1 Dragonfly larvae associated circular virus-4 — KF738877 associated circular virus-4 Dragonfly larvae NC_023431 unknown 2 Dragonfly larvae associated circular virus-5 — KF738878,KF738879 associated circular virus-5 Dragonfly larvae NC_023432 unknown 1 Dragonfly larvae associated circular virus-6 — KF738880 associated circular virus-6 Dragonfly larvae NC_023433 unknown 1 Dragonfly larvae associated circular virus-7 — KF738881 associated circular virus-7 Dragonfly larvae NC_023434 unknown 1 Dragonfly larvae associated circular virus-8 — KF738882 associated circular virus-8 Dragonfly larvae NC_023435 unknown 1 Dragonfly larvae associated circular virus-9 — KF738883 associated circular virus-9 Marine RNA virus JP-A NC_009757 unknown 1 Marine RNA virus JP-A — EF198241 Marine RNA virus JP-B NC_009758 unknown 1 Marine RNA virus JP-B — EF198242 Marine RNA virus SOG NC_009756 unknown 1 Marine RNA virus SOG — EF198240 Ostreid herpesvirus 1 NC_005881 unknown 1 Malacoherpesviridae,Ostreavirus,Ostreid — AY509253 herpesvirus 1 Pig stool associated NC_017916 unknown 8 Pig stool associated circular ssDNA virus — JX305996,JX305993, circular ssDNA virus JX305991,JX305997, JX305998,JX305992, JX305994,JX305995 Pig stool associated NC_017916 unknown 1 Pig stool associated circular ssDNA virus — JQ023166 circular ssDNA virus GER2011 Pithovirus sibericum NC_023423 unknown 1 Pithovirus sibericum — KF740664 Porcine associated stool NC_018617 unknown 1 Porcine associated stool circular virus — JX274036 circular virus Porcine stool-associated NC_021203 unknown 1 Porcine stool-associated circular virus 2 — KC545226 circular virus 2 Porcine stool-associated NC_021204 unknown 4 Porcine stool-associated circular virus 3 — KC545228,KC545229, circular virus 3 KC545227,KC545230 Sclerotinia sclerotiorum NC_013116 unknown 5 Sclerotinia sclerotiorum hypovirulence — KF268026,KF268027, hypovirulence associated associated DNA virus 1 KF268028,GQ365709, DNA virus 1 KF268025 Wallerfield virus NC_023440 unknown 1 Negevirus,Wallerfield virus — KF042857 AKR (endogenous) murine NC_001702 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — JQ1998 leukemia virus ,NC_00181 leukemia virus 9,NC_0013 62,NC_001 501 ARV-138 NC_015132 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AF218359 S1 ARV-176 NC_015132 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AF218358 S1 Abelson murine leukemia NC_001499 vertebrates 1 Retroviridae,Gammaretrovirus,Abelson murine — AF033812 virus leukemia virus Acartia tonsa copepod NC_020099 vertebrates 1 Circoviridae,Circovirus,Acartia tonsa copepod — JQ837277 circovirus circovirus Adeno-associated virus-1 NC_002077 vertebrates 1 Parvoviridae,Dependovirus,Adeno-associated — AF063497 virus-1 Adeno-associated virus-4 NC_001829 vertebrates 1 Parvoviridae,Dependovirus,Adeno-associated — U89790 virus-4 Adeno-associated virus-6 NC_002077 vertebrates 1 Parvoviridae,Dependovirus,Adeno-associated — AF028704 virus-1 Adeno-associated virus-7 NC_006260 vertebrates 1 Parvoviridae,Dependovirus,Adeno-associated — AF513851 virus-7 Adeno-associated virus-8 NC_006261 vertebrates 1 Parvoviridae,Dependovirus,Adeno-associated — AF513852 virus-8 African elephant NC_022519 vertebrates 1 Polyomaviridae,Polyomavirus,African elephant — KF147833 polyomavirus 1 polyomavirus 1 African green monkey NC_004763 vertebrates 1 Polyomaviridae,Polyomavirus,African green — K02562 polyomavirus monkey polyomavirus African green monkey NC_010820 vertebrates 1 Retroviridae,Spumavirus,African green — M74895 simian foamy virus monkey simian foamy virus Aichi virus NC_001918 vertebrates 10 Picornaviridae,Kobuvirus,Aichivirus A — FJ890523,DQ028632, AY747174,GQ927704 ,JX564249,GQ92770 5,GQ927712,AB0407 49,GQ927706,GQ927 711 Aichi virus 1 NC_001918 vertebrates 1 Picornaviridae,Kobuvirus,Aichivirus A — AB010145 Alcelaphine herpesvirus 1 NC_002531 vertebrates 1 Herpesviridae,Macavirus,Alcelaphine — AF005370 herpesvirus 1 Aleutian mink disease virus NC_001662 vertebrates 6 Parvoviridae,Amdovirus,Aleutian mink disease — GU269892,JN040434 virus ,Z18276,M20036,GU 183264,GU183265 Ambystoma tigrinum virus NC_005832 vertebrates 1 Indoviridae,Ranavirus,Ambystoma tigrinum — AY150217 virus American bat vesiculovirus NC_022755 vertebrates 1 Rhabdoviridae,Vesiculovirus,American bat — JX569193 TFFN-2013 vesiculovirus TFFN-2013 American grass carp NC_010584 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 1 EF589098 reovirus American grass carp NC_010585 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 2 EF589099 reovirus American grass carp NC_010586 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 3 EF589100 reovirus American grass carp NC_010587 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 4 EF589101 reovirus American grass carp NC_010588 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 5 EF589102 reovirus American grass carp NC_010589 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 6 EF589103 reovirus American grass carp NC_010590 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 7 EF589104 reovirus American grass carp NC_010591 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 8 EF589105 reovirus American grass carp NC_010592 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 9 EF589106 reovirus American grass carp NC_010593 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. EF589107 reovirus 10 American grass carp NC_010594 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. EF589108 reovirus 11 Amphotropic murine NC_001702 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — AF411814 leukemia virus ,NC_00181 leukemia virus 9,NC_0013 62,NC_001 501 Anatid herpesvirus 1 NC_013036 vertebrates 6 Herpesviridae,Mardivirus,Anatid herpesvirus 1 — JQ673560,KF487736, JF999965,KF263690, EU082088,JQ647509 Andrias davidianus NC_005946 vertebrates 1 Incloviridae,Ranavirus,Frog virus 3 — KC865735 ranavirus Anguilla anguilla circovirus NC_023421 vertebrates 1 Circoviridae,Circovirus,Anguilla anguilla — KC469701 circovirus Anguillid herpesvirus 1 NC_013668 vertebrates 1 Alloherpesviridae,Cyprinivirus,Anguillid — FJ940765 herpesvirus 1 Aotine herpesvirus 1 NC_016447 vertebrates 1 Herpesviridae,Cytomegalovirus,Aotine — FJ483970 herpesvirus 1 Aquareovirus A NC_007582 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 1 AF418294 Aquareovirus A NC_007583 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 2 AF418295 Aquareovirus A NC_007584 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 3 AF418296 Aquareovirus A NC_007585 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 4 AF418297 Aquareovirus A NC_007588 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 8 AF418301 Aquareovirus A NC_007589 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 9 AF418302 Aquareovirus A NC_007590 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. AF418303 10 Aquareovirus A NC_007591 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. AF418304 11 Aquareovirus A NC_007592 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 6 AF418299 Aquareovirus C NC_005166 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 1 AF403398 Aquareovirus C NC_005167 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 2 AF403399 Aquareovirus C NC_005168 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 3 AF403400 Aquareovirus C NC_005169 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 4 AF403401 Aquareovirus C NC_005170 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 5 AF403402 Aquareovirus C NC_005171 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 6 AF403403 Aquareovirus C NC_005172 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 7 AF403404 Aquareovirus C NC_005173 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 8 AF403405 Aquareovirus C NC_005174 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 9 AF403406 Aquareovirus C NC_005175 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. AF403407 10 Aquareovirus C NC_005176 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. AF403408 11 Arctic ground squirrel NC_001484 vertebrates 1 Hepadnaviridae,Orthohepadnavirus,Ground — U29144 hepatitis B virus squirrel hepatitis virus Artibeus jamaicensis NC_016752 vertebrates 1 Parvoviridae, Artibeus jamaicensis parvovirus — JQ037754 parvovirus 1 1 Astrovirus MLB1 NC_011400 vertebrates 5 Astroviridae,Astrovirus MLB1 — JQ086552,AB823732, AB823731,FJ402983, FJ222451 Astrovirus MLB1 HK05 NC_011400 vertebrates 1 Astroviridae,Astrovirus MLB1 — HM450380 Astrovirus MLB2 NC_016155 vertebrates 2 Astroviridae,Astrovirus MLB2 — JF742759,AB829252 Astrovirus MLB3 NC_019028 vertebrates 1 Astroviridae,Astrovirus MLB3 — JX857870 Astrovirus VA1 NC_013060 vertebrates 1 Astroviridae,Astrovirus VA1 — FJ973620 Astrovirus VA2 NC_018669 vertebrates 1 Astroviridae,Astrovirus VA2 — GQ5021 93 Astrovirus VA3 NC_019026 vertebrates 1 Astroviridae,Astrovirus VA3 — JX857868 Astrovirus VA4 NC_019027 vertebrates 1 Astroviridae,Astrovirus VA4 — JX857869 Astrovirus wild NC_016896 vertebrates 1 Astroviridae,Mamastrovirus,Astrovirus wild — JQ340310 boar/W BAstV-1/ boar/W BAstV-1/2011/HU N 2011/HUN Ateles paniscus NC_019853 vertebrates 1 Polyomaviridae,Polyomavirus,Ateles paniscus — JX159987 polyomavirus 1 polyomavirus 1 Ateline herpesvirus 3 NC_001987 vertebrates 1 Herpesviridae,Rhadinovirus,Ateline — AF083424 herpesvirus 3 Atlantic salmon reovirus TS NC_007583 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 2 EF434978 Atlantic salmon reovirus TS NC_007590 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. EF434979 10 Atlantic salmon swim NC_007654 vertebrates 1 Retroviridae,Atlantic salmon swim bladder — DQ174103 bladder sarcoma virus sarcoma virus Avian adeno-associated NC_006263 vertebrates 1 Parvoviridae,Dependovirus,Avian adeno- — GQ368252 virus associated virus Avian adeno-associated NC_004828 vertebrates 2 Parvoviridae,Dependovirus,Avian adeno- — AY186198,AY629582 virus ATCC VR-865 associated virus ATCC VR-865 Avian adeno-associated NC_006263 vertebrates 1 Parvoviridae,Dependovirus,Avian adeno- — AY629583 virus strain DA-1 associated virus Avian carcinoma virus NC_001402 vertebrates 1 Retroviridae,Alpharetrovirus,Avian carcinoma — M14008 virus Avian encephalomyelitis NC_003990 vertebrates 3 Picornaviridae,Tremovirus,Avian — AJ225173,AY275539, virus encephalomyelitis virus AY517471 Avian endogenous NC_005947 vertebrates 7 Retroviridae, Avian endogenous retrovirus — AJ623291,AJ238124, retrovirus EAV-HP EAV-HP AJ238125,AJ623292, AJ623289,AJ292966, AJ623290 Avian gyrovirus 2 NC_015396 vertebrates 2 Circoviridae,Gyrovirus,Avian gyrovirus 2 — HM590588,JQ690763 Avian infectious bronchitis NC_010800 vertebrates 1 Coronaviridae,Gammacoronavirus,Avian — AJ311317 virus (strain Beaudette CK) ,NC_00145 coronavirus 1 Avian infectious bronchitis NC_010800 vertebrates 1 Coronaviridae,Gammacoronavirus,Avian — AY646283 virus ,NC_00145 coronavirus partridge/GD/S14/2003 1 Avian leukemia virus NC_015116 vertebrates 1 Retroviridae,Alpharetrovirus,Avian leukosis — HQ425636 ,NC_00140 virus 8 Avian leukosis virus NC_015116 vertebrates 59 Retroviridae,Alpharetrovirus,Avian leukosis — KF562374,JF932001, ,NC_00140 virus JF932004,HQ148555, 8 AY013303,AB669569 JF931999,HM58265 7,AB669897,AB6694 33,AB670314,AB764 104,AB303223,EU07 0900,JF826241,JX25 4901,JF932002,HM4 52340,HM235667,KF 738251,KF562373,H M235669,EU070902, JF932003,DQ365814, JN389518,AB764106, FJ216405,AB669896, HM452342,HM23566 8,HM452339,JN6248 80,JF932000,AB7641 07,GU982310,JN389 517,HQ148554,HM45 2341,GU982308,EU0 70901,AB682778,HQ 900844,EF467236,JN 624879,HM235670,K F562375,HM582658, JF951728,AB112960, JX855935,AY013304, JX453210,AB670312, DQ115805,HM23566 5,HM776937,JN6248 78,AB669568 Avian leukosis virus NC_015116 vertebrates 1 Retroviridae,Alpharetrovirus,Avian leukosis — Z46390 HPRS103 ,NC_00140 virus 8 Avian leukosis virus LR-9 NC_015116 vertebrates 1 Retroviridae,Alpharetrovirus,Avian leukosis — AY350569 ,NC_00140 virus 8 Avian myelocytomatosis NC_001866 vertebrates 2 Retroviridae,Alpharetrovirus,Avian — M11784,AF033809 virus myelocytomatosis virus Avian orthoreovirus NC_015126 vertebrates 8 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. FR694191,DQ238093 L1 ,DQ238094,EU61673 9,EU616735,HM2229 78,AY547458,KC183 748 Avian orthoreovirus NC_015127 vertebrates 2 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. HM222980,FR694192 L2 Avian orthoreovirus NC_015128 vertebrates 14 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY652695,AY652698 L3 ,AY652700,DQ30017 5,AY652694,EU6167 38,FR694193,HM222 979,AY652699,AY65 2697,AY652696,AY6 52701,EU616737,AY 652693 Avian orthoreovirus NC_015129 vertebrates 19 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY639620,AY639614 M ,AY557188,EU61673 6,AY639612,AY5571 89,AY639619,AY639 617,AY639621,AY63 9613,AY639616,FR6 94194,AY639611,AY 639618,AY639615,E U616740,HM222977, DQ300176,AY639610 Avian orthoreovirus NC_015130 vertebrates 19 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY635940,AY635938 M 2,EU616741,HM22297 6,AY635936,DQ3001 77,AY635943,AY635 935,AY635945,AY63 5944,EU616742,AY6 35941,AY635934,AY 635939,AY750053,A Y635937,AY635942,F R694195,AY750052 Avian orthoreovirus NC_015131 vertebrates 21 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY573911,FR694196 M3 ,AY573912,AY57391 3,AY573908,AY5739 07,AY557191,AY573 909,EU616744,AY57 3905,AY573910,KC8 65791,AY573914,AY 608700,AY557190,A Y573904,AY573915, EU616743,HM22297 5,AY303993,AY5739 06 Avian orthoreovirus NC_015132 vertebrates 15 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AF004857,JN559377, S1 L39002, HM222974,D 0525419,JN559375,F R694197,DQ643974, DQ868790, DQ86879 1,DQ643975,EF0573 97,DQ868789,EF057 398,EU526387 Avian orthoreovirus NC_015133 vertebrates 6 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AF059717,FR694198, S2 AF104311,JN559376, AF059716,HM222973 Avian orthoreovirus NC_015134 vertebrates 12 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. EF030496,JQ924284, S3 AF059720,EF030498, AF059721,EF030497, HM222972,AF004856 ,EF030499,JQ916907 ,DQ415659,FR69419 9 Avian orthoreovirus NC_015135 vertebrates 6 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. HM222971,AF059725 S4 ,EF122838,JN559378 ,AF059724,FR694200 Avian orthoreovirus strain NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641740 1017-1 L1 Avian orthoreovirus strain NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641742 2408 L1 Avian orthoreovirus strain NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641736 601G L1 Avian orthoreovirus strain NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641737 916 L1 Avian orthoreovirus strain NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641738 918 L1 Avian orthoreovirus strain NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641739 919 L1 Avian orthoreovirus strain NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641743 OS161 L1 Avian orthoreovirus strain NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641744 R2/TW L1 Avian reovirus strain 1733 NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641741 L1 Avian reovirus strain 1733 NC_015128 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AF384171 L3 Avian reovirus strain S1133 NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AY641735 L1 Avian reovirus strain S1133 NC_015132 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AF330703 S1 Avian sapelovirus NC_006553 vertebrates 1 Picornaviridae,Sapelovirus,Avian sapelovirus — AY563023 Avirulent turkey NC_001958 vertebrates 1 Adenoviridae,Siadenovirus,Turkey adenovirus — AY849321 hemorrhagic enteritis virus A Baboon enterovirus NC_010415 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus J — AF326766 Baboon orthoreovirus NC_015877 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. HQ847903 orthoreovirus L1 Baboon orthoreovirus NC_015878 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. HQ847904 orthoreovirus L2 Baboon orthoreovirus NC_015879 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. HQ847905 orthoreovirus L3 Baboon orthoreovirus NC_015880 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. HQ847906 orthoreovirus M1 Baboon orthoreovirus NC_015881 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. HQ847907 orthoreovirus M2 Baboon orthoreovirus NC_015882 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. HQ847908 orthoreovirus M3 Baboon orthoreovirus NC_015883 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. AF059719 orthoreovirus S1 Baboon orthoreovirus NC_015884 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. AF059723 orthoreovirus S2 Baboon orthoreovirus NC_015885 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. AF406787 orthoreovirus S4 Baboon orthoreovirus NC_015886 vertebrates 1 Reoviridae,Orthoreovirus,Baboon seg. AF059727 orthoreovirus S3 Bandicoot papillomatosis NC_010107 vertebrates 1 Papillomaviridae,Bandicoot papillomatosis — EU069819 carcinomatosis virus type 1 carcinomatosis virus type 1 Bandicoot papillomatosis NC_010817 vertebrates 1 Papillomaviridae,Bandicoot papillomatosis — EU277647 carcinomatosis virus type 2 carcinomatosis virus type 2 Barbel circovirus NC_015399 vertebrates 2 Circoviridae,Circovirus,Barbel circovirus — JF279961,GU799606 Barfin flounder nervous NC_013458 vertebrates 1 Nodaviridae,Betanodavirus,Barfin flounder seg. EU236146 necrosis virus nervous necrosis virus RNA 1 Barfin flounder nervous NC_013459 vertebrates 1 Nodaviridae,Betanodavirus,Barfin flounder seg. EU236147 necrosis virus nervous necrosis virus RNA 2 Barfin flounder virus NC_011063 vertebrates 1 Nodaviridae,Betanodavirus,Barfin flounder seg. EU826137 BF93Hok virus BF93Hok RNA 1 Barfin flounder virus NC_011064 vertebrates 1 Nodaviridae,Betanodavirus,Barfin flounder seg. EU826138 BF93Hok virus BF93Hok RNA 2 Bat adeno-associated virus NC_014468 vertebrates 1 Parvoviridae,Dependovirus,Bat adeno- — GU226971 YNM associated virus YNM Bat adenovirus 2 NC_015932 vertebrates 1 Adenoviridae,Mastadenovirus,Bat adenovirus — JN252129 B Bat adenovirus TJM NC_016895 vertebrates 1 Adenoviridae,Mastadenovirus,Bat adenovirus — GU226970 A Bat circovirus NC_021206 vertebrates 2 Circoviridae,Circovirus,Bat circovirus — KC339249,JX863737 Bat coronavirus NC_008315 vertebrates 1 Coronaviridae,Betacoronavirus,Bat — DQ648794 (BtCoV/133/2005) coronavirus (BtCoV/133/2005) Bat coronavirus 1A NC_010437 vertebrates 1 Coronaviridae,Alphacoronavirus,Bat — EU420138 coronavirus 1A Bat coronavirus 1B NC_010436 vertebrates 1 Coronaviridae,Alphacoronavirus,Bat — EU420137 coronavirus 1B Bat coronavirus BM48- NC_014470 vertebrates 1 Coronaviridae,Bat coronavirus BM48- — GU190215 31/BG R/2008 31/BG R/2008 Bat coronavirus NC_022103 vertebrates 1 Coronaviridae,Alphacoronavirus,Bat — KF430219 CDPHE15/USA/2006 coronavirus CDPHE15/USA/2006 Bat coronavirus HKU4-2 NC_009019 vertebrates 1 Coronaviridae,Betacoronavirus,Tylonycteris — EF065506 bat coronavirus HKU4 Bat coronavirus HKU4-3 NC_009019 vertebrates 1 Coronaviridae,Betacoronavirus,Tylonycteris — EF065507 bat coronavirus HKU4 Bat coronavirus HKU4-4 NC_009019 vertebrates 1 Coronaviridae,Betacoronavirus,Tylonycteris — EF065508 bat coronavirus HKU4 Bat coronavirus HKU5-2 NC_009020 vertebrates 1 Coronaviridae,Betacoronavirus,Pipistrellus bat — EF065510 coronavirus HKU5 Bat coronavirus HKU5-3 NC_009020 vertebrates 1 Coronaviridae,Betacoronavirus,Pipistrellus bat — EF065511 coronavirus HKU5 Bat coronavirus HKU5-5 NC_009020 vertebrates 1 Coronaviridae,Betacoronavirus,Pipistrellus bat — EF065512 coronavirus HKU5 Bat coronavirus HKU9-10-1 NC_009021 vertebrates 1 Coronaviridae,Betacoronavirus,Rousettus bat — HM211100 coronavirus HKU9 Bat coronavirus HKU9-10-2 NC_009021 vertebrates 1 Coronaviridae,Betacoronavirus,Rousettus bat — HM211101 coronavirus HKU9 Bat coronavirus HKU9-2 NC_009021 vertebrates 1 Coronaviridae,Betacoronavirus,Rousettus bat — EF065514 coronavirus HKU9 Bat coronavirus HKU9-3 NC_009021 vertebrates 1 Coronaviridae,Betacoronavirus,Rousettus bat — EF065515 coronavirus HKU9 Bat coronavirus HKU9-4 NC_009021 vertebrates 1 Coronaviridae,Betacoronavirus,Rousettus bat — EF065516 coronavirus HKU9 Bat coronavirus HKU9-5-1 NC_009021 vertebrates 1 Coronaviridae,Betacoronavirus,Rousettus bat — HM211098 coronavirus HKU9 Bat coronavirus HKU9-5-2 NC_009021 vertebrates 1 Coronaviridae,Betacoronavirus,Rousettus bat — HM211099 coronavirus HKU9 Bat hepatitis virus NC_020881 vertebrates 3 Hepadnaviridae,Bat hepatitis virus — JX941466,JX941467, JX941468 Bat picornavirus 1 NC_015940 vertebrates 2 Picornaviridae,Bat picornavirus 1 — HQ595341,HQ59534 0 Bat picornavirus 2 NC_015941 vertebrates 2 Picornaviridae,Bat picornavirus 2 — HQ595342,HQ59534 3 Bat picornavirus 3 NC_015934 vertebrates 2 Picornaviridae,Bat picornavirus 3 — HQ595345,HQ59534 4 Beak and feather disease NC_001944 vertebrates 205 Circoviridae,Circovirus,Beak and feather — JQ782201,GU936294 virus disease virus ,JX221005,JX221002, GU936287,JQ782197 ,GQ396655,JX22100 3,AY521238,KF18869 4,AF311297,JXQ4920 6,JX221025,GQ1657 56,GU015021,JX221 014,AY450436,GUO1 5014,HM748920,JX2 21001,HM748922,GU 936289,AY521236,JX 049195,GU936291,G U015015,JF519618,J X221031,JX221030,A B277750,GQ396653, GU936290,HM74892 7,HM748935,AF3112 99,JX221007,GU015 023,KC980909,AB27 7747,JX221011,HM7 48924,GQ120621,JX 221006,JXQ49198,AY 450441,JX221004,G 0396652,AB277746,J X221040,HM748925, KF188684,KF467254, JXQ49197,DQ397818 ,JXQ49199,AB277751 ,JX221016,JQ782199 ,GU047347,KC69365 1,KF188685,FJ68598 0,GU015012,AF0718 78,AF311296,JX2210 12,GQ386944,KF188 687,JQ782196,EF457 975,GU015018,JX22 1032,GU015016,JX2 21021,JXQ49216,AY4 50438,AY450440,AF3 11302,JXQ49219,JX2 21008,GU015019,GU 936295,HM748932,E U810208,FJ685989,A F311301,JXQ49200,K F188683,JXQ49218,J XQ49209,GU015022, KF188689,JX221024, JXQ49217,JX221010, JXQ49220,HM748919 ,JX221037,KF188681 ,JQ782200,HM74893 4,HM748928,JXQ492 04,KF188690,JXQ492 05,JXQ49208,JX2210 36,JF519619,AB5145 68,GQ165757,FJ685 979,JX221038,HM74 8931,JQ782208,AY45 0442,JXQ49214,JX22 1035,JX221039,JQ78 2204,KF188693,JX22 1018,JX221043,JXQ4 9203,AY450434,AY4 50439,KF188686,GQ 165758,KF188682,G 0396656,JX221022,J X221013,JQ782206, HM748929,AY521237 ,GU936292,KF67333 5,JX221019,GU9362 96,KF673337,KF4672 52,AY450435,AB277 748,FJ685985,JX221 026,JX221034,HM74 8938,JX221041,HM7 48933,EF457974,AY4 50443,JXQ49211,HM 748930,JX221042,JX 221027,JXQ49207,AF 311300,HM748926,K F673336,GU015013,J X221020,JXQ49213,A F311298,JXQ49202,J X221023,GU936293, JQ782198,JXQ49196, GQ329705,JX221017 ,HM748937,KF56125 0,HM748921,JX2210 29,JX221033,GU015 017,KF850537,HM74 8936,HM748918,JQ7 82205,EU810207,JXQ 49215,GU936288,AF 080560,GQ396654,J XQ49210,AB277749, KF188688,JXQ49201, GU015020,HM74892 3,KC510146,KF1886 92,JXQ49212,AF3112 95,GU936297,HM748 939,KF467251,JXQ49 221,KF188691,JX221 009,JX221028,AY450 437,FJ685978,KF467 253,JX221015 Beluga Whale coronavirus NC_010646 vertebrates 1 Coronaviridae,Gammacoronavirus,Beluga — EU111742 SW1 Whale coronavirus SW1 Betacoronavirus England 1 NC_019843 vertebrates 1 Coronaviridae,Betacoronavirus,Middle East — KC164505 respiratory syndrome coronavirus Betacoronavirus NC_022643 vertebrates 2 Coronaviridae,Betacoronavirus,Betacoronavir — KC545383,KC545386 Erinaceus/VMC/DEU/2012 us Erinaceus/VMC/D EU/2012 Bettongia penicillata NC_014143 vertebrates 1 Papillomaviridae,Bettongia penicillata — GU220391 papillomavirus 1 papillomavirus 1 Blotched snakehead virus NC_005982 vertebrates 1 Birnaviridae,Blosnavirus,Blotched snakehead seg. A AJ459382 virus Blotched snakehead virus NC_005983 vertebrates 1 Birnaviridae,Blosnavirus,Blotched snakehead seg. B AJ459383 virus Bluegill picornavirus NC_018506 vertebrates 1 Bluegill picornavirus — JX134222 Bocavirus NC_014358 vertebrates 1 Parvoviridae,Bocavirus,Bocavirus — HM145750 gorilla/GBoV1/2009 gorilla/GBoV1/2009 Border disease virus NC_003679 vertebrates 5 Flaviviridae,Pestivirus,Border disease virus — KC963426,KF925348 ,AF037405,GU27087 7,GQ902940 Border disease virus- NC_003679 vertebrates 1 Flaviviridae,Pestivirus,Border disease virus — U70263 BD31 Bos grunniens NC_001522 vertebrates 6 Papillomaviridae,Deltapapillomavirus,Deltapap — JX174438,JX174439, papillomavirus type 1 illomavirus 4 JX174441,JX174442, JX174437,JX174440 Bottlenose dolphin NC_010646 vertebrates 3 Coronaviridae,Gammacoronavirus,Beluga — KF793824,KF793825, coronavirus HKU22 Whale coronavirus SW1 KF793826 Bovine adeno-associated NC_005889 vertebrates 1 Parvoviridae,Dependovirus,Bovine adeno- — AY388617 virus associated virus Bovine adenovirus 3 NC_001876 vertebrates 1 Adenoviridae,Mastadenovirus, Bovine — JN381195 adenovirus B Bovine adenovirus 6 NC_020074 vertebrates 1 Adenoviridae,Atadenovirus,Bovine adenovirus — JQ345700 E Bovine adenovirus B NC_001876 vertebrates 1 Adenoviridae, Mastadenovirus, Bovine — AF030154 adenovirus B Bovine adenovirus D NC_002685 vertebrates 1 Adenoviridae,Atadenovirus,Bovine adenovirus — AF036092 D Bovine calicivirus NC_002551 vertebrates 1 Caliciviridae,Vesivirus,Vesicular exanthema of — AJQ11099 swine virus Bovine circovirus NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — AF109397 Bovine coronavirus NC_010327 vertebrates 4 Coronaviridae,Betacoronavirus,Betacoronavir — AF391542,AF220295, ,NC_00773 U00735,AB354579 2,NC_0051 47,NC_003 045 Bovine coronavirus DB2 NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — DQ811784 ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus E- NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — EF424619 AH187 ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus E- NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — FJ938064 AH187-TC ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus E-AH65 NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — EF424615 ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus E- NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — EF424616 AH65-TC ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus E-DB2- NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — FJ938063 TC ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus R- NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — EF424620 AH187 ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus R- NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — EF424617 AH65 ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus R- NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — EF424618 AH65-TC ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine coronavirus isolate NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus, — DQ915164 Alpaca ,NC_00773 Betacoronavirus 1 2,NC_0051 47,NC_003 045 Bovine enterovirus NC_001859 vertebrates 4 Picornaviridae,Enterovirus,Enterovirus E — DQ092769,DQ09277 1,DQ092792,DQ0927 93 Bovine enterovirus strain NC_001859 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus E — AF123432 K2577 Bovine enterovirus strain NC_001859 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus E — AF123433 SL305 Bovine enterovirus type 2 NC_021220 vertebrates 4 Picornaviridae,Enterovirus,Enterovirus F — HQ663846,AY508696 ,HQ917060,AY50869 7 Bovine foamy virus NC_001831 vertebrates 4 Retroviridae,Spumavirus,Bovine foamy virus — U94514,JX307861,A Y134750,JX307862 Bovine herpesvirus 1 NC_001847 vertebrates 1 Herpesviridae,Varicellovirus,Bovine — AJQ04801 herpesvirus 1 Bovine herpesvirus 4 NC_002665 vertebrates 2 Herpesviridae,Rhadinovirus,Bovine — AF318573,JN133502 herpesvirus 4 Bovine herpesvirus 5 NC_005261 vertebrates 1 Herpesviridae,Varicellovirus,Bovine — AY261359 herpesvirus 5 Bovine herpesvirus type NC_001847 vertebrates 1 Herpesviridae,Varicellovirus,Bovine — JX898220 1.1 herpesvirus 1 Bovine hungarovirus 1 NC_018668 vertebrates 1 Picornaviridae,Hunnivirus,Hunnivirus A — JQ941880 Bovine immunodeficiency NC_001413 vertebrates 1 Retroviridae,Lentivirus,Bovine — M32690 virus immunodeficiency virus Bovine kobuvirus NC_004421 vertebrates 1 Picornaviridae,Kobuvirus,Aichivirus B — AB084788 Bovine leukemia virus NC_001414 vertebrates 9 Retroviridae,Deltaretrovirus,Bovine leukemia — AF033818,FJ914764, virus DQ0647,AF257515,H E967301,K02120,HE 967303,EF600696,H E967302 Bovine papillomavirus-1 NC_001522 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Deltapap — XQ2346 illomavirus 4 Bovine papillomavirus-3 NC_004197 vertebrates 1 Papillomaviridae,Xipapillomavirus,Xipapilloma — AJ620207 virus 1 Bovine papillomavirus-4 NC_004197 vertebrates 1 Papillomaviridae,Xipapillomavirus,Xipapilloma — XQ5817 virus 1 Bovine papillomavirus-5 NC_004195 vertebrates 1 Papillomaviridae,Epsilonpapillomavirus,Epsilo — AJ620206 npapillomavirus 1 Bovine papillomavirus-6 NC_004197 vertebrates 1 Papillomaviridae,Xipapillomavirus,Xipapilloma — AJ620208 virus 1 Bovine papillomavirus 3 NC_004197 vertebrates 1 Papillomaviridae,Xipapillomavirus, — AF486184 Xipapillomavirus 1 Bovine papillomavirus 7 NC_007612 vertebrates 1 Papillomaviridae,Bovine papillomavirus 7 — DQ217793 Bovine papillomavirus 8 NC_004195 vertebrates 1 Papillomaviridae,Epsilonpapillomavirus,Epsilo — DQ098913 npapillomavirus 1 Bovine papillomavirus NC_004197 vertebrates 1 Papillomaviridae,Xipapillomavirus, — EU360723 BAA5-Japan Xipapillomavirus 1 Bovine papillomavirus type NC_001522 vertebrates 2 Papillomaviridae,Deltapapillomavirus,Deltapap — JX678969,AB626705 1 illomavirus 4 Bovine papillomavirus type NC_004197 vertebrates 2 Papillomaviridae,Xipapillomavirus, — AB331651,KF017607 10 Xipapillomavirus 1 Bovine papillomavirus type NC_004197 vertebrates 1 Papillomaviridae,Xipapillomavirus, — AB543507 11 Xipapillomavirus 1 Bovine papillomavirus type NC_004197 vertebrates 2 Papillomaviridae,Xipapillomavirus, — JF834524,JF834523 12 Xipapillomapillomavirus type Bovine papillomavirus type NC_001522 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Deltapap — JQ798171 13 illomavirus 4 Bovine papillomavirus type NC_001522 vertebrates 2 Papillomaviridae,Deltapapillomavirus,Deltapap — M20219,KC878306 2 illomavirus 4 Bovine papillomavirus type NC_004195 vertebrates 1 Papillomaviridae,Epsilonpapillomavirus,Epsilo — DQ098917 8-EB npapillomavirus 1 Bovine papillomavirus type NC_004197 vertebrates 1 Papillomaviridae,Xipapillomavirus, — AB331650 9 Xipapillomavirus 1 Bovine papular stomatitis NC_005337 vertebrates 1 Poxviridae,Parapoxvirus,Bovine papular — AY386265 virus stomatitis virus Bovine parvovirus NC_001540 vertebrates 1 Parvoviridae,Bocavirus,Bovine parvovirus — M14363 Bovine parvovirus-2 NC_006259 vertebrates 1 Parvoviridae,Dependovirus,Bovine parvovirus-2 — AF406966 Bovine parvovirus-1 NC_001540 vertebrates 1 Parvoviridae,Bocavirus,Bovine parvovirus — DQ335247 Bovine polyomavirus NC_001442 vertebrates 1 Polyomaviridae,Polyomavirus,Bovine — D13942 polyomavirus Bovine respiratory NC_012948 vertebrates 1 Coronaviridae, Bovine respiratory coronavirus — FJ938065 coronavirus AH187 AH187 Bovine respiratory NC_012949 vertebrates 1 Coronaviridae, Bovine respiratory coronavirus — FJ938066 coronavirus bovine/US/OH- bovine/US/OH-440-TC/1996 440-TC/1996 Bovine rhinitis B virus NC_010354 vertebrates 1 Picornaviridae,Aphthovirus,Bovine rhinitis B — EU236594 virus Bovine viral diarrhea virus NC_001461 vertebrates 17 Flaviviridae,Pestivirus,Bovine viral diarrhea — JX419397,U86599,AJ 1 virus 1 133739,KC963967,A F041040,KC757383, M31182,AJ133738,E F101530,KF772785,U 86600,AF268278,DQ 088995,JN400273,AF 220247,JX419398,JQ 799141 Bovine viral diarrhea virus NC_001461 vertebrates 1 Flaviviridae,Pestivirus,Bovine viral diarrhea — AF526381 1 strain ZM-95 virus 1 Bovine viral diarrhea virus NC_002032 vertebrates 8 Flaviviridae,Pestivirus,Bovine viral diarrhea — AB567658,AF002227, 2 virus 2 GQ888686,FJ527854 ,AY149215,HQ25881 0,KC963968,AF1459 67 Bovine viral diarrhea virus NC_002032 vertebrates 1 Flaviviridae,Pestivirus,Bovine viral diarrhea — AF502399 2-New York'93 virus 2 Bovine viral diarrhea virus NC_012812 vertebrates 8 Flaviviridae,Pestivirus,Bovine viral diarrhea — JX469119,JX985409, 3 virus 3 JQ612704,AB871953, KC297709,HQ231763 ,JQ612705,KC78874 8 Bovine viral diarrhea virus NC_012812 vertebrates 1 Flaviviridae,Pestivirus,Bovine viral diarrhea — FJQ40215 3 Th/04_KhonKaen virus 3 Bovine viral diarrhea virus NC_001461 vertebrates 1 Flaviviridae,Pestivirus,Bovine viral diarrhea — AJ585412 VEDEVAC virus 1 Bovine viral diarrhea virus NC_001461 vertebrates 1 Flaviviridae,Pestivirus,Bovine viral diarrhea — AF091605 strain Oregon C24V virus 1 Bovine viral diarrhea virus NC_001461 vertebrates 3 Flaviviridae,Pestivirus,Bovine viral diarrhea — HQ174293,HQ17429 type 1a virus 1 2,JN380080 Bovine viral diarrhea virus NC_001461 vertebrates 6 Flaviviridae,Pestivirus,Bovine viral diarrhea — HQ174296,JN644055 type 1b virus 1 ,JN380089,JN380088 ,JN704144,HQ17429 4 Breda virus NC_007447 vertebrates 1 Coronaviridae,Torovirus,Bovine torovirus — AY427798 Broome virus NC_014236 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258977 L1 Broome virus NC_014237 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258978 L2 Broome virus NC_014238 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258979 L3 Broome virus NC_014239 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258980 M1 Broome virus NC_014240 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258981 M2 Broome virus NC_014241 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258982 M3 Broome virus NC_014242 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258983 S1 Broome virus NC_014243 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258984 S2 Broome virus NC_014244 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258985 S3 Broome virus NC_014245 vertebrates 1 Reoviridae,Orthoreovirus,Broome virus seg. GQ258986 S4 Budgerigar fledgling NC_004764 vertebrates 14 Polyom aviridae,Polyomavirus,Budgerigar — AB453165,AF118150, disease polyomavirus fledgling disease polyomavirus AB453166,M20775,A B453162,GU452537, AB477106,AB453160 ,AB453161,FJ385773 ,AY672646,AB45315 9,AB453164,AB4531 63 Budgerigar fledgling NC_004764 vertebrates 1 Polyom aviridae,Polyomavirus,Budgerigar — AF241168 disease virus-1 fledgling disease polyomavirus Budgerigar fledgling NC_004764 vertebrates 1 Polyom aviridae,Polyomavirus,Budgerigar — AF241169 disease virus-4 fledgling disease polyomavirus Budgerigar fledgling NC_004764 vertebrates 1 Polyom aviridae,Polyomavirus,Budgerigar — AF241170 disease virus-5 fledgling disease polyomavirus Butcherbird polyomavirus NC_023008 vertebrates 1 Polyomaviridae,Polyomavirus,Butcherbird — KF360862 polyomavirus Calf-giraffe coronavirus NC_010327, vertebrates 1 Coronaviridae,Betacoronavirus, — EF424624 US/OH3/2006 NC_007732, Betacoronavirus 1 NC_005147, NC_003045 Calicivirus isolate Allston NC_004542 vertebrates 1 Caliciviridae,Canine calicivirus — GQ475302 2008/US Calicivirus isolate NC_004542 vertebrates 1 Caliciviridae,Canine calicivirus — GQ475301 Allston 2009/US Calicivirus isolate NC_006875 vertebrates 1 Caliciviridae,Calicivirus isolate TCG — AB117797 TCG Calicivirus pig/ NC_012699 vertebrates 1 Caliciviridae,St-Valerien swine virus — FJ355930 AB104/CAN Calicivirus pig/ NC_012699 vertebrates 1 Caliciviridae,St-Valerien swine virus — FJ355928 AB90/CAN Calicivirus pig/ NC_012699 vertebrates 1 Caliciviridae,St-Valerien swine virus — FJ355929 F15-10/CAN Calicivirus pig/NC- NC_012699 vertebrates 1 Caliciviridae,St-Valerien swine virus — GU592498 WGP93C/USA/2009 Calicivirus strain NB NC_004064, vertebrates 1 Caliciviridae,Nebovirus,Newbury-1 virus — AY082891 NC_007916 California sea lion NC_013796 vertebrates 1 Polyomaviridae,Polyomavirus,California — GQ331138 polyomavirus 1 sea lion polyomavirus 1 Callitrichine NC_004367 vertebrates 1 Herpes viridae,Lymphocryptovirus, — AF319782 herpesvirus 3 Callitrichine herpesvirus 3 Camelpox virus NC_003391 vertebrates 1 Poxviridae,Orthopoxvirus,Camelpox virus — AF438165 Camelpox virus CMS NC_003391 vertebrates 1 Poxviridae,Orthopoxvirus,Camelpox virus — AY009089 Camelus dromedarius NC_015267 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Camelus — HQ912790 papillomavirus type 1 dromedarius papillomavirus type 1 Camelus dromedarius NC_015268 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Camelus — HQ912791 papillomavirus type 2 dromedarius papillomavirus type 2 Canary circovirus NC_003410 vertebrates 1 Circoviridae,Circovirus,Canary circovirus — AJ301633 Canary polyomavirus NC_017085 vertebrates 1 Polyomaviridae,Polyomavirus,Canary polyomavirus — GU345044 Canarypox virus NC_005309 vertebrates 1 Poxviridae,Avipoxvirus,Canarypox virus — AY318871 Canine adenovirus NC_001734 vertebrates 1 Adenoviridae,Mast ad enovirus,Canine adenovirus A — Y07760 Canine adenovirus 1 NC_001734 vertebrates 1 Adenoviridae,Mast ad enovirus,Canine adenovirus A — U55001 Canine adenovirus 2 NC_001734 vertebrates 1 Adenoviridae,Mast ad enovirus,Canine adenovirus A — U77082 Canine bocavirus NC_020499 vertebrates 5 Parvoviridae,Bocavirus,Canine bocavirus — JQ692588,JN648103, JQ692591 ,JQ692590, JQ692589 Canine calicivirus NC_004542 vertebrates 1 Caliciviridae,Canine calicivirus — AB070225 Canine circovirus NC_020904 vertebrates 3 Circoviridae,Circovirus,Canine circovirus — KC241982,KC241983, KC241984 Canine coronavirus NC_002306 vertebrates 4 Coronaviridae,Alphacoronavirus,Alphacoronavirus 1 — GQ477367,JQ404409 JQ404410,JN856008 Canine kobuvirus 1 NC_001918 vertebrates 1 Picornaviridae, Kobuvirus,Aichivirus A KC161964 Canine kobuvirus NC_001918 vertebrates 1 Picornaviridae, Kobuvirus,Aichivirus A — JN088541 US- PC0082 Canine minute virus NC_004442 vertebrates 6 Parvoviridae,Bocavirus,Canine minute virus — FJ214110,AB518884, AF495467,AB518883, FJ899734,AB158475 Canine oral NC_001619 vertebrates 2 Papillomaviridae,Lambdapapillomavirus, — D55633,L22695 papillomavirus Lamb dapapillomavirus 2 Canine papillomavirus 10 NC_016075 vertebrates 1 Papillomaviridae,Canine papillomavirus 10 — JF800657 Canine papillomavirus 11 NC_008297 vertebrates 1 Papillomaviridae,Chipapillomavirus,Chipapillo — JF800658 mavirus 1 Canine papillomavirus 12 NC_016074 vertebrates 1 PapillomaviridaeCanine papillomavirus 9 — JQ754321 Canine papillomavirus 14 NC_019852 vertebrates 1 PapillomaviridaeCanine papillomavirus 14 — JQ701802 Canine papillomavirus 2 NC_006564 vertebrates 1 Papillomaviridae,Taupapillomavirus,Taupapillo — AY722648 mavirus 1 Canine papillomavirus 3 NC_008297 vertebrates 1 Papillomaviridae,Chipapillomavirus,Chipapillo — DQ295066 mavirus 1 Canine papillomavirus 4 NC_010226 vertebrates 1 Papillomaviridae,Chipapillomavirus,Chipapillo — EF584537 mavirus 2 Canine papillomavirus 5 NC_008297 vertebrates 1 Papillomaviridae,Chipapillomavirus,Chipapillo — FJ492743 mavirus 1 Canine papillomavirus 7 NC_006564 vertebrates 1 Papillomaviridae,Taupapillomavirus,Taupapillo — FJ492742 mavirus 1 Canine papillomavirus 8 NC_016014 vertebrates 1 Papillomaviridae,Canine papillomavirus 8 — HQ262536 Canine papillomavirus 9 NC_016074 vertebrates 1 Papillomaviridae,Canine papillomavirus 9 — JF800656 Canine parvovirus NC_001539 vertebrates 4 Parvoviridae,Parvovirus,Feline panleukopenia — EU310373,M19296,J virus N033694,D26079 Canine parvovirus 2b NC_001539 vertebrates 1 Parvoviridae,Parvovirus,Feline panleukopenia — JQ268284 virus Canine picodicistrovirus NC_021178 vertebrates 3 Picornaviridae,Dicipivirus,Cadicivirus A — JN819202,JN819203, JN819204 Canine picornavirus NC_016964 vertebrates 1 Canine picornavirus — JN831356 Capra hircus NC_008032 vertebrates 1 Papillomaviridae,Phipapillomavirus,Phipapillo — DQ091200 papillomavirus type 1 mavirus 1 Capreolus capreolus NC_011051 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Deltapap — EF680235 papillomavirus 1 illomavirus 5 Caprine arthritis NC_001463 vertebrates 6 Retroviridae,Lentivirus,Caprine arthritis — GQ381130,JF502416 encephalitis virus encephalitis virus ,M33677,AF322109,G U120138,AY900630 Caprine arthritis NC_001463 vertebrates 1 Retroviridae,Lentivirus,Caprine arthritis — FJ195346 encephalitis virus 0v496 encephalitis virus Caprine arthritis NC_001463 vertebrates 1 Retroviridae,Lentivirus,Caprine arthritis — EU293537 encephalitis virus encephalitis virus Roccaverano Caprine kobuvirus NC_023422 vertebrates 1 Picornaviridae,Kobuvirus,Caprine kobuvirus — KF793927 Cardioderma polyomavirus NC_020067 vertebrates 1 Polyomaviridae,Polyomavirus,Cardioderma — JX520659 polyomavirus Cardiovirus BR/118/2006 NC_009448 vertebrates 1 Picornaviridae,Cardiovirus,Theilovirus — EU681177 ,NC_00136 6,NC_0108 10 Cardiovirus D/VI2223/2004 NC_009448 vertebrates 1 Picornaviridae,Cardiovirus,Theilovirus — EU681179 ,NC_00136 6,NC_0108 10 Cardiovirus D/VI2229/2004 NC_009448 vertebrates 1 Picornaviridae,Cardiovirus,Theilovirus — EU681176 ,NC_00136 6,NC_0108 10 Cardiovirus D/VI2273/2004 NC_009448 vertebrates 1 Picornaviridae,Cardiovirus,Theilovirus — EU681178 ,NC_00136 6,NC_0108 10 Caretta caretta NC_011530 vertebrates 1 Papillomaviridae,Dyozetapapillomavirus,Dyoz — EU493092 papillomavirus 1 etapapillomavirus 1 Carp picornavirus 1 NC_023162 vertebrates 1 Carp picornavirus 1 — KF306267 Cas-Br-E murine leukemia NC_001702 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — X57540 virus ,NC_00181 leukemia virus 9,NC_0013 62,NC_001 501 Castor canadensis NC_023178 vertebrates 1 Papillomaviridae,Castor canadensis — KCO20689 papillomavirus type 1 papillomavirus type 1 Caviid herpesvirus 2 NC_020231 vertebrates 2 Herpesviridae,Caviid herpesvirus 2 — AB592928,KC503762 Caviid herpesvirus 2 str, NC_020231 vertebrates 1 Herpesviridae,Caviid herpesvirus 2 — HG531783 CIDMTR Cebus albifrons NC_019854 vertebrates 1 Polyomaviridae,Polyomavirus,Cebus albifrons — JX159988 polyomavirus 1 polyomavirus 1 Cercopithecine herpesvirus NC_006560 vertebrates 1 Herpesviridae,Simplexvirus,Cercopithecine — AY714813 2 herpesvirus 2 Cercopithecine herpesvirus NC_012783 vertebrates 2 Herpesviridae,Cytomegalovirus,Cercopithecin — FJ483968,FJ483969 5 e herpesvirus 5 Cercopithecine herpesvirus NC_002686 vertebrates 1 Herpesviridae,Varicellovirus,Cercopithecine — AF275348 9 herpesvirus 9 Chaerephon polyomavirus NC_020065 vertebrates 1 Polyomaviridae,Polyomavirus,Chaerephon — JX520657 1 polyomavirus 1 Chelonia mydas NC_011530 vertebrates 1 Papillomaviridae,Dyozetapapillomavirus,Dyoz — EU493091 papillomavirus 1 etapapillomavirus 1 Chicken anemia virus NC_001427 vertebrates 52 Circoviridae,Gyrovirus,Chicken anemia virus — KF224936,DQ217400 ,KF224938,DQ12493 6,KF224935,AF31190 0,JX964755,DQ1416 73,KC414026,KF224 929,AY999018,AY83 9944,KF224934,DQ2 17401,AJ297685,AB0 27470,KF224937,DQ 141670,DQ141672,K F224926,AF311892,D 0141671,AF390102, EF176599,KF224931, U66304,AF390038,A Y040632,JF507715,D 0124935,FJ172347,D 0991394,M55918,D1 0068,KF224933,DQ1 24934,A48606,AF285 882,AB119448,L1476 7,KF224932,KF22492 8,JQ690762,AF39511 4,JX260426,U65414, AY843527,AJ297684, AY846844,AF475908, KF224930,KF224927 Chicken astrovirus NC_003790 vertebrates 1 Astroviridae,Avastrovirus,Chicken astrovirus — AB033998 Chimpanzee polyomavirus NC_014743 vertebrates 3 Polyomaviridae,Polyomavirus,Chimpanzee — FR692336,FR692334 polyomavirus ,FR692335 Cimodo virus NC_023420 vertebrates 1 Reoviridae, Cimodo virus seg. 1 KF880772 Circovirus NC_002361 vertebrates 1 Circoviridae,Circovirus,Columbid circovirus — HQ738642 NGchicken38/NGA/2009 Citrus endogenous NC_023153 vertebrates 3 Retroviridae,Citrus endogenous — KF800045,KF800044, pararetrovirus pararetrovirus KF800043 Classical swine fever virus NC_002657 vertebrates 59 Flaviviridae,Pestivirus,Classical swine fever — U45477,HQ148063,A virus 47690,JQ268754,EU 915211,GQ902941,K C851953,D49532,JX2 62391,AY775178,AY 578687,AF099102,E U857642,AF333000, GU324242,L49347,A Y259122,AF352565, GU233731,FJ529205, A16790,AF091507,G 0923951,AY646427, HQ380231,AX191158 ,EU789580,AF09244 8,D49533,AY382481, GU233733,EU497410 ,U45478,A77196,AY5 78688,X96550,AY568 569,AY663656,AY36 7767,GU233732,GQ1 22383,HM237795,AF 091661,AY805221,U9 0951,GU592790,JX2 18094,HQ148062,FJ2 65020,DQ127910,CQ 867021,GU233734,A F326963,AF531433,H 0148061,JQ595295, AY072924,HM175885 ,EU490425 Classical swine fever virus - NC_002657 vertebrates 1 Flaviviridae,Pestivirus,Classical swine fever — X87939 Alf ort/187 virus Classical swine fever virus - NC_002657 vertebrates 1 Flaviviridae,Pestivirus,Classical swine fever — JQ4358 Alfort/Tuebingen virus Classical swine fever virus - NC_002657 vertebrates 1 Flaviviridae,Pestivirus,Classical swine fever — M31768 Brescia virus Classical swine fever virus - NC_002657 vertebrates 1 Flaviviridae,Pestivirus,Classical swine fever — Z46258 C virus Classical swine fever virus NC_002657 vertebrates 1 Flaviviridae,Pestivirus,Classical swine fever — AF407339 39 virus Classical swine fever virus NC_002657 vertebrates 1 Flaviviridae,Pestivirus,Classical swine fever — AY554397 96TD virus Colobus guereza NC_004104 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — GU014532 papillomavirus type 1 pillomavirus 14 Columbid circovirus NC_002361 vertebrates 16 Circoviridae,Circovirus,Columbid circovirus — DQ915950,DQ91595 9,EU840176,DQ9159 57,DQ090944,DQ090 945,AF252610,DQ91 5958,AJ298230,JX90 1125,AJ298229,JN18 3455,DQ915961,DQ9 15962,DQ915956,DQ 915960 Common chimpanzee NC_001355 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF020905 papillomavirus 1 pillomavirus 10 Common marmoset foamy NC_001364 vertebrates 1 Retroviridae,Spumavirus,Simian foamy virus — GU356395 virus Common midwife toad NC_005946 vertebrates 1 Iridoviridae,Ranavirus,Frog virus 3 — JQ231222 ranavirus Common-moorhen NC_016996 vertebrates 1 Coronaviridae,Deltacoronavirus,Common- — JQ065049 coronavirus HKU21 moorhen coronavirus H KU21 Cosavirus A NC_012800 vertebrates 2 Picornaviridae,Cosavirus,Cosavirus A — FJ438902,GU968209 Cotia virus SPAn232 NC_016924 vertebrates 1 Poxviridae,Cotia virus — HQ6471 81 Cottontail rabbit NC_001541 vertebrates 4 Papillomaviridae,Kappapapillomavirus,Kappap — AJ404003,JF303889, papillomavirus apillomavirus 2 — AJ243287,K02708 Cowpox virus NC_003663 vertebrates 34 Poxviridae,Orthopoxvirus,Cowpox virus — KC813499,HQ420896 ,KC813496,KC81350 0,KC813492,DQ4375 93,HQ420895,HQ420 897,KC813505,X9435 5,HQ407377,KC8135 12,KC813501,KC813 493,KC813494,HQ42 0894,HQ420899,HQ4 20900,KC813510,KC 813491,KC813502,K C813495,KC813509, KC813511,AF482758 ,KC813503,HQ42089 3,KC813507,HQ4208 98,KC813506,KC813 508,KC813504,KC81 3498,KC813497 Crocuta crocuta NC_018575 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Crocu — HQ585856 papillomavirus 1 ta crocuta papillomavirus 1 Crow polyomavirus NC_007922 vertebrates 1 Polyomaviridae,Polyomavirus,Crow — DQ192570 polyomavirus Cyclovirus NC_014930 vertebrates 1 Circoviridae,Cyclovirus — HQ738644 NGchicken15/NGA/2009 NGchicken15/NGA/2009 Cyclovirus NC_014930 vertebrates 1 Circoviridae,Cyclovirus — HQ738643 NGchicken8/NGA/2009 NGchicken15/NGA/2009 Cyclovirus NC_014927 vertebrates 1 Circoviridae,Cyclovirus PKgoat21/PAK/2009 — HQ738634 PKbeef23/PAK/2009 Cyclovirus NC_014928 vertebrates 1 Circoviridae,Cyclovirus PKgoat11/PAK/2009 — HQ738636 PKgoat11/PAK/2009 Cyclovirus NC_014927 vertebrates 1 Circoviridae,Cyclovirus PKgoat21/PAK/2009 — HQ738635 PKgoat21/PAK/2009 Cyclovirus VN NC_021707 vertebrates 8 Circoviridae,Cyclovirus VN — KF031491,KF031469, KF031467,KF031471, KF031466,KF031465, KF031468,KF031470 Cyclovirus bat/USA/2009 NC_014929 vertebrates 1 Circoviridae,Cyclovirus bat/USA/2009 — HQ738637 Cynomolgus macaque NC_016154 vertebrates 1 Herpesviridae,Cytomegalovirus,Cynomolgus — JN227533 cytomegalovirus strain macaque cytomegalovirus strain Ottawa Ottawa Cyprinid herpesvirus 1 NC_019491 vertebrates 1 Alloherpesviridae,Cyprinivirus,Cyprinid — JQ815363 herpesvirus 1 Cyprinid herpesvirus 2 NC_019495 vertebrates 1 Alloherpesviridae,Cyprinivirus,Cyprinid — JQ815364 herpesvirus 2 Cyprinid herpesvirus 3 NC_009127 vertebrates 3 Alloherpesviridae,Cyprinivirus,Cyprinid — DQ657948,AP008984 herpesvirus 3 ,DQ177346 DG-75 Murine leukemia NC_001702 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — AF221065 virus ,NC_00181 leukemia virus 9,NC_0013 62,NC_001 501 Deer papillomavirus NC_001523 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Deltapap — M11910 illomavirus 2 Deerpox virus W-1170-84 NC_006967 vertebrates 1 Poxviridae,Cervidpoxvirus,Deerpox virus W- — AY689437 1170-84 Deerpox virus W-848-83 NC_006966 vertebrates 1 Poxviridae,Cervidpoxvirus,Deerpox virus W- — AY689436 848-83 Delphinus delphis NC_011109 vertebrates 1 Papillomaviridae,Upsilonpapillomavirus,Upsilon — GU117620 papillomavirus papillomavirus 1 Duck adenovirus 1 NC_001813 vertebrates 1 Adenoviridae,Atadenovirus,Duck adenovirus A — KF286430 Duck adenovirus A NC_001813 vertebrates 1 Adenoviridae,Atadenovirus,Duck adenovirus A — Y09598 Duck astrovirus 1 NC_012437 vertebrates 5 Astroviridae,Avastrovirus,Duck astrovirus — JX439643,FJ919225, GII,A FJ919228,FJ919226, FJ919227 Duck astrovirus C-NGB NC_012437 vertebrates 1 Astroviridae,Avastrovirus,Duck astrovirus — FJ434664 GII,A Duck circovirus NC_005053 vertebrates 47 Circoviridae,Circovirus,Duck circovirus — KC460533,HG532019 ,NC_00722 ,GU131340,EU49930 0,NC_0065 9,EU344803,HM1623 61 48,EU022375,HM162 351,KC460528,JX241 046,EU344805,GU13 1343,JX241045,EU34 4804,EU499310,JQ7 40360,KC460530,HM 162349,HM162352,K C460527,GU131341, JQ740361,KC460532 ,KC460526,KC46052 5,HM162347,KC4605 24,HM162345,KC460 529,KF726087,JQ740 362,KC460535,GU13 1342,EU499311,GQ4 23740,HM162353,GU 014543,GQ423747,H M162350,JQ740363, EU344806,HM16234 6,KC460534,EU3448 02,EU022374,KC460 531,EU344807 Duck coronavirus NC_010800 vertebrates 1 Coronaviridae,Gammacoronavirus,Avian — JF705860 ,NC_00145 coronavirus 1 Duck hepatitis A virus NC_008250 vertebrates 13 Picornaviridae,Avihepatovirus,Duck hepatitis — JX235698,JQ301467, A virus GU066820,EU352805 ,HQ654774,GU06682 4,GU066825,GU0668 23,GU944671,GU066 822,GUO66819,KC89 3553,GU066821 Duck hepatitis A virus 1 NC_008250 vertebrates 30 Picornaviridae,Avihepatovirus,Duck hepatitis — JF828983,JF828984, A virus DQ249299,JF914945, JQ316452,JF828989, JF828992,JF828996, JF829000,KC904272, JF828985,JF828987, JF828998,JF828994, JF828986,JF828997, JF828991,JF828993, JF828982,JF828999, DQ226541,JQ031262 ,JF828990,JQ804521 ,JF828988,JF828995, JX390984,JQ804522, JX390982,JX390983 Duck hepatitis A virus 3 NC_008250 vertebrates 6 Picornaviridae,Avihepatovirus,Duck hepatitis — DQ256132,KC993890 A virus ,JQ409566,JF835025 ,JF914944,JX312194 Duck hepatitis B virus NC_001344 vertebrates 43 Hepadnaviridae,Avihepadnavirus,Duck — DQ195079,AY494850 hepatitis B virus ,AF404406,AF047045 ,M60677,EU429326,X 60213,JX469898,KO1 834,AY433937,X5856 7,HM043822,AY2509 04,AY250901,HQ214 130,AY494851,X5856 8,X58569,AF493986, M32990,X74623,AY2 94028,EU429324,JX4 69896,AY250902,AY 392760,AY294656,H 0132730,AJQ06350, M32991,HM590411,D 0276978, M21953,AY 536371,AF505512,AY 521226,AY294029,A Y521227,HQ328779, X12798,JX469897,E U429325,AY250903 Duck hepatitis virus 1 NC_008250 vertebrates 44 Picornaviridae,Avihepatovirus,Duck hepatitis — FJ157172,FJ157179, A virus EU395435,EU888310 ,FJ436047,FJ157173, EU841005,DQ864514 ,FJ157174,EU371557 ,FJ496339,EU395436 ,FJ496344,DQ249301 ,EU395439,EF58520 0,EF427899,EF15131 2,EU395438,EU2640 72,FJ496341,EF3827 78,FJ157177,EF1513 13,FJ496340,FJ1571 76,DQ219396,EU877 916,EU395440,GQ13 0377,FJ496343,EF42 7900,EF093502,DQ8 86445,FJ157178,FJ4 96342,EU747874,FJ1 57175,EU753359,FJ9 71623,EU395437,FJ1 57180,EF417871,DQ 249300 Duck hepatitis virus 1 strain NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — EF067923 04G A virus Duck hepatitis virus 1 strain NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — EF067924 90D A virus Duck hepatitis virus AP- NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — DQ256133 04009 A virus Duck hepatitis virus AP- NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — DQ256134 04203 A virus Duck hepatitis virus DHV- NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — DQ812094 HS A virus Duck hepatitis virus DHV- NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — DQ812092 HSS A virus Duck hepatitis virus NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — HQ232302 FC64/CHN/2009 A virus Duck hepatitis virus G NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — EU755009 A virus Duck hepatitis virus GD NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — GQ122332 A virus Duck hepatitis virus SDQ1 NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — GQ485310 A virus Duck hepatitis virus SDQ2 NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — GQ485311 A virus Duck hepatitis virus YYF- NC_008250 vertebrates 1 Picornaviridae,Avihepatovirus,Duck hepatitis — DQ812093 2008 A virus Duck reovirus NC_015126 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF154110,KC493572 L1 ,JX478250 Duck reovirus NC_015127 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF154111,JX478251, L2 KC493573 Duck reovirus NC_015128 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF154112,KC493574 L3 ,JX478252 Duck reovirus NC_015129 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF154113,JX478253, M1 JX440513 Duck reovirus NC_015130 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF154114,JX478254, M2 JX440514 Duck reovirus NC_015131 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX478255,JX440512, M3 KF154115 Duck reovirus NC_015132 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF689545 S1 Duck reovirus NC_015133 vertebrates 8 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX852430,KF154117, S2 JX852432,JX852431, JX852434,JQ863359, JX852433,JX478257 Duck reovirus NC_015134 vertebrates 8 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF154118,JX826588, S3 KF163096,KF163098, JX478258,KF163097, KF163099,KF163095 Duck reovirus NC_015135 vertebrates 9 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX826589,KF163100, S4 KF163104,KF163102, JX478259,KF154119, KF163103,JQ922269, KF163101 Duck reovirus NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC312700 NP03/CHN/2009 L1 Duck reovirus NC_015127 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC312701 NP03/CHN/2009 L2 Duck reovirus NC_015128 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC312702 NP03/CHN/2009 L3 Ectromelia virus NC_004105 vertebrates 2 Poxviridae,Orthopoxvirus,Ectromelia virus — JO410350,AF012825 Eel picornavirus 1 NC_022332 vertebrates 1 Picornaviridae, Eel picornavirus 1 — KC843627 Eel virus European X NC_022581 vertebrates 1 Rhabdoviridae,Perhabdovirus,Anguillid — FN557213 rhabdovirus Eidolon helvum parvovirus NC_016744 vertebrates 1 Parvoviridae,Eidolon helvum parvovirus 1 — JQ037753 1 Eidolon polyomavirus 1 NC_020068 vertebrates 1 Polyomaviridae,Polyomavirus,Eidolon — JX520660 polyomavirus 1 Elephant endotheliotropic NC_020474 vertebrates 1 Herpesviridae,Proboscivirus,Elephantid — KC618527 herpesvirus 1A herpesvirus 1 Elephantid herpesvirus 1 NC_020474 vertebrates 2 Herpesviridae,Proboscivirus,Elephantid — KC462165,KC462164 herpesvirus 1 Encephalomyocarditis virus NC_001479 vertebrates 16 Picornaviridae,Cardiovirus,Encephalomyocard — M37588,AY296731,K itis virus F293299,FJ897755,E U780149,X87335,DO 288856,M22458,M22 457,EU780148,AF35 6822,X74312,DQ464 062,KF709977,M818 61,DQ464063 Endogenous mouse NC_001503 vertebrates 1 Retroviridae,Betaretrovirus,Mouse mammary — AF228550 mammary tumor virus Mtv1 tumor virus Enterovirus 103 NC_010415 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus J — FJQ07373 Enterovirus 103 NC_013695 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus J — FJQ07373 Enterovirus E NC_001859 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus E — DQ0214 Enterovirus E NC_021220 vertebrates 2 Picornaviridae,Enterovirus,Enterovirus F — DQ092795,DQ09279 4 Enterovirus F NC_021220 vertebrates 2 Picornaviridae,Enterovirus,Enterovirus F — KC748420,DQ092770 Enterovirus J NC_010415 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus J — AF414372 Enterovirus J NC_013695 vertebrates 2 Picornaviridae,Enterovirus,Enterovirus J — AF414372,AF414373 Enzootic nasal tumor virus NC_007015 vertebrates 5 Retroviridae,Betaretrovirus,Ovine enzootic — FJ744146,FJ744150, nasal tumor virus FJ744148,FJ744147, FJ744149 Enzootic nasal tumour virus NC_004994 vertebrates 2 Retroviridae,Betaretrovirus,Enzootic nasal — HM104174,AY197548 of goats tumour virus of goats Epinephelus tauvina NC_004136 vertebrates 2 Nodaviridae,Betanodavirus,Epinephelus seg. AF281657,AF318942 nervous necrosis virus tauvina nervous necrosis virus RNA 2 Epinephelus tauvina NC_004137 vertebrates 2 Nodaviridae,Betanodavirus,Epinephelus seg. AF326776,AF319555 nervous necrosis virus tauvina nervous necrosis virus RNA 1 Epsilonpapillomavirus 1 NC_004195 vertebrates 1 Papillomaviridae,Epsilonpapillomavirus,Epsilo — AF457465 npapillomavirus 1 Equid herpesvirus 1 NC_001491 vertebrates 3 Herpesviridae,Varicellovirus,Equid — AP012321,AY665713 herpesvirus 1 ,AY464052 Equid herpesvirus 2 NC_001650 vertebrates 1 Herpesviridae,Percavirus,Equid herpesvirus 2 — U20824 Equid herpesvirus 4 NC_001844 vertebrates 1 Herpesviridae,Varicellovirus,Equid — AF030027 herpesvirus 4 Equid herpesvirus 8 NC_017826 vertebrates 1 Herpesviridae,Varicellovirus,Equid — JQ343919 herpesvirus 8 Equid herpesvirus 9 NC_011644 vertebrates 1 Herpesviridae,Varicellovirus,Equid — AP010838 herpesvirus 9 Equine arteritis virus NC_002532 vertebrates 33 Arteriviridae,Arterivirus,Equine arteritis virus — GQ903801,X53459,A Y349168,GQ903807, JN211318,EU586274, EU252114,GQ90380 6,GQ903800,EU2521 13,GQ903798,GQ903 805,GQ903811,JN21 1316,GQ903795,GQ9 03810,EU586275,GQ 903804,GQ903809,G 0903802,A45589,JN 211320,EU586273,A Y349167,JN211319,J N211317,GQ903799, DQ846750,GQ90379 7,GQ903808,GQ9038 03,GQ903794,GQ903 796 Equine coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — EF446615 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 Equine foamy virus NC_002201 vertebrates 1 Retroviridae,Spumavirus,Equine foamy virus — AF201902 Equine infectious anemia NC_001450 vertebrates 26 Retroviridae,Lentivirus,Equine infectious — M87581,U01866,HM1 virus anemia virus 41912,HM141917,HM 141921,AF327877,H M141915,HM141918, HM141913,HM14191 9,AF327878,HM1419 14,JXQ03263,AF0163 16,HM141909,HM141 922,AF028231,HM14 1920,AF033820,M16 575,HM141911,HM14 1910,AF028232,HM1 41916,AF247394,HM 141923 Equine papillomavirus 2 NC_012123 vertebrates 2 Papillomaviridae,Dyoiotapapillomavirus,Equine — EU503122,HM46197 papillomavirus 2 3 Equine papillomavirus 3 NC_017862 vertebrates 1 Papillomaviridae,Equine papillomavirus 3 — GU384895 Equine papillomavirus type NC_020500 vertebrates 1 Papillomaviridae,Equine papillomavirus type — JQ965698 6 6 Equine pegivirus 1 NC_020902 vertebrates 1 Flaviviridae,Pegivirus,Equine pegivirus 1 — KC410872 Equine polyomavirus NC_017982 vertebrates 1 Polyomaviridae,Polyomavirus,Equine — JQ412134 polyomavirus Equine rhinitis A virus NC_003982 vertebrates 8 Picornaviridae,Aphthovirus,Equine rhinitis A — DQ268580,DQ27212 virus 8,DQ272577,X96870, DQ272127,JX294351 ,DQ272578,L43052 Equine rhinitis B virus 1 NC_003983 vertebrates 1 Picornaviridae,Erbovirus,Equine rhinitis B — X96871 virus Equine rhinitis B virus 2 NC_003983 vertebrates 1 Picornaviridae,Erbovirus,Equine rhinitis B — AF361253 virus Equus caballus NC_003748 vertebrates 1 Papillomaviridae,Zetapapillomavirus,Zetapapill — AF498323 papillomavirus 1 omavirus 1 Equus ferus caballus NC_020085 vertebrates 1 Papillomaviridae,Equus ferus caballus — JQ031032 papillomavirus type 4 papillomavirus type 4 Equus ferus caballus NC_020084 vertebrates 1 Papillomaviridae,Equus ferus caballus — JQ031033 papillomavirus type 5 papillomavirus type 5 Equus ferus caballus NC_020501 vertebrates 1 Papillomaviridae,Equus ferus caballus — JXQ35935 papillomavirus type 7 papillomavirus type 7 Erethizon dorsatum NC_006951 vertebrates 1 Papillomaviridae,Sigmapapillomavirus,Sigmap — AY684126 papillomavirus type 1 apillomavirus 1 Erinaceus europaeus NC_011765 vertebrates 1 Papillomaviridae,Dyoetapapillomavirus,Dyoeta — FJ379293 papillomavirus papillomavirus 1 Espirito Santo virus NC_016517 vertebrates 1 Birnaviridae,Espirito Santo virus seg. B JN589002 Espirito Santo virus NC_016518 vertebrates 1 Birnaviridae,Espirito Santo virus seg. A JN589003 European brown hare NC_002615 vertebrates 3 Caliciviridae,Lagovirus,European brown hare — KC832838,KC832839 syndrome virus syndrome virus ,Z69620 European catfish virus NC_017940 vertebrates 1 Incloviridae,Ranavirus,European catfish virus — JQ724856 European elk NC_001524 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Deltapap — M15953 papillomavirus illomavirus 1 Exogenous mouse NC_001503 vertebrates 2 Retroviridae,Betaretrovirus,Mouse mammary — AF228551,AF228552 mammary tumor virus tumor virus FBR murine osteosarcoma NC_001506 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — K02712 virus osteosarcoma virus Fathead minnow NC_023437 vertebrates 1 Picornaviridae,Fathead minnow picornavirus — KC465953 picornavirus Felid herpesvirus 1 NC_013590 vertebrates 1 Herpesviridae,Varicellovirus,Felid herpesvirus — FJ478159 1 Feline astrovirus 2 NC_022249 vertebrates 1 Astroviridae,Mamastrovirus,Feline astrovirus 2 — KF499111 Feline astrovirus Viseu NC_022249 vertebrates 1 Astroviridae,Mamastrovirus,Feline astrovirus 2 — KF374704 Feline bocavirus NC_017823 vertebrates 3 Parvoviridae,Bocavirus,Feline bocavirus — JQ692586,JQ692585, JQ692587 Feline bocavirus 2 NC_022800 vertebrates 1 Parvoviridae,Bocavirus,Feline bocavirus 2 — KF792837 Feline calicivirus NC_001481 vertebrates 28 Caliciviridae,Vesivirus,Feline calicivirus — KC835209,AY560117 ,JX519213,JX519209, JN210884,JN210886, AY560118,M86379,L 40021,JX519211,AY5 60113,JN210890,U13 992,GU214989,JN21 0889,AY560114,JN21 0888,DQ424892,JX5 19214,JN210887,AY5 60116,AF479590,JN2 10885,JX519212,D31 836,JX519210,AY560 115,AF109465 Feline coronavirus NC_002306 vertebrates 8 Coronaviridae,Alphacoronavirus, — JQ408980,GQ152141 Alphacoronavirus 1 ,KF530123,DQ01092 1,JN634064, DQ2863 89,DQ848678,EU186 072 Feline coronavirus RM NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938051 Alphacoronavirus 1 Feline coronavirus UU10 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938059 Alphacoronavirus 1 Feline coronavirus UU11 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938052 Alphacoronavirus 1 Feline coronavirus UU15 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938057 Alphacoronavirus 1 Feline coronavirus UU16 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938058 Alphacoronavirus 1 Feline coronavirus UU17 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ012367 Alphacoronavirus 1 Feline coronavirus UU18 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ012368 Alphacoronavirus 1 Feline coronavirus UU19 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ392470 Alphacoronavirus 1 Feline coronavirus UU2 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938060 Alphacoronavirus 1 Feline coronavirus UU20 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ392471 Alphacoronavirus 1 Feline coronavirus UU21 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ012369 Alphacoronavirus 1 Feline coronavirus UU22 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — GU553361 Alphacoronavirus 1 Feline coronavirus UU23 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — GU553362 Alphacoronavirus 1 Feline coronavirus UU24 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ012370 Alphacoronavirus 1 Feline coronavirus UU3 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938061 Alphacoronavirus 1 Feline coronavirus UU30 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ392472 Alphacoronavirus 1 Feline coronavirus UU31 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ012371 Alphacoronavirus 1 Feline coronavirus UU34 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ012372 Alphacoronavirus 1 Feline coronavirus UU4 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938054 Alphacoronavirus 1 Feline coronavirus UU40 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — HQ392469 Alphacoronavirus 1 Feline coronavirus UU47 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — JN183882 Alphacoronavirus 1 Feline coronavirus UU5 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938056 Alphacoronavirus 1 Feline coronavirus UU54 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — JN183883 Alphacoronavirus 1 Feline coronavirus UU7 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938053 Alphacoronavirus 1 Feline coronavirus UU8 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938055 Alphacoronavirus 1 Feline coronavirus UU9 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus, — FJ938062 Alphacoronavirus 1 Feline foamy virus NC_001871 vertebrates 8 Retroviridae,Spumavirus,Feline foamy virus — AJ564746,KC292055, U85043,AJ223851,K C292054,AB052797, Y08851,AJ564745 Feline immunodeficiency NC_001482 vertebrates 27 Retroviridae,Lentivirus,Feline — EF455611,EF455612, virus immunodeficiency virus EF455609,EU117991 ,EF455608,EF455603 ,M36968,AY713445,E U117992,M25381,AY 600517,X57002,U569 28,AF474246,DQ192 583,EF455607,DDQ2 9017,EF455606,EF45 5614, E43300,EF4556 13,EF455615,EF4556 10,EF455605, M5941 8,U11820,EF455604 Feline infectious peritonitis NC_002306 vertebrates 5 Coronaviridae,Alphacoronavirus,Alphacorona — JQ408981,KC461236 virus virus 1 ,KC461237,KC46123 5,AY994055 Feline leukemia virus NC_001940 vertebrates 3 Retroviridae,Gammaretrovirus,Feline — AB060732,M18247,A leukemia virus F052723 Feline papillomavirus NC_004765 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Lamb — AF377865 dapapillomavirus 1 Feline picornavirus NC_016156 vertebrates 5 Picornaviridae,Feline picornavirus — JN572118,JN572117, JN572116,JN572115, JN572119 Feline sakobuvirus A NC_022802 vertebrates 1 Picornaviridae,Feline sakobuvirus A — KF387721 Felis catus papillomavirus 4 NC_022373 vertebrates 1 Papillomaviridae,Taupapillomavirus,Felis — KF147892 catus papillomavirus 4 Felis catus papillomavirus- NC_021472 vertebrates 1 Papillomaviridae,Taupapillomavirus,Felis — JX972168 3 catus papillomavirus 3 Felis domesticus NC_004765 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Lamb — AF480454 papillomavirus type 1 dapapillomavirus 1 Ferret papillomavirus NC_022253 vertebrates 1 Papillomaviridae,Ferret papillomavirus — KF006988 Finch circovirus NC_008522 vertebrates 1 Circoviridae,Circovirus,Finch circovirus — DQ845075 Finch polyomavirus NC_007923 vertebrates 1 Polyom aviridae, Polyomavirus,Finch — DQ192571 polyomavirus Florida woods cockroach- NC_020206 vertebrates 1 Circoviridae,Florida woods cockroach- — JX569794 associated cyclovirus associated cyclovirus Foot-and-mouth disease NC_004004 vertebrates 8 Picornaviridae,Aphthovirus,Foot-and-mouth — AM503966,XQ0871,A virus disease virus M409190,AM503965, M10975,AJQ07572,AJ 007347,AF154271 Foot-and-mouth disease NC_004004 vertebrates 86 Picornaviridae,Aphthovirus,Foot-and-mouth — KC440881,HQ832576 virus-type A disease virus ,AY593784,AY59380 2,HQ832585,HQ8325 79,HQ832582,JF7498 43,AY593770,AY593 765,HQ832581,KC58 8943,AY593753,AY5 93788,AY593793,AY 593803,HQ632773,A Y593760,AY593774, AY593769,HQ832587 ,AY593776,AY59375 7,AY593751,AY5937 54,HQ832588,HQ832 592,AY593780,AY59 3758,KC440882,X748 12,JF749841,HQ8325 91,AY593779,JN0067 22,HQ832586,AY593 783,AY593771,AY59 3759,AY593762,AY5 93772,HM854025,HM 854023,HQ832583,H 0832589,GQ406250, AY593789,HQ832584 ,HM854024,AY59379 1,AY593756,GQ4062 52,AY593764,HQ832 580,GQ406249,AY59 3790,HQ832578,AY5 93773,AY593794,AY 593786,AY593778,A Y593767,AY593792, HQ268509,AY593785 ,HQ832577,AY59377 5,AY593761,AY5937 82,AY593763,GQ406 251,JF749848,AY593 768,GQ406248,AY59 3801,AY593777,HM8 54022,HQ832590,AY 593755,AY593766,A Y593781,GQ406247, EF117837,AY593752, HM854021,AY593787 Foot-and-mouth disease NC_004004 vertebrates 46 Picornaviridae,Aphthovirus,Foot-and-mouth — GU125646,AY593798 virus-type Asia 1 disease virus ,DQ989320,DQ98931 4,EF149009,DQ5334 83,DQ989312,DQ989 308,DQ989319,DQ98 9311,DQ989309,KC4 62884,DQ989322,AY 593796,DQ989307,D 0989310,EF149010, AY593799,HQ632774 ,GU125645,AY30499 4,DQ989317,DQ9893 03,JN006719,DQ989 305,DQ989313,DQ98 9323,AY390432,DQ9 89316,AY593800,JF7 39177,DQ989315,JN 006720,AY687333,D 0989306,HQ631363, DQ989318,GU93168 2,AY593795,FJ90680 2,DQ989321,AY6873 34,KC412634,EF614 458,AY593797,DQ98 9304 Foot-and-mouth disease NC_004004 vertebrates 16 Picornaviridae,Aphthovirus,Foot-and-mouth — AF274010,AJ133358, virus-type C disease virus DQ409184,AJ133357 ,AY593810,DQ40919 0,DQ409191,DQ4091 83,DQ409187,AM409 325,AJ133359,DQ40 9186,DQ409189,DQ4 09185,FJ824812,DQ4 09188 Foot-and-mouth disease NC_004004 vertebrates 200 Picornaviridae,Aphthovirus,Foot-and-mouth — JX869181,DQ404158 virus-type 0 ,JXQ40485,AJ320488, disease virus JXQ40491,KF501486, DQ404173,EU448380 ,JX869178,AY593833 ,JX570654,HM22966 1,AY593815,DQ4041 70,AF506822,FJ5423 69,KF694737,HQ632 770,DQ404169,KF69 4738,JX570644,KF11 2889,EU448377,KF6 94743,EU448381,DQ 404167,DQ404159,J X570647,JN998085, GU125648,AY593821 ,KF112888,JXQ40486 ,JXQ40490,KF694739 ,HQ268524,DQ40417 4,KF112883,AY59381 6,FJ542370,AJ53914 1,KF112887,FJ17566 6,AY593830,AJ53913 7,JXQ66664,EU44837 2,JX570646,EU44837 3,GU384683,EU4483 76,AJ633821,FJ1756 62,KF694742,JX8691 83,AY359854,JXQ404 87,DQ404160,EU214 601,JX570649,JX570 641,FJ542366,AY593 835,KF694734,AJ539 136,AY593812,HQ63 2772,JX570640,HQ0 09509,DQ404164,KF 112879,FJ175661,JX 570642,DQ404176,D 0404179,JXQ40501,A J539140,KF112886,A Y593817,KF694733,J XQ40492,JXQ40494,E U448371,AY593832,J X869187,KF501487,A Y593824,GU125647, DQ404161,JXQ40497 ,AY593819,JXQ40488 ,JX869177,DQ40416 8,JX869180,DQ4041 71,AY593822,JX5706 45,GU125650,DQ404 165,HQ412603,AF02 6168,AJ539139,GU1 25649,FJ175664,AY5 93823,JX869188,AY3 33431,JX570651,AY5 93825,JX570648,KF6 94736,AY593811,JX8 69186,EU448375,AF 511039,DQ404162,J N998086,AF308157, EF614457,JXQ40499, HQ632769,JX570638 ,KF985189,FJ542371 ,AJ539138,EU448378 ,DQ404175,EU44837 4,AY593829,DQ4041 78,DQ478937,AY593 827,JQ900581,AY593 834,KF112881,JX570 655,JX570643,JX869 185,AB079061,AY59 3813,HQ632771,DQ4 04180,DQ404163,KF 501488,JX570639,FJ 542365,JF749851,JX 869182,JXQ40495,EU 448370,JXQ40493,D 0404177,JQ973889,J XQ40496,AY593828, AY593836,AY593820 ,KF112882,EU44836 8,FJ542372,KF11288 5,KF694744,GU3846 82,JX570650,KF1128 84,EU448369,DQ248 888,JXQ40489,AY593 831,DQ404166,DQ11 9643,EF175732,JX57 0653,AY593837,FJ17 5663,KC503937,JXQ6 6665,JX869184,DQ4 04172,JX869179,KF6 94745,AY593826,KF6 94741,EU448379,HM 008917,KF112880,JX 040498,FJ542367,AY 593814,KF694740,JX 570652,FJ175665,AY 593818,FJ542368,DQ 478936,HQ632768,K F694735,KC440883,J XQ40500 Foot-and-mouth disease NC_004004 vertebrates 10 Picornaviridae,Aphthovirus,Foot-and-mouth — AY593838,AY593845 virus-type SAT 1 disease virus ,AY593839,AY59384 1,AY593844,JF74986 0,AY593840,AY5938 43,AY593842,AY593 846 Foot-and-mouth disease NC_004004 vertebrates 11 Picornaviridae,Aphthovirus,Foot-and-mouth — AY593849,JXQ14256, virus-type SAT 2 disease virus AF540910,JF749862, AY593848,KC440884 ,JF749861,AY593847 ,AJ251473,JF749864, JXQ14255 Foot-and-mouth disease NC_004004 vertebrates 4 Picornaviridae,Aphthovirus,Foot-and-mouth — AY593852,AY593851 virus-type SAT 3 disease virus ,AY593850,AY59385 3 Foot-and-mouth disease NC_004004 vertebrates 2 Picornaviridae,Aphthovirus,Foot-and-mouth — AY593804,AY593805 virus C1 disease virus Foot-and-mouth disease NC_004004 vertebrates 2 Picornaviridae,Aphthovirus,Foot-and-mouth — AY593806,AY593807 virus C3 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — AY593808 virus C4 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — AY593809 virus C5 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — AY317098 virus HKN/2002 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — AY686687 virus 0/ES/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — AF377945 virus 0/SKR/2000 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552688 virus 0/UKG/3952/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552693 virus 0/UKG/4014/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552689 virus 0/UKG/4141/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552694 virus 0/UKG/4998/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552696 virus 0/UKG/5470/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552697 virus 0/UKG/5681/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552690 virus 0/UKG/7039/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552692 virus 0/UKG/7299/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552691 virus 0/UKG/9161/2001 disease virus Foot-and-mouth disease NC_004004 vertebrates 1 Picornaviridae,Aphthovirus,Foot-and-mouth — EF552695 virus 0/UKG/9443/2001 disease virus Fowl adenovirus B NC_021221 vertebrates 1 Adenoviridae,Aviadenovirus,Fowl adenovirus — KC493646 B Fowl adenovirus A NC_001720 vertebrates 1 Adenoviridae,Aviadenovirus,Fowl adenovirus — U46933 A Fowl adenovirus C NC_015323 vertebrates 2 Adenoviridae,Aviadenovirus,Fowl adenovirus — HE608152,GU188428 C Fowl adenovirus D NC_000899 vertebrates 1 Adenoviridae,Aviadenovirus,Fowl adenovirus — AF083975 D Fowl adenovirus E NC_014969 vertebrates 1 Adenoviridae,Aviadenovirus,Fowl adenovirus — GU734104 E Fowlpox virus NC_002188 vertebrates 1 Poxviridae,Avipoxvirus,Fowlpox virus — AF198100 Fowlpox virus (isolate HP- NC_002188 vertebrates 1 Poxviridae,Avipoxvirus,Fowlpox virus — AJ581527 438[Munich]) Francolinus leucoscepus NC_013117 vertebrates 1 Papillomaviridae,Dyoepsilonpapillomavirus,Dy — EU188799 papillomavirus 1 oepsilonpapillomavirus 1 Friend murine leukemia NC_001702 vertebrates 4 Retroviridae,Gammaretrovirus,Murine — D88386,XQ2794,A420 virus ,NC_00181 leukemia virus 90,M93134 9,NC_0013 62,NC_001 501 Fringilla coelebs NC_004068 vertebrates 1 Papillomaviridae,Etapapillomavirus,Etapapillo — AY057109 papillomavirus mavirus 1 Frog adenovirus 1 NC_002501 vertebrates 1 Adenoviridae,Siadenovirus,Frog adenovirus A — AF224336 Frog virus 3 NC_005946 vertebrates 1 Incloviridae,Ranavirus,Frog virus 3 — AY548484 Fujinami sarcoma virus NC_001403 vertebrates 2 Retroviridae,Alpharetrovirus,Fujinami sarcoma — AF033810,JQ2194 virus GB virus A NC_001837 vertebrates 3 Flaviviridae,Pegivirus,Pegivirus A — U22303,AF023425,A F023424 Gallid herpesvirus 1 NC_006623 vertebrates 21 Herpesviridae,Iltovirus,Gallid herpesvirus 1 — JX458822,JN596962, JN580317,JN542533, JX646898,JN804826, JN580312,U80762,H 0630064,JN804827,J N580313,JX646899,J N580315,JN580314,J N542535,JQ083494,J N542534,JN596963,J 0083493,JN542536,J N580316 Gallid herpesvirus 2 NC_002229 vertebrates 14 Herpesviridae,Mardivirus,Gallid herpesvirus 2 — AF147806,AF243438, JQ806362,JQ809692, AY510475,JQ836662, JQ820250,EU499381 ,JX844666,DQ53034 8,JQ809691,EF52339 0,JQ314003,JQ80636 1 Gallid herpesvirus 2 strain NC_002229 vertebrates 1 Herpesviridae,Mardivirus,Gallid herpesvirus 2 — JF742597 814 Gallid herpesvirus 3 NC_002577 vertebrates 2 Herpesviridae,Mardivirus,Gallid herpesvirus 3 — AB049735,HQ840738 Gammapapillomavirus NC_014469 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — HM011570 HPV127 mapapillomavirus HPV127 Gibbon ape leukemia virus NC_001885 vertebrates 2 Retroviridae,Gammaretrovirus,Gibbon ape — U60065,M26927 leukemia virus Giraffe coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — EF424622 US/0H3-TC/2006 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 Giraffe coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — EF424623 US/0H3/2003 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 Goatpox virus G20-LKV NC_004003 vertebrates 1 Poxviridae,Capripoxvirus,Goatpox virus — AY077836 Goatpox virus Pellor NC_004003 vertebrates 1 Poxviridae,Capripoxvirus,Goatpox virus — AY077835 Golden ide reovirus NC_010588 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus G seg. 5 AF450324 Goose adenovirus 4 NC_017979 vertebrates 1 Adenoviridae,Aviadenovirus,Goose — JF510462 adenovirus A Goose circovirus NC_003054 vertebrates 24 Circoviridae,Circovirus,Goose circovirus — DQ192283,DQ19227 9,AY633653,DQ1922 82,AF536933,GU320 569,DQ192285,AF53 6934,AF536932,AF53 6939,AF536941,AF53 6940,AF536936,DQ1 92287,DQ192280,AJ 304456,AF536935,AF 536931,AF536938,AF 536937,AF418552,D 0192281,DQ192286, DQ192284 Goose hemorrhagic NC_004800 vertebrates 6 Polyomaviridae,Polyomavirus,Goose — HQ681904,HQ68190 polyomavirus hemorrhagic polyomavirus 3,AY140894,HQ6819 05,JF304775,HQ6819 02 Goose orthoreovirus NC_015126 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145328 L1 Goose orthoreovirus NC_015127 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145329 L2 Goose orthoreovirus NC_015128 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145330 L3 Goose orthoreovirus NC_015129 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145331 M1 Goose orthoreovirus NC_015130 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145332 M2 Goose orthoreovirus NC_015131 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145333 M3 Goose orthoreovirus NC_015132 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145334 S1 Goose orthoreovirus NC_015133 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145335 S2 Goose orthoreovirus NC_015134 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145336 S3 Goose orthoreovirus NC_015135 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. JX145337 S4 Goose parvovirus NC_001701 vertebrates 12 Parvoviridae,Dependovirus,Goose parvovirus — EU583390,KC178571 ,EU583389,JF333590 ,KC184133,KC99673 0,U25749,EU583391, EU583392,KC996729 ,HQ891825,KC47806 6 Grass carp hemorrhagic NC_005167 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 2 AF284502 virus Grass carp hemorrhagic NC_005168 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 3 AF284503 virus Grass carp hemorrhagic NC_005170 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 5 AF251262 virus Grass carp hemorrhagic NC_005171 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 6 AF239175 virus Grass carp hemorrhagic NC_005172 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 7 AF239174 virus Grass carp hemorrhagic NC_005174 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. 9 AF284504 virus Grass carp hemorrhagic NC_005175 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. AF236688 virus 10 Grass carp hemorrhagic NC_005176 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus C seg. AF234321 virus 11 Grass carp reovirus NC_005166 vertebrates 4 Reoviridae,Aquareovirus,Aquareovirus C seg. 1 AF260511,GQ896334 ,KC847320,HQ23119 8 Grass carp reovirus NC_005167 vertebrates 4 Reoviridae,Aquareovirus,Aquareovirus C seg. 2 HQ231199,AF260512 ,GQ896335,KC84732 1 Grass carp reovirus NC_005168 vertebrates 4 Reoviridae,Aquareovirus,Aquareovirus C seg. 3 AF260513,HQ231200 ,GU350742,KC84732 2 Grass carp reovirus NC_005169 vertebrates 4 Reoviridae,Aquareovirus,Aquareovirus C seg. 4 KC847323,HQ231201 ,GU350743,AF40339 0 Grass carp reovirus NC_005170 vertebrates 4 Reoviridae,Aquareovirus,Aquareovirus C seg. 5 AF403391,GQ896336 ,HQ231202,KC84732 4 Grass carp reovirus NC_005171 vertebrates 5 Reoviridae,Aquareovirus,Aquareovirus C seg. 6 JN206664,AF403392, GQ896337,KC84732 5,HQ231208 Grass carp reovirus NC_005172 vertebrates 4 Reoviridae,Aquareovirus,Aquareovirus C seg. 7 HQ231203,AF403393 ,GU350744,KC84732 6 Grass carp reovirus NC_005173 vertebrates 5 Reoviridae,Aquareovirus,Aquareovirus C seg. 8 AF403394,AF259053, GU350745, HQ23120 4,KC847327 Grass carp reovirus NC_005174 vertebrates 4 Reoviridae,Aquareovirus,Aquareovirus C seg. 9 GU350746,KC847328 ,AF403395,HQ23120 5 Grass carp reovirus NC_005175 vertebrates 5 Reoviridae,Aquareovirus,Aquareovirus C seg. GU350747,HQ23120 10 6,KC847329,AF4033 96,JN206665 Grass carp reovirus NC_005176 vertebrates 4 Reoviridae,Aquareovirus,Aquareovirus C seg. KC847330,HQ231207 11 ,AF403397,GU35074 Ground squirrel hepatitis NC_001484 vertebrates 8 Hepadnaviridae,Orthohepadnavirus,Ground — K02715 virus squirrel hepatitis virus Grouper iridovirus NC_006549 vertebrates 1 Iridoviridae,Ranavirus,Singapore grouper — AY666015 iridovirus Gull circovirus NC_008521 vertebrates 2 Circoviridae,Circovirus,Gull circovirus — DQ845074,JQ685854 Gyrovirus 4 NC_018401 vertebrates 1 Circoviridae,Gyrovirus,Gyrovirus 4 — JX310702 Gyrovirus GyV3 NC_017091 vertebrates 1 Circoviridae,Gyrovirus,Gyrovirus GyV3 — JQ308210 Gyrovirus Tu243 NC_022788 vertebrates 1 Circoviridae,Gyrovirus,Gyrovirus Tu243 — KF294861 Gyrovirus Tu789 NC_022789 vertebrates 1 Circoviridae,Gyrovirus,Gyrovirus Tu789 — KF294862 H-1 parvovirus NC_001358 vertebrates 1 Parvoviridae,Parvovirus,H-1 parvovirus — XQ1457 HMO Astrovirus A NC_013443 vertebrates 1 Astroviridae,Mamastrovirus,HMO Astrovirus A — GQ415660 Halastavi arva RNA virus NC_016418 vertebrates 1 Halastavi arva RNA virus — JN000306 Hamster polyomavirus NC_001663 vertebrates 8 Polyomaviridae,Polyomavirus,Hamster — JXQ36360,JX416850, polyomavirus M26281,XQ2449,JX4 16853,JX416852,J X4 16849,JX416851 Hepatitis A virus NC_001489 vertebrates 77 Picornaviridae,Hepatovirus,Hepatitis A virus — AB839696,AY644337 ,EU526089,X75215,M 20273,X75214,AB618 529,FJ360733,AB839 694,HQ437707,AB27 9732,EF406359,DQ9 91030,AB020565,KC 182588,X75216,EF40 6363,AB793726,AB2 79734,EU251188,JQ 655151,AB279733,A B258387,AB839692, AB839693,KC182589 ,EF406358,AF314208 ,DQ991029,FJ360731 ,HM769724,AB79372 5,EU011791,AB8198 70,K02990,AB020566 ,AB020568,FJ360734 ,KC182590,FJ360735 ,JQ425480,AY644670 ,EF207320,AF268396 ,KC182587,AF51253 6,AB618531,EU1313 73,M59809,AB83969 5,AJ299464,EF40636 0,AB300205,KF77384 2,AF357222,AF48532 8,AB020564,M14707, AB819869,AB425339 ,DQ646426,EF40636 1,AB020569,AB0205 67,AB839697,AB279 735,FJ360730,FJ360 732,KF569906,M166 32,EU526088,M5980 8,EF406357,AY64467 6,X83302,EF406362, M59810 Hepatitis GB virus B NC_001655 vertebrates 10 Flaviviridae,Hepatitis GB virus B — AB630364,AF179612, AB630361,AB630360 ,U22304,AB630359,A J277947,AB630363,A B630362,AB630358 Heron hepatitis B virus NC_001486 vertebrates 1 Hepadnaviridae,Avihepadnavirus,Heron — M22056 hepatitis B virus Hipposideros bat NC_018871 vertebrates 6 Coronaviridae,Alphacoronavirus,Bat — JQ989266,JQ989272, coronavirus H KU10 coronavirus H KU10 JQ989269,JQ989273, JQ989267,JQ989268 Hirame rhabdovirus NC_005093 vertebrates 2 Rhabdoviridae,Novirhabdovirus,H irame — AF104985,FJ376982 rhabdovirus Human T-cell lymphotropic NC_001815 vertebrates 1 Retroviridae,Deltaretrovirus,Primate T- — Y13051 virus type 2b ,NC_00148 lymphotropic virus 2 8 Human T-lymphotropic NC_000858 vertebrates 18 Retroviridae,Deltaretrovirus,Primate T- — JX891479,L36905,AF virus 1 ,NC_00143 lymphotropic virus 1 259264,JQ2029,HQ60 6 6138,D13784,JX8914 78,AF042071,AF1391 70,U19949,HQ60613 7,AY563954,AY5639 53,KC807984,L03561 ,L02534,AB513134,L 03562 Human T-lymphotropic NC_001815 vertebrates 10 Retroviridae,Deltaretrovirus,Primate T- — GU212854,AF074965 virus 2 ,NC_00148 lymphotropic virus 2 ,AF139382,L20734,A 8 F326584,X89270, L11 456,AF412314,AF326 583, Y14365 Human T-lymphotropic NC_003323 vertebrates 4 Retroviridae,Deltaretrovirus,Primate T- — EU649782,DQ093792 virus 3 lymphotropic virus 3 ,DQ462191,GQ46360 Human T-lymphotropic NC_011800 vertebrates 2 Retroviridae,Deltaretrovirus,Human T- — EF488483 virus 4 lymphotropic virus 4 Human TMEV-Iike NC_009448 vertebrates 1 Picornaviridae,Cardiovirus,Theilovirus — GU595289 cardiovirus ,NC_00136 6,NC_0108 10 Human adenovirus 4 NC_003266 vertebrates 6 Adenoviridae,Mastadenovirus,Human — AY594254,KF006344, ,NC_01782 adenovirus E AY594253,AY599837 5 ,AY599835,AY45865 Human adenovirus 41 NC_001454 vertebrates 3 Adenoviridae,Mastadenovirus,Human — DQ315364,AB728839 adenovirus F ,HM565136 Human adenovirus 52 NC_006879 vertebrates 1 Adenoviridae,Mastadenovirus,Human — DQ923122 adenovirus G Human adenovirus E NC_003266 vertebrates 2 Adenoviridae,Mastadenovirus,Human — AY487947,EF371058 ,NC_01782 adenovirus E 5 Human adenovirus F NC_001454 vertebrates 1 Adenoviridae,Mastadenovirus,Human — L19443 adenovirus F Human betacoronavirus 2c NC_019843 vertebrates 1 Coronaviridae,Betacoronavirus,Middle East — JX869059 EMC/2012 respiratory syndrome coronavirus Human betacoronavirus 2c NC_019843 vertebrates 1 Coronaviridae,Betacoronavirus,Middle East — KC667074 England-Qatar/2012 respiratory syndrome coronavirus Human betacoronavirus 2c NC_019843 vertebrates 1 Coronaviridae,Betacoronavirus,Middle East — KC776174 Jordan-N 3/2012 respiratory syndrome coronavirus Human bocavirus 4 NC_007018 vertebrates 1 Parvoviridae,Parvovirus,Human parvovirus 4 — HQ113143 Human coronavirus 0C43 NC_010327 vertebrates 6 Coronaviridae,Betacoronavirus, — AY903459,AY585229 ,NC_00773 Betacoronavirus 1 ,AY585228,JN129835 2,NC_0051 ,JN129834,AY903460 47,NC_003 045 Human cosavirus A2 NC_012800 vertebrates 1 Picornaviridae,Cosavirus,Cosavirus A — FJ438903 Human cosavirus B NC_012801 vertebrates 1 Picornaviridae,Cosavirus,Human cosavirus B — FJ438907 Human cosavirus D NC_012802 vertebrates 1 Picornaviridae,Cosavirus,Human cosavirus D — FJ438908 Human cosavirus E NC_012798 vertebrates 1 Picornaviridae,Cosavirus,Human cosavirus E — FJ555055 Human cyclovirus NC_021568 vertebrates 1 Circoviridae,Human cyclovirus VS5700009 — KC771281 VS5700009 Human enteric coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — FJ415324 4408 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 Human erythrovirus V9 NC_004295 vertebrates 1 Parvoviridae,Erythrovirus,Human erythrovirus — AJ249437 V9 Human foamy virus NC_001364 vertebrates 2 Retroviridae,Spumavirus,Simian foamy virus — Y07724,Y07725 Human gyrovirus type 1 NC_015630 vertebrates 1 Circoviridae,Gyrovirus,Human gyrovirus type — FR823283 1 Human herpesvirus 6A NC_001664 vertebrates 2 Herpesviridae,Roseolovirus,Human — KC465951,X83413 herpesvirus 6A Human herpesvirus 6B NC_000898 vertebrates 2 Herpesviridae,Roseolovirus,Human — AB021506,AF157706 herpesvirus 6B Human papillomavirus NC_001457 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — JX413107 mapapillomavirus 1 Human papillomavirus NC_012485 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — JX413110 mapapillomavirus 7 Human papillomavirus NC_012486 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — JX413106 mapapillomavirus 8 Human papillomavirus NC_014955 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Human — JX444072 papillomavirus 132-like viruses Human papillomavirus-1 NC_001356 vertebrates 1 Papillomaviridae,Mupapillomavirus,Mupapillo — V01116 mavirus 1 Human papillomavirus-18 NC_001357 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — XQ5015 pillomavirus 7 Human papillomavirus-2 NC_001352 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X55964 pillomavirus 4 Human papillomavirus-54 NC_001676 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF436129 pillomavirus 13 Human papillomavirus-72 NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X94164 pillomavirus 3 Human papillomavirus-81 NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AJ620209 pillomavirus 3 Human papillomavirus-83 NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF151983 pillomavirus 3 Human papillomavirus- NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AY395706 cand62 pillomavirus 3 Human papillomavirus- NC_001357 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF131950 cand85 pillomavirus 7 Human papillomavirus- NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF349909 cand86 pillomavirus 3 Human papillomavirus- NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AJ400628 cand87 pillomavirus 3 Human papillomavirus- NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF436128 cand89 pillomavirus 3 Human papillomavirus- NC_001595 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF419318 cand91 pillomavirus 8 Human papillomavirus 109 NC_012485 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — EU541441 mapapillomavirus 7 Human papillomavirus 112 NC_012486 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — EU541442 mapapillomavirus 8 Human papillomavirus 116 NC_013035 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — FJ804072 mapapillomavirus 9 Human papillomavirus 121 NC_014185 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — GQ845443 mapapillomavirus 10 Human papillomavirus 54 NC_001676 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — U37488 pillomavirus 13 Human papillomavirus 61 NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — U31793 pillomavirus 3 Human papillomavirus NC_001576 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — FN547152 SIBX9 pillomavirus 2 Human papillomavirus type NC_001576 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74465 10 pillomavirus 2 Human papillomavirus type NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — DQ080083 102 pillomavirus 3 Human papillomavirus type NC_004104 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — DQ080082 106 pillomavirus 14 Human papillomavirus type NC_012213 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — FM212639 108 ,NC_00818 mapapillomavirus 6 8,NC_0081 89 Human papillomavirus type NC_001355 vertebrates 49 Papillomaviridae,Alphapapillomavirus,Alphapa — FN907959,FN907964 11 pillomavirus 10 ,HE574703,FN87002 1,HE611271,HE6112 63,HE611259,HE611 273,HE962365,HE61 1264,JN644142,FN87 0022,HE611267,JQ7 73412,EU918768,HE 611260,HE962023,H E574704,HE611268, HE962366,FN907963 ,M14119,JQ773409,H E574701,FN907961,J N644141,FN907957, FN907960,HE962024 ,HE611270,JQ77341 1,FR872717,HE6112 66,HE611274,HE574 705,JQ773410,HE61 1272,HE611269,HE9 62368,HE611265,HE 611258,FN907958,H E611261,JQ773408, HE962367,HE611262 ,FN907962,HE57470 2,HE962025 Human papillomavirus type NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — GQ244463 114 pillomavirus 3 Human papillomavirus type NC_001576 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — GQ246950 117 Human papillomavirus type NC_012486 vertebrates 1 pillomavirus 2 — GQ845441 119 mapapillomavirus 8 Human papillomavirus type NC_012485 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — GQ845445 123 mapapillomavirus 7 Human papillomavirus type NC_014952 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Human — GU225708 128 n papillomavirus type 128 Human papillomavirus type NC_014953 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Human — GU233853 129 n papillomavirus type 129 Human papillomavirus type NC_001355 vertebrates 2 Papillomaviridae,Alphapapillomavirus,Alphapa — X62843,DQ344807 13 pillomavirus 10 Human papillomavirus type NC_014185 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — GU117630 130 mapapillomavirus 10 Human papillomavirus type NC_014954 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Human — GU117631 131 papillomavirus type 131 Human papillomavirus type NC_014955 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Human — GU117632 132 papillomavirus 132-like viruses Human papillomavirus type NC_014185 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — GU117633 133 mapapillomavirus 10 Human papillomavirus type NC_014956 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Human — GU117634 134 papillomavirus type 134 Human papillomavirus type NC_014955 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Human — GU129016 148 papillomavirus 132-like viruses Human papillomavirus type NC_012485 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — GU117629 149 mapapillomavirus 7 Human papillomavirus type NC_001526 vertebrates 119 Papillomaviridae,Alphapapillomavirus,Alphapa — HQ644258,HQ64425 16 pillomavirus 9 9,HQ644243,AB8186 87,JQ004097,HQ644 262,HQ644298,FJ610 149,HQ644249,FJ610 152,HQ644264,AB88 9490,HQ644263,AF5 36179,HQ644283,HQ 644292,HQ644261,H 0644273,AY686580, HQ644296,JQ004096 ,AB818688,AB81869 0,JQ004094,AF47250 9,FJ610146,JN56530 2,HQ644239,AB8894 92,HQ644240,HQ644 250,HQ644286,HQ64 4269,HQ644278,HQ6 44280,HQ644288,FJ6 10151,HQ644294,HQ 644248,HQ644241,H 0644238,HQ644236, HQ644265,HQ64428 7,HQ644268,HQ6442 99,AF402678,AY6865 81,FJ610147,HQ6442 53,AF534061,HQ644 254,HM057182,HQ64 4293,FJ610150,HQ64 4284,HQ644260,HQ6 44242,JQ004093,HQ 644291,FJQ06723,AB 889489,JQ004095,H 0644276,HQ644247, HQ644277,HQ64424 4,HQ644281,HQ6442 79,HQ644275,AF536 180,JQ004099,JQ067 944,HQ644289,FJ610 148,HQ644234,JN56 5303,AB889491,HQ6 44257,HQ644255,AB 889494,AY686579,H 0644272,AB818689, AY686582,HQ644245 ,AF472508,HQ64428 5,AF125673,HQ6442 70,HQ644295,HQ644 290,HQ644266,HQ64 4252,HQ644251,HQ6 44267,AB818693,JQO 67943,HQ644271,HQ 644237,AB889488,H 0644256,HQ644235, JQ004092,HQ644246 ,JQ004098,AB889493 ,U89348,HQ644282,A B818692,AX800450, HQ644274,AY686583 ,K02718,AY686584,E U918764,AB818691, EU118173,HQ644297 Human papillomavirus type NC_022892 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Huma — KC862318 167 n papillomavirus type 167 Human papillomavirus type NC_012486 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — KC862317 168 mapapillomavirus 8 Human papillomavirus type NC_001357 vertebrates 46 Papillomaviridae,Alphapapillomavirus,Alphapa — GQ180792,EF202155 18 pillomavirus 7 ,EF202149,EF202148 ,KC470211,KC47021 6,EF202150,KC4702 30,EF202153,GQ180 788,KC470214,GQ18 0786,KC470221,KC4 70218,KC470228,GQ 180784,KC470227,K C470229,KC470226, KC470217,KC470213 ,GQ180790,KC47020 9,GQ180791,EF2021 43,EF202145,GQ180 789,KC470222,KC47 0215,KC470220,EF2 02152,EF202154,AY2 62282,EF202151,KC 470225,GQ180787,E F202147,GQ180785, KC470212,KC470219 ,KC470210,EF20214 4,KC470223,EF2021 46,KC470224,KC470 208 Human papillomavirus type NC_001356 vertebrates 1 Papillomaviridae,Mupapillomavirus,Mupapillo — U06714 1a mavirus 1 Human papillomavirus type NC_001352 vertebrates 4 Papillomaviridae,Alphapapillomavirus,Alphapa — EF362755,EF362754, 2 pillomavirus 4 EF117891,EF117890 Human papillomavirus type NC_001583 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74472 26 pillomavirus 5 Human papillomavirus type NC_001352 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74473 27 pillomavirus 4 Human papillomavirus type NC_001352 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AB211993 27b pillomavirus 4 Human papillomavirus type NC_001576 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — U31783 28 pillomavirus 2 Human papillomavirus type NC_001576 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — U31784 29 pillomavirus 2 Human papillomavirus type NC_001576 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74462 3 pillomavirus 2 Human papillomavirus type NC_001593 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74474 30 pillomavirus 6 Human papillomavirus type NC_001526 vertebrates 23 Papillomaviridae,Alphapapillomavirus,Alphapa — JQ4353,HQ537667,H 31 pillomavirus 9 0537678,HQ537674, HQ537669,HQ53766 8,HQ537679,HQ5376 70,HQ537671,HQ537 681,HQ537673,HQ53 7687,HQ537666,HQ5 37677,HQ537685,HQ 537682,HQ537683,H 0537680,HQ537672, HQ537676,HQ53767 5,HQ537684,HQ5376 86 Human papillomavirus type NC_001586 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74475 32 pillomavirus 1 Human papillomavirus type NC_001526 vertebrates 23 Papillomaviridae,Alphapapillomavirus,Alphapa — HQ537706,HQ53770 33 pillomavirus 9 2,HQ537701,HQ5376 98,M12732,HQ53769 4,HQ537696,HQ5377 07,HQ537692,HQ537 688,HQ537697,HQ53 7689,HQ537703,EU9 18766,HQ537693,HQ 537700,HQ537704,H 0537690,HQ537691, HQ537695,HQ53769 9,HQ537705,A12360 Human papillomavirus type NC_001587 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74476 34 pillomavirus 11 Human papillomavirus type NC_001526 vertebrates 28 Papillomaviridae,Alphapapillomavirus,Alphapa — HQ537725,HQ53770 35 pillomavirus 9 8,HQ537715,HQ5377 30,HQ537711,HQ537 726,JX129488,HQ53 7720,HQ537718,HQ5 37713,HQ537717,HQ 537729, HQ537723,H 0537714, HQ537722, M74117,HQ537710,H 0537716, HQ537719, JX129486,HQ537728 ,HQ537721 ,HQ53771 2,HQ537727,HQ5377 09,HQ537724,JX129 487,JX129485 Human papillomavirus type NC_001526 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74477 35H pillomavirus 9 Human papillomavirus type NC_001357 vertebrates 20 Papillomaviridae,Alphapapillomavirus,Alphapa — KC470243,KC470238 39 pillomavirus 7 ,KC470239,KC47024 0,KC470247,KC4702 31,KC470241,KC470 236,M62849,KC4702 42,KC470232,KC470 244,KC470246,KC47 0237,KC470235,KC4 70249,KC470234,KC 470245,KC470248,K C470233 Human papillomavirus type NC_001457 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — X70827 4 mapapillomavirus 1 Human papillomavirus type NC_001595 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74478 40 pillomavirus 8 Human papillomavirus type NC_001354 vertebrates 1 Papillomaviridae,Nupapillomavirus,Nupapillom — X56147 41 avirus 1 Human papillomavirus type NC_001586 vertebrates 3 Papillomaviridae,Alphapapillomavirus,Alphapa — GQ472847,A28090,M 42 pillomavirus 1 73236 Human papillomavirus type NC_001595 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AJ620205 43 pillomavirus 8 Human papillomavirus type NC_001355 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — U31788 44 pillomavirus 10 Human papillomavirus type NC_001357 vertebrates 24 Papillomaviridae,Alphapapillomavirus,Alphapa — EF202158,EF202157, 45 pillomavirus 7 KC470251,EF202165 ,EF202162,KC47025 5,EF202167,EF20216 1,KC470252,KC4702 50,X74479,EF202163 ,KC470256,EF20216 6,EF202160,KC4702 59,KC470258,EF202 156,KC470253,KC47 0260,KC470257,EF2 02159,EF202164,KC 470254 Human papillomavirus type NC_001690 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — U31789 48 mapapillomavirus 2 Human papillomavirus type NC_001691 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — U31790 50 mapapillomavirus 3 Human papillomavirus type NC_001583 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — M62877 51 pillomavirus 5 Human papillomavirus type NC_001526 vertebrates 26 Papillomaviridae,Alphapapillomavirus,Alphapa — HQ537751,HQ53773 52 pillomavirus 9 6,HQ537734,HQ5377 42,HQ537746,AB819 274,HQ537732,HQ53 7745,AB819273,HQ5 37738,HQ537743,AB 819272,HQ537733,H 0537740,GQ472848, HQ537750,HQ53774 7,HQ537735,HQ5377 41,HQ537749,HQ537 739,HQ537737,X744 81,HQ537744,HQ537 731,HQ537748 Human papillomavirus type NC_001593 vertebrates 16 Papillomaviridae,Alphapapillomavirus,Alphapa — EF546474,EF546479, 53 pillomavirus 6 EF546469,EF546470, X74482,EF546478,E F546480,EF546473,E F546482,EF546475,E F546472,EF546481,E F546471,EF546477, GQ472849,EF546476 Human papillomavirus type NC_001355 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — U31791 55 pillomavirus 10 Human papillomavirus type NC_001593 vertebrates 7 Papillomaviridae,Alphapapillomavirus,Alphapa — EF177178,EF177181, 56 pillomavirus 6 EF177177,EF177179, X74483,EF177176, E F177180 Human papillomavirus type NC_001352 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X55965 57 pillomavirus 4 Human papillomavirus type NC_001352 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — U37537 57b pillomavirus 4 Human papillomavirus type NC_001352 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AB361563 57c pillomavirus 4 Human papillomavirus type NC_001526 vertebrates 45 Papillomaviridae,Alphapapillomavirus,Alphapa — KC860271,HQ537758 58 pillomavirus 9 ,HQ537757,EU91876 5,AB819278,HQ5377 53,FJ385267,HQ5377 63,HQ537775,HQ537 769,FJ385261,FJ385 265,GQ472850,HQ53 7768,AB819279,HQ5 37771,HQ537755,HQ 537760,HQ537762,D 90400,HQ537770,AB 819276,FJ385268,HQ 537759,FJ385266,KC 860269,HQ537754,FJ 385262,AB819277,H 0537777,HQ537766, HQ537765,HQ53776 4,HQ537761,AB8192 75,HQ537767,FJ3852 63,HQ537756,HQ537 752,FJ385264,HQ537 776,HQ537773,HQ53 7774,HQ537772,KC8 60270 Human papillomavirus type NC_001357 vertebrates 8 Papillomaviridae,Alphapapillomavirus,Alphapa — KC470262,KC470261 59 pillomavirus 7 ,X77858,KC470266,K C470265,KC470263, KC470264,EU918767 Human papillomavirus type NC_001355 vertebrates 168 Papillomaviridae,Alphapapillomavirus,Alphapa — HG793909,HE962032 6 pillomavirus 10 ,HG793933,HG79391 7,HG793935,HG7938 81,HG793851,HG793 906,JN252321,HG79 3918,HG793900,HG7 93875,HG793847,HG 793852,HG793908,H G793868,HG793878, HG793890,HG79383 9,FR751329,HG7938 26,HG793843,HG793 821,FR751324,JN252 320,HG793874,HG79 3856,HG793925,HG7 93937,HG793840,HG 793849,HG793894,H G793882,HG793866, HG793896,HG79388 6,HG793865,HG7938 69,FR751320,HG793 844,HG793905,FR75 1322,HE962028,HG7 93902,FR751325,HG 793885,HG793887,H G793815,HG793888, HG793841,HG79385 8,HG793860,HG7939 29,HG793926,HG793 829,FR751328,HG79 3870,HG793863,HG7 93919,HG793811,HG 793897,HG793936,H G793838,HG793895, FR751323,HG793810 ,HG793879,HG79385 3,JN252318,HG7939 27,HG793912,HG793 922,HG793837,HG79 3824,FR751331,HG7 93848,HG793873,HG 793939,JN252323,H G793842,HG793931, JN252319,HG793823 ,HG793889,HG79381 6,FR751327,AF09293 2,HG793827,FR7513 26,HG793845,HG793 884,HG793817,HG79 3924,HG793813,HG7 93859,HG793893,HG 793830,JN252314,H G793836,FR751336, HG793818,HG79392 3,HG793877,HG7939 13,HG793862,HG793 901,HG793892,HG79 3911,HE962026,FR7 51337,HG793861,HG 793910,HG793828,H G793867,HG793832, HG793857,HG79393 2,HG793903,HG7939 30,FR751338,HG793 864,HG793822,HG79 3914,HG793898,HG7 93876,HG793920,HE 962029,HG793814,F R751332,JN252322, HG793871,FR751335 ,HG793928,HG79383 4,JN252317,HG7938 33,HG793915,HG793 835,FR751334,HG79 3916,HG793921,HG7 93904,HG793872,JN 252315,HG793812,H E962031,HE962027, HG793846,HG79390 7,HG793934,HG7938 55,HG793831,HE962 030,HG793880,FR75 1321,HG793891,HG7 93899,HG793938,FR 751330,HG793820,H G793809,JN252316, HG793819,HG79388 3,HG793850,FR7513 33,HG793854,HG793 825 Human papillomavirus type NC_001693 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — U31792 60 mapapillomavirus 4 Human papillomavirus type NC_001458 vertebrates 1 Papillomaviridae,Mupapillomavirus,Mupapillo — X70828 63 mavirus 2 Human papillomavirus type NC_001457 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — X70829 65 mapapillomavirus 1 Human papillomavirus type NC_001593 vertebrates 11 Papillomaviridae,Alphapapillomavirus,Alphapa — EF177186,U31794,E 66 pillomavirus 6 F177184,EF177188,E F177185,EF177183,E F177191,EF177187,E F177182,EF177189,E F177190 Human papillomavirus type NC_001526 vertebrates 8 Papillomaviridae,Alphapapillomavirus,Alphapa — HQ537781,HQ53778 67 pillomavirus 9 2,HQ537778,HQ5377 84,HQ537780,HQ537 783,HQ537779,D212 08 Human papillomavirus type NC_001357 vertebrates 19 Papillomaviridae,Alphapapillomavirus,Alphapa — KC470277,KC470271 68 pillomavirus 7 ,KC470276,EU91876 9,KC470270,KC4702 82,KC470274,KC470 278,KC470267,KC47 0275,KC470272,KC4 70279,KC470268,KC 470273,KC470269,K C470283,GQ472851, KC470281,KC470280 Human papillomavirus type NC_001357 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — DQ080079 68a pillomavirus 7 Human papillomavirus type NC_001357 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — FR751039 68b pillomavirus 7 Human papillomavirus type NC_001583 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AB027020 69 pillomavirus 5 Human papillomavirus type NC_001355 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — L41216 6a pillomavirus 10 Human papillomavirus type NC_001355 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — XQ0203 6b pillomavirus 10 Human papillomavirus type NC_001595 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X74463 7 pillomavirus 8 Human papillomavirus type NC_001357 vertebrates 9 Papillomaviridae,Alphapapillomavirus,Alphapa — KC470289,KC470290 70 pillomavirus 7 ,KC470291,U21941,K C470288,KC470287, KC470286,KC470284 ,KC470285 Human papillomavirus type NC_004104 vertebrates 5 Papillomaviridae,Alphapapillomavirus,Alphapa — AB040456,AY330623 71 pillomavirus 14 ,AY330620,AY33062 2,AY330621 Human papillomavirus type NC_001587 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X94165 73 pillomavirus 11 Human papillomavirus type NC_001355 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF436130 74 pillomavirus 10 Human papillomavirus type NC_001576 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — Y15175 77 pillomavirus 2 Human papillomavirus type NC_001583 vertebrates 2 Papillomaviridae,Alphapapillomavirus,Alphapa — AB027021,AF293961 82 pillomavirus 5 Human papillomavirus type NC_001694 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — AF293960 84 pillomavirus 3 Human papillomavirus type NC_010329 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — EF467176 88 mapapillomavirus 5 Human papillomavirus type NC_004104 vertebrates 2 Papillomaviridae,Alphapapillomavirus,Alphapa — AY057438,AB542808 90 pillomavirus 14 Human papillomavirus type NC_001576 vertebrates 3 Papillomaviridae,Alphapapillomavirus,Alphapa — AB201226,GU117628 94 pillomavirus 2 ,AJ620211 Human papillomavirus type NC_001457 vertebrates 1 Papillomaviridae,Gammapapillomavirus,Gam — AJ620210 95 mapapillomavirus 1 Human papillomavirus type NC_001357 vertebrates 3 Papillomaviridae,Alphapapillomavirus,Alphapa — DQ080080,EF202168 97 pillomavirus 7 ,EF436229 Human papillomavirus type NC_001576 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — KC138720 XS2 pillomavirus 2 Human parechovirus NC_001897 vertebrates 3 Picornaviridae, Parechovi rus,Human — EU022171,KJ152442, parechovirus AJQ05695 Human parechovirus 1 NC_001897 vertebrates 18 Picornaviridae, Parechovi rus,Human — EF051629,S45208,G parechovirus 0183021,GQ183035, GQ183023,FJ840477 ,GQ183019,JX44135 5,GQ183022, FM 1785 58,KC769584,GQ183 018,GQ183024,JX57 5746,GQ183020,GQ1 83025,L02971 ,GQ18 3034 Human parechovirus 2 NC_001897 vertebrates 1 Picornaviridae, Parechovi rus,Human — AF055846 parechovirus Human parechovirus 3 NC_001897 vertebrates 13 Picornaviridae, Parechovi rus,Human — GQ183031,AJ889918 parechovirus ,GQ183026,JX82660 7,GQ183027,AB6680 ,29,GQ183032,GQ183 028,JX682576,AB084 913,GQ183030,GQ18 3033,GQ183029 Human parechovirus 4 NC_001897 vertebrates 3 Picornaviridae, Parechovi rus,Human — DQ315670,AM23575 parechovirus 0,AB433629 Human parechovirus 5 NC_001897 vertebrates 2 Picornaviridae, Parechovi rus,Human — AM235749,JXQ50181 parechovirus Human parechovirus 6 NC_001897 vertebrates 4 Picornaviridae, Parechovi rus,Human — AB252582,EU077518 parechovirus ,FJ888592,EU024629 Human parechovirus 7 NC_001897 vertebrates 1 Picornaviridae, Parechovi rus,Human — EU556224 parechovirus Human parechovirus 8 NC_001897 vertebrates 1 Picornaviridae, Parechovi rus,Human — EU716175 parechovirus Human parechovirus type 1 NC_001897 vertebrates 1 Picornaviridae, Parechovirus,Human — FM242866 PicoBank/HPeV1/a parechovirus Human parvovirus 4 NC_007018 vertebrates 7 Parvoviridae,Parvovirus,Human parvovirus 4 — DQ873387,DQ87338 8,EU175856,EU1758 ,55,AY622943,EU874 248,DQ873389 Human polyomavirus 10 NC_018102 vertebrates 1 Polyomaviridae,Polyomavirus,MW — JX262162 polyomavirus Human polyomavirus 12 NC_020890 vertebrates 1 Polyom avi ridae, Polyomavirus,Human — JX308829 polyomavirus 12 Human polyomavirus 9 NC_015150 vertebrates 2 Polyom avi ridae, Polyom avi rus,Human — KC831440,HQ696595 polyomavirus 9 Human rhinovirus C NC_009996 vertebrates 16 Picornaviridae,Enterovirus,Rhinovirus C — JF317015,JN798567, JF317014,JF317016, ,JN205461,JX291115, GU219984,EU840952 ,JF317013,JF317017, JQ245968,EF582386, JN837688,EF582385, DQ875932,EF582387 Human rhinovirus C strain NC_009996 vertebrates 1 Picornaviridae,Enterovirus,Rhinovirus C — GQ323774 QCE Human rhinovirus C3 NC_009996 vertebrates 1 Picornaviridae,Enterovirus,Rhinovirus C — EF186077 Human rhinovirus C35 NC_009996 vertebrates 1 Picornaviridae,Enterovirus,Rhinovirus C — JF436925 Human spumaretrovirus NC_001364 vertebrates 1 Retroviridae,Spumavirus,Simian foamy virus — U21247 Ictalund herpesvirus 1 NC_001493 vertebrates 1 Alloherpesviridae,Ictalurivirus,Ictalurid — M75136 herpesvirus 1 Infectious bronchitis virus NC_010800 vertebrates 71 Coronaviridae,Gammacoronavirus,Avian — DQ288927,DQ00133 ,NC_00145 coronavirus 9,AY338732,GU3933 1 35,GU393333,FJ9047 17,FJ904723,JQ9776 ,98,FJ904720,GU3933 37,EU714028,FJ9047 16,HM245924,JF274 479,GQ504720,GU39 3332,GU393334,FJ90 4721,FJ904713,JX19 5175,JX195177,JF82 8981,JF893452,AY51 4485,GQ504723,FJ8 88351,JX195178,GU 393331,GU393338,FJ 807652,GQ504722,E U526388,GQ504721, DQ646405,JX195176 ,FJ904722,KF574761 ,KF377577,EU63785 4,JF330899,JX89790 0,DQ834384,AY6415 76,DQ001338,AY851 295,EU817497,GQ50 4725,KC013541,EU4 18975,HM245923,FJ 904719,JF330898,KC 136209,JF828980,AY 319651,JQ977697,E U418976,FJ904714,G U393336,KC506155, EU714029,KC008600 ,KF411040,FJ904715 ,HQ850618,KF41104 1,KC119407,FJ90471 8,AY692454,GQ5047 24,HQ848267 Infectious bronchitis virus NC_010800 vertebrates 1 Coronaviridae,Gammacoronavirus,Avian — FN430414 ITA/90254/2005 ,NC_00145 coronavirus 1 Infectious bronchitis virus NC_010800 vertebrates 1 Coronaviridae,Gammacoronavirus,Avian — FN430415 NGA/A116E7/2006 ,NC_00145 coronavirus 1 Infectious bursal disease NC_004178 vertebrates 93 Birnaviridae,Avibirnavirus, Infectious bursal seg. A EF418034,AF051837, virus disease virus GQ166970,DQ40324 8,AF533670,AF09217 1,AF165150,JQ41101 2,EU162089,JF90770 2,EF418036,DQ0499, AF240686,GQ451330 ,EU595669,JX134483 ,DQ0867,AJ427340,A Y598356,EU595670, AJ310185,EF418035, AY099456,AM167550 ,AY462026,AF140705 ,EU595667,EU59566 8,AY319768,AF36277 6,EU184687,FJ69513 8,AY134874,Z21971, X84034,AY323952,A F321054,AF527039,E U595672,DQ906921, D83985,EF646853,D 00869,DQ927040,AY 444873,AF092943,AF 194428,EU162088,AJ 879932,AY368653,D 0088175,AY665672, XQ3993,AF165151,A Y918950,AF109154,E U595671,JX134485, M97346,AF508176,A Y918948,EF517528,A F247006,AF499929,A F362773,AF443294,D 0927042,AF322444,J 0403646,FJ695139,J F811920,L42284,AF3 62747,AF133904,AF3 21055,AF362771,AY0 29166,AF321056,DQ 778035,EU184689,A F165149,JN585293,D 49706,AJ318896,EF4 18033,M66722,AY46 2027,EU184685,U30 818,JF907703,X9276 0,AM111353,GQ1669 72 Infectious bursal disease NC_004179 vertebrates 87 Birnaviridae,Avibirnavirus,Infectious bursal seg. B AY598355,EU162092 virus disease virus ,AM167551,AJ31889 7,JQ403647,AF49397 9,EU162093,AY4593 20,AY459321,AF3224 45,GQ166971,JX134 484,AY134875,U3081 9,EU162095,EU5956 75,EU595677,AF092 944,EF576658,EU16 2091,JF907704,AB36 8971,AF362748,AJ88 0090,AB368969,M19 336,AY103464,X9276 1,EU595676,AF1339 05,AF203880,EU162 094,JQ411013,GQ45 1331,AF083092,AF36 2774,X84035,U62661 ,EF688065,AY654284 ,AM111354,JF907705 ,AF499930,AF083093 ,AJ496637,D49707,A F194429,EU595678, AF362772,DQ906922 ,EF646854,EU16209 0,AF083094,DQ6798 11,EU595674,EF517 529,U20950,AF52703 8,DQ118374,FJQ4015 9,JF811921,DQ67981 3,GQ452269,AY0994 57,DQ927041 ,DQ679 814,DQ403249,AY91 8949,EU595673,DQ6 79812,AF527040,JX1 34486,EU184690,AJ3 10186,AY705393,AY 918947,JN411134,AF 362770,AF362775,AF 240687,DQ166818,E U184686,AY368654, AY029165,DQ927043 , L19502,EU184688 Infectious bursal disease NC_004178 vertebrates 1 Birnaviridae,Avibirnavirus, Infectious bursal seg. A X16107 virus CU-1 disease virus Infectious hematopoietic NC_001652 vertebrates 5 Rhabdoviridae,Novirhabdovirus, Infectious — GQ413939,JX649101 necrosis virus hematopoietic necrosis virus ,X89213,L40883,HM4 61966 Infectious pancreatic NC_001915 vertebrates 29 Birnaviridae,Aquabirnavirus,Infectious seg. A DQ536090,AY780919 necrosis virus pancreatic necrosis virus ,AJ622822,AY780923 ,AY780921,M18049,A Y374435,AY379738, AY780918,AY354519 ,AY379737,DQ0701,A Y379736,AY780922, AY379742,DQ536091 ,AY823632,AY35452 0,AY379744,AY2837 80,AF078668,AY7809 24,U56907,D26526,E F493156,AY780920,A Y354521,AY379735, AY379740 Infectious pancreatic NC_001916 vertebrates 20 Birnaviridae,Aquabirnavirus,Infectious seg. B AY379741,AY379739 necrosis virus pancreatic necrosis virus ,AY780930,AY37974 3,AY823633,M58756, AY129664,AY354522 ,AY780927,AY35452 3,AY354524,M58757, AY780929,AY780931 ,AY780925,AY78092 6,AY780928,D26527, AJ622823,AF078669 Infectious pancreatic NC_001916 vertebrates 1 Birnaviridae,Aquabirnavirus,Infectious seg. B EU665685 necrosis virus-Mexico pancreatic necrosis virus Infectious salmon anemia NC_006497 vertebrates 44 Orthomyxoviridae,Isavirus,Infectious salmon seg. B DQ022085,DQ78528 virus anemia virus 3,DQ785275,DQ7852 86,DQ003603,DQ785 276,DQ003600,AF26 2386,EU118822,AF3 15063,DQ785278,AF 404340,DQ785281,D 0003601,AF262382, DQ785279,AF262388 ,AF262380,DQ00360 7,AF262383,AY74439 5,DQ785285,AJQ122 85,DQ785277,AF262 389,DQ058660,DQ00 3602,DQ785274,AF3 12317,Y10404,AF312 315,DQ003606,DQ78 5280,AF262384,DQO 03605,AF262381,DQ 785284,AF262387,D 0785282,DQ003604, DQ785273,AJ242016 ,AF262385,AF312316 Infectious salmon anemia NC_006498 vertebrates 8 Orthomyxoviridae,Isavirus,Infectious salmon seg. 7 AY044132,AJ306487, virus anemia virus AF404341,AF429990, AF328627,DQ673253 ,AF429989,DQ67325 4 Infectious salmon anemia NC_006499 vertebrates 9 Orthomyxoviridae,Isavirus,Infectious salmon seg. 6 AF404342,JN711062, virus anemia virus AF220607,JN711065, AY059402,JN711074, JN711093,JN711096, JN711060 Infectious salmon anemia NC_006500 vertebrates 38 Orthomyxoviridae,Isavirus,Infectious salmon seg. 5 JN711056,JN711023, virus anemia virus DQ465047,JN711047 ,JN711040,AF429986 ,JN711041,JN711021 ,JN711054,DQ46504 3,JN711030,JN71102 4,JN711019,DQ4650 44,AJ277461,DQ440 507,JN711043,AF404 343,AF429988,JN711 044,DQ440508,AF42 9987,JN711053,JN71 1026,JN711055,JN71 1049,DQ465045,JN7 11045,JN711042,JN7 11050,JN711033,JN7 11046,JN711036,DQ 465046,JN711022,JN 711051,DQ440506,J N711031 Infectious salmon anemia NC_006501 vertebrates 25 Orthomyxoviridae,Isavirus,Infectious salmon seg. 4 DQ785227,DQ78522 virus anemia virus 3,DQ785221,DQ5206 00,DQ785218,DQ785 224,AY744391,DQ78 5217,HM172539,DQ7 85222,DQ520601,DQ 785229,DQ785219,D 0785228,DQ520602, DQ520598,AF404344 DQ520597,DQ78522 5,DQ785220,DQ7852 26,EU118818,DQ785 230,AF306548,DQ52 0599 Infectious salmon anemia NC_006502 vertebrates 92 Orthomyxoviridae,Isavirus,Infectious salmon seg. 3 JN710910,JN710861, virus anemia virus JN710908,JN710864, JN710894,JN710866, JN710854,JN710843, JN710915,JN710889, JN710839,JN710871, JN710846,JN710904, JN710918,JN710907, JN710840,JN710913, JN710881,JN710916, JN710858,JN710853, JN710919,JN710872, JN710844,JN710883, JN710903,AJ276858, JN710887,JN710906, JN710835,JN710842, HM172538,JN710837 ,AF404345,JN710873 ,JN710914,JN710867 ,JXQ70881,JN710890 ,JN710905,JN710879 ,JN710896,JN710841 ,JN710851,JN710891 ,JN710859,JN710836 ,JN710885,JN710880 ,JN710895,JN710878 ,JN710869,JN710874 ,JN710850,JN710865 ,JN710870,JN710900 ,JN710884,JN710882 ,JN710849,JN710875 ,JN710888,JN710902 ,JN710886,JN710911 ,JN710838,JN710857 ,AF306549,JN710899 ,JN710898,JN710897 ,JN710921,JN710920 ,JN710856,JN710912 ,JN710845,JN710917 ,JN710848,JN710847 ,JN710901,JN710892 ,JN710909,JN710876 ,JN710862,JN710893 ,JN710852,JN710860 ,JN710868,JN710863 ,JN710877,JN710855 Infectious salmon anemia NC_006503 vertebrates 23 Orthomyxoviridae,Isavirus,Infectious salmon seg. 2 DQ676937,DQ78520 virus anemia virus 0,DQ785198,DQ7851 95,DQ785191,DQ785 199,DQ785194,DQ52 0596,DQ785190,HM1 72537,AJ242808,EU1 18816,DQ785189,DQ 520595, DQ785197,D 0785192,AF404346, AJQ02475,AY744389, DQ785202, DQ78519 6,DQ785193,DQ7852 01 Infectious salmon anemia NC_006505 vertebrates 32 Orthomyxoviridae,Isavirus,Infectious salmon seg. 1 DQ785181,AY860813 virus anemia virus ,AY168787,DQ78518 8,AY860812,AY9545 28,AY373381,DQ785 183,DQ785176,DQ78 5186,AY373379,AY3 73380,DQ785175,AY 860811,DQ785185,D 0785182,AY860808, AY373382,DQ785180 ,DQ785187,AY86080 9,AY860810,AJ51440 3,DQ785179,AY7443 88,EU118815,DQ785 178,AY954527,HM17 2536,DQ785184,DQ7 85177,AY954526 Infectious spleen and NC_003494 vertebrates 1 Indoviridae,Megalocytivirus,Infectious spleen — AF371960 kidney necrosis virus and kidney necrosis virus Jaagsiekte sheep retrovirus NC_001494 vertebrates 6 Retroviridae,Betaretrovirus,Jaagsiekte sheep — AF105220,DQ838494 retrovirus ,A27950,C0964469,A F357971,M80216 Japanese eel endothelial NC_015123 vertebrates 1 Japanese eel endothelial cells-infecting virus — AB543063 cells-infecting virus Jembrana disease virus NC_001413 vertebrates 1 Retroviridae,Lentivirus,Bovine — U21603 immunodeficiency virus Koala retrovirus NC_021704 vertebrates 1 Retroviridae,Gammaretrovirus,Koala — KC779547 retrovirus Kobuvirus pig/JY- NC_011829 vertebrates 1 Picornaviridae,Kobuvirus,Aichivirus C — GU292559 2010a/CHN ,NC_01676 9 Kobuvirus sewage NC_001918 vertebrates 1 Picornaviridae,Kobuvirus,Aichivirus A — JQ898342 Kathmandu Labidocera aestiva NC_017843 vertebrates 1 Circoviridae,Circovirus,Labidocera aestiva — JF912805 circovirus circovirus Lactate dehydrogenase- NC_001639 vertebrates 2 Arteriviridae,Arterivirus, Lactate — U15146,L13298 elevating virus dehydrogenase-elevating virus Lagenorhynchus acutus NC_011109 vertebrates 1 Papillomaviridae,Upsilonpapillomavirus,Upsilo — GU117624 papillomavirus npapillomavirus 1 Lambdapapillomavirus 3 NC_013237 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Lamb — FJ492744 dapapillomavirus 3 Large yellow croaker NC_003494 vertebrates 1 Iridoviridae,Megalocytivirus,Infectious spleen — AY779031 iridovirus and kidney necrosis virus Lelystad virus NC_001961 vertebrates 1 Arteriviridae,Arterivirus,Porcine reproductive — M96262 and respiratory syndrome virus Ljungan virus NC_003976 vertebrates 3 Picornaviridae,Parechovirus,Ljungan virus — AF538689,EF202833, AF327920 Ljungan virus strain 145SL NC_003976 vertebrates 2 Picornaviridae,Parechovirus,Ljungan virus — AF327922,FJ384560 Ljungan virus strain 174F NC_003976 vertebrates 1 Picornaviridae,Parechovirus,Ljungan virus — AF327921 Lulll virus NC_004713 vertebrates 1 Parvoviridae,Parvovirus,Lulll virus — M81888 Lumpy skin disease virus NC_003027 vertebrates 1 Poxviridae,Capripoxvirus,Lumpy skin disease — AF409138 virus Lumpy skin disease virus NC_003027 vertebrates 1 Poxviridae,Capripoxvirus,Lumpy skin disease — AF325528 NI-2490 virus Lumpy skin disease virus NC_003027 vertebrates 1 Poxviridae,Capripoxvirus,Lumpy skin disease — AF409137 NW-LW virus Lymphocystis disease virus- NC_005902 vertebrates 1 Iridoviridae,Lymphocystivirus,Lymphocystis — AY380826 isolate China disease virus-isolate China Lymphocystis disease virus NC_001824 vertebrates 1 Iridoviridae,Lymphocystivirus,Lymphocystis — L63545 1 disease virus 1 Lynx rufus papillomavirus NC_004765 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Lamb — AY904722 type 1 dapapillomavirus 1 MW polyomavirus NC_018102 vertebrates 11 Polyomaviridae,Polyomavirus,MW — JQ898292,KC549591 polyomavirus ,KC549588,JQ89829 1,KC549590,KC5495 87,KC549589,KC549 593,KC549594,KC54 9592,KC549586 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EU490515 papillomavirus type 10 pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — GQ227670 papillomavirus type 11 pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EF558839 papillomavirus type 3 pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EF591299 papillomavirus type 3b pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EF558841 papillomavirus type 4 pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EF558843 papillomavirus types pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EF558840 papillomavirus type 6 pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EF558838 papillomavirus type 7 pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EF558842 papillomavirus type 8 pillomavirus 12 Macaca fascicularis NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — EU490516 papillomavirus type 9 pillomavirus 12 Macaca fascicularis NC_019851 vertebrates 1 Polyomaviridae,Polyomavirus,Macaca — JX159986 polyomavirus 1 fascicularis polyomavirus 1 Macaca fuscata NC_003401 vertebrates 3 Herpesviridae,Rhadinovirus,Macacine — JN885137,AY528864, rhadinovirus herpesvirus 5 JN885136 Macacine herpesvirus 1 NC_004812 vertebrates 1 Herpesviridae,Simplexvirus,Macacine — AF533768 herpesvirus 1 Macacine herpesvirus 3 NC_006150 vertebrates 3 Herpesviridae,Cytomegalovirus,Macacine — DQ120516,JQ795930 herpesvirus 3 ,AY186194 Macacine herpesvirus 4 NC_006146 vertebrates 1 Herpesviridae,Lymphocryptovirus,Macacine — AY037858 herpesvirus 4 Macacine herpesvirus 5 NC_003401 vertebrates 1 Herpesviridae,Rhadinovirus,Macacine — AF083501 herpesvirus 5 Macaque simian foamy NC_010819 vertebrates 2 Retroviridae,Spumavirus,Macaque simian — X54482,JN801175 virus foamy virus Magpie-robin coronavirus NC_016993 vertebrates 1 Coronaviridae,Deltacoronavirus,Magpie-robin — JQ065046 HKU18 coronavirus HKU18 Mamastrovirus 10 NC_004579 vertebrates 1 Astroviridae,Mamastrovirus,Mamastrovirus 10 — AY179509 Mamastrovirus 13 NC_002469 vertebrates 1 Astroviridae,Mamastrovirus,Mamastrovirus 13 — Y15937 Mammalian Orthoreovirus NC_004274 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412757 strain orthoreovirus L3 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004275 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412756 strain orthoreovirus L2 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004276 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412764 strain orthoreovirus S4 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004277 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412761 strain orthoreovirus Si T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004278 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412759 strain orthoreovirus M2 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004279 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412762 strain orthoreovirus S2 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004280 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412758 strain orthoreovirus M1 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004281 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412760 strain orthoreovirus M3 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004282 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412755 strain orthoreovirus L1 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_004283 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412763 strain orthoreovirus S3 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_013228 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412759 strain orthoreovirus M2 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_013230 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412760 strain orthoreovirus M3 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_013232 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412762 strain orthoreovirus S2 T3/Bat/Germany/342/08 Mammalian Orthoreovirus NC_013234 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JQ412764 strain orthoreovirus S4 T3/Bat/Germany/342/08 Mammalian orthoreovirus NC_004274 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. EF029088,JN799428 orthoreovirus L3 Mammalian orthoreovirus NC_004275 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. DQ885990,HQ64277 orthoreovirus L2 0,JN799427 Mammalian orthoreovirus NC_004276 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. DQ396806,JN799422 orthoreovirus S4 Mammalian orthoreovirus NC_004277 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. DQ911244,HQ64277 orthoreovirus Si 5,JN799419 Mammalian orthoreovirus NC_004278 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. JN799424,HQ642772 orthoreovirus M2, DQ482462 Mammalian orthoreovirus NC_004279 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. JN799420,DQ396805 orthoreovirus S2 ,HQ642776 Mammalian orthoreovirus NC_004280 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. HQ642773,JN799423 orthoreovirus M1, DQ396804 Mammalian orthoreovirus NC_004281 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. JN799425,DQ403254 orthoreovirus M3 Mammalian orthoreovirus NC_004282 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. JN799426,HQ642771 orthoreovirus L1 ,DQ997719 Mammalian orthoreovirus NC_004283 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. JN799421,HQ642777 orthoreovirus S3 ,DQ411553 Mammalian orthoreovirus NC_013228 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. JN799424,HQ642772 orthoreovirus M2 ,DQ482462 Mammalian orthoreovirus NC_013230 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. JN799425,DQ403254 orthoreovirus M3 Mammalian orthoreovirus NC_013232 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. JN799420,DQ396805 orthoreovirus S2 ,HQ642776 Mammalian orthoreovirus NC_013234 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. DQ396806,JN799422 orthoreovirus S4 Mammalian orthoreovirus 1 NC_004274 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF129820 orthoreovirus L3 Mammalian orthoreovirus 1 NC_004275 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF378004 orthoreovirus L2 Mammalian orthoreovirus 1 NC_004276 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. X61586,M13139 orthoreovirus S4 Mammalian orthoreovirus 1 NC_004277 vertebrates 8 Reoviridae,Orthoreovirus,Mammalian seg. AY862136,EF494445, orthoreovirus S1 M10260,AY862135,M 35963,M14779,AY86 2133,AY862134 Mammalian orthoreovirus 1 NC_004278 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. M19345,M19407 orthoreovirus M2 Mammalian orthoreovirus 1 NC_004279 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. M17598,L19774 orthoreovirus S2 Mammalian orthoreovirus 1 NC_004280 vertebrates 4 Reoviridae,Orthoreovirus,Mammalian seg. AY428872,X59945,A orthoreovirus M1 Y428870,AY428871 Mammalian orthoreovirus 1 NC_004281 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF174382 orthoreovirus M3 Mammalian orthoreovirus 1 NC_004283 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. M14325,M18389 orthoreovirus S3 Mammalian orthoreovirus 1 NC_013228 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. M19345,M19407 orthoreovirus M2 Mammalian orthoreovirus 1 NC_013230 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF174382 orthoreovirus M3 Mammalian orthoreovirus 1 NC_013232 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. M17598,L19774 orthoreovirus S2 Mammalian orthoreovirus 1 NC_013234 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. X61586,M13139 orthoreovirus S4 Mammalian orthoreovirus 2 NC_004274 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. AF129821,GU196308 orthoreovirus L3 ,DQ664186 Mammalian orthoreovirus 2 NC_004275 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. DQ664185,GU19630 orthoreovirus L2 7,AF378006 Mammalian orthoreovirus 2 NC_004276 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. DQ318037,GU19631 orthoreovirus S4 3 Mammalian orthoreovirus 2 NC_004277 vertebrates 10 Reoviridae,Orthoreovirus,Mammalian seg. EU049605,AY862137 orthoreovirus S1 ,EU049607,EU04960 4,EU049603,M35964, GU196315,AY862138 ,EU049606,DQ31230 1 Mammalian orthoreovirus 2 NC_004278 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. DQ664188,GU19631 orthoreovirus M2 0 Mammalian orthoreovirus 2 NC_004279 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. GU196311,DQ66419 orthoreovirus S2 0 Mammalian orthoreovirus 2 NC_004280 vertebrates 4 Reoviridae,Orthoreovirus,Mammalian seg. AY428873,DQ664187 orthoreovirus M1 ,GU196309,AY42887 4 Mammalian orthoreovirus 2 NC_004281 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. GU196314,DQ66418 orthoreovirus M3 9,AF174383 Mammalian orthoreovirus 2 NC_004282 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. DQ664184,GU19630 orthoreovirus L1 6 Mammalian orthoreovirus 2 NC_004283 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. GU196312,M18390,D orthoreovirus S3 0664191 Mammalian orthoreovirus 2 NC_013228 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. DQ664188,GU19631 orthoreovirus M2 0 Mammalian orthoreovirus 2 NC_013230 vertebrates 3 Reoviridae,Orthoreovirus,Mammalian seg. GU196314,DQ66418 orthoreovirus M3 9,AF174383 Mammalian orthoreovirus 2 NC_013232 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. GU196311,DQ66419 orthoreovirus S2 0 Mammalian orthoreovirus 2 NC_013234 vertebrates 2 Reoviridae,Orthoreovirus,Mammalian seg. DQ318037,GU19631 orthoreovirus S4 3 Mammalian orthoreovirus 2 NC_004276 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. X60066 D5/Jones orthoreovirus S4 Mammalian orthoreovirus 2 NC_013234 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. X60066 D5/Jones orthoreovirus S4 Mammalian orthoreovirus 3 NC_004274 vertebrates 8 Reoviridae,Orthoreovirus,Mammalian seg. GU991661,JX486059 orthoreovirus L3 ,JQ599141,EF494437 ,M23747,AF129822,G U991671,GU589579 Mammalian orthoreovirus 3 NC_004275 vertebrates 11 Reoviridae,Orthoreovirus,Mammalian seg. JQ599139,AF378008, orthoreovirus L2 GU991660,AF378007 ,JX486058,EF494436 ,GU991670,AF37801 0,AF378009,GU5895 78,JQ3488 Mammalian orthoreovirus 3 NC_004276 vertebrates 12 Reoviridae,Orthoreovirus,Mammalian seg. GU991678,K02739,D orthoreovirus S4 0004471,DQ004472, DQ004473,GU58958 6,JX486066,DQ0044 70,DQ004474,EF494 444,DQ004475,GU99 1668 Mammalian orthoreovirus 3 NC_004277 vertebrates 24 Reoviridae,Orthoreovirus,Mammalian seg. JQ979280,JQ979277, orthoreovirus S1 GU991675,JQ599138 ,JQ979273,GU99166 5,AY302467,JQ97927 2,JQ979275,JQ97928 4,EF494441,JQ97928 2,GU589583,JQ9792 74,JX486063,JQ9792 71,JQ979281,XQ1161 ,JQ979283,JQ979278 ,JQ979285,M10262,J 0979279,JQ979276 Mammalian orthoreovirus 3 NC_004278 vertebrates 8 Reoviridae,Orthoreovirus,Mammalian seg. GU991663,GU58958 orthoreovirus M2 1,M20161,EF494439, GU991673,JX486061 M19408,U24260 Mammalian orthoreovirus 3 NC_004279 vertebrates 8 Reoviridae,Orthoreovirus,Mammalian seg. GU589584,JX486064 orthoreovirus S2 ,GU991666,L19776,G U991676,EF494442,J 02327,M25780 Mammalian orthoreovirus 3 NC_004280 vertebrates 13 Reoviridae,Orthoreovirus,Mammalian seg. GU991672,GU58958 orthoreovirus M1 0,GU991662,AY4288 78,M27261,AY42887 5,AY551083,EF49443 8,AY428876,AF46168 3,AY428877,JX48606 0,AF461684 Mammalian orthoreovirus 3 NC_004281 vertebrates 7 Reoviridae,Orthoreovirus,Mammalian seg. GU991664,AF174384 orthoreovirus M3 ,JX486062,EF494440 ,M27262,GU589582, GU991674 Mammalian orthoreovirus 3 NC_004282 vertebrates 7 Reoviridae,Orthoreovirus,Mammalian seg. M31058,GU991669,J orthoreovirus L1 0599140,GU589577, EF494435,JX486057, GU991659 Mammalian orthoreovirus 3 NC_004283 vertebrates 6 Reoviridae,Orthoreovirus,Mammalian seg. JX486065,XQ1627,G orthoreovirus S3 U991667,GU991677, GU589585,EF494443 Mammalian orthoreovirus 3 NC_013225 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. GQ468266 orthoreovirus L1 Mammalian orthoreovirus 3 NC_013226 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. GQ468267 orthoreovirus L2 Mammalian orthoreovirus 3 NC_013227 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. GQ468268 orthoreovirus M1 Mammalian orthoreovirus 3 NC_013228 vertebrates 8 Reoviridae,Orthoreovirus,Mammalian seg. GU991663,GU58958 orthoreovirus M2 1,M20161,EF494439, GU991673,GQ46826 9,JX486061,U24260 Mammalian orthoreovirus 3 NC_013229 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. GQ468270 orthoreovirus L3 Mammalian orthoreovirus 3 NC_013230 vertebrates 7 Reoviridae,Orthoreovirus,Mammalian seg. GU991664,AF174384 orthoreovirus M3 ,JX486062,EF494440 ,GU589582,GU99167 4,GQ468271 Mammalian orthoreovirus 3 NC_013231 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. GQ468272 orthoreovirus Si Mammalian orthoreovirus 3 NC_013232 vertebrates 8 Reoviridae,Orthoreovirus,Mammalian seg. GU589584,JX486064 orthoreovirus S2 ,GU991666,L19776,G U991676,EF494442, GQ468273,JQ2327 Mammalian orthoreovirus 3 NC_013233 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. GQ468274 orthoreovirus S3 Mammalian orthoreovirus 3 NC_013234 vertebrates 12 Reoviridae,Orthoreovirus,Mammalian seg. GU991678,DQ00447 orthoreovirus S4 1,DQ004472,DQ0044 73,GU589586,JX486 066,GQ468275,DQ00 4470,DQ004474,EF4 94444,DQ004475,GU 991668 Mammalian orthoreovirus 3 NC_004274 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159615 Dearing orthoreovirus L3 Mammalian orthoreovirus 3 NC_004275 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159614 Dearing orthoreovirus L2 Mammalian orthoreovirus 3 NC_004276 vertebrates 4 Reoviridae,Orthoreovirus,Mammalian seg. AF332135,HM159622 Dearing orthoreovirus S4 ,AF332136,AF332137 Mammalian orthoreovirus 3 NC_004277 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159619 Dearing orthoreovirus 51 Mammalian orthoreovirus 3 NC_004278 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159617 Dearing orthoreovirus M2 Mammalian orthoreovirus 3 NC_004279 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159620 Dearing orthoreovirus S2 Mammalian orthoreovirus 3 NC_004280 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159616 Dearing orthoreovirus M1 Mammalian orthoreovirus 3 NC_004281 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159618 Dearing orthoreovirus M3 Mammalian orthoreovirus 3 NC_004282 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159613 Dearing orthoreovirus L1 Mammalian orthoreovirus 3 NC_004283 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159621 Dearing orthoreovirus S3 Mammalian orthoreovirus 3 NC_013228 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159617 Dearing orthoreovirus M2 Mammalian orthoreovirus 3 NC_013230 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159618 Dearing orthoreovirus M3 Mammalian orthoreovirus 3 NC_013232 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. HM159620 Dearing orthoreovirus S2 Mammalian orthoreovirus 3 NC_013234 vertebrates 4 Reoviridae,Orthoreovirus,Mammalian seg. AF332135,HM159622 Dearing orthoreovirus S4 ,AF332136,AF332137 Mammalian orthoreovirus 4 NC_004276 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF368037 Ndelle orthoreovirus S4 Mammalian orthoreovirus 4 NC_004277 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF368035 Ndelle orthoreovirus S1 Mammalian orthoreovirus 4 NC_004278 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF368034 Ndelle orthoreovirus M2 Mammalian orthoreovirus 4 NC_004279 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF368036 Ndelle orthoreovirus S2 Mammalian orthoreovirus 4 NC_004282 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF368033 Ndelle orthoreovirus L1 Mammalian orthoreovirus 4 NC_013228 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF368034 Ndelle orthoreovirus M2 Mammalian orthoreovirus 4 NC_013232 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF368036 Ndelle orthoreovirus S2 Mammalian orthoreovirus 4 NC_013234 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. AF368037 Ndelle orthoreovirus S4 Marine birnavirus NC_008019 vertebrates 5 Birnaviridae,Aquabirnavirus,Marine birnavirus seg. A AY283785,AY064396 ,AY283781,AY28378 2,AY283784 Marine birnavirus NC_008026 vertebrates 3 Birnaviridae,Aquabirnavirus,Marine birnavirus seg. B AY123970,AY129665 ,AY129666 Marine birnavirus-H1 NC_008019 vertebrates 1 Birnaviridae,Aquabirnavirus,Marine birnavirus seg. A AY283783 Mason-Pfizer monkey virus NC_001550 vertebrates 2 Retroviridae,Betaretrovirus,Mason-Pfizer — AF033815,M12349 monkey virus Mastomys coucha NC_008519 vertebrates 1 Papillomaviridae,Pipapillomavirus,Pipapilloma — DQ664501 papillomavirus 2 virus 1 Mastomys natalensis NC_001605 vertebrates 1 Papillomaviridae,lotapapillomavirus,lotapapillo — U01834 papillomavirus mavirus 1 Melaka orthoreovirus NC_020439 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. F342660 orthoreovirus L1 Melaka orthoreovirus NC_020440 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. F342662 orthoreovirus L3 Melaka orthoreovirus NC_020441 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. F342663 orthoreovirus M1 Melaka orthoreovirus NC_020442 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. F342664 orthoreovirus M2 Melaka orthoreovirus NC_020443 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. F342665 orthoreovirus M3 Melaka orthoreovirus NC_020444 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. EF026044 orthoreovirus S2 Melaka orthoreovirus NC_020445 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. EF026045 orthoreovirus S3 Melaka orthoreovirus NC_020446 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. EF026046 orthoreovirus S4 Melaka orthoreovirus NC_020447 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. F342661 orthoreovirus L2 Melaka orthoreovirus NC_020448 vertebrates 1 Reoviridae,Orthoreovirus,Melaka seg. EF026043 orthoreovirus S1 Meleagrid herpesvirus 1 NC_002641 vertebrates 2 Herpesviridae,Mardivirus,Meleagrid — AF282130,AF291866 herpesvirus 1 Mengo virus NC_001479 vertebrates 2 Picornaviridae,Cardiovirus,Encephalomyocard — L22089, DQ294633 itis virus Mesocricetus auratus NC_022647 vertebrates 1 Papillomaviridae,Mesocricetus auratus — HG530538 papillomavirus 1 papillomavirus 1 Middle East respiratory NC_019843 vertebrates 30 Coronaviridae,Betacoronavirus,Middle East — KF600645,KF192507, syndrome coronavirus respiratory syndrome coronavirus KJ156944,KJ156952, KJ156869,KF600630, KF600652,KF600634, KJ156934,KF600620, KF600651,KF600644, KF600612,KF600627, KF600628,KF961221, KF961222,KF600613, KF186565,KF745068, KF186564,KF186566, KF600647,KF186567, KJ156910,KJ156874, KF600632,KJ156881, KJ156866,KJ156949 Miniopterus bat coronavirus NC_010438 vertebrates 1 Coronaviridae,Alphacoronavirus,Miniopterus — EU420139 HKU8 bat coronavirus HKU8 Miniopterus polyomavirus NC_020069 vertebrates 1 Polyomaviridae,Polyomavirus,Miniopterus — JX520661 polyomavirus Mink astrovirus NC_004579 vertebrates 1 Astroviridae,Mamastrovirus,Mamastrovirus 10 — GU985458 Mink calicivirus NC_019712 vertebrates 1 Caliciviridae,Vesivirus,Mink calicivirus — JX847605 Minute virus of mice NC_001510 vertebrates 3 Parvoviridae,Parvovirus,Minute virus of mice — M12032,JQ2275,DQ1 96317 Molluscum contagiosum NC_001731 vertebrates 1 Poxviridae,Molluscipoxvirus,Molluscum — U60315 virus subtype 1 contagiosum virus Moloney murine leukemia NC_001702 vertebrates 2 Retroviridae,Gammaretrovirus,Murine — AF462057,CS272315 virus ,NC_00181 leukemia virus 9,NC_0013 62,NC_001 501 Moloney murine sarcoma NC_001502 vertebrates 4 Retroviridae,Gammaretrovirus,Moloney — JQ2266,V01185,V011 virus murine sarcoma virus 84,AF033813 Monkey B-lymphotropic NC_004763 vertebrates 1 Polyomaviridae,Polyomavirus,African green — M30540 papovavirus monkey polyomavirus Monkeypox virus NC_003310 vertebrates 36 Poxviridae,Orthopoxvirus,Monkeypox virus — JX878427,AY741551, JX878415,JX878410, JX878416,JX878422, DQ011156,JX878419 ,HQ857562,JX87840 7,JX878414,DQ0111 54,JX878408,JX8784 28,AY753185,DQ011 155,JX878409,JX878 420,JX878426,JX878 417,JX878429,HM17 2544,JX878412,JX87 8423,DQ011157,JX8 78425,DQ011153,JX 878421,KC257459,JX 878424,KC257460,A Y603973, HQ857563, JX878411,JX878413, JX878418 Monkeypox virus Zaire-96- NC_003310 vertebrates 1 Poxviridae,Orthopoxvirus,Monkeypox virus — AF380138 1-16 Morelia spilota NC_016013 vertebrates 1 Papillomaviridae,Morelia spilota — HQ262535 papillomavirus 1 papillomavirus 1 Mouse astrovirus M- NC_015935 vertebrates 1 Astroviridae,Mouse astrovirus M- — JF755422 52/USA/2008 52/USA/2008 Mouse kobuvirus M- NC_015936 vertebrates 1 Picornaviridae,Kobuvirus,Mouse kobuvirus M- — JF755427 5/USA/2010 5/USA/2010 Mouse mammary tumor NC_001503 vertebrates 3 Retroviridae,Betaretrovirus,Mouse mammary — AF033807,M15122,D virus tumor virus 16249 Mouse parvovirus 1 NC_001630 vertebrates 1 Parvoviridae,Parvovirus,Mouse parvovirus 1 — U12469 Mouse parvovirus le NC_001630 vertebrates 1 Parvoviridae,Parvovirus,Mouse parvovirus 1 — DQ898166 Mouse parvovirus 2 NC_008186 vertebrates 1 Parvoviridae,Parvovirus,Mouse parvovirus 2 — DQ196319 Mouse parvovirus 3 NC_008185 vertebrates 1 Parvoviridae,Parvovirus,Mouse parvovirus 3 — DQ196318 Mouse parvovirus 4a NC_011619 vertebrates 1 Parvoviridae,Parvovirus,Mouse parvovirus 4 — FJ440683 Mouse parvovirus 4b NC_011619 vertebrates 1 Parvoviridae,Parvovirus,Mouse parvovirus 4 — FJ445512 Mouse parvovirus 5a NC_011618 vertebrates 1 Parvoviridae,Parvovirus,Mouse parvovirus 5a — FJ441297 Mouse polyomavirus (strain NC_001515 vertebrates 1 Polyomaviridae,Polyomavirus,Murine — K02737 Crawford small-plaque) polyomavirus Mulard duck circovirus NC_005053 vertebrates 2 Circoviridae,Circovirus,Duck circovirus — HQ180266,AY228555 ,NC_00722 0,NC_0065 61 Munia coronavirus HKU13- NC_011550 vertebrates 1 Coronaviridae, Deltacoronavi rus, Munia — FJ376622 3514 coronavirus HKU13 Murid herpesvirus 1 NC_004065 vertebrates 8 Herpesviridae,Muromegalovirus,Murid — GU305914,U68299,H herpesvirus 1 E610452,HE610456, HE610455,HE610454 ,HE610451,HE61045 3 Murid herpesvirus 2 NC_002512 vertebrates 1 Herpesviridae,Muromegalovirus,Murid — AF232689 herpesvirus 2 Murid herpesvirus 4 NC_001826 vertebrates 2 Herpesviridae,Rhadinovirus,Murid herpesvirus — U97553,AF105037 4 Murid herpesvirus 8 NC_019559 vertebrates 1 Herpesviridae,Muromegalovirus,Murid — JX867617 herpesvirus 8 Murine adenovirus 2 NC_014899 vertebrates 1 Adenoviridae,Mastadenovirus,Murine — HM049560 adenovirus B Murine adenovirus 3 NC_012584 vertebrates 1 Adenoviridae,Mastadenovirus,Murine — EU835513 adenovirus C Murine adenovirus A NC_000942 vertebrates 1 Adenoviridae,Mastadenovirus,Murine — M22245 adenovirus A Murine astrovirus NC_018702 vertebrates 2 Astroviridae,Murine astrovirus — JX544744,JX544743 Murine coronavirus NC_012936 vertebrates 6 Coronaviridae, Betacoronavirus, Murine — JX169866,KF268338, NC_00184 coronavirus KF268337,KF268339, 6 KF268336,JX169867 Murine coronavirus MHV-1 NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647223 ,NC_00184 coronavirus 6 Murine coronavirus MHV-3 NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647224 ,NC_00184 coronavirus 6 Murine coronavirus MHV- NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647226 JHM,IA ,NC_00184 coronavirus 6 Murine coronavirus NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647218 RA59/R13 ,NC_00184 coronavirus 6 Murine coronavirus NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647220 RA59/SJHM ,NC_00184 coronavirus 6 Murine coronavirus NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647219 RJHM/A ,NC_00184 coronavirus 6 Murine coronavirus NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647222 SA59/RJHM ,NC_00184 coronavirus 6 Murine coronavirus inf- NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647225 MHV-A59 ,NC_00184 coronavirus 6 Murine coronavirus NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647221 repA59/RJHM ,NC_00184 coronavirus 6 Murine coronavirus NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ647227 repJHM/RA59 ,NC_00184 coronavirus 6 Murine cytomegalovirus NC_004065 vertebrates 1 Herpesviridae,Muromegalovirus,Murid — AM886412 (strain K181) herpesvirus 1 Murine hepatitis virus NC_012936 vertebrates 5 Coronaviridae,Betacoronavirus,Murine — AY700211,AF208067, ,NC_00184 coronavirus AB551247,AF208066, 6 GU593319 Murine hepatitis virus strain NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — AF201929 2 NC_00184 coronavirus 6 Murine hepatitis virus strain NC_012936 vertebrates 2 Coronaviridae,Betacoronavirus,Murine — FJ884686,FJ884687 A59 coronavirus Murine hepatitis virus strain NC_00184 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — AF207902 ML-11 NC_012936 coronavirus NC_00184 6 Murine hepatitis virus strain NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — JQ173883 S/3239-17 ,NC_00184 coronavirus 6 Murine leukemia virus NC_001702 vertebrates 12 Retroviridae,Gammaretrovirus,Murine — AB187566,Y13893,M ,NC_00181 leukemia virus 87550,DQ366149,AY 9,NC_0013 252102,AF019230,AB 62,NC_001 187565,AY818896,AF 501 169256,K03363,U137 66,JQ2255 Murine leukemia virus NC_001702 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — HQ246218 N417 ,NC_001811 eukemia virus 9,NC_0013 62,NC_001 501 Murine norovirus NC_008311 vertebrates 8 Caliciviridae,Norovirus,Murine norovirus — EF531291,AB435514, AB435515,JXQ48594, DQ911368,EF531290 ,HQ317203,AB60176 9 Murine norovirus 1 NC_008311 vertebrates 13 Caliciviridae,Norovirus,Murine norovirus — EU004660,EU004654 ,EF014462,EU00466 2,EU004661,EU0046 59,AY228235,EU004 656,EU004657,DQ28 5629,EU004655,EU0 04658,KC782764 Murine norovirus 2 NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — DQ223041 Murine norovirus 3 NC_008311 vertebrates 4 Caliciviridae,Norovirus,Murine norovirus — KC792553,DQ223042 ,FJ446720,JQ658375 Murine norovirus 4 NC_008311 vertebrates 2 Caliciviridae,Norovirus,Murine norovirus — DQ223043,FJ446719 Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004672 GV/C R1/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004678 GV/CR10/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004679 GV/CR11/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004680 GV/CR13/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004681 GV/CR15/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004682 GV/CR17/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004683 GV/CR18/2005/DEU Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004673 GV/CR3/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004674 GV/CR4/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004675 GV/CRS/2005/USA Murine norovirus NC_008311 vertebrates 2 Caliciviridae,Norovirus,Murine norovirus — EU004676,JQ237823 GV/CR6/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004677 GV/CR7/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320644 2409/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320645 2410/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320646 2411/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320647 2747/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320648 2750/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320649 4421/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320650 4428/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320651 4431/2005/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320652 A114/2006/USA Murine norovirus GV/NIH- NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — JF320653 D220/2007/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004663 GV/W U11/2005/U SA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004664 GV/WU12/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004665 GV/WU20/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004666 GV/WU21/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004667 GV/WU22/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004668 GV/WU23/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004669 GV/WU24/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004670 GV/WU25/2005/USA Murine norovirus NC_008311 vertebrates 1 Caliciviridae,Norovirus,Murine norovirus — EU004671 GV/WU26/2005/USA Murine osteosarcoma virus NC_001506 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — AF033814 osteosarcoma virus Murine pneumotropic virus NC_001505 vertebrates 2 Polyomaviridae,Polyomavirus,Murine — M55904, EF186666 pneumotropic virus Murine polyomavirus NC_001515 vertebrates 3 Polyomaviridae,Polyomavirus,Murine — U27812,U27813,JQ22 polyomavirus 88 Murine polyomavirus strain NC_001515 vertebrates 1 Polyomaviridae,Polyomavirus,Murine — JQ2289 A3 polyomavirus Murine polyomavirus strain NC_001515 vertebrates 1 Polyomaviridae,Polyomavirus,Murine — AF442959 BG polyomavirus Murine type C retrovirus NC_001702 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — X94150 ,NC_00181 leukemia virus 9,NC_0013 62,NC_001 501 Muromegalovirus C4A NC_004065 vertebrates 1 Herpesviridae,Muromegalovirus,Murid — EU579861 herpesvirus 1 Muromegalovirus G4 NC_004065 vertebrates 1 Herpesviridae,Muromegalovirus,Murid — EU579859 herpesvirus 1 Muromegalovirus WP15B NC_004065 vertebrates 1 Herpesviridae,Muromegalovirus,Murid — EU579860 herpesvirus 1 Mus dunniendogenous NC_001702 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — AF053745 virus ,NC_00181 leukemia virus 9,NC_0013 62,NC_001 501 Muscovy duck circovirus NC_005053 vertebrates 17 Circoviridae,Circovirus,Duck circovirus — GQ423743,GQ86875 ,NC_00722 7,GQ423746,HQ1802 0,NC_0065 65,GU 168779,EF370 61 476,DQ166836,DQ16 6838,GQ423742,DQ1 66837,GQ423744,GQ 334371,FJ554673,G 0423741,EF451157,J X499186,GQ423745 Muscovy duck parvovirus NC_006147 vertebrates 3 Parvoviridae,Dependovirus,Duck parvovirus — KC171936,X75093,U 22967 Muscovy duck reovirus NC_015126 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC508647,KF306082 L1 ,JX478260 Muscovy duck reovirus NC_015127 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC508648,JX478261, L2 KF306083 Muscovy duck reovirus NC_015128 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC508649,JX478262, L3 KF306084 Muscovy duck reovirus NC_015129 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC508650,KF306085 M1 ,JX478263 Muscovy duck reovirus NC_015130 vertebrates 4 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF306086,KC756359 M2 ,KC508651,JX478264 Muscovy duck reovirus NC_015131 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC508652,JX478265, M3 KF306087 Muscovy duck reovirus NC_015132 vertebrates 4 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. DQ198854,KC508653 S1 ,KF306088,DQ19136 3 Muscovy duck reovirus NC_015133 vertebrates 4 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. DQ198857,KC508654 S2 ,KF306089,JX478267 Muscovy duck reovirus NC_015134 vertebrates 3 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KC508655,JX478268, S3 KF306090 Muscovy duck reovirus NC_015135 vertebrates 2 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. KF306091,JX478269 S4 Muscovy duck reovirus NC_015131 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. AJ293969 89330 M3 Muscovy duck reovirus S14 NC_015130 vertebrates 1 Reoviridae,Orthoreovirus,Avian orthoreovirus seg. DQ989557 M2 Myotis polyomavirus VM- NC_011310 vertebrates 1 Polyomaviridae,Polyomavirus,Bat — FJ188392 2008 polyomavirus Myxoma virus NC_001132 vertebrates 34 Poxviridae,Leporipoxvirus,Myxoma virus — JX565567,EU552530, JX565566,JX565573, KC660080,KC660082 ,JX565565,JX565574, JX565568,JX565580, JX565564,JX565569, KC660083,KC660079 ,KC660084,AF17072 6,KC660081,JX56557 1,JX565570,JX56557 2,KF148065,JX56558 2,JX565579,GQ4099 69,JX565575,JX5655 78,JX565563,KC6600 85,JX565584,JX5655 77,JX565583,JX5655 62,JX565581,JX5655 76 Night-heron coronavirus NC_016994 vertebrates 1 Coronaviridae, Deltacoronavi rus, Night-heron — JQ065047 HKU19 coronavirus H KU19 Nile crocodilepox virus NC_008030 vertebrates 1 Poxviridae,Crocodylidpoxvirus,Nile — DQ356948 crocodilepox virus Old World harvest mouse NC_008582 vertebrates 1 Papillomaviridae,Pipapillomavirus,Pipapilloma — DQ269468 papillomavirus ,NC_01432 virus 2 6 Orange-spotted grouper NC_003494 vertebrates 1 Incloviridae,Megalocytivirus,Infectious spleen — AY894343 iridovirus and kidney necrosis virus Orangutan polyomavirus NC_013439 vertebrates 2 Polyomaviridae,Polyomavirus,Orangutan — FN356900,FN356901 polyomavirus Orf virus NC_005336 vertebrates 4 Poxviridae,Parapoxvirus,Orf virus — DQ184476,AY386263 ,HM133903,AY38626 4 Otomops polyomavirus 1 NC_020071 vertebrates 1 Polyomaviridae,Polyomavirus,Otomops — JX520664 polyomavirus 1 Otomops polyomavirus 2 NC_020066 vertebrates 1 Polyomaviridae,Polyomavirus,Otomops — JX520658 polyomavirus 2 Ovine adenovirus A NC_002513 vertebrates 1 Adenoviridae,Mastadenovirus,Ovine — AF252854 adenovirus A Ovine adenovirus D NC_004037 vertebrates 1 Adenoviridae,Atadenovirus,Ovine adenovirus — U40839 D Ovine enterovirus NC_004441 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus G — JQ277724 Ovine enzootic nasal tumor NC_007015 vertebrates 6 Retroviridae,Betaretrovirus,Ovine enzootic — GU292317,GU29231 virus nasal tumor virus 5,KC189895,GU2923 14,GU292318,GU292 316 Ovine enzootic nasal NC_007015 vertebrates 1 Retroviridae,Betaretrovirus,Ovine enzootic — Y16627 tumour virus nasal tumor virus Ovine herpesvirus 2 NC_007646 vertebrates 2 Herpesviridae,Macavirus,Ovine herpesvirus 2 — AY839756,DQ198083 Ovine lentivirus NC_001511 vertebrates 3 Retroviridae,Lentivirus,Ovine lentivirus — AF479638,M31646,M 34193 Ovine papillomavirus-1 NC_001789 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Deltapap — U83594 illomavirus 3 Ovine papillomavirus type 2 NC_001789 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Deltapap — U83595 illomavirus 3 PRCV ISU-1 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus,Alphacoronav — DQ811787 irus 1 PRRSV HB-1(sh)/2002 NC_001961 vertebrates 1 Arteriviridae,Arterivirus,Porcine reproductive — AY150312 and respiratory syndrome virus PRRSV HB-2(sh)/2002 NC_001961 vertebrates 1 Arteriviridae,Arterivirus,Porcine reproductive — AY262352 and respiratory syndrome virus PRRSV HN1 NC_001961 vertebrates 1 Arteriviridae,Arterivirus,Porcine reproductive — AY457635 and respiratory syndrome virus PRRSV LV4,2,1 NC_001961 vertebrates 1 Arteriviridae,Arterivirus,Porcine reproductive — AY588319 and respiratory syndrome virus Pan troglodytes NC_019858 vertebrates 1 Polyomaviridae,Polyomavirus,Pan troglodytes — JX159983 schweinfurthi schweinfurthii polyomavirus 2 i polyomavirus 2 Pan troglodytes verus NC_019855 vertebrates 1 Polyomaviridae,Polyomavirus,Pan troglodytes — JX159980 polyomavirus 3 verus polyomavirus 3 Pan troglodytes verus NC_019856 vertebrates 1 Polyomaviridae,Polyomavirus,Pan troglodytes — JX159981 polyomavirus 4 verus polyomavirus 4 Pan troglodytes verus NC_019857 vertebrates 1 Polyomaviridae,Polyomavirus,Pan troglodytes — JX159982 polyomavirus 5 verus polyomavirus 5 Panine herpesvirus 2 NC_003521 vertebrates 1 Herpesviridae,Cytomegalovirus,Panine — AF480884 herpesvirus 2 Panthera leo persica NC_004765 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Lamb — AY904724 papillomavirus type 1 dapapillomavirus 1 Papiine herpesvirus 2 NC_007653 vertebrates 1 Herpesviridae,Simplexvirus,Papiine — DQ149153 herpesvirus 2 Papio hamadryas NC_017716 vertebrates 1 Papillomaviridae,Papio hamadryas — JF304764 papillomavirus type 1 papillomavirus type 1 Paralichthys olivaceus NC_009923 vertebrates 1 Birnaviridae,Aquabirnavirus,Paralichthys seg. A EU161285 birnavirus olivaceus birnavirus Paralichthys olivaceus NC_009924 vertebrates 1 Birnaviridae,Aquabirnavirus,Paralichthys seg. B EU161286 birnavirus olivaceus birnavirus Parrot hepatitis B virus NC_016561 vertebrates 19 Hepadnaviridae,Avihepadnavirus,Parrot — JX274035,JX274023, hepatitis B virus JX274021,JX274029, JX274030,JX274019, JN565944,JX274032, JX274034,JX274033, JX274027,JX274026, JX274018,JX274024, JX274020,JX274022, JX274031,JX274028, JX274025 Parvo-like hybrid virus UC1 NC_022089 vertebrates 1 Parvoviridae, Parvovirus NIH-CQV — KF170373 Parvo-like hybrid virus NC_022089 vertebrates 1 Parvoviridae,Parvovirus NIH-COV — KF214638 UC11 Parvo-like hybrid virus UC4 NC_022089 vertebrates 1 Parvoviridae,Parvovirus NIH-COV — KF214645 Parvo-like hybrid virus UC9 NC_022089 vertebrates 1 Parvoviridae,Parvovirus NIH-COV — KF214640 Parvovirus NIH-COV NC_022089 vertebrates 1 Parvoviridae, Parvovirus NIH-COV — KC617868 Pegivirus A NC_001837 vertebrates 1 Flaviviridae,Pegivirus,Pegivirus A — U94421 Penaeus monodon NC_022897 vertebrates 1 Circoviridae,Circovirus,Penaeus monodon — KF481961 circovirus VN11 circovirus VN11 Penaeus monodon NC_011545 vertebrates 1 Parvoviridae,Parvovirus,Penaeus monodon — FJ410797 hepatopancreatic hepatopancreatic parvovirus parvovirus Perch rhabdovirus NC_020803 vertebrates 1 Rhabdoviridae,Perhabdovirus,Perch — JX679246 rhabdovirus Pestivirus Giraffe-1 NC_003678 vertebrates 1 Flaviviridae,Pestivirus,Pestivirus Giraffe-1 — AF144617 Pestivirus reindeer-1 V60- NC_003679 vertebrates 1 Flaviviridae,Pestivirus,Border disease virus — AF144618 Krefeld Pestivirus strain Aydin/04- NC_018713 vertebrates 1 Flaviviridae,Pestivirus,Pestivirus strain — JX428945 TR Aydin/04-TR Phocoena phocoena NC_018074 vertebrates 1 Papillomaviridae,Phocoena phocoena — GU117621 papillomavirus 1 papillomavirus 1 Phocoena phocoena NC_018075 vertebrates 1 Papillomaviridae,Phocoena phocoena — GU117622 papillomavirus 2 papillomavirus 2 Phocoena phocoena NC_018076 vertebrates 1 Papillomaviridae,Phocoena phocoena — GU117623 papillomavirus 4 papillomavirus 4 Phocoena spinipinnis NC_003348 vertebrates 1 Papillomaviridae,Omikronpapillomavirus,Omik — AJ238373 papillomavirus 1 ronpapillomavirus 1 Pigeon picornavirus B NC_015626 vertebrates 2 Picornaviridae, Pigeon picornavirus B — KC560801,FR727144 Piliocolobus rufomitratus NC_019850 vertebrates 1 Polyomaviridae,Polyomavirus,Piliocolobus — JX159984 polyomavirus 1 rufomitratus polyomavirus 1 Pipistrellus bat coronavirus NC_009020 vertebrates 1 Coronaviridae,Betacoronavirus,Pipistrellus bat — EF065509 HKU5 coronavirus HKU5 Polyomavirus HPyV6 NC_014406 vertebrates 6 Polyomaviridae,Polyomavirus,Polyomavirus — HM011559,HM01155 HPyV6 8,HM011560,HM0115 62,HM011561,HM011 563 Polyomavirus HPyV7 NC_014407 vertebrates 6 Polyomaviridae,Polyomavirus,Polyomavirus — HM011566,HM01156 HPyV7 8,HM011565,HM0115 69,HM011564,HM011 567 Porcine adenovirus C NC_002702 vertebrates 1 Adenoviridae, Mastadenovirus, Porcine — AF289262 adenovirus C Porcine astrovirus 3 NC_019494 vertebrates 1 Astroviridae,Mamastrovirus,Porcine astrovirus — JX556691 3 Porcine bocavirus 3 NC_016031 vertebrates 4 Parvoviridae,Bocavirus,Porcine bocavirus 3 — JF713715,JF429834, JF713714,KC473563 Porcine bocavirus 3C NC_016031 vertebrates 1 Parvoviridae,Bocavirus,Porcine bocavirus 3 — JN681175 Porcine bocavirus 4-1 NC_016032 vertebrates 1 Parvoviridae,Bocavirus,Porcine bocavirus 4 — JF429835 Porcine bocavirus 4-2 NC_016032 vertebrates 1 Parvoviridae,Bocavirus,Porcine bocavirus 4 — JF429836 Porcine bocavirus 5/JS677 NC_016647 vertebrates 1 Parvoviridae,Bocavirus,Porcine bocavirus — JN831651 5/JS677 Porcine circovirus NC_013774 vertebrates 2 Circoviridae,Circovirus,Porcine circovirus type — FJ790425,FJ655419 1/2a Porcine circovirus 1 NC_001792 vertebrates 51 Circoviridae,Circovirus,Porcine circovirus 1 — DQ472013,DQ47201 2,FJ475129,GU79957 5,AY099501,DQ4720 14,AF012107,KC924 758,FJ159689,JX566 507,EF533941,DQ47 2016,DQ659153,GU3 71908,DQ659154,AY 754012,DQ494787,J N398656,KC878437,J N133302,AY660574, KC527543,AY699796 ,DQ650650,FJ159693 ,KC733436,FJ159690 ,Y09921,AY184287,K C990120,AY193712, DQ472015,AY754013 ,AF071879,GU72233 4,FJ159692,EF49384 3,KC894933,KC4474 55,KF732857,AY2198 36,DQ358813,FJ1596 91,JN133303,DQ648 032,AY754015,GQ44 9671,U49186,AY7540 14,HM143844,DQ494 788 Porcine circovirus 2 NC_005148 vertebrates 1115 Circoviridae,Circovirus,Porcine circovirus 2 — JX912914,KC800642, FJ660970,EF524519, DQ910865,KC800640 ,JX948775,FJ870971, FJ948167,EU148504, EF452350,JX982222, FJ905468,EF524528, HQ831529,HM00010 0,EF524517,EF56534 7,AY484409,AY0994 96,EU450590,EF565 343,AY682996,HM00 9338,HQ738639,EF4 21969,DQ220736,JQ 390467,DQ861899,JF 690914,KF850458,G U370064,HQ148879, HM009337,DQ20164 0,AY256459,EF56535 9,KF850460,FJ87096 7,KF027494,JQ80946 3,FJ667585,AF26404 1,KF742549,KC8006 35,EU136718,FJ4263 98,EU274311,AY424 402,JX512853,KF850 466,AY682992,JQ181 586,DQ915586,FJ447 482,HQ202966,EU14 8507,FJ667589,EF67 5238,EU747085,JF69 0911,FN687850,EF42 1970,EF524542,AY59 6823,HM038025,AY3 21986,KC821781,AY 484413,EU521707,FJ 608542,FJ388889,GU 325770,KC688418,H 0395027,JF317567,H M776445,HQ395040, HM038027,HM77644 8,KF850464,KF74254 8,HM038029,FJ5944 71,JF827599,HQ2029 47,AY847748,AY035 820,AY510375,AB07 2301,KC823058,AY1 22275,AY325495,FJ6 60968,GU370063,JX 982227,FJ233905,DQ 195679,AF118095,H 0202952,HQ591372, EU727546,JN133304, FJ667588,HQ395030, FJ660971,GU083583, HM776446,KC75376 9,HQ395042,DQ8619 01,HQ395025,GU247 991,JX982221,EF675 240,EF565342,DQ86 1895,HQ831539,EF9 89713,KF732649,HQ 202964,EU547460,A Y556473,AY686765,F J608544,EU521709,H 0395046,EF675229, EU909686,EU450584 ,HQ831530,AF16652 8,HM161711,HQ5913 73,AY188355,AY641 542,GU450330,EF56 5349,EF675233,JF31 7572,JQ955679,FJ21 8002,EF565366,JX94 8779,FN687841,AF40 8635,HQ831535,HQ3 95031,FJ608547,DQ2 20739,JF290418,GUO 49340,GU325762,HM 003569,GQ449670,D 0201639,AF055391, EU503034,AY874168 ,EF524541,HM14289 6,JX512855,FJ66096 7,FJ712215,KC53381 2,FJ667582,EF39477 6,JQ181602,EU1367 19,DQ910866,HQ395 022,KC800638,EU54 5542,AY099500,EU5 47456,EF565365,EU 656143,KF871067,JF 317579,EU257516,K C823059,EU257515, EU780074,HQ395019 ,HQ831534,HQ39502 3,EF421972,GQ3590 05,KF742546,JN1192 55,FJ667592,KC8594 51,EF524520,JX5128 60,FJ905461,JF3175 65,JQ181594,JF6827 92,GU325766,JX512 859,FJ644930,GU450 328,HQ395054,HQ83 1522,FJ158602,AY32 1997,JX193799,KC80 0637,HQ378158,EF4 52352,HQ591370,DQ 629118,JX506730,G U325764,EU594440, HM038020,JX948773 ,HQ591367,KF37470 5,JX406420,HM6417 52,EU386606,HQ395 037,EU545550,HQ20 2955,DQ104419,HM7 76437,JX512857,EF5 65355,KF850468,AY4 84412,HQ831521,GU 083582,JF272497,HQ 395028,GQ358994,E F421973,AF364094,H M102350,EF592576, DQ220729,JX948784 ,FJ644558,HQ378159 ,EF394774,FN687857 ,HM003570,FR82345 1,EU136711,EF5653 63,FJ667586,KF8504 65,AY682990,HM038 028,EU148503,EF56 5350,EF452353,AF26 4038,EF524530,GQ3 58992,AY291318,AY 682995,EF565344,AY 943819,HQ113118,A Y536756,EF565364, DQ997816,JF690921, HQ395051,EU909688 ,EF524527,JX406425 ,FN687842,JQ181601 ,HQ202973,HM03801 9,KF695388,FN68785 5,EU391637,EU1367 14,EF524535,JN6398 57,HQ202961,FJ6445 61,JX945575,KC8217 84,EF565351,AB0723 03,HQ202950,AF154 679,AY291316,KF850 467,HM161710,JX94 8770,GQ358999,AY7 13470,KF027497,EF5 24515,JQ809462,AF2 01307,KF742553,GQ 404853,AF520783,AY 484416,JX948771,D 0180392,FJ716704,E F524540,HQ591381, GU808525,HQ59137 9,KF742547,HQ2029 44,FJ905460,JQ1816 05,JXQ99780,KC7537 71,EF210106,EU545 546,FN398025,EF458 306,EU136715,HQ20 2948,HQ395045,KC8 00643,AY321993,AF3 81177,AY686763,KC 823055,HQ113119,A F264040,AY849938, HQ395026,JQ181593 ,GQ358996,AY39172 9,AY916791,GU3257 67,EU594438,HQ591 366,FJ644562,JF690 923,AY424401,EF524 523,AF201309,FJ660 969,HM038018,KC47 3167,JXQ99781,FJ87 0973,EU503036,DQ3 63860,HQ591380,HQ 591376,EF565356,JX 982223,FN398027,H M776439,EU503031, HM038026,GQ35900 9,FJ667593,AY75402 1,KC153106,JX40641 9,HM776447,FJ9054 71,JF690915,JQ1815 87,EF421968,HM038 032,KF742542,HQ83 1519,HQ395041,HQ3 95043,FJ598044,DQ9 15583,FJQ41151,EU1 48505,KC821783,JF6 90920,DQ220738,HM 038024,JF317566,AY 682994,AF381176,KF 926650,JF317571,DQ 629119,HQ831531,JF 690922,JQ002671,E U503033,FJ667584,K C533811,FJ608538,H 0202957,FJ608539,E U450587,DQ870484, JF682794,JF272499, AY874166,JF317581, GQ359006,HQ39506 0,FJ644923,FJ60854 6,GU325753,JX9487 72,AY256458,EF5653 61,EU545548,GQ359 004,HQ378161,FJ158 603,HQ395039,HQ39 5048,JX948783,KF02 7493,EF565358,AY60 4430,AM086384,AY3 21988,FJ483938,KC7 88504,HM038022,GU 244507,FJ644926,EF 524531,DQ233257,J 0994268,DQ220732, EF493840,FJ644919, EU921257,JF317577, GU325765,DQ14132 2,DQ478947,AY1469 92,DQ629116,HM623 764,EF524516,KC83 5193,AY099499,EU3 40258,JQ181592,AY3 21999,GQ359007,KC 447454,EU921255,FJ 644931,HQ202953,E F565345,EU647557, HQ395038,JF928003, HM142895,HM14289 7,JF682791,HQ20295 8,JF690912,EU36632 4,DQ923524,KF8504 61,DQ220733,FJ9054 66,AY146991,EU503 037,FN687844,FJ644 928,EF675235,JXQ99 785,FJ712216,DQ206 444,FJ644920,EF565 362,HQ395032,AY53 6755,AB426905,HQ4 02903,AF085695,HQ 591368,FJ644925,HQ 831524,JF928006,JX 948780,AY256457,D 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534237,EF524532,G 0449672,GU938303, EF394779,DQ915588 ,EU257513,JF317585 ,AY484415,HQ39504 9,FJ644555,HQ20296 8,HM776443,JX9455 77,AY682993,AY556 474,AY217743,JF317 586,AY256455,GQ35 8995,JF317582,AY29 4310,AY613854,FN6 87846,JQ692110,FJ6 44924,KC860786,AJ2 23185,KC800645,HQ 395058,JQ413808,AF 201306,DQ629117,H 0831523,FJ870975,K C336418,JQ002672, AY321984,EU257514 ,EU340257,EF52453 7,FJ870968,EU52170 8,KC835194,EU2743 9,KC821782,FJ6445 57,JN615187,GQ359 010,KC800639,HM03 8033,KC684978,FN6 87843,FJ667587,JX9 48786,DQ180393,HQ 202956,HM038023,D 0104422,AB072302,J 0181591,FJ870976,A Y651850,EF524538, DQ915584,AY556477 ,FN687854,AY69167 9,DQ201642,EF5653 67,FJ644921,FJ4403 38,HQ202960,EF394 778,EU545545,EU30 2139,AY874167,DQ8 61900,AY099498,AF0 55393,KF742541,KC 788505,EU136713,H 0202962,FJ667583,A Y754022,AY732494, GU247989,KC907703 ,EF394775,HQ59137 4,FJ644932,EF56535 3,EU545543,JX29471 7,EU274312,AY1776 26,JQ181606,EU547 457,EF524533,GU93 8304,HQ395061,FJ87 0972,AY099497,EF67 5236,GU325763,HQ2 02959,EU148506,JF9 28005,EU302140,EU 418627,AY754018,EF 675244,HQ202946,H 0831540,EF421971,J N660055,AY678532, HQ591369,HM77645 3,AY181947,JQ18160 3,EU503035,FJ90546 7,DQ346683,AY2881 33,DQ104421,KF742 552,JF317570,JX948 777,EF493839,JX982 224,KC823054,JX982 219,JF718784,HQ395 057,GU001709,FJ667 596,AY321982,JX945 576,EF565357,EF524 534,HQ113120,HQ39 5034,HQ831525,FN6 87856,GQ174519,EF 524526,AY321991,H 0831536,JF317569,J N388690,JF317574,D 0355153,FJ667591,H M776438,GQ359002, HQ202970,JQ181590 ,AF201308,AY969004 ,HQ113117,HM77645 0,KF742540,HQ2029 67,EF493838,JX5352 97,JF317575,AF3811 75,JX534236,JX9487 82,EU503032,FJ2339 10,KC336417,EU450 588,AY874163,JXQ99 782,FJ667595,HQ738 641,EU136716,JF317 580,GU325769,AY48 4410,DQ861897,KC4 73168,AY321992,KC 835191,EF675230,FN 398026,AY874169,G 0358998,KC835190, JQ181589,JQ181599, GU247988,AY754016 ,EF592575,HQ20294 9,FJ644559,EF56535 4,FN687847,AF20189 7,EF493837,JX94878 5,FN687849,JX91291 5,AF201311,AY32199 4,EF524522,JX94878 1,AY181948,GU3257 61,AF055392,GU325 757,EF675243,JQ181 600,JXQ99786,FJ218 000,DQ201641,EU78 0073,HQ202969,EF6 75234,JF690916,KC2 49977,GQ359003,JX 948769,JF928002,G 0404852,JX519293,A Y099495,JN176181,K C835189,JQ181585, DQ997817,FJ667590, JX406421,EF675237, GUO17735,DQ62911 3,FJ644556,AY59682 2,FJ998185,HQ83153 2,HQ650833,AY4844 08,FJ608543,JX2043 86,FJ644922,DQ2207 31,FN687840,FJ6449 29,HM027580,KF742 550,GU124593,DQ22 0727,EU450586,KC6 18389,JF317588,FJ1 58604,AY181946,FJ6 08540,FN687851,GQ 449669,HQ831533,E U283329,KC800636, AF264042,GQ915288 ,EU594439,HQ39504 7,EF421967,JF31758 4,JQ809464,HQ8315 37,FJ870969,EU5554 39,JQ181596,EF6752 41,JF690917,FN6878 52,FJ644563,AY3219 89,KF742543,KF0274 96,GQ911590,HM776 451,HMO38021,HQ39 5050,AY579893,JF31 7583,EU921254,HM7 76444,HM776449,EF 524524,FJ608541,FJ 644560,GQ227412,H 0202951,HQ591377, KC788503,JQ181588 ,JF317587,KF742544 ,JF899334,HQ202971 ,JX982228,JX406423, GU247992,AY321996 ,GQ359011,HQ69309 2,GQ359000,AF0868 36,JX274295,EF5653 46,DQ220737,DQ629 115,JQ181595,DQ10 4420,HM142898,FJ1 58606,JX982220,HQ 202963,AF201310,K C188796,AJ293867,E F524518,AY578327, HQ395053,AJ293869 ,HQ395024,EU45058 9,AY322001,KC8006 41,DQ861898,HM142 894,KF742545,DQ86 1902,JF317573,HQ59 1371,JF317576,FJ60 8545,EU545551,GU3 25759,EF675231,FN6 87848,JQ994269,EU 095020,EU420015,JX 406422,DQ220728,H M027579,GU325760, HQ591375,EU346945 ,EU594437,AY32199 8,KC751546,EF4938 41,JXQ99783,JQ6534 49,DQ915585,AY686 762,EU589463,HQ39 5059,FJ905462,EU50 3039,GU247990,FJ23 3906,EF565348,EU4 50592,EU547459,HQ 713495,EU257511,A F454546,AF201305, GQ915289,HQ83152 8,GU938302,GQ3589 93,EF675232,KC753 772,FJ233909,AY321 983,EF565360,JX512 858,JXQ99784,EU126 887,KC823056,AY32 2004,EU408780,FJ90 5463,JX406426,EU68 4164,FJ233907,EU54 5547,AY691169,KC7 53768,DQ629114,AY 484414,KC733435,K F850463,HM142899, FJ233908,GQ358997 ,GU252369,KC47316 5,AF118097,AY18039 6,FJ623185,EU13671 2,AY424404,HQ3781 60,KC688419,EF524 536,KC527542,JX948 778,DQ220734,EU13 6720,KC823053,JX40 6424,AY288135,EF52 4521,JX948774,HQ3 95033,HQ202972,EU 450591,EF524539,EF 565368,DQ364650,D 0151643,DQ322701, FJ608549,GU325754, AY424403,FJ935780, KF027491,HM776442 ,JF317568,KC821785 ,KF850462,GU32575 5,FJ158605,EF61903 7,JX512856,JF69091 8,FJ870970,FN39802 4,EU545544,KC8006 34,HM142900,AY256 460,FJ905465,AY682 997,AF027217,FJ644 927,HM038034,AY32 1990,FJ905459,HQ73 8640,HM776441,AY6 86764,EU503040,JX5 12854,FN687853,EFS 24525,EU136717,EF 452351,GU247987,A F086835,JQ181607,E U909687,KC823057, AY321987,KF850459, HQ113121,JN119257 ,KF871068,HQ83153 8,DQ220735,AF0868 34,KC800644,AY754 020,FJ948168,DQ104 423,JF317578,AY556 476,HQ693093,FJ905 470,GU450327,EU92 1256,HQ591365,AY3 21995,KC473166,EU 257512,GQ996404,G Q359001,EU366326, FJ870974,HQ395055, GU244506,HM77644 0,EU886638,AF0553 94,JX535296,JN1192 56,GU450329,HM038 017,FJ716703,AF544 024,JF317589,FJ218 001,AY181945,AY42 4405,JF690913,EF49 3842,GU325768,GUO 49342,FJ804417,HQ3 95044,HM009336 Porcine circovirus 2 NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — EU057185 P0404c/03 Porcine circovirus 2 NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — EU057189 R0255/209/03 Porcine circovirus 2 NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — EU057188 S0255/210/03 Porcine circovirus 2 NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — EU057186 T0181c/03 Porcine circovirus 2 NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — EU057187 U0168/03 Porcine circovirus 2 NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — EU057184 Z0161 b/03 Porcine circovirus 2 strain NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — DQ218419 SD3 Porcine circovirus 2 strain NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — DQ218420 SDS Porcine circovirus 2 strain NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — DQ218421 SD6 Porcine circovirus type 1/2a NC_013774 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus type — FJ655418 1/2a Porcine circovirus type 2-B NC_005148 vertebrates 4 Circoviridae,Circovirus,Porcine circovirus 2 — KC261601,KC261600 ,AF112862,GU79957 6 Porcine circovirus type 2-C NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — AF109398 Porcine circovirus type 2-D NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — AF117753 Porcine circovirus type 2-E NC_005148 vertebrates 1 Circoviridae,Circovirus,Porcine circovirus 2 — AF109399 Porcine coronavirus NC_016990 vertebrates 2 Coronaviridae, Deltacoronavirus, Porcine — JQ065043,JQ065042 HKU15 coronavirus HKU15 Porcine cytomegalovirus NC_022233 vertebrates 1 H erpesviridae,Cytomegalovirus, Porcine — KF017583 cytomegalovirus Porcine NC_001479 vertebrates 2 Picornaviridae,Cardiovirus,Encephalomyocard DQ517424,HM64189 encephalomyocarditis virus itis virus 7 Porcine endogenous NC_003059 vertebrates 5 Retroviridae,Gammaretrovirus,Porcine type-C — EU523109,A66553,A retrovirus oncovirus XQ52638,A66552,AX 175461 Porcine endogenous NC_003059 vertebrates 2 Retroviridae,Gammaretrovirus,Porcine type-C — EF133960,HM159246 retrovirus C oncovirus Porcine endogenous NC_003059 vertebrates 2 Retroviridae,Gammaretrovirus,Porcine type-C — AY953542,AY570980 retrovirus C/A oncovirus Porcine endogenous NC_003059 vertebrates 1 Retroviridae,Gammaretrovirus,Porcine type-C — AF356697 retrovirus E oncovirus Porcine enterovirus 10 NC_004441 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus G — AF363455 Porcine enterovirus 15 NC_004441 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus G — JN807387 Porcine enterovirus 3H NC_004441 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus G — HQ702854 Porcine enterovirus 9 NC_004441 vertebrates 2 Picornaviridae,Enterovirus,Enterovirus G — Y14459,HM131607 Porcine enterovirus B NC_004441 vertebrates 2 Picornaviridae,Enterovirus,Enterovirus G — AF363453,JQ818253 Porcine epidemic diarrhea NC_003436 vertebrates 32 Coronaviridae,Alphacoronavirus,Porcine — KF272920,KF650374, virus epidemic diarrhea virus KF650372,KC140102 ,JQ282909,EF185992 ,KC210145,KF46875 2,KC210147,KF6503 71,KC109141,JN5472 28,JX112709,KF4687 53,JX524137,JX5607 61,KC196276,KC189 944,JX188454,KC210 146,JX489155,JXQ88 695,KF650370,KF384 500,JX261936,KF650 375,AF353511,KF650 373,KF468754,JN825 712,GU937797,KF26 7450 Porcine kobuvirus NC_011829 vertebrates 9 Picornaviridae,Kobuvirus,Aichivirus C — KC424638,JX401523, ,NC_01676 JX177612,KC424639, 9 KF695124,KC204684 ,JQ692069,KC42464 0,JX827598 Porcine kobuvirus swine/K- NC_011829 vertebrates 1 Picornaviridae,Kobuvirus,Aichivirus C — GQ249161 30-HUN/2008/HUN ,NC_01676 9 Porcine kobuvirus swine/S- NC_011829 vertebrates 1 Picornaviridae,Kobuvirus,Aichivirus C — EU787450 1-HUN/2007/H ungary ,NC_01676 9 Porcine partetravirus NC_022104 vertebrates 1 Parvoviridae,Porcine partetravirus — KC992732 Porcine parvovirus NC_001718 vertebrates 26 Parvoviridae,Parvovirus,Porcine parvovirus — KF913346,KF913348, KF429253,AY684869, EU790641,JN872448, M38367,L23427,JX99 2846,KF913345,KF91 3349,U44978,KF9133 47,KF913351,AY5833 18,KF429252,EU790 642,FJ822038,DQ675 456,KF913350,DQ062 3,JN968975,KF42925 5,KF742500,HM9890 09,KF429254 Porcine parvovirus 4 NC_014665 vertebrates 9 Parvoviridae,Parvovirus,Porcine parvovirus 4 — GQ387500,GU97896 5,GU978968,HM0311 34,GU978966,GU978 967,GQ387499,GU97 8964,HM031135 Porcine parvovirus 5 NC_023020 vertebrates 6 Parvoviridae,Parvovirus,Porcine parvovirus 5 — JX896320,KF661535, JX896322,JX896319, JX896321,JX896318 Porcine pestivirus isolate NC_023176 vertebrates 1 Flaviviridae,Pestivirus,Porcine pestivirus — EF100713 Bungowannah isolate Bungowannah Porcine reovirus SHR-A NC_004274 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415472 orthoreovirus L3 Porcine reovirus SHR-A NC_004275 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415467 orthoreovirus L2 Porcine reovirus SHR-A NC_004276 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415473 orthoreovirus S4 Porcine reovirus SHR-A NC_004277 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415469 orthoreovirus S1 Porcine reovirus SHR-A NC_004278 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415471 orthoreovirus M2 Porcine reovirus SHR-A NC_004279 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415465 orthoreovirus S2 Porcine reovirus SHR-A NC_004280 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415468 orthoreovirus M1 Porcine reovirus SHR-A NC_004281 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415474 orthoreovirus M3 Porcine reovirus SHR-A NC_004282 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415466 orthoreovirus L1 Porcine reovirus SHR-A NC_004283 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415470 orthoreovirus S3 Porcine reovirus SHR-A NC_013228 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415471 orthoreovirus M2 Porcine reovirus SHR-A NC_013230 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415474 orthoreovirus M3 Porcine reovirus SHR-A NC_013232 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415465 orthoreovirus S2 Porcine reovirus SHR-A NC_013234 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. JX415473 orthoreovirus S4 Porcine reproductive and NC_001961 vertebrates 327 Arteriviridae,Arterivirus, Porcine reproductive — HQ843178,JQ663542 respiratory syndrome virus and respiratory syndrome virus ,JQ663545,GU73726 4,FJ950746,EU26260 3,KF287142,EF51796 2,EU200962,JQ3098 22,JQ308798,FJ9507 47,HQ699067,KC422 730,KC862570,DQ17 6020,KC862567,HM2 14915,JX192638,GU 047344,EU880438,J 0326271,KF287133, GU168568,EU187484 ,JN660150,JX192637 ,GU143913,JX31764 8,EU880436,EF5360 00,JQ663561,EU200 961,JF268681,DQ459 471,KC862574,GQ47 5526,HQ315836,EU1 06888,KC492506,JQ 663541,EU864232,E U097707,EF484031, KC422725,GU168567 ,GQ914997,KF28713 4,JN662424,FJ39345 8,AY612613,KF28713 9,JF800911,JQ66355 8,JQ663544,AF32569 1,JQ663563,EU8804 37,EF532802,GU454 850,FJ393456,JQ663 547,JQ663568,FJ349 261,JX215553,JX878 379,EF536001,JX215 554,KC862573,KF28 7135,KF555450,KF28 7137,EU880435,EU7 08726,JF796180,JX2 58843,JQ663546,KF2 87132,EF532805,KC 422729,JQ955657,D 0176021,JQ715698, GU232738,HM18967 6,KC862577,KC4227 28,FJ548855,FJ3934 59,HQ843180,EF532 801,EF484033,EU88 0434,EF535999,JQ66 3566,EU807840,EF5 36002,JQ663567,EU 880442,KC469618,J 0804986,JF268674,E F112445,DQ473474, KC862566,EU109503 ,EF532806,EF641008 ,EU864231,KC49250 5,JQ663553,EU2362 59,EF488739,DQ864 705,JQ663551,JX192 635,EU880431,JQ66 3549,JX235365,FJ17 5687,AF184212,JX17 7644,EU360130,JX31 7649,KC862579,EU1 09502,EF112446,EF5 32810,EF532813,KC 862584,AF494042,EF 532819,EU939312,A Y424271,HM016158, AF066183,KF203132, EF153486,GQ359108 ,JQ663555,JN864948 ,GU169411,JF268673 ,DQ988080,JQ66356 4,AY032626,KC8625 75,JF268683,KC8625 76,FJ895329,AY3665 25,JQ663540,GQ374 441,DQ056373,EU07 6704,HQ233604,JQ6 63556,GQ374442,KF 632717,JN654459,JQ 309823,GU269541,FJ 548851,EU678352,JX 215552,JX217036,FJ 950744,JF268680,JX 857698,EU880433,E F075945,JX512910,J X235367,JQ087873,K F555451,JQ663565,K C862583,EF532804, EU360129,EU860249 ,FJ393457,JN387272, GQ351601,AY150564 ,KF611905,JQ663562 ,GU232737,JN62628 7,HM011104,GU1685 69,KC862581,EF532 807,EF532811,JX192 633,HQ233605,GU23 2735,JN387274,DQ2 17415,EU860248,JF2 68676,JQ663543,DO 779791,EF532818,EF 532808,KF287138,KF 815525,FJ950745,AB 288356,GQ461593,G U232736,GU461292, JXQ87437,JQ663560, JX235370,JQ663548, KC862572,HM01615 9,KF287136,FJ54885 4,EU880439,KC8625 69,EF635006,AY5459 85,JX215551,FJ8891 29,DQ489311,JF2686 78,AF159149,JF2686 72,EU880443,KC422 727,GQ499193,AF33 1831,FJ524376,EU86 4233,JN387273,DQ1 76019,JQ663559,HQ 315835,FJ548852,JF 268684,FJ175689,H M853673,KC862585, EU880441,KC527830 ,EF532816,JF268677 ,FJ899592,EF112447 ,HM214913,U87392, KC862568,GQ49919 6,FJ536165,JF26868 2,KC445138,EF5328 09,JF268675,GQ857 656,JF802085,JX878 380,EU825724,JX192 634,JX235366,HQ84 3179,JN256115,KC42 2731,JQ743666,JX19 2639,FJ797690,KC86 2571,HQ315837,FJ88 9130,EU097706,HQ8 43181,FJ548853,EF5 36003,KF287143,GQ 499195,EF532812,K C492504,JN387271,K C862580,JN654458,J X192636,JQ663554,E F532815,JXQ44140,A F176348,GU067771,J 0663550,JF748717,J 0663552,KC422726, EF532817,JX912249, HM214914,JX880029 ,JX192632,JF268679, EU144079,JQ955658 ,EU825723,GQ49919 4,EF488048,JQ71569 7,EU360128,KF2871 41,AY585241,FJ5243 77,FJ394029,KC8625 78,FJ175688,KC8625 82,EU880432,AF046 869,EF532803,JF748 718,GQ330474,EF53 2814,EU880440,KF2 87140,GUO47345,HQ 401282,JQ663557,E U624117 Porcine sapelovirus NC_003987 vertebrates 3 Picornaviridae,Sapelovirus,Porcine — HQ875059,KF539414 sapelovirus ,JX286666 Porcine sapelovirus 1 NC_003987 vertebrates 1 Picornaviridae,Sapelovirus,Porcine — AF406813 sapelovirus Porcine teschovirus NC_003985 vertebrates 30 Picornaviridae,Teschovirus, Porcine — AF296102,GQ914053 teschovirus ,AF231769,AF296118 ,AF296111,AF296112 ,AF296113,HQ02037 8,AF296107,AF29609 2,AF296103,AF29611 5,KC667563,JQ4294 05,AF296089,AF2960 91,GU446660,AF231 767,AF296090,AF296 109,AF296104,AF231 768,AJQ11380,AF296 100,DQ355222,AF29 6087,AF296088,AF29 6117,KC667562,AF2 96108 Porcine teschovirus 1 NC_003985 vertebrates 1 Picornaviridae,Teschovirus, Porcine — AB038528 teschovirus Porcine teschovirus 10 NC_003985 vertebrates 2 Picornaviridae,Teschovirus, Porcine — AF296119,AF296095 teschovirus Porcine teschovirus 11 NC_003985 vertebrates 1 Picornaviridae,Teschovirus, Porcine — AF296096 teschovirus Porcine teschovirus 4 NC_003985 vertebrates 1 Picornaviridae,Teschovirus, Porcine — JQ975417 teschovirus Porcine teschovirus 8 NC_003985 vertebrates 5 Picornaviridae,Teschovirus, Porcine — JQ664746,GQ293092 teschovirus ,KC757344,AF29609 3,JN710381 Porcine teschovirus 9 NC_003985 vertebrates 1 Picornaviridae,Teschovirus, Porcine — AF296094 teschovirus Porcine torovirus NC_022787 vertebrates 1 Coronaviridae,Torovirus,Porcine torovirus — JQ860350 Possum enterovirus W1 NC_008714 vertebrates 1 Picornaviridae,Enterovirus,Possum — AY462106 enterovirus W1 Possum enterovirus W6 NC_008715 vertebrates 1 Picornaviridae,Enterovirus,Possum — AY462107 enterovirus W6 PreXMRV-1 NC_007815 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — FR871849 leukemia-related retroviruses Procyon lotor NC_007150 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Lamb — AY763115 papillomavirus 1 dapapillomavirus 4 Pseudocowpox virus NC_013804 vertebrates 2 Poxviridae,Parapoxvirus,Pseudocowpox virus — GQ329670,GQ32966 9 Psittacid herpesvirus 1 NC_005264 vertebrates 1 Herpesviridae,Iltovirus,Psittacid herpesvirus 1 — AY372243 Psittacus erithacus timneh NC_003973 vertebrates 2 Papillomaviridae,Thetapapillomavirus,Thetapa — AF502599,AF420235 papillomavirus pillomavirus 1 Pteronotus polyomavirus NC_020070 vertebrates 1 Polyomaviridae,Polyomavirus,Pteronotus — JX520662 polyomavirus Puma concolor NC_004765 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Lamb — AY904723 papillomavirus type 1 dapapillomavirus 1 Pygmy chimpanzee NC_001355 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — X62844 papillomavirus type 1 pillomavirus 10 Quail picornavirus NC_016403 vertebrates 1 Picornaviridae, Quail picornavirus — JN674502 QPV1/HUN/2010 QPV1/HUN/2010 RD114 retrovirus NC_009889 vertebrates 2 Retroviridae,Gammaretrovirus,RD114 — AB559882,EU030001 retrovirus Rabbit calicivirus Australia NC_011704 vertebrates 1 Caliciviridae,Lagovirus,Rabbit calicivirus — EU871528 1 MIC-07 Australia 1 MIC-07 Rabbit coronavirus HKU14 NC_017083 vertebrates 4 Coronaviridae,Betacoronavirus,Rabbit — JN874559,JN874562, coronavirus HKU14 JN874561,JN874560 Rabbit fibroma virus NC_001266 vertebrates 1 Poxviridae,Leporipoxvirus,Rabbit fibroma virus — AF170722 Rabbit hemorrhagic NC_001543 vertebrates 35 Caliciviridae,Lagovirus,Rabbit hemorrhagic — DQ280493,EF363035 disease virus disease virus ,EF558586,DQ18907 7,JX886001,AB30069 3,EF558576,EF55858 2,M67473,KC595270, DQ189078,EU003579 ,EF558572,EF558578 ,EF558580,EF558574 ,AF295785,EF558577 ,AY523410,HM62330 9,EU003582,EF5585 85,EU003578,AF258 618,DQ205345,EU00 3581,EF558584,EU0 03580,EF558579,JF4 12629,EF558575,EF5 58581,EF558573,EF5 58583,JX886002 Rabbit hemorrhagic NC_001543 vertebrates 1 Caliciviridae,Lagovirus,Rabbit hemorrhagic — Z49271 disease virus-AST89 disease virus Rabbit hemorrhagic NC_001543 vertebrates 1 Caliciviridae,Lagovirus,Rabbit hemorrhagic — X87607 disease virus-BS89 disease virus Rabbit hemorrhagic NC_001543 vertebrates 1 Caliciviridae,Lagovirus,Rabbit hemorrhagic — Z29514 disease virus-SD disease virus Rabbit hemorrhagic NC_001543 vertebrates 1 Caliciviridae,Lagovirus,Rabbit hemorrhagic — U54983 disease virus-V351 disease virus Rabbit oral papillomavirus NC_002232 vertebrates 1 Papillomaviridae,Kappapapillomavirus,Kappap — AF227240 apillomavirus 1 Rabbit vesivirus NC_008580 vertebrates 1 Caliciviridae,Vesivirus,Rabbit vesivirus — AJ866991 Rana grylio iridovirus NC_005946 vertebrates 1 Indoviridae,Ranavirus,Frog virus 3 — JQ654586 Rangifer tarandus NC_021930 vertebrates 1 Papillomaviridae,Rangifer tarandus — KC810012 papillomavirus 2 papillomavirus 2 Ranid herpesvirus 1 NC_008211 vertebrates 1 Alloherpesviridae,Batrachovirus,Ranid — DQ665917 herpesvirus 1 Ranid herpesvirus 2 NC_008210 vertebrates 1 Alloherpesviridae,Batrachovirus,Ranid — DQ665652 herpesvirus 2 Raptor adenovirus A NC_015455 vertebrates 1 Adenoviridae,Siadenovirus,Raptor adenovirus — EU715130 A Rat coronavirus NC_012936 vertebrates 2 Coronaviridae,Betacoronavirus,Murine — JF792616,JF792617 ,NC_00184 coronavirus 6 Rat coronavirus Parker NC_012936 vertebrates 1 Coronaviridae,Betacoronavirus,Murine — FJ938068 ,NC_00184 coronavirus 6 Rat theilovirus 1 NC_009448 vertebrates 2 Picornaviridae,Cardiovirus,Theilovirus — EU542581,EU815052 ,NC_00136 6,NC_0108 10 Rattus norvegicus NC_008519 vertebrates 1 Papillomaviridae,Pipapillomavirus,Pipapilloma — GQ180114 papillomavirus 1 EES-2009 virus 1 Raven circovirus NC_008375 vertebrates 1 Circoviridae,Circovirus,Raven circovirus — DQ146997 Redspotted grouper NC_008040 vertebrates 5 Nodaviridae,Betanodavirus,Redspotted seg. GQ402010,AY324869 nervous necrosis virus grouper nervous necrosis virus RNA 1 ,AY369136,GQ40201 2,EF558368 Redspotted grouper NC_008041 vertebrates 6 Nodaviridae,Betanodavirus,Redspotted seg. AY744705,AY324870 nervous necrosis virus grouper nervous necrosis virus RNA 2 ,GQ402011,EF55836 9,AY690596,GQ4020 13 Reindeer papillomavirus NC_001524 vertebrates 1 Papillomaviridae,Deltapapillomavirus,Deltapap — AF443292 illomavirus 1 Reovirus sp,T2W NC_004276 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. DQ220019 orthoreovirus S4 Reovirus sp,T2W NC_004277 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. DQ220017 orthoreovirus S1 Reovirus sp,T2W NC_004279 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. DQ220020 orthoreovirus S2 Reovirus sp,T2W NC_004283 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. DQ220018 orthoreovirus S3 Reovirus sp,T2W NC_013232 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. DQ220020 orthoreovirus S2 Reovirus sp,T2W NC_013234 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. DQ220019 orthoreovirus S4 Reovirus sp,T3C43-MA NC_004277 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. U74293 orthoreovirus S1 Reovirus sp,T3C44-MA NC_004277 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. U74292 orthoreovirus S1 Reovirus sp,T3C84-MA NC_004277 vertebrates 1 Reoviridae,Orthoreovirus,Mammalian seg. U74291 orthoreovirus S1 Reptile vesivirus Crol NC_002551 vertebrates 1 Caliciviridae,Vesivirus,Vesicular exanthema of — JXQ47864 swine virus Reticuloendotheliosis virus NC_006934 vertebrates 10 Retroviridae,Gammaretrovirus,Reticuloendoth — FJ496333,FJ439119, eliosis virus DQ003591,DQ38745 0,FJ439120,JX91271 0,GQ375848,GQ4156 46,KF305089,AY8429 51 Rhesus monkey NC_001678 vertebrates 1 Papillomaviridae,Alphapapillomavirus,Alphapa — M60184 papillomavirus 1 pillomavirus 12 Rhesus monkey NC_003401 vertebrates 1 Herpesviridae,Rhadinovirus,Macacine — AF210726 rhadinovirus H26-95 herpesvirus 5 Rhesus papillomavirus type NC_001678 vertebrates 2 Papillomaviridae,Alphapapillomavirus,Alphapa — EF591300,FJ598133 1b pillomavirus 12 Rhinolophus bat NC_009988 vertebrates 4 Coronaviridae,Alphacoronavirus,Rhinolophus — EF203066,EF203065, coronavirus HKU2 bat coronavirus HKU2 EF203067,EF203064 Rhinovirus C NC_009996 vertebrates 3 Picornaviridae,Enterovirus,Rhinovirus C — GQ223228,JXQ74056 ,GQ223227 Rock bream iridovirus NC_003494 vertebrates 2 Incloviridae,Megalocytivirus,Infectious spleen — KC244182,AY532606 and kidney necrosis virus Rodent herpesvirus Peru NC_015049 vertebrates 2 Herpesviridae,Rodent herpesvirus Peru — HQ698924,HQ22196 3 Rodent pegivirus NC_021154 vertebrates 1 Flaviviridae,Pegivirus,Rodent pegivirus — KC815311 Ross's goose hepatitis B NC_005888 vertebrates 3 Hepadnaviridae, Ross's goose hepatitis B — AY494849,AY494848 virus ,NC_005950 virus ,M95589 Rotavirus D NC_014511 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 1 GU733443 chicken/05V0049/DEU/2005 Rotavirus D NC_014512 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 2 GU733444 chicken/05V0049/DEU/2005 Rotavirus D NC_014513 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 3 GU733445 chicken/05V0049/DEU/2005 Rotavirus D NC_014514 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 4 GU733446 chicken/05V0049/DEU/2005 Rotavirus D NC_014515 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 5 GU733447 chicken/05V0049/DEU/2005 Rotavirus D NC_014516 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 6 GU733448 chicken/05V0049/DEU/2005 Rotavirus D NC_014517 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 7 GU733449 chicken/05V0049/DEU/2005 Rotavirus D NC_014518 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 8 GU733450 chicken/05V0049/DEU/2005 Rotavirus D NC_014519 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. 9 GU733451 chicken/05V0049/DEU/2005 Rotavirus D NC_014520 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. GU733452 chicken/05V0049/DEU/2005 10 Rotavirus D NC_014521 vertebrates 1 Reoviridae,Rotavirus,Rotavirus D seg. GU733453 chicken/05V0049/DEU/2005 11 Rous sarcoma virus NC_001407 vertebrates 3 Retroviridae,Alpharetrovirus,Rous sarcoma — V01197,X68524,AF03 virus 3808 Rous sarcoma virus- NC_001407 vertebrates 1 Retroviridae,Alpharetrovirus,Rous sarcoma — JQ2342 Prague C virus Rous sarcoma virus- NC_001407 vertebrates 1 Retroviridae,Alpharetrovirus,Rous sarcoma — AF052428 Schmidt-Ruppin B virus Rous sarcoma virus- NC_001407 vertebrates 1 Retroviridae,Alpharetrovirus,Rous sarcoma — D10652 Schmidt-Ruppin D virus Rousettus aegyptiacus NC_008298 vertebrates 1 Papillomaviridae,Psipapillomavirus,Psipapillo — DQ366842 papillomavirus type 1 mavirus 1 Rousettus bat coronavirus NC_018871 vertebrates 2 Coronaviridae,Alphacoronavirus,Bat — JQ989271,JQ989270 HKU10 coronavirus HKU10 Rousettus bat coronavirus NC_009021 vertebrates 1 Coronaviridae,Betacoronavirus,Rousettus bat — EF065513 HKU9 coronavirus HKU9 SIVcpz Ptt-04Cam155 NC_001549 vertebrates 1 Retroviridae,Lentivirus,Simian — FR686510 ,NC_00445 immunodeficiency virus 5 SIVcpz Ptt-09Cam155 NC_001549 vertebrates 1 Retroviridae,Lentivirus,Simian — FR686511 ,NC_00445 immunodeficiency virus 5 STL polyomavirus NC_020106 vertebrates 3 Polyomaviridae,Polyomavirus,STL — KF525270,JX463184, polyomavirus JX463183 Sable antelope coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — EF424621 U S/OH 1/2003 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 Saffold virus NC_009448 vertebrates 11 Picornaviridae,Cardiovirus,Theilovirus — HM181998,FM20748 ,NC_00136 7,JF813004,HM1819 6,NC_0108 97,HM181996,HQ902 10 242,HM181999,HQ16 2476,EF165067,GU9 43513,FN999911 Saimiriine herpesvirus 1 NC_014567 vertebrates 1 Herpesviridae,Simplexvirus,Saimiriine — HM625781 herpesvirus 1 Saimiriine herpesvirus 2 NC_001350 vertebrates 2 Herpesviridae,Rhadinovirus,Saimiriine — AJ410493,X64346 herpesvirus 2 Saimiriine herpesvirus 3 NC_016448 vertebrates 1 Herpesviridae,Cytomegalovirus,Saimiriine — FJ483967 herpesvirus 3 Salivirus NC_012957 vertebrates 1 Picornaviridae,Salivirus,Salivirus A — JN379039 ,NC_01298 6 Salivirus A NC_012957 vertebrates 1 Picornaviridae,Salivirus,Salivirus A — GU245894 ,NC_01298 6 Salivirus NG-J1 NC_012957 vertebrates 1 Picornaviridae,Salivirus,Salivirus A — GQ179640 ,NC_01298 6 Sambar deer coronavirus NC_010327 vertebrates 2 Coronaviridae,Betacoronavirus,Betacoronavir — FJ425188,FJ425190 US/OH-WD388-TC/1994 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 Sambar deer coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — FJ425189 US/OH-W D388/1994 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 San Miguel sea lion virus NC_002551 vertebrates 1 Caliciviridae,Vesivirus,Vesicular exanthema of — U15301 swine virus Scotophilus bat coronavirus NC_009657 vertebrates 1 Coronaviridae,Alphacoronavirus,Scotophilus — DQ648858 512 bat coronavirus 512 Sea turtle tornovirus 1 NC_012094 vertebrates 9 Sea turtle tornovirus 1 — EU867817,EU867823 ,EU867821,EU86782 2,EU867816,EU8678 20,EU867818,EU867 824,EU867819 Seal picornavirus type 1 NC_009891 vertebrates 1 Picornaviridae,Aquamavirus,Aquamavirus A — EU142040 Sebokele virus 1 NC_021482 vertebrates 1 Picornaviridae,Parechovirus,Sebokele virus 1 — HF677705 Seneca valley virus NC_011349 vertebrates 2 Picornaviridae,Senecavirus,Seneca valley — DQ641257,KC667560 virus Sevenband grouper NC_008040 vertebrates 1 Nodaviridae,Betanodavirus,Redspotted seg. AB373028 nervous necrosis virus grouper nervous necrosis virus RNA 1 Sevenband grouper NC_008041 vertebrates 1 Nodaviridae,Betanodavirus,Redspotted seg. AB373029 nervous necrosis virus grouper nervous necrosis virus RNA 2 Sheeppox virus NC_004002 vertebrates 1 Poxviridae,Capripoxvirus,Sheeppox virus — AY077832 Sheeppox virus A NC_004002 vertebrates 1 Poxviridae,Capripoxvirus,Sheeppox virus — AY077833 Sheeppox virus NISKHI NC_004002 vertebrates 1 Poxviridae,Capripoxvirus,Sheeppox virus — AY077834 Sheldgoose hepatitis B NC_005890 vertebrates 2 Hepadnaviridae, Sheldgoose hepatitis B virus — AY494853,AY494852 virus Simian T-cell lymphotropic NC_011546 vertebrates 1 Retroviridae,Deltaretrovirus,Simian T-cell — EU231644 virus 6 lymphotropic virus 6 Simian T-lymphotropic NC_000858 vertebrates 4 Retroviridae,Deltaretrovirus,Primate T- — Z46900,AF074966,JX virus 1 NC_00143 lymphotropic virus 1 987040,AY590142 6 Simian T-lymphotropic NC_001815 vertebrates 2 Retroviridae,Deltaretrovirus,Primate T- — Y14570,U90557 virus 2 ,NC_00148 lymphotropic virus 2 8 Simian T-lymphotropic NC_003323 vertebrates 5 Retroviridae,Deltaretrovirus,Primate T- — AY217650,Y07616,A virus 3 lymphotropic virus 3 F391797,AF517775,A Y222339 Simian adenovirus 1 NC_006879 vertebrates 1 Adenoviridae,Mastadenovirus,Human — AY771780 adenovirus G Simian adenovirus 18 NC_022266 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — FJQ25931 adenovirus 18 Simian adenovirus 20 NC_020485 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — HQ605912 adenovirus 20 Simian adenovirus 22 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — AY530876 ,NC_01782 adenovirus E 5 Simian adenovirus 23 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — AY530877 ,NC_01782 adenovirus E 5 Simian adenovirus 24 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — AY530878 ,NC_01782 adenovirus E 5 Simian adenovirus 25 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — AF394196 ,NC_01782 adenovirus E 5 Simian adenovirus 25,2 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — FJQ25918 ,NC_01782 adenovirus E 5 Simian adenovirus 26 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — FJQ25923 ,NC_01782 adenovirus E 5 Simian adenovirus 3 NC_006144 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — AY598782 adenovirus A Simian adenovirus 30 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — FJQ25920 ,NC_01782 adenovirus E 5 Simian adenovirus 36 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — FJQ25917 ,NC_01782 adenovirus E 5 Simian adenovirus 37,1 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — FJQ25921 ,NC_01782 adenovirus E 5 Simian adenovirus 37,2 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — FJQ25919 ,NC_01782 adenovirus E 5 Simian adenovirus 38 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — FJQ25922 ,NC_01782 adenovirus E 5 Simian adenovirus 39 NC_003266 vertebrates 1 Adenoviridae,Mastadenovirus,Human — FJQ25924 ,NC_01782 adenovirus E 5 Simian adenovirus 49 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — HQ241819 adenovirus B Simian adenovirus 50 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — HQ241820 adenovirus B Simian adenovirus 6 NC_006144 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JQ776547 adenovirus A Simian adenovirus A1139 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880448 adenovirus B Simian adenovirus A1163 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880449 adenovirus B Simian adenovirus A1173 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880450 adenovirus B Simian adenovirus A1258 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880451 adenovirus B Simian adenovirus A1285 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880452 adenovirus B Simian adenovirus A1296 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880453 adenovirus B Simian adenovirus A1312 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880454 adenovirus B Simian adenovirus A1327 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880455 adenovirus B Simian adenovirus A1335 NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — JN880456 adenovirus B Simian adenovirus B NC_015225 vertebrates 1 Adenoviridae,Mastadenovirus,Simian — KC693021 adenovirus B Simian adenovirus C NC_021168 vertebrates 3 Adenoviridae,Mastadenovirus,Simian — KC693024,KC693023 adenovirus C ,KC693022 Simian endogenous NC_001550 vertebrates 1 Retroviridae,Betaretrovirus,Mason-Pfizer — JN134185 retrovirus vero ATCC CCL- monkey virus 81 Simian enterovirus A NC_003988 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus H — AF201894 Simian enterovirus 5V4 NC_003988 vertebrates 1 Picornaviridae,Enterovirus,Enterovirus H — AF326759 Simian foamy virus NC_001364 vertebrates 5 Retroviridae,Spumavirus,Simian foamy virus — JQ867465,JQ867462, JQ867464,U04327,J 0867463 Simian foamy virus-gorilla NC_001364 vertebrates 1 Retroviridae,Spumavirus,Simian foamy virus — HM245790 Simian foamy virus- NC_001364 vertebrates 1 Retroviridae,Spumavirus,Simian foamy virus — AJ544579 orangutan Simian hemorrhagic fever NC_003092 vertebrates 1 Arteriviridae,Arterivirus,Simian hemorrhagic — AF180391 virus fever virus Simian hepatitis A virus NC_001489 vertebrates 2 Picornaviridae,Hepatovirus,Hepatitis A virus — EU140838,DQ0924 Simian immunodeficiency NC_001549 vertebrates 109 Retroviridae,Lentivirus,Simian — JN091690,AY597209, virus ,NC_00445 immunodeficiency virus AB253736,AY340700 5 ,AF328295,DQ37306 3,EU280804,AF0752 69,EF070331,EF5359 93,EF394357,M3132 5,U79412,AY611486, M27470,AY169968,E F070330,AY603959,A Y576480,M19499,EU 280805,AY599198,D 0201174,JN835461, AY611488,AY607702 ,AJ271369,AY599201 ,AY159322,AY52386 6,AY576481,DQ3746 58,AY588945,DQ201 173,AY611494,AB17 7846,AF103818,AM7 13177,EF070329,X52 154,AY588946,M327 41,FJ424863,DQ3746 57,M30931,EF39435 8,JQ866001,AY61149 1,M58410,JQ864084, M33262,M29975,AF3 82829,EF535994,AF0 77017,FR751162,M6 6437,FJ424865,AF46 8658,EU280806,AY6 07703,AY340701,FJ4 24871,FJ424864,FJ4 24866,AY607701,AY 611487,AY611492,AF 468659,AF301156,AY 611489,AY523865,M 76764,JN091691,AY5 99200,JQ864086,EF3 94356,AF131870,M8 3293,AY611495,JQ86 4087,DQ373064,AF1 15393,JN835462,EU2 80803,DQ201172,AY 655744,AY587015,L0 6042,JN835460,AY60 0249,AF334679,U727 48,XQ7805,L03295,A J580407,DQ373066, AY611493,AM745105 ,AY159321,AY52386 7,DQ373065,AY6077 04,AY599199,AM182 197,JQ864085,AF382 828,AY611490,AF447 763 Simian immunodeficiency NC_001549 vertebrates 1 Retroviridae,Lentivirus,Simian — U04005 virus-agm,sab-1 ,NC_00445 immunodeficiency virus 5 Simian immunodeficiency NC_001549 vertebrates 1 Retroviridae,Lentivirus,Simian — U58991 virus-agm,tan-1 ,NC_00445 immunodeficiency virus 5 Simian immunodeficiency NC_001549 vertebrates 1 Retroviridae,Lentivirus,Simian — AY033233 virus 17E-CI ,NC_00445 immunodeficiency virus 5 Simian immunodeficiency NC_001549 vertebrates 1 Retroviridae,Lentivirus,Simian — AY033146 virus 17E-Fr ,NC_00445 immunodeficiency virus 5 Simian retrovirus 1 NC_001550 vertebrates 2 Retroviridae,Betaretrovirus,Mason-Pfizer — M11841,U85505 monkey virus Simian retrovirus 2 NC_001550 vertebrates 3 Retroviridae,Betaretrovirus,Mason-Pfizer — M16605,AF126467,A monkey virus F126468 Simian retrovirus 4 NC_014474 vertebrates 3 Retroviridae,Betaretrovirus,Simian retrovirus 4 — FJ979639,FJ971077, FJ979638 Simian sapelovirus 1 NC_004451 vertebrates 1 Picornaviridae,Sapelovirus,Simian sapelovirus — AY064708 Simian virus 12 NC_007611 vertebrates 2 Polyomaviridae,Polyomavirus,Simian virus 12 — DQ435829,AY614708 Singapore grouper NC_006549 vertebrates 1 Incloviridae,Ranavirus,Singapore grouper — AY521625 iridovirus iridovirus Siniperca chuatsi NC_008514 vertebrates 1 Rhabdoviridae, Siniperca chuatsi rhabdovirus — DQ399789 rhabdovirus Small ruminant lentivirus NC_001463 vertebrates 1 Retroviridae,Lentivirus,Caprine arthritis — HM210570 encephalitis virus Snake adenovirus 1 NC_009989 vertebrates 1 Adenoviridae,Atadenovirus,Snake adenovirus — DQ106414 A Snake parvovirus 1 NC_006148 vertebrates 1 Parvoviridae,Dependovirus,Snake parvovirus — AY349010 1 Snakehead retrovirus NC_001724 vertebrates 1 Retroviridae, Snakehead retrovirus — U26458 Snakehead rhabdovirus NC_000903 vertebrates 1 Rhabdoviridae,Novirhabdovirus,Snakehead — AF147498 virus Snow goose hepatitis B NC_005888 vertebrates 4 Hepadnaviridae, Ross's goose hepatitis B — AF110999,AF111000, virus ,NC_00595 virus AF110997,AF110998 0 Soft-shelled turtle iridovirus NC_005946 vertebrates 1 Incloviridae,Ranavirus,Frog virus 3 — EU627010 South polar skua NC_016437 vertebrates 1 Adenoviridae,Siadenovirus,Skua adenovirus A — HM585353 adenovirus-1 Sparrow coronavirus NC_016992 vertebrates 1 Coronaviridae,Deltacoronavirus,Sparrow — JQ065045 HKU17 coronavirus HKU17 Spider monkey foamy virus NC_001364 vertebrates 1 Retroviridae,Spumavirus,Simian foamy virus — EU010385 Spissistilus festinus NC_016874 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 2 JF773383 reovirus Spissistilus festinus NC_016875 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 4 JF773385 reovirus Spissistilus festinus NC_016876 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 6 JF773387 reovirus Spissistilus festinus NC_016877 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 8 JF773389 reovirus Spissistilus festinus NC_016878 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. JF773391 reovirus 10 Spissistilus festinus NC_016879 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 1 JF773382 reovirus Spissistilus festinus NC_016880 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 3 JF773384 reovirus Spissistilus festinus NC_016881 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 5 JF773386 reovirus Spissistilus festinus NC_016882 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 7 JF773388 reovirus Spissistilus festinus NC_016883 vertebrates 1 Reoviridae,Spissistilus festinus reovirus seg. 9 JF773390 reovirus Spleen focus-forming virus NC_001500 vertebrates 1 Retroviridae,Gammaretrovirus,Spleen focus- — K00021 forming virus Spring viraemia of carp NC_002803 vertebrates 4 Rhabdoviridae,Vesiculovirus,Spring viraemia — U18101,AJ318079,E virus of carp virus U177782,DQ491000 Spring viremia of carp virus NC_002803 vertebrates 1 Rhabdoviridae,Vesiculovirus,Spring viraemia — DQ097384 of carp virus Squirrel monkey foamy NC_001364 vertebrates 1 Retroviridae,Spumavirus,Simian foamy virus — GU356394 virus Squirrel monkey NC_009951 vertebrates 1 Polyomaviridae,Polyomavirus,Squirrel monkey — AM748741 polyomavirus polyomavirus Squirrel monkey retrovirus NC_001514 vertebrates 1 Retroviridae,Betaretrovirus,Squirrel monkey — M23385 retrovirus Squirrelpox virus NC_022563 vertebrates 1 Poxviridae,Squirrelpox virus — HE601899 St-Valerien swine virus NC_012699 vertebrates 1 Caliciviridae,St-Valerien swine virus — AB863586 Starling circovirus NC_008033 vertebrates 1 Circoviridae,Circovirus,Starling circovirus — DQ172906 Steller sea lion vesivirus NC_011050 vertebrates 2 Caliciviridae,Vesivirus,Steller sea lion — EF193004,EF195384 vesivirus Stork hepatitis B virus NC_001486 vertebrates 4 Hepadnaviridae,Avihepadnavirus,Heron — AJ251937,AJ251935, hepatitis B virus AJ251936,AJ251934 Striped Jack nervous NC_003448 vertebrates 2 Nodaviridae,Betanodavirus,Striped Jack seg. AB025018,AB056571 necrosis virus nervous necrosis virus RNA 1 Striped Jack nervous NC_003449 vertebrates 2 Nodaviridae,Betanodavirus,Striped Jack seg. AB056572,D30814 necrosis virus nervous necrosis virus RNA 2 Striped bass reovirus NC_007588 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 8 AF450321 Striped bass reovirus NC_007590 vertebrates 2 Reoviridae,Aquareovirus,Aquareovirus A seg. U83396,AF450322 10 Suid herpesvirus 1 NC_006151 vertebrates 6 Herpesviridae,Varicellovirus,Suid herpesvirus — JF797217,BK001744, 1 JQ809330,JQ809329, JF797219,JF797218 Sus scrofa papillomavirus NC_011280 vertebrates 2 Papillomaviridae,Dyodeltapapillomavirus,Dyod — EF395819,EF395818 type 1 eltapapillomavirus 1 Swine pasivirus 1 NC_018226 vertebrates 1 Picornaviridae,Swine pasivirus 1 — JQ316470 Swinepox virus NC_003389 vertebrates 1 Poxviridae,Suipoxvirus,Swinepox virus — AF410153 TGEV Miller M6 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus,Alphacoronav — DQ811785 irus 1 TGEV Miller M60 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus,Alphacoronav — DQ811786 irus 1 TGEV Purdue P115 NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus,Alphacoronav — DQ811788 irus 1 TGEV virulent Purdue NC_002306 vertebrates 1 Coronaviridae,Alphacoronavirus,Alphacoronav — DQ811789 irus 1 Tanapox virus NC_002642 vertebrates 1 Poxviridae,Yatapoxvirus,Tanapox virus — EF420157 ,NC_00988 8 Taterapox virus NC_008291 vertebrates 1 Poxviridae,Orthopoxvirus,Taterapox virus — DQ437594 Theiler's encephalomyelitis NC_009448 vertebrates 9 Picornaviridae,Cardiovirus,Theilovirus — M16020,EU723238,E virus ,NC_00136 U718732,HQ652539, 6,NC_0108 EU718733,M20301,D 10 0401688,M20562,JX 443418 Theiler's-like virus of rats NC_009448 vertebrates 1 Picornaviridae,Cardiovirus,Theilovirus — AB090161 ,NC_00136 6,NC_0108 10 Threadfin reovirus NC_007590 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. AY236219 10 Threadfin reovirus NC_007591 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. AF524892 11 Threadfin reovirus NC_007592 vertebrates 1 Reoviridae,Aquareovirus,Aquareovirus A seg. 6 AY235428 Thrush coronavirus NC_011549 vertebrates 1 Coronaviridae,Deltacoronavirus,Thrush — FJ376621 HKU12-600 coronavirus HKU12 Tiger frog virus NC_005946 vertebrates 1 Incloviridae,Ranavirus,Frog virus 3 — AF389451 Tiger puffer nervous NC_013460 vertebrates 1 Nodaviridae,Betanodavirus,Tiger puffer seg. EU236148 necrosis virus nervous necrosis virus RNA 1 Tiger puffer nervous NC_013461 vertebrates 1 Nodaviridae,Betanodavirus,Tiger puffer seg. EU236149 necrosis virus nervous necrosis virus RNA 2 Titi monkey adenovirus NC_020487 vertebrates 1 Adenoviridae, Titi monkey adenovirus ECC- — HQ913600 ECC-2011 2011 Transmissible NC_002306 vertebrates 10 Coronaviridae,Alphacoronavirus,Alphacoronav — HQ462571,DQ20144 gastroenteritis virus irus 1 7,AJ271965,AX15495 0,KC962433,EU0742 18,C0870486,DQ443 743,HM776941,FJ75 5618 Trichechus manatus NC_006563 vertebrates 1 Papillomaviridae,Rhopapillomavirus,Rhopapill — AY609301 latirostris papillomavirus 1 omavirus 1 Trichechus manatus NC_016898 vertebrates 1 Papillomaviridae,Trichechus manatus — JN709473 latirostris papillomavirus 2 latirostris papillomavirus 2 Trichodysplasia spinulosa- NC_014361 vertebrates 3 Polyomaviridae,Polyomavirus,Trichodysplasia — GU989205,AB873001 associated polyomavirus spinulosa-associated polyomavirus ,JQ723730 Tupaia virus NC_007020 vertebrates 1 Rhabdoviridae, Tupaia virus — AY840978 Tupaiid herpesvirus 1 NC_002794 vertebrates 1 Herpesviridae, Tupaiid herpesvirus 1 — AF281817 Turdivirus 1 NC_014411 vertebrates 2 Picornaviridae,Orthoturdivirus,Turdivirus 1 — GU182406,GU18240 7 Turdivirus 2 NC_014412 vertebrates 2 Picornaviridae,Paraturdivirus,Turdivirus 2 — GU182409,GU18240 8 Turdivirus 3 NC_014413 vertebrates 2 Picornaviridae,Paraturdivirus,Turdivirus 3 — GU182411,GU18241 0 Turkey adenovirus 1 NC_014564 vertebrates 1 Adenoviridae,Aviadenovirus,Turkey — GU936707 adenovirus B Turkey adenovirus 4 NC_022612 vertebrates 1 Adenoviridae,Aviadenovirus,Turkey — KF477312 adenovirus 4 Turkey adenovirus 5 NC_022613 vertebrates 1 Adenoviridae,Aviadenovirus,Turkey — KF477313 adenovirus 5 Turkey adenovirus A NC_001958 vertebrates 1 Adenoviridae,Siadenovirus,Turkey adenovirus — AF074946 A Turkey astrovirus NC_002470 vertebrates 8 Astroviridae,Avastrovirus,Turkey astrovirus — EU143850,EU143845 ,EU143848,EU14384 9,EU143846,EU1438 47, EU143844,Y15936 Turkey astrovirus 2 NC_005790 vertebrates 2 Astroviridae,Avastrovirus,Avastrovirus 3 — EU143843,AF206663 Turkey coronavirus NC_010800 vertebrates 7 Coronaviridae,Gammacoronavirus,Avian — GQ427175,EU02252 ,NC_00145 coronavirus 6,GQ4271 74,GQ4271 1 73,GQ427176,EU022 525,EU095850 Turkey gallivirus NC_018400 vertebrates 1 Picornaviridae, Turkey gallivirus — JQ691613 Turkey hepatitis virus NC_021201 vertebrates 1 Picornaviridae,Megrivirus,Melegrivirus A — HM751199 2993D Tursiops truncatus NC_011109 vertebrates 1 Papillomaviridae,Upsilonpapillomavirus,Upsilo — EU240894 papillomavirus 1 npapillomavirus 1 Tursiops truncatus NC_008184 vertebrates 1 Papillomaviridae,Upsilonpapillomavirus,Upsilo — AY956402 papillomavirus 2 npapillomavirus 2 Tursiops truncatus NC_011109 vertebrates 1 Papillomaviridae,Upsilonpapillomavirus,Upsilo — EU240895 papillomavirus type 3 npapillomavirus 1 Tylonycteris bat NC_009019 vertebrates 1 Coronaviridae,Betacoronavirus,Tylonycteris — EF065505 coronavirus HKU4 bat coronavirus HKU4 UR2 sarcoma virus NC_001618 vertebrates 1 Retroviridae,Alpharetrovirus,UR2 sarcoma — M10455 virus Uncia uncia papillomavirus NC_004765 vertebrates 1 Papillomaviridae,Lambdapapillomavirus,Lamb — DQ180494 type 1 dapapillomavirus 1 Ursus maritimus NC_010739 vertebrates 1 Papillomaviridae,Omegapapillomavirus,Omeg — EF536349 papillomavirus 1 apapillomavirus 1 VESV-like calicivirus NC_002551 vertebrates 1 Caliciviridae,Vesivirus,Vesicular exanthema of — AF091736 swine virus Vervet monkey NC_019844 vertebrates 1 Polyomaviridae,Polyomavirus,Vervet monkey — AB767298 polyomavirus 1 polyomavirus 1 Vesicular exanthema of NC_002551 vertebrates 1 Caliciviridae,Vesivirus,Vesicular exanthema of — U76874 swine virus swine virus Viral hemorrhagic NC_000855 vertebrates 16 Rhabdoviridae,Novirhabdovirus,Viral — AB672614,EU481506 septicemia virus hemorrhagic septicemia virus ,FJ460590,AF143862 ,AF143863,FJ362510 ,GQ385941,FN66578 8,JF792424,Z93412, KF477302,FJ460591, Z93414,AB179621,A B490792,KC778774 Viral hemorrhagic NC_000855 vertebrates 1 Rhabdoviridae,Novirhabdovirus,Viral — AJ233396 septicemia virus (STRAIN hemorrhagic septicemia virus 07-71) Viral hemorrhagic NC_000855 vertebrates 1 Rhabdoviridae,Novirhabdovirus,Viral — Y18263 septicemia virus Fil3 hemorrhagic septicemia virus Visna/Maedi virus NC_001452 vertebrates 7 Retroviridae,Lentivirus,Visna/maedi virus — M10608,M60610,M60 609,L06906,M51543, 555323,A15114 Visna/maedi virus NC_001452 vertebrates 1 Retroviridae,Lentivirus,Visna/maedi virus — HQ848062 Walleye dermal sarcoma NC_001867 vertebrates 3 Retroviridae,Epsilonretrovirus,Walleye dermal — AF033822,L41838,EF virus sarcoma virus 428979 Walrus calicivirus NC_004541 vertebrates 1 Caliciviridae, Walrus calicivirus — AF321298 Waterbuck coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — FJ425185 US/OH-WD358-GnC/1994 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 Waterbuck coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — FJ425184 US/OH-WD358-TC/1994 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 Waterbuck coronavirus NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — FJ425186 US/OH-W D358/1994 ,NC_00773 us 1 2,NC_0051 47,NC_003 045 White bream virus NC_008516 vertebrates 1 Coronaviridae,Bafinivirus,White bream virus — DQ898157 White-eye coronavirus NC_016991 vertebrates 1 Coronaviridae,Deltacoronavirus,White-eye — JQ065044 HKU16 coronavirus HKU16 White-tailed deer NC_010327 vertebrates 1 Coronaviridae,Betacoronavirus,Betacoronavir — FJ425187 coronavirus US/OH- ,NC_00773 us 1 WD470/1994 2,NC_0051 47,NC_003 045 Wigeon coronavirus NC_016995 vertebrates 1 Coronaviridae,Deltacoronavirus,Wigeon — JQ065048 HKU20 coronavirus HKU20 Wood mouse herpesvirus NC_001826 vertebrates 1 Herpesviridae,Rhadinovirus,Murid herpesvirus — GQ169129 4 Woodchuck hepatitis virus NC_004107 vertebrates 19 Hepadnaviridae,Orthohepadnavirus,Woodchuck — KF874491,M11082,M hepatitis virus 19183,M18752,GU73 4791,JQ4514,AY3340 77,KF874493,AY3340 75,AY334076,AY628 100,JQ2442,AY62809 7,AY628099,AY6280 98,KF874492,AY6280 95,AY628096,M9052 0 Woolly monkey sarcoma NC_009424 vertebrates 1 Retroviridae,Gammaretrovirus,Woolly monkey — V01201 virus sarcoma virus XMRV NC_007815 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — FR872816 leukemia-related retroviruses XMRV-like mouse NC_007815 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — JF714652 endogenous retrovirus leukemia-related retroviruses mERV-XL Xenopus laevis NC_010955 vertebrates 1 Retroviridae, Xenopus laevis endogenous — AJ506107 endogenous retrovirus retrovirus Xen1 Xen1 Xenotropic MuLV-related NC_007815 vertebrates 4 Retroviridae,Gammaretrovirus,Murine — HQ154630,GQ49734 virus leukemia-related retroviruses 3,GQ497344,FN6920 43 Xenotropic MuLV-related NC_007815 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — DQ241301 virus VP35 leukemia-related retroviruses Xenotropic MuLV-related NC_007815 vertebrates 1 Retroviridae,Gammaretrovirus,Murine — DQ241302 virus VP42 leukemia-related retroviruses Xenotropic MuLV-related NC_007815 vertebrates 2 Retroviridae,Gammaretrovirus,Murine — EF185282,DQ399707 virus VP62 leukemia-related retroviruses Xenotropic murine NC_001702 vertebrates 2 Retroviridae,Gammaretrovirus,Murine — JF908816,JF908815 leukemia virus ,NC_00181 leukemia virus 9,NC_0013 62,NC_001 501 Y73 sarcoma virus NC_008094 vertebrates 2 Retroviridae,Alpharetrovirus,Y73 sarcoma — V01170,L21974 virus Yaba monkey tumor virus NC_005179 vertebrates 1 Poxviridae,Yatapoxvirus,Yaba monkey tumor — AY386371 virus Yaba-like disease virus NC_002642 vertebrates 1 Poxviridae,Yatapoxvirus,Tanapox virus — AJ293568 ,NC_00988 8 Yellowtail ascites virus NC_004168 vertebrates 3 Birnaviridae,Aquabirnavirus,Yellowtail ascites seg. AB281673,AB011440 virus RNA A ,AB006783 Yellowtail ascites virus NC_004176 vertebrates 2 Birnaviridae,Aquabirnavirus,Yellowtail ascites seg. AY129662,AB281674 virus RNA B Yellowtail ascites virus- NC_004176 vertebrates 1 Birnaviridae,Aquabirnavirus,Yellowtail ascites seg. AY129663 YT-01A virus RNA B Yoka poxvirus NC_015960 vertebrates 1 Poxviridae,Orthopoxvirus,Yoka poxvirus — HQ849551 Zalophus californianus NC_015325 vertebrates 1 Papillomaviridae,Zalophus californianus — HQ293213 papillomavirus 1 papillomavirus 1 Zetapapillomavirus 1 NC_003748 vertebrates 1 Papillomaviridae,Zetapapillomavirus,Zetapapill — AF394740 omavirus 1 Adeno-associated virus-2 NC_001401 vertebrates,human 2 Parvoviridae,Dependovirus,Adeno-associated — AF043303,JQ1901 virus-2 Adeno-associated virus-3 NC_001729 vertebrates,human 1 Parvoviridae,Dependovirus,Adeno-associated — U48704 virus-3 Adeno-associated virus-5 NC_006152 vertebrates,human 2 Parvoviridae,Dependovirus,Adeno-associated — AF085716,Y18065 virus-5 Adeno-associated virus 3B NC_001729 vertebrates,human 1 Parvoviridae,Dependovirus,Adeno-associated — AF028705 virus-3 Adeno-associated virus- NC_006152 vertebrates,human 1 Parvoviridae,Dependovirus,Adeno-associated — DQ335246 Go,1 virus-5 Adult diarrheal rotavirus NC_007548 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 1 DQ113897 strain J19 Adult diarrheal rotavirus NC_007549 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 2 DQ113898 strain J19 Adult diarrheal rotavirus NC_007550 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 4 DQ113899 strain J19 Adult diarrheal rotavirus NC_007551 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 3 DQ113900 strain J19 Adult diarrheal rotavirus NC_007552 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 5 DQ113901 strain J19 Adult diarrheal rotavirus NC_007553 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 6 DQ113902 strain J19 Adult diarrheal rotavirus NC_007554 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 8 DQ113903 strain J19 Adult diarrheal rotavirus NC_007555 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 7 DQ113904 strain J19 Adult diarrheal rotavirus NC_007556 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. 9 DQ113905 strain J19 Adult diarrheal rotavirus NC_007557 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. DQ113906 strain J19 10 Adult diarrheal rotavirus NC_007558 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus H seg. DQ113907 strain J19 11 Allpahuayo virus NC_010249 vertebrates,human 1 Arenaviridae,Arenavirus,Allpahuayo virus seg. L AY216502 Allpahuayo virus NC_010253 vertebrates,human 3 Arenaviridae,Arenavirus,Allpahuayo virus seg. S AY012686,AY081210 ,AY012687 Alpaca respiratory NC_002645 vertebrates,human 1 Coronaviridae,Alphacoronavirus,Human — JQ410000 coronavirus coronavirus 229E Amapari virus NC_010247 vertebrates,human 2 Arenaviridae,Arenavirus,Amapari virus seg. S AF485256,AF512834 Amapari virus NC_010251 vertebrates,human 2 Arenaviridae,Arenavirus,Amapari virus seg. L AY924389,AY216517 Andes virus NC_003466 vertebrates,human 5 Bunyaviridae,Hantavirus,Andes virus seg. S AF291702,AF004660, AF324902,AY228237, AF325966 Andes virus NC_003467 vertebrates,human 3 Bunyaviridae,Hantavirus,Andes virus seg. M AF291703,AF324901, AY228238 Andes virus NC_003468 vertebrates,human 2 Bunyaviridae,Hantavirus,Andes virus seg. L AY228239,AF291704 Araraquara-like virus strain NC_003466 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. S EF571895 P5/Cajuru Aravan virus NC_020808 vertebrates,human 1 Rhabdoviridae,Lyssavirus,Aravan virus — EF614259 Arenavirus AV 96010025 NC_010700 vertebrates,human 1 Arenaviridae,Arenavirus,Whitewater Arroyo seg. S EU486820 virus Arenavirus HQ380005 NC_010700 vertebrates,human 1 Arenaviridae,Arenavirus,Whitewater Arroyo seg. S EU910959 virus Australian bat lyssavirus NC_003243 vertebrates,human 2 Rhabdoviridae,Lyssavirus,Australian bat — AF418014,AF081020 lyssavirus Avian hepatitis E virus NC_023425 vertebrates,human 3 Hepeviridae,Avian hepatitis E virus — AM943646,AY535004 ,KC454286 Avian metapneumovirus NC_007652 vertebrates,human 10 Paramyxoviridae,Metapneumovirus,Avian — DQ009484,EF199772 metapneumovirus ,AY640317,JF424833 ,DQ666911,AB54842 8,EF199771,AY59068 8,FJ977568,AY57978 0 Avian paramyxovirus 4 NC_019531 vertebrates,human 5 Paramyxoviridae,Avulavirus,Avian — JX987283,EU877976, paramyxovirus 4 FJ177514,JN571485, JX133079 Avian paramyxovirus 6 NC_003043 vertebrates,human 7 Paramyxoviridae,Avulavirus,Avian — EU622637,JX522537, paramyxovirus 6 KF267717,AY029299, AB759118,EF569970, GQ406232 Avian rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 AY277923 Avian rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 DQ096805 Avian rotavirus CH2 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EF687020 Avian rotavirus P0-13 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 AB009630 Avian rotavirus P0-13 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 AB009629 Avian rotavirus P0-13 NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 AB009631 BK polyomavirus NC_001538 vertebrates,human 282 Polyomaviridae,Polyomavirus,BK — KF055891,AB211388, polyomavirus AB269835,AB269836 ,AB263928,AB29894 1,AB464960,AB4649 63,JN192434,V01108 ,AB263918,AB26986 4,AB301093,AB2179 18,AB464955,AB365 166,JN192439,JN192 431,AB263925,AB26 3912,AB369091,AB3 65164,AY628237,AB 263926,FR720317,A B485697,AB464957, AB269868,FR720309 ,AB263938,AB26982 3,AB269840,AB2698 31,V01109,AB365163 ,FR720314,AB30109 5,AB369089,AB4856 96,AB269852,AB269 834,FR720312,AB26 9863,AB263934,FR7 20321,AB298944,AB 211371,AB211391,A B298945,FR720322, AB263922,AB269847 ,AB365158,AB36516 1,AB269827,AB3651 48,JN192438,AY6282 29,AB365139,AB301 087,AB263916,AB26 3920,M23122,AY628 235,AB365135,AY62 8233,AB217920,AB2 69855,AB485706,AB 269851,KF055892,AB 365171,AB365175,A B485709,AB369096, AY628225,AB269866 ,AB365151,AB26984 1,AB485707,AB2698 25,AB211387,AB365 132,AB269832,AY62 8231,AB260029,AB2 69848,AB365170,AB 365130,AB269844,A B269830,AB485712, AB269856,AB269853 ,AB301089,AB26984 5,AB365136,AB3651 55,AB301102,AB263 914,AB485703,JN192 432,FR720318,AB26 9861,AB365174,AB2 63933,AB301091,AB 269865,AB365134,A B301097,AB213487, AB301099,AB369094 ,AY628226,AB36909 3,AB217917,AB3651 69,AB269837,AB365 146,AY628227,JQ713 822,EF376992,AB260 033,AB263936,AB21 1373,AB211389,AB4 64958,AB464953,AB 365137,AB269839,A B211390,AB485698,J N192437,AB260031, AB365167,AB269842 ,FR720319,AB36516 8,AB269829,AB2639 17,AB365159,FR720 320,AB301086,AB26 3937,AB365176,JN19 2440,AB269849,AB2 69838,AB211370,AB 263919,AB365172,A B365144,AB260028, AB485708,JN192435, AB298947,AB269824 ,AB269857,AB26984 3,AB269846,AB3651 33,AB211381,AB365 156,AY628234,AB36 9098,AB211385,AB2 63935,AB369100,AB 365177,FR720323,A B301100,AB464962, AB365157,AB485705 ,AB485711,AB26986 7,FR720311,KF05589 3,AB365141,AB2113 77,AB365173,AB485 701,AB260030,AB48 5700,AB211375,AB3 65140,AB217919,AB 301092,AB369095,A B369087,AB263927, AB211374,AB464956 ,AB301103,AB36516 5,AB269833,AB3651 38,AY628230,AB269 860,AB485699,AB21 1376,AB365147,AB3 69092,AB464954,AB 269826,AB365143,A B365145,FR720310, AB369090,AB263924 ,AB369101,AB30110 1,AY628238,AB2639 13,AB485702,AB298 946,AB365154,AB26 3930,AB301088,AB3 69088,AB365150,AB 464961,AB260032,A B365149,AB211379, AY628228,AY628224 ,AB298940,AB26985 9,AB301098,AB3690 97,AB485710,AB211 382,AB269858,DQ30 5492,AB485695,AB2 63921,AB301094,JN1 92433,AB263932,AB 369099,AB365153,A B365131,FR720316, AB301090,AB211372 ,AB211386,AB29894 3,AB365160,AB3651 42,AB263931,AB485 704,AB269862,FR72 0313,AB217921,AB2 69828,AB269854,AB 485694,AB269850,JN 192436,FR720315,JN 192441,AB269822,A B365152,AB298942, AB263915,AB263923 ,AB269869,AB36516 2,AB365178,AY6282 36,AB260034,AB211 383,FR720308,AB21 1384,AY628232,AB2 11378,AB211380,AB 211369,AB464959,A B263929,AB301096 Baboon enterovirus NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AF326750 Bat Coy 273/2005 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ648856 respiratory syndrome-related coronavirus Bat Coy 279/2005 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ648857 respiratory syndrome-related coronavirus Bat Hepatitis B virus NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — KC790377 B virus Bat SARS Coy Rf1/2004 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ412042 respiratory syndrome-related coronavirus Bat SARS Coy Rm1/2004 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ412043 respiratory syndrome-related coronavirus Bat SARS Coy Rp3/2004 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ071615 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153545 HKU3-10 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153546 HKU3-11 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153547 HKU3-12 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153548 HKU3-13 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ084199 HKU3-2 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ084200 HKU3-3 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153539 HKU3-4 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153540 HKU3-5 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153541 HKU3-6 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153542 HKU3-7 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153543 HKU3-8 respiratory syndrome-related coronavirus Bat SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — GQ153544 HKU3-9 respiratory syndrome-related coronavirus Bat SARS-like coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — KC881006 Rs3367 respiratory syndrome-related coronavirus Bat SARS-like coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — KC881005 RsSHC014 respiratory syndrome-related coronavirus Bat SARS-like coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — KF367457 WIV1 respiratory syndrome-related coronavirus Bat coronavirus HKU3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ022305 respiratory syndrome-related coronavirus Bat hepevirus NC_018382 vertebrates,human 1 Hepeviridae,Bat hepevirus — JQ001749 Bat sapovirus TLC58/HK NC_017936 vertebrates,human 1 Caliciviridae,Sapovirus,Bat sapovirus — JN899075 TLC58/HK Bear Canyon virus NC_010255 vertebrates,human 2 Arenaviridae,Arenavirus,Bear Canyon virus seg. L AY924390,AY216503 Bear Canyon virus NC_010256 vertebrates,human 3 Arenaviridae,Arenavirus,Bear Canyon virus seg. S AF512833,AY924392, AY924391 Beilong virus NC_007803 vertebrates,human 1 Paramyxoviridae,Beilong virus — DQ100461 Bermejo virus NC_003466 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. S AF482713 Blue River virus NC_005215 vertebrates,human 2 Bunyaviridae,Hantavirus,Sin Nombre virus seg. M AF030551,AF030552 Borna disease virus NC_001607 vertebrates,human 13 Bornaviridae,Bornavirus,Borna disease virus — AJ311522,AB032031, AJ311523,AY114162, AB258389,AB246670 ,AY114161,L27077,E U781967,U04608,AJ3 11521,AY114163,AJ3 11524 Bovine group C rotavirus NC_007570 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 5 AB108680 Bovine group C rotavirus NC_007571 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus C seg. 8 AB108681,U31750 Bovine group C rotavirus NC_007574 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 4 U26552 Bovine parainfluenza virus NC_002161 vertebrates,human 11 Paramyxoviridae,Respirovirus,Bovine — EU277658,JQ063064 3 parainfluenza virus 3 ,AXQ73601,AB77048 4,HQ530153,AF1786 55,JX969001,D84095 ,AXQ73600,AF178654 ,AB770485 Bovine respiratory syncytial NC_001989 vertebrates,human 1 Paramyxoviridae,Pneumovirus,Bovine — AF092942 virus respiratory syncytial virus Bovine respiratory syncytial NC_001989 vertebrates,human 1 Paramyxoviridae,Pneumovirus,Bovine — AF295543 virus ATCC51908 respiratory syncytial virus Bovine rotavirus NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM363560 Bovine rotavirus NC_011501 vertebrates,human 42 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ206164,EU542719, HM363562,EU54271 6,K02170,FJ206188, EU542714,EU542715 ,FJ206180,FJ206176, EU542718,FJ206174, FJ206181,FJ206184, DQ494403,EU542717 ,FJ206189,FJ206172, FJ206165,FJ206179, FJ206166,FJ206192, FJ206185,FJ206178, DQ494404,FJ206182, FJ206171,FJ206191, FJ206167,FJ206190, FJ206186,FJ206175, FJ206187,FJ206173, FJ206226,FJ206168, FJ206183,JX971577, FJ206193,FJ206169, FJ206170,FJ206177 Bovine rotavirus NC_011502 vertebrates,human 41 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU542713,FJ206158, FJ206139,DQ494402, FJ206120,FJ206133, FJ206148,FJ206116, EU542711,FJ206136, HM363561,FJ206118 ,FJ206146,FJ206143, EU542708,FJ206138, FJ206130,FJ206131, FJ206152,FJ206110, FJ206122,FJ206123, FJ206126,FJ206157, FJ206108,FJ206134, JX971576,FJ206128, FJ206141,FJ206114, FJ206125,EU542712, FJ206150,EU542709, FJ206155,EU542710, DQ494401,FJ206154, FJ206160,FJ206145, FJ206112 Bovine rotavirus NC_011503 vertebrates,human 49 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ206037,FJ217204, FJ206039,EU873014, FJ206073,FJ206082, GQ352366,FJ217205 ,FJ206047,EU143711 ,HQ199897,AB07705 4,FJ206057,FJ20606 8,FJ206079,FJ20605 8,AB077056,FJ20607 7,HM591496,HM2355 10,GQ352364,U5033 2,FJ206055,FJ20608 7,GQ352362,JX9715 74,AB077058,EU873 015,FJ206048,FJ206 072,FJ206085,FJ545 658,DQ494393,X526 50,AB077053,FJ2060 84,EU828784,EU873 013,FJ206088,FJ206 044,DQ494394,AB07 7055,FJ206049,FJ20 6070,AB077057,FJ20 6041,FJ206064,FJ20 6080,FJ206075 Bovine rotavirus NC_011504 vertebrates,human 51 Reoviridae,Rotavirus,Rotavirus A seg. EU542721,FJ206109, 10 FJ206137,JX971578, FJ206147,AF166354, FJ206117,EU542722, FJ206113,FJ206140, FJ206111,FJ206144, EU542723,DQ494398 ,EU873006,DQ49439 7,FJ206135,EU82878 6,EU542720,FJ20612 7,FJ206151,FJ20610 7,AF166353,FJ20610 1,FJ206103,HM5914 94,FJ206129,EU5427 25,FJ206162,HM363 563,FJ206156,FJ206 115,FJ206132,EU542 724,FJ206161,EU873 007,FJ206119,FJ206 105,FJ206142,HM59 1492,FJ206121,EU87 3008,FJ206124,FJ20 6149,FJ206106,FJ20 6163,HM591493,FJ2 06159,FJ206153,FJ9 72713,FJ206104 Bovine rotavirus NC_011505 vertebrates,human 41 Reoviridae,Rotavirus,Rotavirus A seg. FJ206045,FJ206050, 11 FJ206076,FJ206054, FJ206071,FJ206061, FJ206052,FJ206078, EU542729,EU542731 ,FJ206091,FJ206046, EU542730,FJ206099, FJ206059,FJ206083, HM363564,FJ206096 ,FJ206093,FJ206067, DQ494399,FJ206069, FJ206074,FJ206081, FJ206056,FJ206090, FJ206060,DQ494400, FJ206065,EU542727, FJ206092,EU542726, FJ206089,FJ206100, FJ206097,FJ206086, FJ206063,FJ206094, FJ206098,JX971579, EU542728 Bovine rotavirus NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 X52589,JX971570 Bovine rotavirus NC_011507 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX971569,X55444,JQ 4346 Bovine rotavirus NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX971571 Bovine rotavirus NC_011509 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU873010,EU873011 ,EU873012,K02254,J X971573 Bovine rotavirus NC_011510 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX971572,EU873009 Bovine rotavirus A NC_011500 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF693063,JF693041, JF693030 Bovine rotavirus A NC_011501 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF693065,AB513838, JF693043 Bovine rotavirus A NC_011502 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF693066,JF693044 Bovine rotavirus A NC_011503 vertebrates,human 26 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX470523,JF720877, JF742652,AB513837, JF693045,JF720878, JX470522,JX470514, JX470516,EF200563, AB454421,JF693067, EF200560,JX470519, EF200549,JF689835, JX470518,EF199501, GU144587,JX470515 ,JX470521,JX470517, JF720882,JX470520, AB486011,DQ487203 Bovine rotavirus A NC_011504 vertebrates,human 11 Reoviridae,Rotavirus,Rotavirus A seg. JF693046,EF200578, 10 GU181282,EF200575 ,EF200574,AY293829 ,EF200576,EF200573 ,EF592592,JF693068 ,EF200572 Bovine rotavirus A NC_011505 vertebrates,human 7 Reoviridae,Rotavirus,Rotavirus A seg. JF693047,EF200582, 11 JF693069,EF200580, GU937876,EF200581 ,EF200579 Bovine rotavirus A NC_011506 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF693060,JF693027, JF693038 Bovine rotavirus A NC_011507 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF693059,JF693037, JF693026 Bovine rotavirus A NC_011508 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 3 AY300923,JF693061, JF693039,JF693028 Bovine rotavirus A NC_011509 vertebrates,human 11 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF720875,EF200569, JF693064,JF720873, JF742649,EF200568, JF693042,JF720879, EF200565,JF742650, EF200567 Bovine rotavirus A NC_011510 vertebrates,human 7 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF693040,JF693029, AB513836,DQ838596 ,AB454420,AB48601 0,JF693062 Bovine rotavirus B-11 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AY047488 Bovine rotavirus G10 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AY527227 10 Bovine rotavirus G15P11 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU682404 11 Bovine rotavirus G15P21 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AY527226 10 Bovine rotavirus G6 NC_011501 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 7 AB748598,AB748600 ,AB748597,AB74859 9 Bovine rotavirus G6 NC_011502 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 8 AB748594,AB748595 ,AB748592,AB74859 3 Bovine rotavirus G6 NC_011504 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. AB748604,AB748603 10 ,AB748605,AB74860 2 Bovine rotavirus strain NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF144804 BRV033 10 Bovine rotavirus strain RF NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AY116593 10 Bovine rotavirus strain RF NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 AY116592 Buffalo rotavirus A 10733 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY281360 Buffalo rotavirus A 10733 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU659853 11 Bundibugyo ebolavirus NC_014373 vertebrates,human 5 Filoviridae,Ebolavirus,Bundibugyo ebolavirus — KC545394,KC545393 ,KC545396,FJ217161 ,KC545395 CAS virus NC_018481 vertebrates,human 1 Arenaviridae,CAS virus seg. S JQ71 7262 CAS virus NC_018484 vertebrates,human 1 Arenaviridae,CAS virus seg. L JQ717261 Camberwell virus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AF145896 Canine distemper virus NC_001921 vertebrates,human 43 Paramyxoviridae,Morbillivirus,Canine — AB490680,AB475099 distemper virus ,EU726268,AB82370 7,AB490672,AB6877 21,AB490674,AX453 976,AB753775,AY46 6011,KF914669,AF01 4953,EU716337,AF3 05419,AB476401,AB 475097,AB490676,A Y386316,JN896331,A B462810,AF164967,A B823706,AB490678, AB476402,AB490681 ,GU138403,AY44335 0,AX453975,AB4906 70,AY386315,AY649 446,AB490679,AY44 5077,HM852904,AY5 42312,AX453977,HM 063009,HM046486,A B753776,AB474397,J N896987,AB687720, KC427278 Canine distemper virus NC_001921 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Canine — AF378705 strain Onderstepoort distemper virus Canine rotavirus A79- NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 EU708940 10/G3P[3] Canine rotavirus A79- NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 EU708941 10/G3P[3] Canine rotavirus A79- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU708942 10/G3P[3] Canine rotavirus A79- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU708939 10/G3P[3] Canine rotavirus A79- NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708943 10/G3P[3] 10 Canine rotavirus A79- NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708944 10/G3P[3] 11 Canine rotavirus A79- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 EU708935 10/G3P[3] Canine rotavirus A79- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 EU708934 10/G3P[3] Canine rotavirus A79- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 EU708936 10/G3P[3] Canine rotavirus A79- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU708938 10/G3P[3] Canine rotavirus A79- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU708937 10/G3P[3] Canine rotavirus CU-1 NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 EU708918 Canine rotavirus CU-1 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 EU708919 Canine rotavirus CU-1 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU708920 Canine rotavirus CU-1 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU708917 Canine rotavirus CU-1 NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. AF144806,EU708921 10 Canine rotavirus CU-1 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708922 11 Canine rotavirus CU-1 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 EU708913 Canine rotavirus CU-1 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 EU708912 Canine rotavirus CU-1 NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 EU708914 Canine rotavirus CU-1 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU708916 Canine rotavirus CU-1 NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU708915,D13401,L 20876 Canine rotavirus K9 NC_011500 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 5 AF111946,EU708929 Canine rotavirus K9 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 EU708930 Canine rotavirus K9 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU708931 Canine rotavirus K9 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU708928 Canine rotavirus K9 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708932 10 Canine rotavirus K9 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708933 11 Canine rotavirus K9 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 EU708924 Canine rotavirus K9 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 EU708923 Canine rotavirus K9 NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 EU708925 Canine rotavirus K9 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU708927 Canine rotavirus K9 NC_011510 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU708926,D13400 Canine rotavirus RV198/95 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF271089 Canine rotavirus RV52/96 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF271090 Caprine rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 GU937883 Caprine rotavirus A NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 JQ004978,GU937885 Caprine rotavirus A NC_011502 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 8 GU937884,JQ004977 Caprine rotavirus A NC_011503 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 9 GU937882,GU93788 9,GU937891,JQ0049 75,AY128708 Caprine rotavirus A NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. GU937886,JQ004979 10 Caprine rotavirus A NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JQ004980,GU937887 11 Caprine rotavirus A NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 JQ004971,GU937878 Caprine rotavirus A NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 JQ004970,GU937877 Caprine rotavirus A NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 JQ004972,GU937879 Caprine rotavirus A NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 GU937881,JQ004974 Caprine rotavirus A NC_011510 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 4 GU937880,JQ004973 Chandipura virus NC_020805 vertebrates,human 2 Rhabdoviridae,Vesiculovirus,Chandipura virus — GU212858,GU21285 6 Chandipura virus Dak AR D NC_020805 vertebrates,human 1 Rhabdoviridae,Vesiculovirus,Chandipura virus — HM627187 111125 Chandipura virus IB An NC_020805 vertebrates,human 1 Rhabdoviridae,Vesiculovirus,Chandipura virus — HM627186 9978 Chapare virus NC_010562 vertebrates,human 1 Arenaviridae,Arenavirus,Chapare virus seg. S EU260463 Chapare virus NC_010563 vertebrates,human 1 Arenaviridae,Arenavirus,Chapare virus seg. L EU260464 Chiba virus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB042808 Civet SARS Coy 007/2004 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY572034 respiratory syndrome-related coronavirus Civet SARS Coy NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY304488 SZ16/2003 respiratory syndrome-related coronavirus Civet SARS Coy SZ3/2003 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY304486 respiratory syndrome-related coronavirus Colobus guereza NC_015692 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Colobus — GU014533 papillomavirus type 2 monkey papillomavirus Convict Creek 107 virus NC_005215 vertebrates,human 2 Bunyaviridae,Hantavirus,Sin Nombre virus seg. M L33684,L33474 Convict Creek 107 virus NC_005216 vertebrates,human 2 Bunyaviridae,Hantavirus,Sin Nombre virus seg. S U47135,L33816 Convict Creek 107 virus NC_005217 vertebrates,human 1 Bunyaviridae,Hantavirus,Sin Nombre virus seg. L AF425256 Cote d'Ivoire ebolavirus NC_014372 vertebrates,human 1 Filoviridae,Ebolavirus,Tai Forest ebolavirus — FJ217162 Coxsackievirus A16 NC_001612 vertebrates,human 22 Picornaviridae,Enterovirus,Enterovirus A — KC755235,KF193630 ,KF193622,KF193629 ,KC755234,KC75522 8,KF193628,KF19362 0,KC755232,KF1936 24,KF193625,KC755 230,KF193621,KF193 631,KC755233,KC75 5229,KF193632,KC5 07895,KF193623,KC 755231,KF193627,KF 193626 Coxsackievirus A2 NC_001612 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus A — JX867332,JX867331, JX867333,JX867330 Coxsackievirus A24 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — KF725085 Coxsackievirus A7 NC_001612 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus A — GU942820,GU94282 3,GU942821,GU9428 22 Cupixi virus NC_010252 vertebrates,human 1 Arenaviridae,Arenavirus,Cupixi virus seg. L AY216519 Cupixi virus NC_010254 vertebrates,human 1 Arenaviridae,Arenavirus,Cupixi virus seg. S AF512832 Cutthroat trout virus NC_015521 vertebrates,human 1 Hepeviridae,Cutthroat trout virus — HQ731075 Dobrava-Belgrade virus NC_005233 vertebrates,human 15 Bunyaviridae,Hantavirus,Dobrava-Belgrade seg. S AY961615,AY533120 virus ,AY961618,AY53311 8,AJQ09775,JQ02620 4,AJQ09773,AJ41061 5,AF442622,AJ13167 3,JF920150,AY16857 6,AJ131672, L41916, AJ410619 Dobrava-Belgrade virus NC_005234 vertebrates,human 8 Bunyaviridae,Hantavirus,Dobrava-Belgrade seg. M AY961616,AY168577 virus ,AJQ09774,AY168578 ,JQ026205,JF920149 ,AJ410616, L33685 Dobrava-Belgrade virus NC_005235 vertebrates,human 3 Bunyaviridae,Hantavirus,Dobrava-Belgrade seg. L AJ410617,JQ026206, virus JF920148 Dolphin morbillivirus NC_005283 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Cetacean — AJ608288 morbillivirus Duvenhage virus NC_020810 vertebrates,human 4 Rhabdoviridae,Lyssavirus,Duvenhage virus — EU293120,EU293119 ,EU623444,JN986749 Ebola virus-Mayinga, NC_002549 vertebrates,human 1 Filoviridae,Ebolavirus,Zaire ebolavirus — AF086833 Zaire, 1976 Echovirus 1 (strain Faroukl NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AF029859 ATCC VR-1038) Echovirus 9 (strain Barty) NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — X92886 Echovirus 9 (strain Hill) NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — X84981 Echovirus E25 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — JX976772 Echovirus E30 NC_001472 vertebrates,human 6 Picornaviridae,Enterovirus,Enterovirus B — KC897073,JX854435, JX976773,EF066392, EF066391,AY948442 Echovirus E6 NC_001472 vertebrates,human 9 Picornaviridae,Enterovirus,Enterovirus B — JQ929657,JX976771, KF042343,AB705309, KF042342,AB705311, AB705308,AB705310 ,JQ801 739 Echovirus E9 NC_001472 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus B — KC238668,JN596587, KC238669,KC238667 Enterovirus NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AF352027 5666/5in/002209 Enterovirus NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AF316321 5865/5in/000009 Enterovirus A NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — U05876 Enterovirus A71 NC_001612 vertebrates,human 28 Picornaviridae,Enterovirus,Enterovirus A — AB747374,AB747373 ,KC296444,KF13448 6,KF142412,KF31245 7,KC296445,KF1424 11,KF142413,AB7473 75,KC436270,KF668 443,KC954664,KF15 4355,KC954662,KC4 36271,KC436268,KC 436272,KC570452,K C436269,KC296443, KC436266,KC954663 ,KC570453,KC43626 7,KC436265,JQ5147 85,KF501389 Enterovirus B NC_001472 vertebrates,human 5 Picornaviridae,Enterovirus,Enterovirus B — KC568448,KC568449 ,KC568447,KC56844 6,M16560 Enterovirus B87 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — KC292019 Enterovirus B97 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — GU550508 Enterovirus CA55-1988 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AF241359 Enterovirus Yanbian 96- NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AF230973 83csf Equine rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JXQ36371 Equine rotavirus A NC_011501 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus A seg. 7 KC815700,JXQ36373, JQ309143,KC815677 ,KC815688,KC81566 6 Equine rotavirus A NC_011502 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus A seg. 8 JQ309142,KC815665 ,KC815687,KC81567 6,JXQ36372,KC81569 9 Equine rotavirus A NC_011503 vertebrates,human 14 Reoviridae,Rotavirus,Rotavirus A seg. 9 KC815674,AB595975 ,AY750925,AB59597 6,AB595979,AB5959 78,AB595977,L49042 ,JXQ36370,L49043,A B595974,AY750924, KC815685,KC815663 Equine rotavirus A NC_011504 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. KC815689,KC815667 10 ,JXQ36374,KC815701 ,KC815678 Equine rotavirus A NC_011505 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. KC815668,JXQ36375, 11 JQ309144 Equine rotavirus A NC_011506 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus A seg. 2 KC815681,JXQ36366, JQ309139,KC815695 ,KC815659,KC81567 0 Equine rotavirus A NC_011507 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus A seg. 1 KC815680,JQ309138 ,KC815694,KC81566 9,KC815658,JXQ3636 5 Equine rotavirus A NC_011508 vertebrates,human 7 Reoviridae,Rotavirus,Rotavirus A seg. 3 KC815696,JXQ36367, KC815660,KC815671 ,KC815682,JQ30914 0,AY277922 Equine rotavirus A NC_011509 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 6 KC815697,KC815662 ,JXQ36369,KC815673 ,KC815684 Equine rotavirus A NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 KC815672,KC815661 ,KC815683 European bat lyssavirus 1 NC_009527 vertebrates,human 8 Rhabdoviridae,Lyssavirus,European bat — KF042301,EU626551 lyssavirus 1 ,KF042302,EF157976 ,EU293112,KF15500 3,EU626552,EU2931 09 European bat lyssavirus 2 NC_009528 vertebrates,human 3 Rhabdoviridae,Lyssavirus,European bat — KF155004,EF157977, lyssavirus 2 EU293114 Fer-de-lance virus NC_005084 vertebrates,human 1 Paramyxoviridae,Ferlavirus,Fer-de-Lance — AY141760 paramyxovirus Ferret hepatitis E virus NC_001434 vertebrates,human 2 Hepeviridae,Hepevirus,Hepatitis E virus — JN998606,JN998607 Flexal virus NC_010757 vertebrates,human 2 Arenaviridae,Arenavirus,Flexal virus seg. S AF512831,AF485257 Flexal virus NC_010759 vertebrates,human 1 Arenaviridae,Arenavirus,Flexal virus seg. L EU627611 GB virus C NC_001710 vertebrates,human 48 Flaviviridae,Pegivirus,GB virus C — KC618398,AB013500 ,JN127373,D87710,A Y949771,U45966,D8 7712,AF031828,U444 02,D87263,AB003293 ,U75356,D90600,AF0 06500,AB008335,D87 711,AF121950,U3638 0,HQ331233,AB0135 01,AB003289,AB0O8 342,D87708,AF08178 2,KC618399,AB0186 67,AB008336,KC618 401,AF031827,AF031 829,AF104403,AB003 288,U63715,HQ3312 35,AB003292,D87255 ,D87715,KC618400,U 94695,D90601 ,D8771 3,AB003290,D87262, HQ331234,AB021287 ,D87714,D87709,AY1 96904 GB virus C variant NC_001710 vertebrates,human 1 Flaviviridae,Pegivirus,GB virus C — AF070476 troglodytes Giant panda rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 GU188281 Giant panda rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. GU188282 10 Giant panda rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. GU329526 11 Giant panda rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HQ641294 Golden Gate virus NC_018482 vertebrates,human 1 Arenaviridae,Golden Gate virus seg. L JQ717263 Golden Gate virus NC_018483 vertebrates,human 1 Arenaviridae,Golden Gate virus seg. S JQ717264 Goose paramyxovirus NC_005036 vertebrates,human 1 Paramyxoviridae,Avulavirus,Goose AF473851 SF02 paramyxovirus SF02 Guanarito virus NC_005077 vertebrates,human 3 Arenaviridae,Arenavirus,Guanarito virus seg. S AY129247,AY497548 ,AF485258 Guanarito virus NC_005082 vertebrates,human 2 Arenaviridae,Arenavirus,Guanarito virus seg. L AY216504,AY358024 HBV genotype A NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AP007263 B virus HBV genotype Al NC_003977 vertebrates,human 6 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HE974375,HE974381 B virus ,HE974370,HE97436 3,HE974365,HE9743 62 HBV genotype A2 NC_003977 vertebrates,human 6 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HE974383,HE974364 B virus ,HE974371,HE97437 4,HE974376,HE9743 67 HBV genotype B NC_003977 vertebrates,human 3 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AB602818,AB554017 B virus ,AB540582 HBV genotype C NC_003977 vertebrates,human 19 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AB554020,AB540585 B virus ,AB644286,AB64428 7,AB644280,AB5540 21,AB644281,AB560 662,AB644284,AB55 4014,AB560661,AB5 54019,AB644283,AB 554025,AB540584,A B554022,AB554015, AB540583,AB554018 HBV genotype D NC_003977 vertebrates,human 4 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HE815465,AB554016 B virus ,AB554024,AB55402 3 HBV genotype D3 NC_003977 vertebrates,human 2 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HE974377,HE974379 B virus HBV genotype D4 NC_003977 vertebrates,human 4 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HE974372,HE974378 B virus ,HE974373,HE97438 2 HBV genotype E NC_003977 vertebrates,human 3 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HE974384,HE974380 B virus ,AP007262 HBV genotype F2 NC_003977 vertebrates,human 2 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HE974366,HE974369 B virus HBV genotype F4 NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HE974368 B virus HBV genotype G NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AP007264 B virus HBV genotype H NC_003977 vertebrates,human 6 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AB516393,AB516395 B virus ,AP007261,AB51639 4,AB846650,AB2983 62 HBV recombinant B/C NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AB644282 B virus HBV recombinant C/G NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AB644285 B virus HIV-1 CRF03_AB NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — AF193276 immunodeficiency virus 1 HIV-1 CRF04_cpx NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — AF049337 immunodeficiency virus 1 HIV-1 M_02CD,KS069 NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — FM877780 immunodeficiency virus 1 HIV-1 M_02CD,LBTB032 NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — FM877779 immunodeficiency virus 1 HIV-1 M_02CD,LBTB084 NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — FM877781 immunodeficiency virus 1 HIV-1 M_02CD,MBTB047 NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — FM877782 immunodeficiency virus 1 HIV-1 M_97CD,KFE267 NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — FM877778 immunodeficiency virus 1 HIV-1 M_97CD,KTB119 NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — FM877777 immunodeficiency virus 1 HIV-1 M_97CD,MBFE250 NC_001802 vertebrates,human 1 Retroviridae,Lentivirus,Human — FM877783 immunodeficiency virus 1 Hantaan virus NC_005218 vertebrates,human 25 Bunyaviridae,Hantavirus,Hantaan virus seg. S AF427322,AF427324, JQ665905,AY748309, AF321094,D25533,A Y017064,U37768,M1 4626,EF595840,HQ6 11981,AF427318,AB6 20031,JQ665906,AF4 27320,AB127998,D25 530,AF427319,AB027 111,AB027097,AF321 095,AB027101,DQ65 8415,AF427323,AY83 9871 Hantaan virus NC_005219 vertebrates,human 16 Bunyaviridae,Hantavirus,Hantaan virus seg. M JQ665881,AB027115, EU074224,AB127995 ,AB030232,AB62003 2,U37729,D25532,Y0 0386,L08753,EU0746 72,U38177,AF345636 ,M14627,D25529,JQ6 65882 Hantaan virus NC_005222 vertebrates,human 6 Bunyaviridae,Hantavirus,Hantaan virus seg. L D25528,AB620033,D 25531,X55901,DQ98 9237,AF336826 Hantaan virus 84FLi NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S AF366568 Hantaan virus 84FLi NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M AF366569 Hantaan virus A16 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S AF288646 Hantaan virus A16 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M AF288645 Hantaan virus A9 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M AF035831 Hantaan virus CA09082007 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834499 Hantaan virus CA10081109 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834500 Hantaan virus CA10081113 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834501 Hantaan virus CA10081203 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834502 Hantaan virus CA10081206 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834503 Hantaan virus CA10081708 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834504 Hantaan virus CA10081905 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834505 Hantaan virus E142 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S AF288644 Hantaan virus H10150 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834506 Hantaan virus Lee NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M DQ0377 Hantaan virus N8 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF077656 Hantaan virus P09072 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S HQ834507 Hantaan virus 032 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M DQ371905 Hantaan virus 032 NC_005222 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. L DQ371906 Hantaanvirus CGAa1011 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990913 Hantaanvirus CGAa1011 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990927 Hantaanvirus CGAa1015 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990912 Hantaanvirus CGAa1015 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990926 Hantaanvirus CGAa2 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EU092219 Hantaanvirus CGAa2 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EU092223 Hantaanvirus CGAa31MP7 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990911 Hantaanvirus CGAa31MP7 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990925 Hantaanvirus CGAa31P9 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990910 Hantaanvirus CGAa31P9 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990924 Hantaanvirus CGAa4MP9 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990915 Hantaanvirus CGAa4MP9 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990929 Hantaanvirus CGAa4P15 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990914 Hantaanvirus CGAa4P15 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990928 Hantaanvirus CGAa75 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EU092220 Hantaanvirus CGAa75 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EU092224 Hantaanvirus CGHu1 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EU092218 Hantaanvirus CGHu1 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EU092222 Hantaanvirus CGHu3612 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990909 Hantaanvirus CGHu3612 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990923 Hantaanvirus CGHu3614 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990908 Hantaanvirus CGHu3614 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990922 Hantaanvirus CGRn45 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EU092221 Hantaanvirus CGRn45 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EU092225 Hantaanvirus CGRn53 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990907 Hantaanvirus CGRn53 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990921 Hantaanvirus CGRn5310 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990906 Hantaanvirus CGRn5310 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990920 Hantaanvirus CGRn93MP8 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990905 Hantaanvirus CGRn93MP8 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990919 Hantaanvirus CGRn93P8 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF990904 Hantaanvirus CGRn93P8 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF990918 Hantavirus CJAp93 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S EF208929 Hantavirus CJAp93 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M EF208930 Hantavirus Gou3-v9 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288651 Hantavirus LR1 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S AF288294 Hantavirus LR1 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M AF288293 Hantavirus LR1 NC_005222 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. L AF288292 Hantavirus RG9 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S AF288296 Hantavirus S85-46 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S AF288659 Hantavirus S85-46 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M AF288658 Hantavirus SN7 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S AF288657 Hantavirus SN7 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M AF288656 Hantavirus Z10 NC_006433 vertebrates,human 2 Bunyaviridae,Hantavirus,Hantavirus Z10 seg. S EF533944,AF184987 Hantavirus Z10 NC_006435 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantavirus Z10 seg. L AF189155 Hantavirus Z10 NC_006437 vertebrates,human 2 Bunyaviridae,Hantavirus,Hantavirus Z10 seg. M AF276987,AF143675 Hantavirus Z37 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF187082 Hantavirus Z37 NC_005237 vertebrates,human 2 Bunyaviridae,Hantavirus,Seoul virus seg. M AF187081,AF190119 Hantavirus Z37 NC_005238 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. L AF285266 Hantavirus strain CJilin93 NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M AY748307 Hantavirus strain YU61 NC_005218 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. S AY748308 Hawaii calicivirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus U07611 Hendra virus NC_001906 vertebrates,human 13 Paramyxoviridae,Henipavirus,Hendra virus — HM044318,HM04432 1,JN255801,HM0443 20,JN255802,JN2558 06,JN255800,HM044 317,JN255805,HM04 4319,JN255803,AF01 7149,JN255804 Hepatitis B virus NC_003977 vertebrates,human 5003 Hepadnaviridae,Orthohepadnavirus,Hepatitis — GQ377610,X59795,J B virus 0040171,JN257172, EU306678,EU916228 ,AB014372,JN040759 ,GU456658,JXQ2687 7,AF418690,AY80039 1,AY738144,AB1959 42,DQ823093,AB205 191,GQ183474,AB33 0372,JN792915,AB01 4389,DQ089760,JN6 42143,AB900109,FJ3 86642,EU306702,JQ 801498,EU306680,H M750150,HQ700441, DQ993702,JN040762 ,AB287317,AB67441 1,GU815656,JX5072 13,AJ627218,KC5106 56,DQ975273,EU939 675,HM750147,FJ34 9240,JF828932,FN59 4754,GQ161801,AF2 23960,JN040772,HM 011478,GU456681,A B036918,FJ562245,G U815755,GU815599, GQ161785,DQ46379 6,GU456648,KC8753 22,EU564825,AJ1315 71,HM011497,FJ787 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,GQ161753,KC875340,GU 815732,DQ089783,AB900 105,AM494706,AY330917, AB493835,AY206379,GQ1 83480,JN827417,FJ56231 2,AB073852,EU916213,AY 596109,FJ349207,AB1160 90,FM209514,AY934771,A Y596112,AB493832,EU93 9545,EU916221,GU81558 8,AB670302,AY311370,AM 494714,AY217371,GQ377 634,AY161147,EU155893, JX507215,AB367801,AF46 1360,EU570069,KF679989 ,GQ475305,AF363963,EU9 19170,HQ833469,JN25719 3,DQ980548,AJ344116,AB 219533,KC875253,AB3678 00,AY721611,KF425556,K C875276,AB246343,DQ47 8890,AB674436,JN664940 ,AF458665,GQ477463,AM 184126,EU594404,FJ9044 11,AB697487,HM585197,E U306722,AF222323,JN257 192,FJ386663,HMO11484, JN664915,GQ377566,AB6 42092,FJ562247,FN59475 7,EU560441,KC875307,AB 300371,FJ692580,EU8720 16,GQ161806,GU815684, AB670303,GQ477502,AB1 95953,GQ377522,AY7381 41,JQ040137,FJ692566,E U859938,FJ386662,FJ904 404,FJ562295,EU306696, HQ603064,FJ386598,AB36 7422,DQ315776,DQ99369 0,JN040769,AY233277,EU 522068,EU306718,AY1670 96,FJ692607,GU456650,A B697501,FJ386611,AB287 325,AB562463,FJ386670, GQ161821,AB014395,AF4 18678,EF494381,AY93477 3,AB205127,HQ700481,FJ 904444,GU332694,AB670 276,AB480038,JQ801510, AB033559,AB195937,DQO 60826,HE981180,FJ38662 1,AB188244,FJQ23663,JN6 42136,GU815561,FJ56230 0,GQ161791,HM750151,E U939666,JF828918,AM494 708,AB365450,DQ993691, EU660224,JF436921,KC51 0647,FR714495,GQ35813 7,JQ429078,AB076679,FJ 023650,EU916210,EU4390 06,KC875256,DQ980547,D 0089798,GQ377615,DQ47 8887,JF754631,JQ801493, AB073857,FJ386679,GQ4 77457,DQ993696,D16665, HM750138,JX429899,DQ9 93700,EU939618,AM4947 15,JQ688404,JF754608,G U815740,JF828928,AF282 918,GQ477500,DQ111986, AB453986,EU158262,FJ58 9065,EU589340,AB073833 ,GU815771,EU306701,EU 871996,AB300363,AB0738 47,GQ161758,FM209516,A Y741795,EU859926,EU93 9561,AB056515,AB674409 ,FJ899763,AB900116,GQ3 77606,EU306727,GQ1834 70,DQ788728,HQ700521, GQ477468,EU306692,JN0 40763,HM627320,GQ3775 14,JN257216,KC875321,G 0475356,FJ787459,AF458 664,AB274977,FJ899771,F J562235,HM363569,JN040 795,AY902777,AY206383, EU660232,U87746,GQ924 609,AF297625,GU815730, HQ700494,FJ692612,AY21 7368,HM011470,EU93967 3,GQ477480,D23682,GQ3 77597,AB288026,JN04077 9,FJ562238,GQ475314,JN 642138,X80925,GQ475310 ,EU939559,GU815614,EU 547561,JXQ26884,GU4566 79,JN664910,FJ386647,FJ 023640,KF061168,AB0738 32,EU919173,GQ161771,H 0603062,AF160501,GQ92 4626,KC012652,EU239226 ,GU815556,AB100695,EU5 70067,GQ161784,JN79289 3,GQ377578,HQ833471,H 0700493,FJ899768,GQ22 7697,HM011501,JF491455 ,DQ463789,AB205118,FJ3 86657,FJ589068,AB69749 0,AM295797,FJQ32343,GQ 377531,JQ801507,AB2705 46,AB195946,FJ904447,J 0801501,FJ518811,EU306 679,AB026814,JN257195, KC510658,FJQ23657,FJ88 2616,AB210820,DQ46379 0,AB109476,HM363585,K C875338,JQ664509,GU81 5571,HQ603080,GQ16179 6,DQ078791,GQ872210,G U815577,FJ692602,AY161 162,FJ787448,AY220697, AY945307,HM590472,FM1 99981,EU522074,HM3635 94,FR714494,FJ692581,A Y161160,EU185789,AB11 1119,AM494704,AM18062 4,GU456659,JN040809,EU 939544,JF491456,EU9162 05,AY161140,FJ562227,G 0377549,KF425555,HM14 6131,AB014394,DQ82309 4,GQ477470,AB198076,AF 241408,AF536524,JN2571 50,FN594769,JN664920,J N257185,AY641561 Hepatitis B virus NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — FJ361772 146/Thailand B virus Hepatitis B virus NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AB267090 ayw/Japan/Ehime 22- B virus HS/2005 Hepatitis B virus NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — HF571060 subgenotype A3/genotype B virus E Hepatitis B virus subtype NC_003977 vertebrates,human 2 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AB176642,AB299858 adr B virus Hepatitis B virus subtype NC_003977 vertebrates,human 3 Hepadnaviridae,Orthohepadnavirus,Hepatitis — DQ0331,DQ0330,DQ0 adw B virus 329 Hepatitis B virus subtype NC_003977 vertebrates,human 1 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AM282986 adw2 B virus Hepatitis C virus NC_009827 vertebrates,human 269 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ738645,EU362892 ,NC_00982 ,EU362907,JXQ14307 6,NC_0098 ,KC155254,JX183554 25,NC_009 ,FJ407092,FJ462433, 824,NC_00 AB047645,HQ850284 4102,NC_0 ,AB049096,DQ41878 09823 5,EF407480,JF73511 3,EF407418,AB08029 9,D89815,KC197235, EF407451,EF407438, EU246930,EU362903 ,D13558,EU362881,D 45172,EU246933,DQ 988075,FJ462441,AB 049093,JF735117,AM 408911,KC248196,E U362895,FJ462436,A B049098,EF407460,A B559564,JX183557,D 0988076,AJQ00009,K C197227,EU158186, EU362876,EF407465 ,JF735120,AJ278830, KF700370,EF407440, FJ462440,EF407469, AB049094,EU362897 ,,D50481,JF735123,E U362893,EF407431, EF632071,KC197236 ,JF735116,EF026073 ,D11168,EF632069,A B047643,JF735112,K C197232,EU362883, X61596,FJ839869,FN 666428,D63857,EF40 7444,EU362887,EF4 07482,DQ988077,JF7 35110,EF407422,AB0 49099,EU246939,D8 9872,DQ988073,DQ2 78892,EF407504,EF4 ,07502,EF407428,KC 197228,EU362877,D 30613,JX183558,D50 484,AB049100,EU36 2885,EU362901,EF4 07425,AB049101,EU 362898,EF407476,EF 407488,JX183553,EF 407436,EF407457,K C197237,D90208,EF 407445,AF511950,FJ 462438,KC197238,D 85516,D50485,KC19 7240,EF407471,AB67 7529,EF407472,FJ46 ,2434,HQ850285,DQ9 88078,AB677527,JX1 83555,EF407449,JF7 35115,KC248194,EF 407415,KC197229,J Q745651,EU362902, EF407432,JF735114, KC197234,EF407417 ,EF407427,JX183556 ,EF407470,EF407456 ,EF407454,D10750,K C248199,EU362891,J F735119,AB435162,A F511949,EF407447,K C197239,EF407423, ,AJ851228,AB677531, EF407446,EU362880 ,JX183551,KC967478 ,KC197233,EU36290 0,FJ462439,EF40749 7,AB049090,EU6438 34,JF735122,HQ8502 87,EF407492,EF4074 55,DQ0944,FJQ25855 ,KC197231,KC96747 6,EU246935,AB0490 92,JF735125,AB0490 89,EU362896,AB016 785,D11355,JF73511 1,AB047644,EF40742 ,1,EF632070,EF40741 3,EF407452,FJ46243 1,EF407479,EF40748 5,DQ437509,AB1913 33,FJ435090,EF4075 03,EF407441,HQ850 290,GU294484,EF40 7483,AB049087,AB4 29050,DQ988074,FJ8 39870,EU643836,D5 0482,EF407487,AB04 9091,HQ850283,HQ8 50282,EF407439,AB0 47640,KC248198,KC 197230,EU362884,E ,F407437,AB622121, D10934,EF407442,K C248195,FJ462432,K C967479,JX183552,E U362894,EF407493, EF407435,EF407414, FJ462437,EF407453, FJ462435,KC197226, HQ850286,AB049088 ,D50480,EF407426,E F407443,EF407501,H M777359,EF407450, DQ988079,EF407461 ,X76918,JF735121,K C248197,EF407448, ,AJ132997,AB677533, D10988,AY651061,A B047641,AB049095, EU408327,FJQ25856, EF407411,EF407434, AB049097,EF407419, EU362886,D10749,H 0850288,D14484,FJO 25854,JF735118,EU3 62890,AJ132996,EF4 07475,AY587845,KC 248193,JX183549,AF 511948,EF407424,E U362899,JF735124,E U362879,EU362878, EU362882,KC967477 ,JX183550,EF407433 ,EU408326,EU64383 5,AB047642,D50483 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — AY859526 6a33) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D50409 BEBE1) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ155561 D54) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — Y12083 EUHK2) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 3 Flaviviridae,Hepacivirus,Hepatitis C virus — AF011752,AF011753, H77) ,NC_00982 AF011751 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D14853 HC-G9) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D28917 HCV-K3a/650) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — AY051292 India) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D63822 JK046) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D63821 JK049) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — AB030907 JPUT971017) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate Tr NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D49374 Kj) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — AB031663 VAT96) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D84265 VN004) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D84263 VN235) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus (isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — D84264 VN405) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus ED43 NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — GU814265 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus JFH-1 NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — AB047639 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus S52 NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — GU814263 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus SA13 NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — AF064490 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus genotype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN588558 3 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus genotype NC_009827 vertebrates,human 3 Flaviviridae,Hepacivirus,Hepatitis C virus — D84262,KC844040,K 6 ,NC_00982 C844039 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus isolate NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — AB558135 M2123 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus strain NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — FJ821465 M21-2k/1b ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 435 Flaviviridae,Hepacivirus,Hepatitis C virus — EU255991,EU256013 la ,NC_00982 ,EU155295,EU86282 6,NC_0098 8,EU256053,EU1552 25,NC_009 85,EU155323,EU781 824,NC_00 773,EU660384,EU66 4102,NC_0 0385,EU256028,EU2 09823 39716,EU255993,EU 155237,FJ390399,EU 155344,EU155252,FJ 024278,EU255965,E U482862,FJQ24280,E U256003,EU660383, EU155349,EU255975 ,JX463550,EU155314 ,EU255937,EU25598 9,JX463563,EU48286 7,EU255994,FJQ2408 7,EU255945,EU2560 97,EU781781,EU256 106,EU482843,EU78 1790,EU256024,EU4 82836,EU781767,FJ3 90394,EU862823,FJ1 81999,AF271632,EU 155297,EU155268,E U155270,JX463640,E U155342,EU155213, EU862836,EU255981 ,EU255980,JX463599 ,FJ205867,EU255943 ,EU781774,EU78181 3,EU260396,EU7817 61,EU862834,EU482 841,EU482852,EU15 5215,EU256105,EU2 56086,EU256047,EU 781818,EU255964,E U255946,EU155273, EU482884,EU781805 ,EU781754,EU48287 0,EU256096,EU2559 49,EU155293,EU482 838,EU529677,EU78 1780,EU256036,EU7 81814,EU256044,EU 862826,EU255976,E U862824,EU155238, EU155283,EU482844 ,EF032886,EU78181 9,EU482889,EU1552 67,EU155243,EU155 348,M62321,FJ39039 5,EU256057,FJ41017 2,EU862827,EU2559 84,EU781783,EU781 749,EU687193,EU15 5378,EU482854,EU4 82863,EU255954,EU 155350,EU155313,E U256050,EU256021, EU155346,EU781806 ,EU781810,EU25595 2,EU482832,EU7817 62,EU482856,EU255 959,EU155245,EU15 5355,EU781753,EU2 55938,EU781776,EU 155321,EU255929,E F032890,EU482834, EU255998,EU155343 ,GQ149768,EU15523 9,EU255934,EU2560 58,EU255931,EU155 266,EU595697,EU26 0395,EU234064,EU4 82869,EU256033,EU 256071,EU155286,E U155312,EU781820, EU781816,EU256051 ,EU781760,EU15531 0,EF621489,EU2559 85,EU781755,EU482 831,EU155244,EU25 6056,EU255958,EU1 55250,EU781765,EU 781800,EU529680,JX 463611,EU781792,E U256049,EU256032, EU256070,EU256025 ,EU250017,EU15527 5,EU155248,EU2560 12,EU155288,EU781 809,AF290978,EU48 2848,JX463547,EU15 5236,EU781756,EU8 62839,EU155296,EU 256068,EF032900,E U781823,EU482842,J X463549,EU482840, EU482882,EU256052 ,EU256069,EU48285 0,EU781775,EU7817 95,EU256038,EU595 699,EU862841,JX463 596,EU781804,EU78 1778,EU781789,EU4 82858,EU482865,EU 256004,EU781768,A B520610,EU255970, EU155284,EU687194 ,EU482872,EU48284 7,EU155271,EU2560 27,EU781779,EU155 354,EU482861,EU15 5352,EU256029,EU2 34065,EU256094,EU 255997,EU255977,FJ 024276,EU862838,E U256008,EU155240, EU862831,EU687195 ,EU781808,EF03288 4,EU482878,EU4828 46,EU781796,EU155 233,EU256009,EU25 5942,EF032888,EU5 29678,EU255944,EU 155274,EU482855,E U781803,EU155242, EU155338,EU256014 ,EU569723,EU48284 5,EU255992,EU2560 19,EU255978,EU781 794,EU256023,FJ205 869,EU781812,EU78 1822,EU255995,EU1 55345,EU256087,EU 255930,EF032885,E U155353,EU255968, EU255973,EU660387 ,EU256040,FJ182000 ,EU155347,EU78177 7,EU256011,EU7817 88,FJ205868,EU2561 07,FJQ24282,EU8628 32,EU255947,EU482 866,EU255967,EU25 6002,EU255927,EU1 55216,EU255990,EU 256104,EU781782,E F032883,EU155379, EU482835,EU256041 ,EU482887,EU25600 6,EU256005,EU5956 98,EU255966,EU155 351,EU256037,EU48 2871,EU781784,EU2 56074,EU781769,EU 155339,EU781748,E U781802,EU256034, EU781807,EF032889 ,EU155272,EU48287 3,EU255950,KC8440 49,EU781764,EU255 996,EU781770,EU25 5948,EU256048,EU2 55974,EU781791,EU 155277,EU781817,E U155311,EU781793, EU155291,EU256018 ,EU781747,EU78176 3,EU256017,EU7817 87,EU256010,EU781 766,EU529681,EU78 1801,EU781752,EU2 55951,EU155269,EU 781772,EU256060,E U155251,EU256043, EU255936,EU155265 ,EU781824,EU48286 8,EU256072,EU8628 40,EU155249,EU256 067,EU255928,EU25 5986,EU255939,EU7 81759,EU255941,EU 255982,EU155292,E U482853,FJ182001,E U256055,JX463616,E U155278,EU255935,J X463627,EU256095, EU255987,EU155290 ,EU781746,EU15531 9,EU155340,EU2559 40,EU529679,FJQ242 81,EU781751,EU155 282,EU569722,EU78 1798,EU256031,EU2 34063,EU155320,EU 255955,EU781757,E U239715,FJQ24275,E U781771,EU155380, EU155247,EU255932 ,EU255933,EU15529 4,EU781786,EF0328 87,EU155276,FJQ242 74,EU239713,EU781 785,EU529676,EU25 6026,EU256035,M67 463,JX463634,JX463 574,EU155322,EU78 1797,EU255957,EU4 82857,EU155299,JX4 63540,EU255963,EU 255953,EU255988,E U256022,EU155341, EU155214,EU255979 ,EU155241,EU78175 0,EU255956,EU4828 64,EU256020,EU256 007,EU781821,EU25 6039,EU482876,EU2 56015,EU255999,EU 482837,EU781758,E U155289,EU155246, EU781811,EU155309 ,EU781815,EU25603 0,EU155287,EU2559 83,EU155298,EU781 799,EU256046,EU25 5969 Hepatitis C virus subtype NC_009827 vertebrates,human 269 Flaviviridae,Hepacivirus,Hepatitis C virus — AF356827,AF165060, 1b ,NC_00982 EU482880,EU155280 6,NC_0098 ,AF165045,EU15536 25, NC_009 2,AB154206,AF17657 824,NC_00 3,EU155372,EU1552 4102,NC_0 20,EU660386,EU256 09823 065,EU155324,EU25 6099,EU155369,AB1 54185,AB154202,EU 155303,M96362,M84 754,EU256103,AB44 2222,EU256092,AB1 54182,AF165063,EU 155307,AB154191,K C844051,AF483269, EU256001,EU155279 ,DQ071885,EU48288 5,EU155360,AB1541 92,AF207753,AB1541 86,EU155308,EU155 229,EU256054,EF03 2893,AF207763,AB15 4203,EU155356,EU2 56081,EU155264,AF 054250,AF207770,AF 165053,EU482886,A B154181,EU256101, EU256102,EU239714 ,EU155221,AF33332 4,EU256077,EU2560 80,AB442221,EU155 262,AB154190,EU23 4061,EU155359,AF2 07755,EU255962,EU 155375,AF207771,E U155230,EU255961, AF207762,AB154187, AB154200,EU155231 ,AB442219,EU15522 6,EU155331,AF2077 56,EU155326,EU155 334,U16362,EU1553 16,EU256079,AF165 064,EU155367,U890 19,EU482877,AB442 220,AF208024,EU25 6100,EU256061,EU1 55332,AF207758,EU 155325,AY045702,E U155258,AF165046, EU781829,EU256082 ,AF165048,AB154201 ,AF207757,EU78182 6,EU155306,AF0542 48,AB691953,AF1650 54,EU781825,AF207 768,EU234062,EU48 2879,EU862837,EU2 56078,S62220,EU155 357,AF207774,EU25 6075,FJQ24277,AB15 4189,EU155368,AF1 65062,EU155257,AF 207769,EU256062,E U256084,EU155364, AF165050,FN435993, EU155333,EU256090 ,EU155259,AF20776 6,EU155373,AF2077 73,EF032892,AB1541 78,EU155281,AF207 759,EU256000,EU15 5318,EU155219,EU4 82881,FJ390396,AF1 65047,EU155366,M5 8335,EU482849,AF1 65051,EU256098,EU 482859,AF207760,AF 165056,EU155222,E U256045,EU857431, EU482839,AB154179 ,AB154177,EU15536 1,AF165049,FJ47845 3,AF207754,EU1552 25,AF165052,FJQ240 86,EU529682,EU155 329,EU155365,EU25 6088,FJQ24279,EU15 5223,HQ912956,EU4 82875,AB426117,EU 155232,EU256076,E U155376,AB154198, EU155260,EU155302 ,EU256066,EU15537 0,EU155337,L02836, EU155377,AB154204 ,EU155336,AF20776 1,EU155317,EU1552 53,EU155301,AF207 767,EU155328,AB77 9679,AF139594,EU1 55234,U45476,AF207 765,EU155304,EU78 1827,EU482883,AF0 54247,EU256083,EU 781831,AF165057,E U482874,GU133617, AF207752,EU155224 ,AB154194,EU15526 3,EU155255,AY5878 44,EU155327,HQ912 958,EU255960,EU86 2835,AF054249,EU1 55330,EU155358,EU 155300,EU155218,E U482860,EU155381, EU155228,AF207772 ,EU155261,EU15537 4,FJ390397,AB15419 9,EU781830,AF2077 64,EU155305,AF165 058,AY460204,EU25 6089,EF638081,AF16 5061,AB154180,EU7 81832,EU155227,AJ2 38799,EU155254,EU 256085,EU155335,K C844052,EU482888, AJ238800,EU155315, AB154205,EU155363 ,EU660388,AF16505 9,EU155371,HQ9129 59,EU482833,EU155 235,AB779562,EU25 6059,AB154183,EU7 81828,EU256064,EU 155256,EU155217,A B249644,EU256091, U01214,AF165055,FJ 390398,EU155382 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — KC844047 lc ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — AM910652 1g ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 15 Flaviviridae,Hepacivirus,Hepatitis C virus — KF676351,AF169004, 2a ,NC_00982 AF238484,AB690461, 6,NC_0098 AF238485,AF169003, 25,NC_009 AF238482,KC844043 824,NC_00 ,AF238481,AB690460 4102,NC_0 ,AF238483,AF169002 09823 ,KF676352,AF169005 ,AY746460 Hepatitis C virus subtype NC_009827 vertebrates,human 22 Flaviviridae,Hepacivirus,Hepatitis C virus — KC844048,AY232738 2b ,NC_00982 , ,AY232745,AY23273 6,NC_0098 , 3,AY232746,AY2327 25,NC_009 , 42,AY232735,AY232 824,NC_00 , 749,AY232747,AY23 4102,NC_0 , 2743,AY232734,AY2 09823 ,32740,AY232737,AF2 38486,AY232732,AY 232731,AY232744,A Y232730,AY232739, AY232741,AY232736 ,AY232748 Hepatitis C virus subtype 2f NC_009827 vertebrates,human 2 Flaviviridae,Hepacivirus,Hepatitis C virus — KC844042,KC844050 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 19 Flaviviridae,Hepacivirus,Hepatitis C virus — KF035124,AB792683, 3a ,NC_00982 JQ717255,KF035125, 6,NC_0098 KF035123,KC844041 25,NC_009 ,JQ717256,JQ717258 824,NC_00 ,GQ275355,JQ71725 4102,NC_0 9,AF046866,JQ71725 09823 7,JN714194,KF03512 7,JQ717254,KF03512 6,AB691595,AB6915 96,JQ717260 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — KC844044 3b ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 8 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ418784,DQ41878 4a ,NC_00982 8,DQ418787,DQ5160 6,NC_0098 84,DQ418789,AB795 25,NC_009 432,DQ418783,DQ41 824,NC_00 8782 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 3 Flaviviridae,Hepacivirus,Hepatitis C virus — KC844045,DQ516083 4d ,NC_00982 ,DQ418786 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype 4f NC_009827 vertebrates,human 2 Flaviviridae,Hepacivirus,Hepatitis C virus — EF589161,EF589160 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — KC844046 5a ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 15 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ480519,DQ48052 6a ,NC_00982 1,DQ480518,DQ4805 6,NC_0098 20,KC844037,DQ480 25,NC_009 515,DQ480512,DQ48 824,NC_00 0514,DQ480523,DQ4 4102,NC_0 80513,KC844038,DQ 09823 480516,DQ480524,D 0480522,DQ480517 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — EF424629 6c ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ314805 6e ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype 6f NC_009827 vertebrates,human 2 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ835764,DQ83576 ,NC_00982 0 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ314806 6g ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype 6i NC_009827 vertebrates,human 2 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ835762,DQ83577 ,NC_00982 0 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype 6j NC_009827 vertebrates,human 2 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ835769,DQ83576 ,NC_00982 1 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 4 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ278893,AY878651 6k ,NC_00982 ,DQ278891,AY87865 6,NC_0098 0 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype 61 NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — EF424628 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 4 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ835767,DQ83576 6m ,NC_00982 3,DQ835766,DQ8357 6,NC_0098 65 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 3 Flaviviridae,Hepacivirus,Hepatitis C virus — DQ835768,DQ27889 6n ,NC_00982 4,AY878652 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — EF424627 6o ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — EF424626 6p ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — EF424625 6q ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis C virus subtype NC_009827 vertebrates,human 2 Flaviviridae,Hepacivirus,Hepatitis C virus — EU798761,EU798760 6v ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Hepatitis E virus NC_001434 vertebrates,human 189 Hepeviridae,Hepevirus,Hepatitis E virus — AB189074,AB291963 ,AB248521,AB78045 1,JF443719,DQ45007 2,AB222184,D11092, AF051830,AB291966, AB220971,AY575858 ,FJ653660,AB369689 ,AB290313,AF455784 ,AB193177,AB07491 5,AF076239,X98292, AB480825,AY723745 ,JN906976,AB301710 ,L08816,AB437316,J F443725,JX121233,J X565469,AB291967, EF077630,M94177,E F570133,AB291953,J 0953665,AB521805,J 0953664,AB443624, AB362840,AB099347 ,JQ655734,AB698654 ,AB189073,M73218,J F443721,AB443623, HM439284,AB740220 ,M80581,AB291952,J F915746,AB630970,A B291959,AB189072, AB369688,AB222182 ,KC492825,AB29195 7,AB443625,D11093, JN906975,JN167537, AB602441,AB220975 ,JN906974,AY575859 ,L25595,AB780452,A B362839,JQ655733,A B220972,JF443726,A B856243,AB369690, AB740221,FJ906895, AB602440,AB189071 ,AB291954,AB43731 7,AB220976,AB5917 33,AF444002,AB0749 17,AB573435,AB291 958,AB197673,JQ740 781,HQ709170,DQ45 9342,HQ389543,EU4 95148,AB591734,AB 425831,JQ953666,JQ 655735,AB291962,AF 185822,AB369687,FJ 527832,AB291965,A Y204877,AB089824, HQ634346,AB220978 ,EU360977,AB74023 2,AB362842,AF45943 8,JF443724,AB36969 1,AB220973,AJ27210 8,JN167538,EU37546 3,AB220979,HQ3895 44,AB291955,AB236 320,GU937805,AB09 1395,AB602439,EU3 66959,AB108537,AB 091394,JF443723,AB 222183,AF060669,AB 074918,AB290312,D1 0330,AY575857,AB1 89075,AF444003,AB4 43627,AB437318,KC 618402,AB193176,G U206559,AB291964, AB074920,AB780453 ,AB720035,JQ993308 ,AB248520,AB43731 9,AB080575,JF44372 0,AB780450,AB2485 22,AB200239,AB246 676,JQ655736,JF443 717,FJ906896,JQ768 461,AB291951,L2554 7,AB291968,AB2209 77,FJ956757,AB0978 12,AY230202,AB630 971,FJ457024,AB291 956,AB720034,AB18 9070,FJ763142,JF44 3718,AB253420,AB2 20974,AB521806,AB 362843,AB291960,A B425830,AB740222, AB291961,FJ705359, JF443722,AB362841, AB197674,JN837481, KC618403,AB193178 ,AP003430,X99441,A B443626,JX109834 Hepatitis E virus type 3 NC_001434 vertebrates,human 1 Hepeviridae,Hepevirus,Hepatitis E virus — AB593690 Hepatitis G virus isolate NC_001710 vertebrates,human 1 Flaviviridae,Pegivirus,GB virus C — AF309966 PEI Hepatitis delta virus NC_001653 vertebrates,human 108 Deltavirus,Hepatitis delta virus — HQ005370,AM18332 9,HQ005365,AB0379 49,AB118842,M8491 7,AJ584849,AJ58484 4,HM046802,AB1188 49,AY633627,AB118 821,AB118839,AB11 8837,AB118829,M28 267,M92448,KF6605 98,AM183332,HQ005 364,AB118820,AB11 8832,EF514905,DQ10 75,M58629,AB11881 8,AB118833,AJ30707 7,AB037948,U81989, HQ005366,AB118827 ,AY648956,HQ00537 1,AM183331,HF6794 05,AY648958,AB118 844,HQ005367,AY26 1460,GU177114,AJ5 84845,AB118846,AB 118845,AB118826,A B118840,AY648953, X85253,AB037947,A B118836,AB118838, AY648957,AF104263, AY648959,AB118830 ,AB118819,AY64895 5,AB088679,AB1188 41,AJ584848,EF5149 07,AB118843,XQ4451 ,KF660602,AB118822 ,KC590319,EF51490 4,L22066,AF104264, HQ005369,AM18332 7,EF514906,AB11884 8,AM183330,U81988, AB118824,AY261458 ,AJ584847,AB118823 ,M21012,KF660599, M55042,HF679406,A M183333,AB118847, AY261459,HQ005368 ,AB118828,X77627,A M183328,AJ584846, AY261457,AJQ00558, KF660600,AF098261, AM183326,AB118831 ,HQ005372,AB11882 5,AY648952,EF51490 3,AB118835,AF42564 5,HF679404,AY6489 54,KF660601,AB1188 34,AF425644 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902177 dFr2012 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902178 dFr2040 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902179 dFr2042 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902180 dFr2043 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902168 dFr2045 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779580 dFr2046 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902163 dFr2067 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779575 dFr2119 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902164 dFr2137 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902165 dFr2172 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902166 dFr2189 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902167 dFr2201 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902181 dFr2210 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902169 dFr2236 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779578 dFr2239b Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902170 dFr2244 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902171 dFr2258 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902172 dFr2264 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779577 dFr2284 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902173 dFr2380 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779579 dFr2395 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902174 dFr2404 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902175 dFr2406 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM902176 dFr2411 Hepatitis delta virus NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779576 dFr2544 Hepatitis delta virus dFr508 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779574 Hepatitis delta virus dTk1 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779581 Hepatitis delta virus dTk10 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779583 Hepatitis delta virus dTk12 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779595 Hepatitis delta virus dTk13 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779593 Hepatitis delta virus dTk2 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779597 Hepatitis delta virus dTk21 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779596 Hepatitis delta virus dTk27 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779594 Hepatitis delta virus dTk28 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779586 Hepatitis delta virus dTk3 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779589 Hepatitis delta virus dTk34 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779582 Hepatitis delta virus dTk35 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779590 Hepatitis delta virus dTk38 Hepatitis delta virus dTk4 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779584 Hepatitis delta virus dTk5 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779591 Hepatitis delta virus dTk6 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779585 Hepatitis delta virus dTk7 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779587 Hepatitis delta virus dTk8 NC_001653 vertebrates,human 1 Deltavirus,Hepatitis delta virus — AM779592 HoJo virus NC_005219 vertebrates,human 1 Bunyaviridae,Hantavirus,Hantaan virus seg. M DQ0376 Horsepox virus NC_006998 vertebrates,human 1 Poxviridae,Orthopoxvirus,Vaccinia virus — DQ792504 Hu39694 virus NC_003467 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. M AF028023 Human Respiratory NC_001781 vertebrates,human 1 Paramyxoviridae,Pneumovirus,Human — AY353550 syncytial virus 9320 respiratory syncytial virus Human adenovirus 1 NC_001405 vertebrates,human 3 Adenoviridae,Mastadenovirus,Human — KF429744,KF268331, adenovirus C AF534906 Human adenovirus 11 NC_011202 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — FJ643676,AF532578 adenovirus B Human adenovirus 11 NC_011203 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — FJ643676,AF532578 adenovirus B Human adenovirus 11a NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJ597732 adenovirus B Human adenovirus 11a NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJ597732 adenovirus B Human adenovirus 14 NC_011202 vertebrates,human 4 Adenoviridae,Mastadenovirus,Human — FJ822614,JX892927, adenovirus B AY803294,JN032132 Human adenovirus 14 NC_011203 vertebrates,human 4 Adenoviridae,Mastadenovirus,Human — FJ822614,JX892927, adenovirus B AY803294,JN032132 Human adenovirus 15 NC_010956 vertebrates,human 3 Adenoviridae,Mastadenovirus,Human — AB562586,KF268201, ,NC_01295 adenovirus D KF268329 9 Human adenovirus 16 NC_011202 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — JN860680,AY601636 adenovirus B Human adenovirus 16 NC_011203 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — JN860680,AY601636 adenovirus B Human adenovirus 17 NC_010956 vertebrates,human 3 Adenoviridae,Mastadenovirus,Human — KF268330,HQ910407 ,NC_01295 adenovirus D ,AF108105 9 Human adenovirus 18 NC_001460 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — GU191019 adenovirus A Human adenovirus 19 NC_010956 vertebrates,human 7 Adenoviridae,Mastadenovirus,Human — KF268323,EF121005, ,NC_01295 adenovirus D AB448773,AB448774 9 ,AB448772,AB44877 1,JQ326209 Human adenovirus 2 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF268310 adenovirus C Human adenovirus 20 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF268207 ,NC_01295 adenovirus D 9 Human adenovirus 21 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AY601633 adenovirus B Human adenovirus 21 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AY601633 adenovirus B Human adenovirus 22 NC_010956 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — FJ619037,FJ404771 ,NC_01295 adenovirus D 9 Human adenovirus 23 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF279629 ,NC_01295 adenovirus D 9 Human adenovirus 26 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — EF153474 ,NC_01295 adenovirus D 9 Human adenovirus 28 NC_010956 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — KF268320,FJ824826 ,NC_01295 adenovirus D 9 Human adenovirus 29 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AB562587 ,NC_01295 adenovirus D 9 Human adenovirus 3 NC_011202 vertebrates,human 7 Adenoviridae,Mastadenovirus,Human — KF268212,KF268210, adenovirus B KF268202,AY599834, AY599836,KF268315, KF429752 Human adenovirus 3 NC_011203 vertebrates,human 7 Adenoviridae,Mastadenovirus,Human — KF268212,KF268210, adenovirus B KF268202,AY599834, AY599836,KF268315, KF429752 Human adenovirus 3+11p NC_011202 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — EF564600,EF564601 adenovirus B Human adenovirus 3+11p NC_011203 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — EF564600,EF564601 adenovirus B Human adenovirus 3+7 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JN860679 adenovirus B Human adenovirus 3+7 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JN860679 adenovirus B Human adenovirus 3-16 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JN860678 adenovirus B Human adenovirus 3-16 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JN860678 adenovirus B Human adenovirus 30 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF268335 ,NC_01295 adenovirus D 9 Human adenovirus 31 NC_001460 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AM749299 adenovirus A Human adenovirus 32 NC_010956 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — KF268325,KF268327 ,NC_01295 adenovirus D 9 Human adenovirus 33 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF268322 ,NC_01295 adenovirus D 9 Human adenovirus 34 NC_011202 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — KF268328,AY737797 adenovirus B Human adenovirus 34 NC_011203 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — KF268328,AY737797 adenovirus B Human adenovirus 35 NC_011202 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — AY128640,AY271307 adenovirus B Human adenovirus 35 NC_011203 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — AY128640,AY271307 adenovirus B Human adenovirus 36 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — GQ384080 ,NC_01295 adenovirus D 9 Human adenovirus 37 NC_010956 vertebrates,human 9 Adenoviridae,Mastadenovirus,Human — AB448775,KF268208, ,NC_01295 adenovirus D KF268324,AB448778, 9 AB448777,AB448776 ,KF268203,DQ90090 0,KF268334 Human adenovirus 38 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF268312 ,NC_01295 adenovirus D 9 Human adenovirus 4 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF268313 ,NC_01295 adenovirus D 9 Human adenovirus 4 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF429748 adenovirus B Human adenovirus 4 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF429748 adenovirus B Human adenovirus 43 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KC529648 ,NC_01295 adenovirus D 9 Human adenovirus 46 NC_010956 vertebrates,human 3 Adenoviridae,Mastadenovirus,Human — KF268332,AY875648, ,NC_01295 adenovirus D KF268211 9 Human adenovirus 48 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — EF153473 ,NC_01295 adenovirus D 9 Human adenovirus 49 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — DQ393829 ,NC_01295 adenovirus D 9 Human adenovirus 5 NC_001405 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — AY601635,M73260 adenovirus C Human adenovirus 50 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AY737798 adenovirus B Human adenovirus 50 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AY737798 adenovirus B Human adenovirus 53 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJ169625 ,NC_01295 adenovirus D 9 Human adenovirus 54 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AB448770 ,NC_01295 adenovirus D 9 Human adenovirus 55 NC_011202 vertebrates,human 3 Adenoviridae,Mastadenovirus,Human — JX123028,JX123029, adenovirus B JX123027 Human adenovirus 55 NC_011203 vertebrates,human 3 Adenoviridae,Mastadenovirus,Human — JX123028,JX123029, adenovirus B JX123027 Human adenovirus 56 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF268209 ,NC_01295 adenovirus D 9 Human adenovirus 6 NC_001405 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — FJ349096,HQ413315 adenovirus C Human adenovirus 60 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — HQ007053 MPW-2011 ,NC_01295 adenovirus D 9 Human adenovirus 64 NC_010956 vertebrates,human 4 Adenoviridae,Mastadenovirus,Human — JQ326206,JQ326207, ,NC_01295 adenovirus D JQ326208,KF268213 9 Human adenovirus 67 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AP012302 ,NC_01295 adenovirus D 9 Human adenovirus 7 NC_011202 vertebrates,human 10 Adenoviridae,Mastadenovirus,Human — AY601634,JF800905, adenovirus B AY594256,HQ659699 ,KF268314,AY594255 ,AY495969,KF268316 ,GQ478341,JX62513 4 Human adenovirus 7 NC_011203 vertebrates,human 10 Adenoviridae,Mastadenovirus,Human — AY601634,JF800905, adenovirus B AY594256,HQ659699 ,KF268314,AY594255 ,AY495969,KF268316 ,GQ478341,JX62513 4 Human adenovirus 7d2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JN860677 adenovirus B Human adenovirus 7d2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JN860677 adenovirus B Human adenovirus 7h NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JN860676 adenovirus B Human adenovirus 7h NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JN860676 adenovirus B Human adenovirus 8 NC_010956 vertebrates,human 14 Adenoviridae,Mastadenovirus,Human — KF268333,KF429743, ,NC_01295 adenovirus D KF429746,AB448768, 9 AB448767,KF429750, KF429747,KF429745, KF429751,KF268205, AB448769,KF429749, KF268321,KF429753 Human adenovirus 9 NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — KF268206 ,NC_01295 adenovirus D 9 Human adenovirus A NC_001460 vertebrates,human 2 Adenoviridae,Mastadenovirus,Human — KF268119,X73487 adenovirus A Human adenovirus B NC_011202 vertebrates,human 31 Adenoviridae,Mastadenovirus,Human — JX423384,KF633445, adenovirus B AY163756,JX423385, JX491639,JX423386, KF268311,KF268133, JX423380,KF268120, DQ099432,KF268125 ,KF268124,KF268134 ,JX423382,KF268121 ,KF268117,KF268128 ,KF268196,JX423383 ,KF268132,KF268123 ,KF268135,KF268126 ,JX423388,AY598970 ,EF011630,JX423387 ,DQ105654,KF26813 1,JX423381 Human adenovirus B NC_011203 vertebrates,human 31 Adenoviridae,Mastadenovirus,Human — JX423384,KF633445, adenovirus B JX423385,JX491639, JX423386,KF268311, KF268133,JX423380, KF268120,DQ099432 ,KF268125,DQ08646 6,KF268124,KF26813 4,JX423382,KF26812 1,KF268117,KF26812 8,KF268196,JX42338 3,KF268132,KF26812 3,KF268135,KF26812 6,JX423388,AY59897 0,EF011630,JX42338 7,DQ105654,KF2681 31,JX423381 Human adenovirus C NC_001405 vertebrates,human 18 Adenoviridae,Mastadenovirus,Human — KF268199,JX173086, adenovirus C JX173085,KF268130, JX173080,JX423389, KF429754,JX173079, JX173083,JQ1917,AY 339865,JX173078,KF 268129,JX173082,KF 268127,JX173084,JX 173077,JX173081 Human adenovirus NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — HM770721 CR/France/2008 ,NC_01295 adenovirus D 9 Human adenovirus D NC_010956 vertebrates,human 15 Adenoviridae,Mastadenovirus,Human — KF268197,JN162672, ,NC_01295 adenovirus D AB605242,AB605240 9 ,KF268122,AB605243 ,AB605244,AB60524 5,AB605246,KF26811 8,AB605241,AJ85448 6,KF268198,AB56258 8,JN162671 Human adenovirus D NC_010956 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — AP012285 B172/Dhaka City ,NC_01295 adenovirus D 9 Human adenovirus JJS- NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — HQ003817 2010 adenovirus C Human adenovirus MZ NC_001460 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — JF964962 adenovirus A Human astrovirus NC_001943 vertebrates,human 5 Astroviridae,Mamastrovirus,Mamastrovirus 1 — FJ375759,JF327666, AF141381,AB308374, L13745 Human astrovirus 1 NC_001943 vertebrates,human 5 Astroviridae,Mamastrovirus,Mamastrovirus 1 — L23513,AY720892,H 0398856,KF211475,J N887820 Human astrovirus 1 NC_001943 vertebrates,human 1 Astroviridae,Mamastrovirus,Mamastrovirus 1 — FJ755402 Beijing/128/2005/CH N Human astrovirus 1 NC_001943 vertebrates,human 1 Astroviridae,Mamastrovirus,Mamastrovirus 1 — FJ755403 Beijing/176/2006/CH N Human astrovirus 1 NC_001943 vertebrates,human 1 Astroviridae,Mamastrovirus,Mamastrovirus 1 — FJ755404 Beijing/291/2007/CH N Human astrovirus 1 NC_001943 vertebrates,human 1 Astroviridae,Mamastrovirus,Mamastrovirus 1 — FJ755405 Beijing/293/2007/CH N Human astrovirus 2 NC_001943 vertebrates,human 2 Astroviridae,Mamastrovirus,Mamastrovirus 1 — KF039911,KF039910 Human astrovirus 4 NC_001943 vertebrates,human 5 Astroviridae,Mamastrovirus,Mamastrovirus 1 — KF039913,DQ070852 ,AY720891,DQ34402 7,KF039912 Human astrovirus 5 NC_001943 vertebrates,human 2 Astroviridae,Mamastrovirus,Mamastrovirus 1 — JQ403108,DQ028633 Human astrovirus 6 NC_001943 vertebrates,human 2 Astroviridae,Mamastrovirus,Mamastrovirus 1 — GQ495608,HM23736 3 Human astrovirus 8 NC_001943 vertebrates,human 1 Astroviridae,Mamastrovirus,Mamastrovirus 1 — AF260508 Human bocavirus NC_007455 vertebrates,human 123 Parvoviridae,Bocavirus,Human bocavirus — JN387081,EF450736, GQ455987,JF327789 ,EU984236,JN387079 ,EF450731,FJ560720 ,AB481071,EF450722 ,AB481080,EF450739 ,AB481073,EU26297 8,AB480171,EF45072 9,JX887481,AB48108 5,AB480175,JN12895 4,DQ457413,JN1289 55,JN632515,FJ6954 72,DQ988934,JN086 998,JN387083,AB481 084,EF450727,EU98 4239,JQ411251,EF45 0717,JQ964115,EU9 84245,JN387080,EF4 50733,AB481082,EU 984235,EU984243,JN 632514,JN632511,AB 480176,EF450718,JN 632513,EF450724,AB 481077,EF450732,EF 450737,JF699044,HO 585888,DQ000495,E F450738,AB481083,E F450735,EF203921,A B481076,EU984231,J N632519,EF450734, AB480170,EF450726, GQ925675,JQ964116 ,AB480172,JF327788 ,AB480174,AB55103 2,EF450728,EF45072 0,EU984238,EF4507 21,JN387084,EF4507 30,GQ926981,JX887 480,JQ923422,JF327 786,EF203922,EU26 2979,DQ340570,KC8 23115,JN794566,JN3 87085,GQ926983,EU 984233,JN794565,FJ 496754,AB481081,E U984241,AB481074, EU984244,DQ988933 ,JN632518,AB481075 ,EF450723,GU13942 3,GQ455988,EU9842 40,JX887482,EF4507 19,EU984242,EF450 740,EU984237,EF45 0725,GU338055,FJ85 8259,AB481072,JN12 8953,GQ926982,JN6 32516,EF203920,JQ9 64114,JF327787,JN6 32517,DQ000496,JN 387082,AB480173,E U984232,AB481078, AB481079,JN128956, EU984234,JN632512 Human bocavirus 2 NC_012042 vertebrates,human 15 Parvoviridae,Bocavirus,Human bocavirus 2 — FJ973560,FJ170278, FJ948860,GUO48664, GU301645,EU082213 ,GU048662,FJ170279 ,FJ170280,EU082214 ,GU301644,FJ973558 ,FJ973559,GQ20073 7,GU048663 Human bocavirus 3 NC_012564 vertebrates,human 7 Parvoviridae,Bocavirus,Human bocavirus 3 — HM132056,GQ86766 7,EU918736,GU0486 65,FJ973562,FJ9488 61,GQ867666 Human bocavirus 4 NC_012729 vertebrates,human 1 Parvoviridae,Bocavirus,Human bocavirus 4 — FJ973561 Human bocavirus WLL-1 NC_007455 vertebrates,human 1 Parvoviridae,Bocavirus,Human bocavirus — DQ778300 Human bocavirus WLL-2 NC_007455 vertebrates,human 1 Parvoviridae,Bocavirus,Human bocavirus — EF441262 Human bocavirus WLL-3 NC_007455 vertebrates,human 1 Parvoviridae,Bocavirus,Human bocavirus — EF584447 Human bocavirus isolate NC_007455 vertebrates,human 1 Parvoviridae,Bocavirus,Human bocavirus — FJ375127 SH1 Human bocavirus isolate NC_007455 vertebrates,human 1 Parvoviridae,Bocavirus,Human bocavirus — FJ375128 SH2 Human bocavirus isolate NC_012042 vertebrates,human 1 Parvoviridae,Bocavirus,Human bocavirus 2 — FJ375129 SH3 Human calicivirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY032605 Hu/NLV/G11/MD145- 12/1987/US Human calicivirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY581254 Hu/NLV/Oxford/B5522/200 3/UK Human calicivirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY485642 N LV/G11/Langen 1061/2002/ DE Human calicivirus strain NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY237415 Mc37 Human coronavirus 229E NC_002645 vertebrates,human 6 Coronaviridae,Alphacoronavirus,Human — KF514430,AF304460, coronavirus 229E JX503060,KF514433, JX503061,KF514432 Human coronavirus HKU1 NC_006577 vertebrates,human 36 Coronaviridae,Betacoronavirus,Human — KF430202,DQ415901 coronavirus HKU1 ,AY597011,KF686343 ,HM034837,KF68633 9,AY884001,DQ4159 09,DQ415904,KF686 342,KF686340,DQ41 5907,KF850450,DQ4 15902,KF686344,KF4 30199,DQ415903,KF 686341,DQ415908,D 0415914,DQ339101, DQ415900,DQ41590 6,KF686338,KF68634 6,DQ415905,DQ4158 98,KF430201,DQ415 899,DQ415913,DQ41 5912,KF686345,DQ4 15896,DQ415897,DQ 415911,DQ415910 Human coronavirus NL63 NC_005831 vertebrates,human 24 Coronaviridae,Alphacoronavirus,Human — JQ765572,JX104161, coronavirus N L63 JQ900257,JQ765569, JQ765566,JQ765575, JQ765564,JQ900256, JQ765570,JQ900259, JQ765563,JQ765574, DQ445911,CS124012 ,JQ765565,J X504050 ,JQ765567,DQ44591 2,JQ765573,JX52417 1,JQ765568,AY56748 7,JQ765571,JQ90025 5 Human coxsackievirus A1 NC_002058 vertebrates,human 3 Picornaviridae,Enterovirus,Enterovirus C — JX174177,AF499635, JX174176 Human coxsackievirus A10 NC_001612 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus A — AY421767,HQ728262 Human coxsackievirus A11 NC_002058 vertebrates,human 6 Picornaviridae,Enterovirus,Enterovirus C — DQ995634,DQ99563 3,JF260917,JF26091 9,AF499636,JF26091 8 Human coxsackievirus A12 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AY421768 Human coxsackievirus A13 NC_002058 vertebrates,human 16 Picornaviridae,Enterovirus,Enterovirus C — DQ995642,DQ99564 0,DQ995637,DQ9956 36,DQ995635,DQ995 641,JF260920,AF465 511,AF499637,DQ99 5638,JF260923,JF26 0922,JF260921,DQ99 5644,DQ995639,DQ9 95643 Human coxsackievirus A14 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AY421769 Human coxsackievirus A15 NC_002058 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus C — AF465512,AF499638 Human coxsackievirus A16 NC_001612 vertebrates,human 34 Picornaviridae,Enterovirus,Enterovirus A — JXQ68827,JQ746666, JX481738,JF738003, JX986740,KC695830, JN674176,JF738004, EU812514,JQ316639 ,KC117318,AF17791 1,JX986741,KC11731 7,KC342228,JQ0341 49,EU262658,JXQ688 30,J XQ68833,JQ7466 60,AY790926,HQ423 141,JXQ68828,JXQ68 832,HQ269389,J XQ6 8829,JX507808,JX83 9965,J XQ68831,GQ2 79368,JQ746661,JX9 86742,FJ198212,GQ 279371 Human coxsackievirus A17 NC_002058 vertebrates,human 6 Picornaviridae,Enterovirus,Enterovirus C — JF260924,DQ995645, JF260925,FM955278, DQ995646,AF499639 Human coxsackievirus A18 NC_002058 vertebrates,human 3 Picornaviridae,Enterovirus,Enterovirus C — AF465513,AB205396, AF499640 Human coxsackievirus A19 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — AF499641 Human coxsackievirus A2 NC_001612 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus A — AY421760,HQ728259 Human coxsackievirus A20 NC_002058 vertebrates,human 3 Picornaviridae,Enterovirus,Enterovirus C — DQ358078,AF499642 ,AF465514 Human coxsackievirus A21 NC_002058 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus C — AF546702,AF465515 Human coxsackievirus A21 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — DQ0538 Coe Human coxsackievirus A22 NC_002058 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus C — DQ995647,JN542510 ,AF499643,DQ99564 8 Human coxsackievirus A24 NC_002058 vertebrates,human 19 Picornaviridae,Enterovirus,Enterovirus C — EF026081,JF742578, D90457,AB769160,J N228097,AB769154, DQ443001,AB769159 ,AB769162,AB76916 5,AB769164,JF74257 7,AB769161,JF74257 9,JF742576,AB76916 3,AB769156,DQ4430 02,AB769152 Human coxsackievirus A3 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AY421761 Human coxsackievirus A4 NC_001612 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus A — HQ728260,AY421762 Human coxsackievirus AS NC_001612 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus A — AY421763,HQ728261 Human coxsackievirus A6 NC_001612 vertebrates,human 9 Picornaviridae,Enterovirus,Enterovirus A — JQ946053,AB678778, JQ946051,JQ946054, JQ964234,JQ946055, JQ946052,AY421764, JQ946050 Human coxsackievirus A7 NC_001612 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus A — AY421765,JQ041367 Human coxsackievirus A8 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AY421766 Human coxsackievirus A9 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — DQ0627 Human coxsackievirus B1 NC_001472 vertebrates,human 7 Picornaviridae,Enterovirus,Enterovirus B — AY186745,JN596588, AY186748,AY186746 ,AY186747,JX976769 ,EU147493 Human coxsackievirus B2 NC_001472 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus B — AF081485,EF174468, AF085363,EF174469 Human coxsackievirus B3 NC_001472 vertebrates,human 20 Picornaviridae,Enterovirus,Enterovirus B — U57056,AF231764,A F231763,JX976770,A Y752945,AY752944, M88483,AY752946,M 16572,GU109481, M3 3854,FJQ00001,FJ35 7838,JN979570,GQ1 41875,EU144042,KC 481610,AY673831,JX 312064,AF231765 Human coxsackievirus B4 NC_001472 vertebrates,human 6 Picornaviridae,Enterovirus,Enterovirus B — AF311939,DQ480420 ,S76772,XQ5690,JX3 08222,AF328683 Human coxsackievirus B5 NC_001472 vertebrates,human 13 Picornaviridae,Enterovirus,Enterovirus B — AY875692,GU376747 ,HQ998851,JXQ1738 0,X67706,JXQ17382,J X276378,JN580070,J N695050,AF114383,J N695051,JXQ17383,J XQ17381 Human coxsackievirus B6 NC_001472 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus B — JQ041368,AF114384, AF105342,AF039205 Human echovirus 11 NC_001472 vertebrates,human 6 Picornaviridae,Enterovirus,Enterovirus B EF634316,X80059,AJ 276224,AJ577594,AJ 577590,AJ577589 Human echovirus 12 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — X79047,X77708 Human echovirus 13 NC_001472 vertebrates,human 5 Picornaviridae,Enterovirus,Enterovirus B — AB501332,AB501329 ,AB501330,AB50133 1,AY302539 Human echovirus 14 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302540 Human echovirus 15 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302541 Human echovirus 16 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302542 Human echovirus 17 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302543 Human echovirus 18 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — AF317694,HM777023 Human echovirus 19 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302544 Human echovirus 2 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — AY302545,AF465518 Human echovirus 20 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302546 Human echovirus 21 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302547 Human echovirus 24 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302548 Human echovirus 25 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — AY302549,HM031191 Human echovirus 26 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302550 Human echovirus 27 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302551 Human echovirus 29 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302552 Human echovirus 3 NC_001472 vertebrates,human 13 Picornaviridae,Enterovirus,Enterovirus B — AB647324,AB647318 ,AB647326,AB64732 0,AB647325,AB6473 19,AY302553,AJ8499 42,AB647322,AB647 317,AB647321,AB64 7323,AB647316 Human echovirus 30 NC_001472 vertebrates,human 5 Picornaviridae,Enterovirus,Enterovirus B — JN704615,DQ246620 ,AF311938,DQ53420 5,AF162711 Human echovirus 31 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302554 Human echovirus 32 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302555 Human echovirus 33 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302556 Human echovirus 4 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — AY302557,FJ172447 Human echovirus 5 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — HM775882,AF083069 Human echovirus 6 NC_001472 vertebrates,human 5 Picornaviridae,Enterovirus,Enterovirus B — U16283,AY302558,A F465517,HM185055, JQ729993 Human echovirus 7 NC_001472 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus B — AY036578,AF465516, AY302559,AY036579 Human echovirus 9 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — AF524867,AF524866 Human endogenous NC_022518 vertebrates,human 1 Retroviridae,Human endogenous retrovirus K — AY037928 retrovirus K113 Human endogenous NC_022518 vertebrates,human 1 Retroviridae,Human endogenous retrovirus K — AY037929 retrovirus K115 Human enteric coronavirus NC_012950 vertebrates,human 1 Coronaviridae,Human enteric coronavirus — FJ938067 strain 4408 strain 4408 Human enterovirus 100 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — DQ902713 Human enterovirus 101 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY843308 Human enterovirus 102 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — EF555645 Human enterovirus 104 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — AB686524 Human enterovirus 107 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AB426609 Human enterovirus 68 NC_001430 vertebrates,human 8 Picornaviridae,Enterovirus,Enterovirus D — JX101846,EF107098, JXQ70222,AB601883, AB601884,AY426531 ,AB601885,AB60188 2 Human enterovirus 69 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY302560 Human enterovirus 70 NC_001430 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus D — DQ201177 Human enterovirus 71 NC_001612 vertebrates,human 281 Picornaviridae,Enterovirus,Enterovirus A — DQ341365,JX244183 ,AB575917,HQ88218 2,HM053669,AF1363 79,GU396280,JX678 880,HM245928,GQ23 1931,HQ647177,GU3 66191,JQ074188,AB4 69182,EU414333,GQ 231928,JX678885,JF 820315,JQ639384,JX 111890,AF176044,D 0341362,HQ891928, AB550336,HQ647171 ,HM807310,EU86450 7,JQ074190,EU4143 35,FJ194965,JN9646 86,JX678875,FJ6064 48,JX678886,EF3735 75,HQ694986,HM002 486,GU198368,JX24 4182,GQ231925,JQ2 80307,HM002489,FJ 828519,JQ708209,G 0279369,FJ607338,J X986738,AB575935,J N992285,JX111891, GQ231934,HQ32585 2,AB550339,HQ8919 23,JN020147,HQ423 142,JQ319054,HQ64 7170,JF738002,JN99 2284,GU459070,JQ7 36684,JX678879,HQ 694982,FJ607334,JX 678883,HQ647176,H 0647169,AB575936, AB575913,GU198367 ,JX111893,EU376004 ,FJ606449,DQ381846 ,AM396586,JF738001 ,GU198369,EU70381 4,AM396587,JN2560 64,JQ708210,AF3044 57,JX244186,HQ891 925,HQ828086,GU19 8370,AB575928,EU3 76005,JXQ25561,JX1 11892,JX678874,FJ6 06450,HM053671,HQ 647174,JQ950555,AY 465356,AB550333,H 0647179,JN544419, AB575937,EU414334 ,HQ647175,HQ64716 8,AB575914,JX67888 2,HQ891927,JX9867 39,GQ231936,FJ360 546,HM003207,JN99 2283,GQ994990,U22 521,AB575918,DQ34 1364,JF738000,HQ18 8292,AB575915,AM3 96588,EU812515,FJ6 07336,GQ231932,JQ 639383,HQ647172,E F063152,GQ231927, JXQ17384,AB550335, JN256060,AB469183, AB550341,U22522,H 0891926,HM002487, HQ647178,JX678877 ,GQ231942,AB57591 1,FJ158601,AF30445 8,DQ341363,HM0024 84,HM245927,AB550 340,DQ060149,DQ34 1358,FJ713137,GQ9 94991,JN256059,HQ 426649,AB550337,A B575916,AF119796,A B575941,JN992282,H 0129932,HQ825317, JX111888,DQ341367 ,FJ606447,HQ694983 ,JX678884,GQ89283 0,JN256061,FJ17215 9,AB575912,HM0024 85,AB575939,JQ6812 18,FJ158600,FJ6073 35,AB575927,JF8300 07,JN001860,DQ341 357,AM396584,AF30 2996,AB575948,GQ2 31930,JF820314,AM3 96585,FJ360544,AJ5 86873,JX678881,HQ 407557,DQ341368,J N256063,HQ891929, JX244187,JF894382, HQ891924,JQ742001 ,DQ341359,GQ99499 2,AF304459,JQ31663 8,AB575942,HQ1893 92,DQ133459,GU198 371,JN052925,JQ074 189,JN256062,JQ806 378,HM053670,GQ23 1929,AB204853,JF82 0316,JX678876,JQ07 4187,EU703812,FJ60 7337,HM002488,EF3 73576,AB482183,HQ 694985,GU459071,J XQ25559,JF894381,H 0998852,GQ231926, FJ194964,AF119795, GQ994989,DQ13345 8,FJ360545,HQ71202 0,JQ742002,GQ2793 70,AB550334,GU196 833,JF820313,DQ341 360,AB550338,JN835 312,JF894383,JX678 878,HQ611148,GQ23 1941,JX986737,GQ2 31933,HQ647180,DQ 341355,EU364841,K C109780,AB575938, DQ452074,GQ23193 9,GU434678,DQ3413 61,HQ423143,GQ231 940,GQ231935,HQ69 4984,JF913464,EU70 3813,DQ341366,JX2 44184,AB204852,FJ4 61781,JX244185,GQ 994988,HQ647173,E U414331,GQ231938, AB550332,JN544418, HQ647167,JQ804832 ,AB575923,GQ23194 3,GQ231937,JX1118 89,FJ439769,DQ3413 56,JF820312,DQ3413 54,KC414134,EU131 776,JF799986 Human enterovirus 71 NC_001612 vertebrates,human 1 Picornaviridae, Enterovirus, Enterovirus A — HQ400942 HZ08/Hangzhou/2008 Human enterovirus 74 NC_001472 vertebrates,human 2 Picornaviridae, Enterovirus, Enterovirus B — JQ397329,AY556057 Human enterovirus 75 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY556070 Human enterovirus 76 NC_001612 vertebrates,human 2 Picornaviridae, Enterovirus, Enterovirus A — JF905564,AY697458 Human enterovirus 77 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY843302 Human enterovirus 79 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — AY843297,AB426610 Human enterovirus 80 NC_001472 vertebrates,human 2 Picornaviridae, Enterovirus, Enterovirus B — JX644073,AY843298 Human enterovirus 81 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY843299 Human enterovirus 82 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY843300 Human enterovirus 83 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY843301 Human enterovirus 84 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — DQ902712 Human enterovirus 85 NC_001472 vertebrates,human 6 Picornaviridae, Enterovirus, Enterovirus B — AY843303,JX898905, JX898908,JX898907, JX898906,JX898909 Human enterovirus 86 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY843304 Human enterovirus 87 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY843305 Human enterovirus 88 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AY843306 Human enterovirus 89 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AY697459 Human enterovirus 90 NC_001612 vertebrates,human 6 Picornaviridae, Enterovirus, Enterovirus A — JX390655,AB192877, JX390654,AY697460, JX390656,AY773285 Human enterovirus 91 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AY697461 Human enterovirus 92 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — EF667344 Human enterovirus 94 NC_001430 vertebrates,human 2 Picornaviridae, Enterovirus, Enterovirus D — DQ916376,EF107097 Human enterovirus 96 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — EF015886 Human enterovirus 97 NC_001472 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus B — AY843307,AB426611 Human enterovirus 98 NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AB426608 Human enterovirus 99 NC_002058 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus C — EF555644,JF260926 Human enterovirus A NC_001612 vertebrates,human 9 Picornaviridae, Enterovirus, Enterovirus A — HQ456312,HQ45630 7,HQ456313,HQ4563 08,HQ456306,HQ456 309,HQ456311,HQ45 6310,HQ456305 Human enterovirus B NC_001472 vertebrates,human 6 Picornaviridae, Enterovirus, Enterovirus B — AY896765,EF371880, AY896762,AJ493062, AY896763,HM185056 Human enterovirus C NC_002058 vertebrates,human 22 Picornaviridae,Enterovirus,Enterovirus C — HQ738302,HQ73830 1,HQ738290,HQ7382 86,HQ738291,HQ738 298,JX393301,HQ73 8294,HQ738297,V01 149,HQ738300,HQ73 8296,HQ738299,HQ7 38293,HQ738288,JX 393302,HQ738289,H 0738292,HQ738287, HQ738303,AB205395 ,H Q738295 Human enterovirus C104 NC_002058 vertebrates,human 7 Picornaviridae,Enterovirus,Enterovirus C — JX982256,JX982254, JX982253,JX982255, JX982259,JX982258, JX982257 Human enterovirus C105 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — JX514943 Human enterovirus C109 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — GQ865517 Human enterovirus C116 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — JX514942 Human enterovirus C117 NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — JX262382 Human enterovirus C118 NC_002058 vertebrates,human 3 Picornaviridae,Enterovirus,Enterovirus C — JX961709,JX678288, JX961708 Human enterovirus C96 NC_002058 vertebrates,human 5 Picornaviridae,Enterovirus,Enterovirus C — HQ415759,FJ751915, FJ751914,KF495604, HQ415758 Human enterovirus C99 NC_002058 vertebrates,human 7 Picornaviridae,Enterovirus,Enterovirus C — KF129411,EF015012, KF129412,EF015011, EF015010,EF015009, EF015008 Human enterovirus D NC_001430 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus D — DQ0820 Human enterovirus NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — AY876913 Hangzhou13-02 Human enterovirus NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — AY876912 Ningbo3-02 Human group 1 NC_005831 vertebrates,human 1 Coronaviridae,Alphacoronavirus,Human — AY518894 coronavirus associated with coronavirus NL63 pneumonia Human herpesvirus 1 NC_001806 vertebrates,human 8 Herpesviridae,Simplexvirus,Human — KF498959,JQ673480, herpesvirus 1 GU734772,X14112,F J593289,GU734771,J N555585,JQ780693 Human herpesvirus 2 NC_001798 vertebrates,human 2 Herpesviridae,Simplexvirus,Human — Z86099,KF781518 herpesvirus 2 Human herpesvirus 3 NC_001348 vertebrates,human 47 Herpesviridae,Varicellovirus,Human — DQ479962,JN704700 herpesvirus 3 ,DQ479956,DQ45205 0,JN704703,JN70470 5,JN704708,KC84729 0,JN704698,DQ0083 54,AY548171,JN7046 91,JN704695,AB0979 33,DQ674250,DQ479 961,JN704709,JN704 694,DQ479959,JN70 4710,JN704690,DQ4 79958,DQ479957,JN 704706,JN704704,D 0008355,JN704696, KC112914,DQ479954 ,DQ479953,JN70469 7,JN704701,DQ4799 55,EU154348,DQ479 960,JF306641,DQ479 963,JN704699,AB097 932,DQ457052,JN70 4707,JN704692,AY54 8170,JN704702,XQ43 70,AJ871403,JN7046 93 Human herpesvirus 4 NC_007605 vertebrates,human 5 Herpesviridae,Lymphocryptovirus,Human — AJ507799,KC207813, NC_00933 herpesvirus 4 KC207814,AY961628 4 ,KF373730 Human herpesvirus 5 NC_006273 vertebrates,human 46 Herpesviridae,Cytomegalovirus,Human — JX512200,GU179290 herpesvirus 5 ,GU179291,GQ22197 4,FJ527563,GU93774 2,GQ396662,KC5193 19,GU179001,AC146 999,JX512204,GQ22 1973,KF297339,JX51 2205,AC146906,JX51 2199,HQ380895,GQ2 21975,GU179288,JX 512203,AY315197,JX 512202,KC519321,FJ 616285,JX512197,G 0121041,EF999921, AC146851,JX512208, KC519323,JX512201, AC146904,AY446894 ,JX512206,JX512207, GQ466044,AC14690 5,KC519320,GU1792 89,GQ396663,GU980 198,X17403,KC51932 2,JX512198,AC14690 7,KF021605 Human herpesvirus 7 NC_001716 vertebrates,human 2 Herpesviridae,Roseolovirus,Human — AF037218,U43400 herpesvirus 7 Human herpesvirus 8 NC_009333 vertebrates,human 3 Herpesviridae,Rhadinovirus,Human — AF148805,HQ404500 herpesvirus 8 ,JQ619843 Human herpesvirus 8 type NC_009333 vertebrates,human 1 Herpesviridae,Rhadinovirus,Human — GQ994935 P herpesvirus 8 Human immunodeficiency NC_001802 vertebrates,human 1815 Retroviridae,Lentivirus,Human — K02013,DQ676887,E virus 1 immunodeficiency virus 1 U697905,GQ372988, AF408631,AF042103, EU110097,DQ020274 ,AB253705,DQ39638 0,DQ314731,AY7795 51,KC899015,FJ6234 91,FJ670519,GU7337 15,AF069140,AB2536 90,AB253679,KC156 213,AB253676,EF637 057,U63632,FJ62349 4,FJ771010,DQ16410 5,GQ999983,AF4430 76,AB253686,AB231 898,AF119820,KC89 8978,AY819715,FJ49 6163,JX574663,AF25 6211,AF107771,KC1 56129,U69585,EF495 062,AB231896,GQ99 9973,DQ487190,AB0 98331,EU110085,AF 490974,AY771591,E U293450,EU735535, AY586542,AB565503 ,AB287003,AB25370 7,AY463229,AF25995 4,AB286863,EF36312 5,AY352655,DQ3512 22,AB565500,DQ011 177,AY331293,FJ495 822,AY536235,AY30 8762,AJ251056,FJ49 5826,AY586544,FJ49 6085,U69589,AB2868 57,FJ623482,EF1783 66,AF197338,FJ4960 82,AY463235,AY835 758,EU616643,AB25 3693,AY878055,AF11 0966,JF804806,KC89 8993,AB287370,AY9 00572,DQ164121,EU 697906,EU735536,A B287363,DQ853445, FJ185228,KC898988, AY455785,AF075701, KC156218,HM02646 0,EU110086,FJ49594 1,AF005494,AY12589 4,DQ886033,KC8989 76,AB485656,DQ093 591,JX503074,GU36 2013,FJ670525,AF06 7157,DQ207943,U69 586,AB254154,FJ185 238,AY560108,AY90 1971,KC522034,AF1 10961,AY835761,DQ 358799,AB565502,E U786675,AY771589, AF190127,AB253640, DQ445635,EU735539 ,AJ291718,DQ36997 7,EU743964,GU7337 13,AF067155,AY7811 27,DQ396386,AF443 077,FJ496189,FJ623 485,FJ496156,KC503 855,DQ853451,AB25 3421,FJ670516,DQ85 4716,AF450098,EU1 10092,EU786680,DQ 351217,EF514699,AF 067159,DQ351231,A Y771593,AY878064, EU697904,AY835763 ,GU647197,GQ36565 2,AB565504,U51190, AY586546,FJ623493, U39362,EU786673,D 0295195,AY463236, AJ866555,AY835751, AB286956,AY586545 ,FJ496074,EU697908 ,A07867,DQ886036,D 0912822,AF119819, AF423756,DQ358808 ,DQ396384,AB25370 6,AY945709,DQ3963 69,AY314046,FJ8646 79,GQ999975,AF289 548,FJ853622,DQ990 880,AY970950,AB73 1663,FJ496076,DQ39 6382,AB428555,AB7 31665,AY586548,AF4 08630,JQ341411,KC 156215,EU110087,K0 2007,AY455779,AF44 3074,AJ276595,FJ67 0531,DQ164116,FJ18 5245,DQ007903,AF0 69671,AY968312,EU 446022,AY455782,FJ 195091,AY332236,A B253712,AY771588, AB253644,DQ164110 ,FJ460501,DQ164112 ,AY779558,AB25364 9,DQ054367,AY9005 75,AY772692,JX5030 75,AY901980,AB231 895,FJ623479,GU177 863,KC899011,FJ496 200,AY463233,HM02 6459,JQ316136,AY00 8714,FJ185254,GU73 3714,DQ358802,AF4 84515,D10112,DQ88 6034,DQ351221,AF4 43099,AB253681,AY 093605,AY773338,FJ 496214,DQ093585,A F107770,DQ085872, KC899007,DQ396400 ,AB098332,DQ85344 1,FJ496194,AB28737 7,AB253714,DQ8534 38,AF443092,FJ6234 77,FJ185239,AB2873 67,XQ1762,AF110974 ,DQ351235,DQ32223 9,DQ085875,AF1109 75,AM000054,AP005 206,FJ496181,AY835 773,GU647196,KC15 6126,DQ853465,HM4 69972,JX503080,DQ 396364,AF197341,JN 860764,AY818644,FJ 195088,AF443107,FJ 670521,DQ295193,FJ 496151,AB480301,D 0853455,AB746345, AB097868,FJ496183, AY772535,DQ056418 ,AY835770,EU00050 7,DQ676871,D86068, AB485639,AF411967, JQ316130,AB485657, AY314053,AY901976 ,KC898984,JX503076 ,AB286856,EF363124 ,AF075702,AY423384 ,AF290028,FJ496191 ,AY779560,EU03191 3,DQ369997,AF2895 50,AY773340,AF0421 02,AF061642,AF0043 94,EF545108,EU786 671,AB254147,FJ496 193,AY322190,AY87 8067,FJ185233,FJ49 6147,FJ460499,DQ35 8801,AJ866554,AF11 0959,FN392874,U211 35,AB253429,AB565 498,EU000511,KC89 8985,GQ999974,AB0 97867,AY835778,FJ1 85255,FJ495823,AF4 60972,AB253653,U43 141,FJ185249,JF804 808,AF192135,AF110 971,FJ496213,AB253 657,M38429,AB4800 48,AB485637,DQ056 407,FJ213782,AB485 635,GU237072,DQ85 3450,KC898979,M22 639,DQ295194,FJ495 938,AB253674,DQ44 5632,EU000510,DQO 56410,AY585264,DQ 854715,FJ496166,AB 480695,DQ886032,A Y314057,DQ676882, AY900571,FJ496202, AY008717,AB547464 ,AY037282,FJ185244 ,DQ164120,AJ24548 1,KC898991,AY1698 14,U46016,AF184155 ,KF766537,GU59514 9,AY838567,HM4699 74,AY331296,DQ369 979,GQ175881,GQ99 9981,EU110094,FJ49 6199,U88826,AY4632 27,AY500393,FJ4959 42,DQ164117,FJ6471 45,AB253721,DQ445 634,AY772691,KC89 8977,AF110960,AJ25 1057,DQ351234,AY9 00574,EU000516,EU 293444,AB253719,A Y771590,AY773339, AF286365,DQ358812 ,EF029067,DQ85471 4,FJ495824,DQ35880 9,FJ496212,AB25369 2,DQ351232,AB2536 62,FJ496003,EU6166 39L31963,AY169807 ,AF067154,U51188,A Y585265,AF443083,A F286236,FJ185259,G 0999980,DQ853457, FJ670515,DQ396396, AB253684,AY322193 ,AY586543,AY83576 5,U71182,KC898982, DQ369998,DQ36998 3,DQ358800,JX5030 82,FJ623484,AY9019 74,AJ866553,AB2870 04,AJ508597,AB4800 47,FJ496073,AB4856 53,DQ369996,AF484 480,AY838565,AP00 5207,AB253697,DQO 11178,AY463217,AB 253659,HM026455,A Y772700,AJ288981,A F450097,KC156115, DQ369978,AB428557 ,AY331297,JQ316127 ,DQ396371,FJ623492 ,A07116,EU293445,K C156220,AF082394, AF443103,AB253685, EU293448,DQ676874 ,AB253638,AY87805 9,AY049711,AB6049 47,FJ496206,HM026 457,FJ670523,FJ670 522,AB547463,AF443 105,AB070353,AY31 4052,FJ496075,AY77 2696,KC898996,DQ8 53456,AB641836,AY 237167,FJ496148,KC 898992,AY623602,A B221125,AB253708, AY682547,AF423760, EF178405,AY835771, AF484485,AB428560, AF286223,FJ195089, AF516184,EF637055, AY779550,AB485660 ,AF538303,FJ185232 ,DQ164118,AB48564 4,AB070352,KC5038 53,DQ093607,AF042 104,DQ314732,DQ05 6414,FJ185235,DQ82 3367,EU786674,AB7 31669,FJ195087,FJ1 85260,GQ372986,AB 287372,AB480697,D 0445633,AB287379, AY445524,FJ185234, AY169810,DQ396370 ,FJ185230,DQ011180 ,AF110969,FJ213780 ,AB253673,AY83575 6,AF443082,DQ0936 01,AB485659,GQ845 125,AF443108,AY314 055,AF538302,EF178 323,AB286850,AY83 5779,DQ351237,DQ3 66662,DQ093589,FJ4 96006,AB480045,AB 253694,AB253431,D 0351219,EF514713, KC156127,GQ99999 0,AF179368,GQ8451 26,DQ093590,EU735 540,DQ207942,AY42 3381,DQ853439,AB0 98333,M17451,FJ495 820,DQ853460,AB25 3639,JQ316126,AY46 3222,FJ496198,AF45 0096,EU000509,AY4 63224,FJ496081,AY8 78068,KC156118,EU 000512,EF514711,AF 443097,AF286237,AB 253672,U51189,DQ3 66665,AY536233,EF6 37056,FJ496164,DQ8 53448,EF637048,FJ4 96178,FJ670518,AY8 35757,DQ366659,AB 485633,AY167123,FJ 496171,AF110970,EF 514704,AB286859,D 0396391,DQ351236, AF408628,EF637050, AY322189,AY169813 ,EU884501,M62320,A Y173955,AB485655, AB220947,KF766538, AY423383,AF004885, AY046058,AJ320484, AF443115,AY227107, EU786670,DQ396393 ,AB253656,L20571,A F193253,JQ316132,A Y352657,JQ429433,A JQ06022,DQ853436,F J771006,EF363127,A Y901966,DQ093592, FJ496195,AB746343, AF110978,DQ164104 ,AY314056,AB42855 4,EF637054,AB25368 8,AB254153,XQ4415, AY835774,AB253720 ,GU595154,AB28736 8,AJ404325,AB42855 3,EU000514,FJ49615 2,AY751407,FJ67053 0,DQ085876,DQ6768 77,FJ711703,AY0497 09,JQ316134,AF4086 27,FJ496197,U37270 ,AB253677,AY32219 1,FJ670524,FJ49618 5,DQ912823,AY4632 21,AF460974,AY7726 99,AB646691,DQ396 378,AB253647,AB25 3682,EF514710,AB48 5662,DQ396385,DQ8 45388,Z11530,AB220 946,AB253703,FJ195 090,AY878057,AF193 275,AY772695,AY83 5754,EF192592,EF51 4712,GU595158,AB2 53652,AF110963,KC 156119,EF368372,FJ 623495,EU616649,A F443084,AB253699,A F385935,KC898986, AB286854,AB254156 ,FJ623480,DQ396388 ,AB254155,AB48564 5,DQ358811,AY9019 65,AB480694,AY173 957,DQ351238,AF28 6238,DQ351223,AB2 53716,AY455784,EU 448295,AB287371,AF 443112,AB480698,FJ 213781,AY162225,A Y352654,AB485663,F J771007,AB253423,A B253671,AB253635, AY532635,AY835769 ,AB485651,AY87806 5,AB254149,DQ3512 30,AB253687,AY536 237,EF637053,JN860 767,EF091932,AB604 951,DQ358805,AY90 1975,AJ271445,U346 03,K03454,U26546,A B746342,FJ496160,J X503073,KC899009, AF086817,AF286235, FJ495819,AF443086, K03455,AY835767,E U786672,AB220944, FJ623476,GQ999985 ,EF514708,AB286849 ,AY586540,DQ05640 4,DQ396398,AY4557 81,M17449,AB48564 1,AB485634,KC1561 21,AY314049,AF4431 11,KC522033,AB286 860,KC156120,DQ09 3597,DQ164122,AY5 35659,AY331289,AY 560109,DQ230841,K C935957,DQ445637, AF443089,EF192591, AB731667,EU110088 DQ093596,EU78667 8,AB604949,HM4699 83,EU616642,DQ093 600,AY585268,EU61 6641,AY463223,AB2 54143,DQ853454,AY 838568,FJ623488,DQ 853447,AY322187,D 0011175,AY818643, AF164485,HM215250 ,DQ056411,AY33128 2,AB731666,AB2536 37,AF224507,DQ011 165,AF443088,KC89 8975,AB253670,AB2 86862,AB286861,AF4 43079,FN392876,DQ 886031,KC852172,A Y703910,DQ093606, FJ771008,DQ853458, AF443075,DQ487191 ,AB287364,AF490973 ,AY779559,HM02645 6,HM469981,GQ9999 78,AY169808,AY423 385,AY901979,AY35 2656,HM776939,AY8 78060,AY772693,AB 485642,AY901967,A B731670,AY878054, DQ445636,KC898983 ,AF423755,AB428556 ,AB480692,AY53111 6,AY781126,AF44308 7,GQ372989,AB2211 26,AF110976,AY3140 61,AY049710,AB097 ,869,DQ396394,AY31 4054,GU595153,FJ49 5937,FJ496174,AB28 6853,JQ316128,AB56 5501,AB253709,AB0 97866,AY835759,GQ 999991,DQ295192,D 0093602,AF377958, AB485654,AF443114, AJ866558,AY162224, DQ085867,AB480044 ,AB485647,DQ16412 9,AF321523,AY16222 3,AB746344,GQ1758 83,AY455780,FJ1852 58,AB289589,M2732 3,HM026458,AF4845 11,AF286227,AB2536 89,HM776938,AF290 029,DQ383750,FJ496 170,KC156130,U867 80,AY314063,AB254 142,FJ185246,AF110 980,FJ496157,U8882 3,JF804810,AB25364 8,M15654,DQ853443, FN392877,EF036527, ,AB253643,FJ460500, GQ999979,GQ99998 6,FJ185240,KC85217 4,AF361873,AB25366 9,AF411964,AB42855 8,M38431,AB485648, AB253723,DQ234790 ,DQ164113,FJ185236 ,AB485632,AB09787 1,AY173951,KC5038 52,AF005495,EF0365 31,DQ396399,FJ4962 07,EF420986,AY3140 62,EF175209,JQ3161 31,AF443085,FJ8536 20,EF036532,AF4430 90,DQ396372,AM000 055,AB052867,AB48 0300,AB253651,DQ1 64114,AY835762,AB 289588,AB253717,AJ 276596,AF256205,E U697909,AB253658, AY818641,EU031915 ,AF256206,DQ16410 9,EU000513,AB4856 66,DQ859180,AB254 ,141 ,GQ372987,AF40 8629,AY588970,DQ1 64127,AY158534,FJ4 95943,DQ837381,DQ 358803,FJ623481,EU 293446, AB231897, AF 110977,DQ011179,A B220948,FJ496001,F J185229,AF407418,A F413987,AY835780,E U786681,AF385934, KC156221,AY838566 ,AB428551,AY87806 6,FJ185253,AB48566 7,DQ396389,GU1115 55, AY314059,DQ093 593,AY901977,AF457 058,AY237165,DQ09 3587, AJ 508596,FJ18 5250,AF256207,AJ86 6557,FJ670527,AF04 9495, DQ011166,K02 083,FJ496188,AY703 908,AY835749,KC89 9014,KC156217,DQ3 69993, AF110964,AY7 51406,FJ496000,KC8 ,99012,DQ369995,DQ 354118,DQ853452,D Q396387,FJ496149,A Y008718,EU786677, DQ396377,AY331283 ,AB023804,AF110981 ,EF514707,DQ35123 3,KC156216,AY5865 47,U34604,AB287369 ,U23487,AY779557,F J496175,AB253428,E F078278,AB049811,F J623475,DQ676878,F J670517,DQ886037, AB253691,L39106,A B253680,EU000515, AB485661,DQ978981 ,EU547186,DQ16410 6,DQ853449,DQ6768 80,AF443080,EF4209 87,AY463230,AB253 636,KC898987,AF07 7336,AB604950,EF63 7046,AF082395,AY90 1978,AF003887,KC1 56123,AY586549,AY 878063,AY463228,EF ,029069,AB097865,A Y901969,JX503072,A F286229,AY331292, DQ351228,GQ99998 2,DQ164111,DQ0858 70,KC899013,DQ011 173,AJ271370,AY901 968,FJ853621,KC156 125,FJ496159,AY173 954,AY835777,DQ85 3440,AF443110,AB25 3665,AY169803,AY8 35750,FJ496187,DQ3 51218,DQ011171,HM 469982,KC156124,E F637051,EU110095, EF368370,AF110962, GU595151,EU786676 ,AY173953,AY83577 2,AF042101,DQ4456 31,AB254144,EU616 645,DQ093594,AY87 8070,GU595150,AF0 42106,JN571034,FJ4 96184,AY082968,GU 595155,HM215252,G 0999976,AY314045, ,AF290030,AY423386, AB289590,AF423758, JN188292,AY463219, DQ351224,AB485638 ,AJ508595,AY118166 ,AF289549,JN860769 ,AB564746,EF363126 ,DQ396373,KC15611 6,AF067156,KF76654 1,FJ185243,AF06164 0,AF067158,AB25415 2,JX574661,HM4699 75,AY331288,EF0365 29,AB286851,EF5146 98,AB253425,KC492 738,AF443104,KF766 542,AB286864,FJ623 490,DQ853453,EU00 0508,DQ011172,KC1 56211,DQ369990,FJ1 85237,AY169816,DQ 396392,AY779556,A B480299,AY805330, HM469980,AY901973 ,KC156212,AF28623 1,AY779553,AF41196 5,DQ351216,EU2934 ,47,DQ007902,DQ007 901,AY779564,FJ185 257,AB253424,U6959 0,AB428559,DQ1641 15,AB485650,EF0782 79,AB485643,AY779 561,AF049494,AF407 419,DQ295196,AF07 5703,AY772694,AY0 74891,AB253663,AF0 76475,U12055,GQ99 9988,EU110089,DQ3 96365,AJ237565,EFS 14700,AJ239083,AF2 86226,AY560110,GQ 372990,AF286232,L0 2317,AB253426,DQ3 51227,FJ496196,DQ9 79024,AB731664,AY 463226,EF036533,D 0853464,DQ011169, AF414006,AB485664, FJ670526,AB253713, AY352275,FJ185248, EF363122,AB254148, FJ496158,DQ396366, JN860768,AY901972, ,FJ496208,M93259,D 0369991,GU595157, AB253642,AY158533 ,EF029066,AB253655 ,DQ487189,AY77269 8,EF514702,AY53623 4,KF766540,HM2152 49,DQ369981,FJ1950 86,AY771592,FJ4960 72,DQ369986,FJ4961 53,AF286233,EU693 240,FJ496007,FJ496 079,JN860766,FJ771 009,FJ496080,JX503 081,D86069,AF11097 3,FJ185252,U52953, FJ623489,AY169805, DQ369994,AF443109 ,AF468970,JN860762 ,U54771,DQ351229,A F063224,AY093603, DQ369982,FJ623486, AB097870,FJ496192, EU616640,AY093604 ,DQ093599,AB64183 7,AB032740,DQ3699 84,FJ213783,EU2206 ,98,GQ365649,AF443 081,AY118165,FJ185 241,GU207884,KC89 8994,AB253702,AB7 31668,FJ495939,AY1 73958,FJ496169,AY5 85267,FJ496083,AB4 85669,DQ056408,FJ3 58521,FJ185231,AB2 87378,KC522032,AY 455783,KF766539,D 0358806,DQ369976, EF368371,AB254150, AF286225,AF061641, DQ093586,AB253427 ,DQ487188,AB25370 4,AB097872,AF11096 8,HM469977,GQ1758 82,DQ369988,FJ4962 01,AY900576,EU735 538,DQ017382,AY33 1284,AB253667,AY4 63218,AY463237,FJ4 96005,EF036534,AY8 78058,EF036536,AB5 65496,AY835748,AB 253432,AB564745,AF ,443096,HM469973,A Y970946,EU110090, DQ853444,AF197339 ,KC522031,FJ496190 ,AB646289,EF514701 ,AB287376,AY97094 7,FJ496176,DQ01117 0,DQ085873,DD4099 79,AY331286,EF0365 35,DQ859178,GQ999 989,AY618998,AY97 0949,AB221005,AB0 98330,U69591,DQ01 7383,U69584,AY6126 37,JF804807,DQ8534 37,U26942,FJ495818 ,FJ496177,KC899006 ,EU786679,AY00871 5,AB286852,AY5362 36,AY560107,AB485 668,HM469978,AY17 3956,AB253668,DQO 93598,DQ164108,DQ 396381,JX503071,FJ 496146,DQ093595,L2 0587,AF193277,AF07 5719,DQ011167,JF80 ,4813,AY586541,FJ49 6204,AY158535,JF80 4812,AB097873,EU0 31914,AY901970,AY 878056,AB254146,AF 408626,FJ185242,DQ 366666,JQ316138,D 0164124,AB480696,J X503078,AB253422, AY703909,AJ866556, DQ396390,AB253641 ,AY314050,FJ496150 ,DQ358804,AB28958 7,KC156219,GQ9999 77,JX503083,FJ6234 83,GQ290462,EU293 449,U69587,JN86076 3,DQ056416,AB2536 61,AY314058,AB287 365,DQ164125,AY77 9554,GQ845124,AB4 85652,DQ093605,AY 835781,AF259955,K C852173,GU733717, U88825,AB052995,A Y169802,AY772690,F J496168,KC156214,F ,J496155,U69588,AB2 86855,KC935959,DQ 400856,JN860765,KC 156114,FR846409,A Y169806,AF286239, GQ999987,AB231894 ,DQ853462,GQ27761 0,AJQ06287,DQ0564 13,AY463232,AF4430 78,AF332867,DQ676 886,AY169809,AF064 699,DQ366661,AB56 5497,FJ496154,AMOO 0053,AF529572,KC8 99008,AB565499,EU 110096,AB220945,FJ 496004,AY835775,F R846408,DQ164107, AY773341,AB253664 ,DQ676875,FJ185256 ,HM215251,DQ85346 1,AY423382,AB2537 15,U88822,EF637052 ,DQ354116,GQ36565 1,DQ056412,AF0421 05,DQ366663,AY878 062,EF175211,EF175 ,212,FJ495825,DQ085 871,AY228557,FJ496 161,AF443098,JQ316 133,AY308761,DQ39 6383,JX574662,EU88 4500,AY314060,AY2 71690,EU616644,GQ 999972,M26727,AB2 53683,EU743963,GU 647198,FJ496084,AB 485665,FJ495821,JF 719818,GU595148,D 0676870,EU697907, JN860761,GU230139 ,AB604948,AY83576 6,AF070521,FJ49621 0,FJ496078,EF17521 0,AB253650,AF44310 2,AY169812,DQ3699 85,DQ358807,FJ4961 79,AY535660,AY835 753,AY314044,JF804 814,AB480693,AF443 093,AJ288982,AF385 936,EF514705,AY818 642,AF443100,AY463 225,U69592,EF63704 ,7,AJ302646,GU2301 37,U69593,DQ09360 4,AB564744,AF41196 6,AB286955,DQ0564 09,AY779555,AY835 760,EU110093,AB25 3701,JQ316129,DQ6 76879,KC898990,AB 253654,JF719819,AF 443094,EF514697,AY 779563,DQ369980,A B286858,AB253696, EF514703,DQ979023 ,EF633445,AF529573 ,AF076998,AF530576 ,AF286230,AY308760 ,FJ670520,AY779552 ,DQ676872,FJ623478 ,AF005496,AB428562 ,AY322185,AB25343 0,AY835764,AF06322 3,DQ085869,AY4557 78,DQ351220,AY008 716,AY314051,AY33 1285,DQ886038,DQ3 69987,KC492737,AY 878071,HM469979,A ,Y322184,DQ366664, KC898989,AF503396 ,FJ496162,AB253695 ,FR846410,DQ39637 4,FJ496203,AB56547 8,DQ056417,AY9019 81,EF029068,AB2536 75,DQ354123,KC914 396,FJ185247,AY781 125,DQ164123,DQ39 6397,EU110091,AF1 10967,AJ291720,FJ6 23487,AB254151,AF4 43113,AB253724,FJ4 96173,FJ670529,AY8 78072,AB253711,AB 604946,KC156128,A B428561,DQ369992, DQ056405,A04321,A F133821,DQ164126, FJ496002,DQ845386, DQ676873,DQ84538 7,AB078005,FJ49618 0,AF286234,EF63704 9,A34828,DQ083238, AF003888,AF110979, AF443101,JQ316135, ,FJ670528,DQ093603, AB485658,AB253722 ,AJ302647,DQ05640 6,HM100716,AF2862 24,KC156117,AY331 290,DQ676884,AY88 2421,AY169804,DQ8 53442,EF363123,AB2 53700,DQ396375,M9 3258,EF057102,AY33 1287,DQ396367,AF2 86228,EF036530,FJ4 96145,AB485649,AF0 33819,EF178358,KC 156210,DQ164119,A F197340,AB480046,E U541617,KC503854, DQ085874,AF408632 ,KC898981,GU59515 9,EU448296,AY1739 52,AY169811,M1992 1,JQ316137,AB25367 8,KC156122,AB2536 98,EU000506,FJ4961 72,AY463231,DQ011 174,GQ999984,A071 08,AY878061,AY180 ,905,AB253660,U4309 6,EF514709,AB25371 0,DQ396368,EU8619 77,DQ853463,DQ853 446,AY314048,JF804 805,DQ676883,DQ36 9989,GU733716,AY4 23387,FJ496165,DQ3 58810,AB480298,AF4 23757,AB565495,AY 585266,AY228556,A B287366,DQ366660, AB253725,AB032741 ,GQ365650,AY83575 5,DQ676885,JF80481 1,DQ011168,KC8989 95,AB485646,AY237 166,EF469243,AB253 666,FJ496167,AY463 220,AY169815,AF316 544,AB253718,AF290 027,AB231893,DQ39 6376,JX503077,FJ49 6182,FJ495940,FJ49 6211,DQ011176,HM4 69976,DQ676876,FN 392875,AF492624,H ,M067748,AB565479, DQ859179,DQ85345 9,DQ383746,DQ3512 25,AB485640,AF1109 65,JF804809,EF5147 06,FJ496209,AF0849 36,AF443095,U88824 ,DQ164128,FJ496077 ,AY049708,AY77956 2,AJ291719,AF42375 9,DQ676881,AF4430 91,KC899010,DQ396 395,AB485636,AF076 474,DQ979025,DQ35 1226,AF042100,AB25 4145,AY588971,AY3 14047,AY970948,KC 935958,AY463234,A Y536238,AB253646, DQ056415,FJ185251, DQ886035,DQ09358 8,FJ496205,AF11097 2,EU735537,AB2536 45,AY835776,A14116 ,AB428552,AY70391 1,EF036528,AF49262 3,AY781128,FJ49618 ,6,GU595152 Human immunodeficiency NC_001722 vertebrates,human 41 Retroviridae,Lentivirus,Human — AY509260,M15390,M virus 2 immunodeficiency virus 2 30895,AB499695,AF2 08027,EU028345,AB 485671,JQ4542,U220 47,AB731745,AB731 744,AB485670,AB49 9693,AB731742,AB7 31743,L36874,U3829 3,JQ4498,EU980602, AY509259,AB731741 ,AB731739,L07625,X 52223,AY530889,U27 200,Z48731,M31113, DQ0835,JQ3654,DQ3 07022,XQ5291,AB731 738,AB499694,A0999 5,X61240,AB731740, AF082339,AB100245, E02138,M30502 Human metapneumovirus NC_004148 vertebrates,human 69 Paramyxoviridae,Metapneumovirus,Human — HM197719,KC40397 metapneumovirus 2,DQ843659,KF5301 85,KC403975,KC562 219,KC562222,KC40 3980,KC562228,FJ16 8778,KC562232,KF5 30163,AF371337,KC ,562221,EF535506,K C403982,JN184400,K C403984,KF530165, KC562223,KC562224 ,KC562240,JN184399 ,KC562230,KF53017 8,KF530183,KC4039 79,KF530177,GQ153 651,KC562229,KC56 2241,KC562231,KC5 62234,KC403981,KF 530171,KC403978,K C562233,KF530179, KC403976,KC562238 ,AY297748,KC40397 3,KC562242,KC4039 74,KC562226,KC562 235,KC562244,JN184 401,KF530166,KC56 2239,KC403977,KF5 30167,C0840316,KC 562220,KF530173,KF 530181,KF530164,JN 184402,KC403971,A Y525843,KC562243, KC562225,KC562227 ,AB503857,AY29774 ,9,KC403983,FJ16877 9,DQ843658,KC5622 37 Human papillomavirus NC_016157 vertebrates,human 1 Papillomaviridae,Human papillomavirus 126- — JX413105 like viruses Human papillomavirus NC_019023 vertebrates,human 2 Papillomaviridae,Human papillomavirus 161- — JX413108,JX413109 like viruses Human papillomavirus NC_022095 vertebrates,human 2 Papillomaviridae,Human papillomavirus — JX444073,HG421739 Human papillomavirus NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — EU410347 FA75/KI88-03 lomavirus 2 Human papillomavirus NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — U85660 RTRX7 lomavirus 1 Human papillomavirus NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FN598907 SIBX-3a lomavirus 2 Human papillomavirus NC_005134 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FN677755 SIBX1 lomavirus 5 Human papillomavirus NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FN677756 SIBX2 lomavirus 2 Human papillomavirus NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — HE963025 SIBX8 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FM955839 100 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FM955840 104 lomavirus 2 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FM955841 105 lomavirus 1 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — EF422221 107 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — EU410348 110 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — EU410349 111 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FM955842 113 lomavirus 2 Human papillomavirus type NC_001591 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FJ947080 115 lomavirus 3 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — GQ246951 118 lomavirus 1 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — X74466 12 lomavirus 1 Human papillomavirus type NC_001596 vertebrates,human 3 Papillomaviridae,Betapapillomavirus,Betapapil — GQ845442,JQ963484 120 lomavirus 2 ,JQ963485 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — GQ845444 122 lomavirus 2 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — GQ845446 124 lomavirus 1 Human papillomavirus type NC_016157 vertebrates,human 1 Papillomaviridae,Human papillomavirus 126- — AB646346 126 like viruses Human papillomavirus type NC_017993 vertebrates,human 1 Papillomaviridae,Human papillomavirus type — HM999987 135 135 Human papillomavirus type NC_017994 vertebrates,human 1 Papillomaviridae,Human papillomavirus type — HM999988 136 136 Human papillomavirus type NC_017995 vertebrates,human 1 Papillomaviridae,Human papillomavirus type — HM999989 137 137 Human papillomavirus type NC_017996 vertebrates,human 1 Papillomaviridae,Human papillomavirus type — HM999992 140 140 Human papillomavirus type NC_017997 vertebrates,human 1 Papillomaviridae,Human papillomavirus type — HM999996 144 144 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — X74467 14D lomavirus 1 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — X74468 15 lomavirus 2 Human papillomavirus type NC_021483 vertebrates,human 1 Papillomaviridae,Human papillomavirus type — JN211193 154 154 Human papillomavirus type NC_019023 vertebrates,human 1 Papillomaviridae,Human papillomavirus 161- — JX413104 166 like viruses Human papillomavirus type NC_001596 vertebrates,human 2 Papillomaviridae,Betapapillomavirus,Betapapil — X74469,JN211195 17 lomavirus 2 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — X74470 19 lomavirus 1 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — U31778 20 lomavirus 1 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — U31779 21 lomavirus 1 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — U31780 22 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — U31781 23 lomavirus 2 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — U31782 24 lomavirus 1 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — X74471 25 lomavirus 1 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — U31785 36 lomavirus 1 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — U31786 37 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 2 Papillomaviridae,Betapapillomavirus,Betapapil — JN211196,U31787 38 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — DQ090005 38b lomavirus 2 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — M32305 47 lomavirus 1 Human papillomavirus type NC_001591 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — X74480 49 lomavirus 3 Human papillomavirus type NC_001531 vertebrates,human 3 Papillomaviridae,Betapapillomavirus,Betapapil — M17463,M22961,JN2 5 lomavirus 1 11194 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — D90252 5b lomavirus 1 Human papillomavirus type NC_001591 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — Y15173 75 lomavirus 3 Human papillomavirus type NC_001591 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — Y15174 76 lomavirus 3 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — M12737 8 lomavirus 1 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — Y15176 80 lomavirus 2 Human papillomavirus type NC_001596 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — X74464 9 lomavirus 2 Human papillomavirus type NC_004500 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — AF531420 92 lomavirus 4 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — AY382778 93 lomavirus 1 Human papillomavirus type NC_005134 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — AY382779 96 lomavirus 5 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FM955837 98 lomavirus 1 Human papillomavirus type NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — FM955838 99 lomavirus 1 Human parainfluenza virus NC_003461 vertebrates,human 21 Paramyxoviridae,Respirovirus,Human — KF687315,KF687307, 1 parainfluenza virus 1 KF687312,KF530217, KF687314,KF530205, KF530215,KF687316, KF530212,KF530220, KF687308,KF530202, KF530221,KF687310, KF530203,KF687311, KF530209,AF457102, KF530198,KF687313, KF687309 Human parainfluenza virus NC_003443 vertebrates,human 5 Paramyxoviridae,Rubulavirus,Human — X57559,AF533012,A 2 parainfluenza virus 2 B176531,AF533010,A F533011 Human parainfluenza virus NC_001796 vertebrates,human 47 Paramyxoviridae,Respirovirus,Human — KF530242,KF530231, 3 parainfluenza virus 3 KF530230,KF530228, KF530229,KF530241, KF687355,KF687319, KF687342,KF530234, KF530251,KF530233, KF687338,KF530232, ,KF687317,AB012132, KF687321,KF530257, KF687356,KF687331, KF687350,KF687318, KF530245,KF530225, KF530253,KF530237, KF687341,U51116,E U424062,KF687329, KF530249,KF530252, KF530256,KF687335, KF687336,KF687340, KF530236,EU326526 ,KF687337,KF530243 ,Z11575,KF530247,K F530239,FJ455842,K F687346,KF530250,K F530226 Human parainfluenza virus NC_021928 vertebrates,human 2 Paramyxoviridae,Rubulavirus,Human — KF483663,AB543336 4a parainfluenza virus 4 Human parainfluenza virus NC_021928 vertebrates,human 3 Paramyxoviridae,Rubulavirus,Human — EU627591,JQ241176 4b parainfluenza virus 4 ,AB543337 Human parvovirus B19 NC_000883 vertebrates,human 8 Parvoviridae,Erythrovirus,Human parvovirus — AY504945,FJ591158, B19 AY386330,AY083234 ,AF162273,FN598218 ,FN598217,AB55033 1 Human picobirnavirus NC_007026 vertebrates,human 1 Picobirnaviridae,Picobirnavirus,Human seg. 1 AB186897 , picobirnavirus Human picobirnavirus NC_007027 vertebrates,human 1 Picobirnaviridae,Picobirnavirus,Human seg. 2 AB186898 picobirnavirus Human poliovirus 1 NC_002058 vertebrates,human 126 Picornaviridae,Enterovirus,Enterovirus C — AF111984,KC880377 ,AB180072,AF405667 ,KC880375,AF40568 7,EF682358,AB18007 0,AF405679,AF46241 9,AJ132960,GQ9841 41,KF537633,AY9283 85,AY928387,AF4056 88,KC880382,KC880 370,EF682359,EF682 356,AF405683,FJ769 379,EF682357,AY278 553,FJ859063,AF111 961,FJ859059,EU794 955,AF111982,EF682 345,AJ430385,AF405 666,KC880366,AF40 5673,AF538840,FJ85 9058,KC880368,AF4 05677,EU794961,EF 682355,FJ769380,EU 794960,FJ859062,KC 880379,AF405674,V0 1148,AF111966,FJ76 ,9381,EF682346,AF40 5680,AF405669,KC8 80367,FJ769385,EU7 94962,AF405676,FJ7 69383,AF405668,AF4 16342,EU794954,AF 405689,EU794953,K C880378,AF405671, AY560657,AF458333, AF405682,AF405684, FJ859061,FJ769378, FJ769384,EU794964, EF682343,AF405664, KC880369,AF405678 ,FJ859064,AJ416942, EU794956,EF682348 ,AF538841,AB180071 ,EU794958,KC88037 6,AB180073,KC8803 73,EF682344,AF4056 65,EF682354,AF4056 75,EF682351,AF1119 83,FJ859060,KC8803 71,AF111953,AF5388 43,EU794959,EU794 957,KC880380,AY92 8386,AF538842,EF68 ,2349,KC880381,AF4 05685,EF682353,EF6 82347,EF456706,KC 880372,AF405662,EF 682350,AF462418,AF 405672,AY184219,AF 405670,AF405686,K C880365,EF682352, EU794963,KC880374 ,AF405663,FJ769382 ,AY928383,AJ132961 ,AY928384,AF405690 ,AF405681,AF111981 Human poliovirus 1 strain NC_002058 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus C — V01150 Sabin Human poliovirus 2 NC_002058 vertebrates,human 66 Picornaviridae,Enterovirus,Enterovirus C — JX274984,AY278549, JX275380,AM884185 ,HM107833,JX27508 5,JX275238,JX27514 0,JX275147,HM1078 35,JX275266,AY2785 52,FJ898290,AM0842 24,AM040037,AM884 184,DQ890388,JX27 5184,HM107832,HM1 07834,JX274993,DQ 890387,FJ460224,AY 184220,DQ205099,M 12197,JX274983,AY2 78550,KC784368,DQ 890385,AM084225,FJ 460225,AY238473,A M040039,DQ0625,KC 784367,DQ890386,A Y278551,JX274985,F ,J517649,AM040038, XQ0595,JX275015,A M084223,JX274980, AY948201,AM040035 ,FJ460223,JX274999, JX274991,JX274982, AJ544513,JX275008, JX274995,AY177685, JX275352,AM040036 ,JX274981,AF448782 ,FJ517648,JX275032, JX275071,JX275162, JX274987,AF448783, GU390707 Human poliovirus 3 NC_002058 vertebrates,human 18 Picornaviridae,Enterovirus,Enterovirus C — FJ914252,EF456707, FJ842159,K01392,KC 784372,FJ460226,XQ 0925,FJ842158,AY18 4221,GU180608,GU2 56222,XQ4468,AJ293 918,AF541919,XQ059 6,EU684056,EU6840 57,FJ460227 Human respiratory NC_001781 vertebrates,human 122 Paramyxoviridae,Pneumovirus,Human — JXQ15498,JQ901450, syncytial virus respiratory syncytial virus GU591771,GU59176 8,JX576739,JX57674 ,5,JQ901456,JF92006 5,JQ901447,KF53026 1,JX576750,JX57674 1,JX576742,JX57675 6,GU591769,GU5917 59,JQ901457,JXQ154 99,JX576730,JXQ154 80,KF530268,JX5767 40,JXQ15484,JQ9014 58,JX627336,M74568 ,JX576736,JXQ69803, JXQ69801,JXQ15489, JF920052,AF013255, JXQ15494,JX576738, JX576759,JF920058, JXQ15491,JXQ15496, JQ901449,JXQ15490, JX576751,JXQ69800, JQ901453,KF530269, JF920049,JX576735, JX576733,JQ901448, JX576737,JXQ15486, GU591767,JQ901455 ,JXQ15481,AB846662 ,GU591761,JF920062 ,AF013254,JXQ69798 ,GU591758,JXQ1548 ,5,JX576753,JX57675 7,JX576732,JX57674 9,JX576731,U63644, JX576743,JX576754, GU591760,JXQ69802 ,JXQ69799,JQ901454 ,JQ582844,GU59177 0,GU591764,JX5767 55,JF920053,GU5917 66,JXQ15483,JX5767 46,JX576734,U50362 ,FJ948820,JQ901452 ,JXQ15488,KC978856 ,JX576758,KF530260 ,JF920050,JF920047, JQ901451,JF920046, JF920054,JX576762, GU591762,JQ582843 ,KC731483,AY91126 2,JX576729,KC73148 2,U50363,JXQ15493, JF920057,GU591763, JX576752,JF920059, JXQ15482,JXQ15487, JX576747,JF920051, JX576760,JF920069, AF035006,JXQ15497, ,JXQ15495,GU591765 ,JX576744,JX576761, JF920048,JXQ15479, JXQ15492,JX576748 Human respiratory NC_001781 vertebrates,human 1 Paramyxoviridae,Pneumovirus,Human — U39662 syncytial virus S2 respiratory syncytial virus Human rhinovirus 1 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445111 Human rhinovirus 10 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — DQ473498,FJ445178 Human rhinovirus 100 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445175 Human rhinovirus 11 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — EF173414 Human rhinovirus 12 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — EF173415 Human rhinovirus 13 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — FJ445116,FJ445117 Human rhinovirus 14 NC_001490 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus B — L05355,K02121 Human rhinovirus 15 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473493 Human rhinovirus 16 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — L24917 Human rhinovirus 17 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — EF173420 Human rhinovirus 18 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445118 Human rhinovirus 19 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445119 Human rhinovirus 1B NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ0239 Human rhinovirus 2 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — XQ2316 Human rhinovirus 20 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445120 Human rhinovirus 21 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445121 Human rhinovirus 22 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445122 Human rhinovirus 23 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473497 Human rhinovirus 24 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — FJ445190,EF173416 Human rhinovirus 25 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445123 Human rhinovirus 26 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445124 Human rhinovirus 27 NC_001490 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus B — FJ445186,EF173421 Human rhinovirus 28 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473508 Human rhinovirus 29 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445125 Human rhinovirus 3 NC_001490 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus B — DQ473485,EF173422 Human rhinovirus 30 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — FJ445179,DQ473512 Human rhinovirus 31 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445126 Human rhinovirus 32 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445127 Human rhinovirus 33 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445128 Human rhinovirus 34 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — FJ445189,DQ473501 Human rhinovirus 35 NC_001490 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus B — FJ445187,DQ473487 Human rhinovirus 36 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473505 Human rhinovirus 37 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — EF173423 Human rhinovirus 38 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — DQ473495,FJ445180 Human rhinovirus 39 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — AY751783 Human rhinovirus 4 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — DQ473490 Human rhinovirus 40 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445129 Human rhinovirus 41 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473491 Human rhinovirus 42 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445130 Human rhinovirus 43 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445131 Human rhinovirus 44 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473499 Human rhinovirus 45 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445132 Human rhinovirus 46 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473506 Human rhinovirus 47 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445133 Human rhinovirus 48 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — DQ473488 Human rhinovirus 49 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — FJ445134,DQ473496 Human rhinovirus 5 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445112 Human rhinovirus 50 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445135 Human rhinovirus 51 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445136 Human rhinovirus 52 NC_001490 vertebrates,human 3 Picornaviridae,Enterovirus,Rhinovirus B — FJ445137,EF173424, FJ445188 Human rhinovirus 53 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473507 Human rhinovirus 54 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — FJ445138,FJ445139 Human rhinovirus 55 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473511 Human rhinovirus 56 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445140 Human rhinovirus 57 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445141 Human rhinovirus 58 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445142 Human rhinovirus 59 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473500 Human rhinovirus 6 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — DQ473486 Human rhinovirus 60 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445143 Human rhinovirus 61 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445144 Human rhinovirus 62 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445145 Human rhinovirus 63 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445146 Human rhinovirus 64 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — EF173417,FJ445181 Human rhinovirus 65 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445147 Human rhinovirus 66 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445148 Human rhinovirus 67 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445149 Human rhinovirus 68 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445150 Human rhinovirus 69 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445151 Human rhinovirus 7 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — DQ473503,FJ445176 Human rhinovirus 70 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — DQ473489 Human rhinovirus 71 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445152 Human rhinovirus 72 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445153 Human rhinovirus 73 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473492 Human rhinovirus 74 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473494 Human rhinovirus 75 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473510 Human rhinovirus 76 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — FJ445182,DQ473502 Human rhinovirus 77 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445154 Human rhinovirus 78 NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — FJ445183,EF173418 Human rhinovirus 79 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445155 Human rhinovirus 8 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445113 Human rhinovirus 80 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445156 Human rhinovirus 81 NC_001617 vertebrates,human 3 Picornaviridae,Enterovirus,Rhinovirus A — FJ445159,FJ445158, FJ445157 Human rhinovirus 82 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445160 Human rhinovirus 83 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445161 Human rhinovirus 84 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445162 Human rhinovirus 85 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445163 Human rhinovirus 86 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445164 Human rhinovirus 88 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — DQ473504 Human rhinovirus 89 NC_001617 vertebrates,human 4 Picornaviridae,Enterovirus,Rhinovirus A — FJ445166,M16248,FJ 445165,FJ445184 Human rhinovirus 9 NC_001617 vertebrates,human 3 Picornaviridae,Enterovirus,Rhinovirus A — FJ445114,FJ445177, FJ445115 Human rhinovirus 90 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445167 Human rhinovirus 91 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445168 Human rhinovirus 92 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445169 Human rhinovirus 93 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — EF173425 Human rhinovirus 94 NC_001617 vertebrates:human 2 Picornaviridae,Enterovirus,Rhinovirus A — EF173419,FJ445185 Human rhinovirus 95 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445170 Human rhinovirus 96 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445171 Human rhinovirus 97 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445172 Human rhinovirus 98 NC_001617 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus A — FJ445173 Human rhinovirus 99 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — FJ445174 Human rhinovirus A NC_001617 vertebrates,human 17 Picornaviridae,Enterovirus,Rhinovirus A — GQ415051,JF285322, JF285324,JN837692, JF285321 ,JN798589, JN815250,JF285323, JQ747751 ,DQ473509 , JN798583,JN798561 , GQ415052,A10937, J N837697,JF285329, J N798556 Human rhinovirus B NC_001490 vertebrates,human 9 Picornaviridae,Enterovirus,Rhinovirus B — JN815239,JN798573, J F285330, J F285308, J F285309, J N 798588, JQ994497,JF285331, JQ245969 Human rhinovirus B72 NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — GU968948 Human rotavirus NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. U59104 (SEROTYPE 2/ 10 STRAIN S2) Human rotavirus NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 D38150 (STRAIN L26) Human rotavirus NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. U59103 (STRAIN RV5) 10 Human rotavirus NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF079358 (strain US1205) 10 Human rotavirus NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AF079357 (strain US1205) Human rotavirus NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AF079356 (strain US1205) Human rotavirus 1 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. U59108 strain RV4 10 Human rotavirus A NC_011500 vertebrates,human 20 Reoviridae,Rotavirus,Rotavirus A seg. 5 EF672557,JF766584, FJ423117,EF672620, FJ423139,AF190169, GU189555,Z32552, JF766595,EF672613, EF672592,U11492, FJ423156,JF766573, JF421981,L18943, D38151,HM627559, EF672564,FJ423128 Human rotavirus A NC_011501 vertebrates,human 95 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN706641,JF304934, FJ423141 ,EU984100, EF672572,EF672580, JN869275,JF304923, AY787648,EU520416, JN706640,AB741657, JX946176,JN706620, FJ747622,JN706624, AF506014,JN706633, DQ005107,GU18955 7,JN706628,JN70662 3,JX946165,JN70663 9,JF766574,EF67258 6,AB748601,KC1397 87,AF506018,KC149 936,EF672579,JQ863 317,EF672622,EF672 615,JN706622,JX416 216,AF506293,EF672 607,JQ087442,JN869 276,EF554133,EF672 573,EF672600,HQ64 1361,JN706638,JQ71 3650,JQ087431,EF55 4100,EF672594,EU2 00800,JN706625,JN8 69272,AB022770,EF6 72601,JN706627,JF8 04986,JX307623,JX3 07626,EF554089,DQ 005118,FJ423151,JF 421983,JF766585,G 0414548,FJ423119,F J747633,JX567766,J X416224,JX307624,H M627560,KC149929, JQ087453,EF672608, EU520415,FJ423130, JN104617,JN706626, EF672566,JN706634, EF554122,JX307625, JN869274,EF554111, HQ641370,JN869277 ,JN706637,JX416209 ,JF766596,JX509932, EF672587,JN869273, EF672559,JN706621, JN706635,JN706631 Human rotavirus A NC_011502 vertebrates,human 113 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX307619,EF554090, JQ715661,AB022771, JF421982,JN706613, JX307621,FJ423120, FJ747621,AF338246, JN706605,JN706619, HQ702225,EF672593 ,EF672565,JN706614 ,FJ423131,AF338248 ,AB748596,JN104624 ,EF672621,AF190172 ,HQ025982,HQ64136 0,EF672614,AF19017 0,EF554123,HQ7022 47,FJ423152,JX5677 65,AF190171,X81435 ,AB771768,EF554112 ,JN706603,JQ898159 ,JX416208,HQ02598 1,GU189556,JX9461 75,JQ713649,JX4162 23,JN706606,HQ670 643,HQ702258,HQ64 1369,EU984099,JN70 6598,JN706616,AB77 1753,JN706604,JX94 6164,KC149935,AY7 87649,KC139786,JQ 715664,JF304922,JN 706601,HM627561,J F766597,JN706617,E U200801,AF506015, DQ005117,JN706610 ,JN706602,JX307620 ,JX416215,EU868888 ,DQ005106,JQ86331 6,HQ702236,FJ42314 2,HQ702214,X81428, JF766575,JQ715662, HQ670636,GQ41454 7,JN706611,JN70661 5,AB771770,JN70659 9,JF766586,AB77176 4,X81433,X76645,X8 1425,JN706609,JX30 7622,X81434,JN7066 12,JN706608,JN1046 16,AB741656,EF5541 01,JF304933,EF6725 58,JQ715663,EF5541 34,KC149928,AF506 019,JQ715660,AF338 247,AF541920,X8142 7,FJ747632,JN70660 0,X81437,JX509931,J N706607,JN706618,X 81436 Human rotavirus A NC_011503 vertebrates,human 622 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF965002,JN706202, JX458968,JQ710665, GQ414545,GQ99689 6,JN706564,DQ8736 78,JN706267,AB5345 36,JX946173,FJ4475 67,JN706204,JN7065 54,AF260949,JN7065 66,JXQ88016,JF9650 04,AB527037,JN7062 12,JXQ88013,HQ702 259,AB527030,FJ948 854,JX509940,JN706 275,JXQ88018,AB534 532,JN706251,JN706 346,JN706559,AB527 009,JQ043268,JN706 227,FJ152132,AB527 023,HQ738627,FJ529 386,JN706238,GU37 7172,FJ948849,JN70 6210,JF965010,AB18 0969,JQ043273,JN70 6218,AJ278254,JN70 6352,JN706327,JN70 6334,AB527027,AB5 34530,FJ948843,GQ 996882,JX458962,JN 706215,JN706270,X6 3156,DQ923801,EU6 79389,JN706345,JQO 43276,JX458955,JN7 06377,AB527034,JN7 06299,DQ062126,AB 530270,JQ253576,JN 706230,JN706304,AB 527033,AB527014,JF 965000,DQ440616,G U377151,JXQ88009,J X470504,JQ289117,J X470511,DQ062128, DQ099750,JX567752 ,AB527019,EF672595 ,JN706310,FJ529395, EU791924,AB534535 ,JN706278,AB527029 ,JN706338,FJ747618, JF766605,JQ043267, EF672574,JF813102, AB118024,HQ537522 ,JN706367,JN706563 ,JN706203,JQ043277 ,DQ873679,AF17083 7,AB530268,EF67260 2,JN706336,JN70624 9,JF965005,HQ53751 7,HQ702237,AY6295 60,FJ948833,JQ2535 67,DQ873672,AB527 015,JQ710675,JN706 262,AB527035,HQ73 8621,FJ447570,JN70 6229,EU679390,JN70 6351,GU377136,JQ2 53573,JN706309,AF2 60939,GQ398012,JF 964999,EF672609,JN 706370,JX470508,JQ 710671,FJ948836,JN 706348,JN706295,AF 260942,JX458964,AF 260941,FJ423132,FJ 423143,AF260958,JN 706224,GU377144,J N706353,FJ747630,E F077484,AB527025,J X458966,AF260943,J N706317,AF170834,J N706306,JQ710662, DQ099748,JX103956 ,JN706302,JN706341 ,AY787646,JN706231 ,JX470510,EF672567 ,EU679391,JN706291 ,JN706556,KC242226 ,GQ117003,AF38691 5,EU805775,JN70632 8,AF274971,JF81310 6,JN706319,JQ25357 2,AB527041,DQ8736 73,GQ452924,FJ423 121,JN706240,JN706 232,JN706258,JF964 998,JQ710676,AF260 936,JN706314,JQ253 574,DQ099753,GU37 7148,JX567748,JX47 0506,AB534526,JN70 6378,GU377133,JX4 70513,HQ702248,L21 666,JN706308,JX103 957,JQ253564,JN706 343,HQ738577,JN70 6361,GQ996884,JQO 43270,AY206861,JN7 06364,JN706245,FJ9 48829,JN706558,GQ 996892,JF304931,JF 965009,JN706239,AF 143690,FJ915079,AB 527006,GQ996890,K C841471,AB534533, AB530267,JN706255, AB534520,EU679392 ,AB527022,JX567750 ,DQ122400,JXQ8801 9,JN706359,AB52704 0,AF143689,JQ25356 3,JN706329,GU3771 74,AY856443,JXQ880 12,JN706305,DQ099 749,DQ873670,JN70 6199,AF274969,AB52 7043,DQ099751,GQ3 98018,HQ537521,JN 706219,JN706266,JN 706294,JX458958,JQ 710669,JN706344,G 0117005,JN706372,J N706246,AB669005, AB527028,JN706318, JN706326,AY456382, JX470512,AF143688, FJ948838,JXQ88020, JN706248,EF554109, JN706300,JQ818169, DQ017650,JQ710673 ,JN706303,JX567753 ,DQ873676,JQ04327 1,JN706313,JN70636 0,AB527020,JN70623 3,DQ111868,AB5270 21,AF260948,JX4705 05,DQ062123,FJ7476 19,AB534522,JX4589 54,GU377164,JQ253 569,JN706254,JXQ88 015,EF672616,JN706 311,EU200798,AB52 7042,JN706339,HQ7 02226,JF965008,GU3 77142,JN706222,DQ 099746,AB530266,AF 260935,JN706366,JN 706369,GQ996849,G 0452923,JX567751,J 0043278,JF742651,J N706574,GQ996891, JN706358,HQ738583 ,JN706330,JQ710677 ,JN706337,AB530269 ,AB530274,JN706312 ,AB527031,JN706323 ,HQ537513,JN70637 3,JN706321,JN70626 8,AB534531,JQ71066 4,JN706217,AB18097 0,JN706264,AB74165 4,AB534523,GQ9968 67,AF500235,DQ062 130,JX458959,JQ863 314,JX307591,GQ45 2926,JN706253,JN70 6237,HQ702215,JN7 06206,GU377135,EF 088831,AB534521,FJ 152121,JN706261,FJ 915078,JN706211,G U377166,JN706220, HM627558,JN706247 ,JF719063,DQ062124 ,JN706276,FJ948839, JQ253570,GQ996925 ,JX458965,AF438228 ,JN706228,JN706208 ,JN706567,EF159575 ,JN706242,JN706315 ,JF965001,JQ710666 ,HQ537514,EF67256 0,AB534534,JQ71067 4,JF965006,HQ53751 2,JN706292,AB52701 6,FJ915077,AF15961 0,JQ710670,HQ7386 20,FJ948837,AB5270 24,JN706322,JN7063 31,AB527011,JF9650 03,AJ311738,AB5270 17,AB527038,AB530 273,JN706201,JN706 252,DQ099747,AF26 0934,JN706565,AB52 7045,AY631125,GU3 77169,JN706221,JXQ 88014,FJ423153,FJ5 29385,JQ710667,JN7 06560,AB669013,FJ9 48831,JN706307,JN7 06347,AF260959,GQ 996894,AF260957,AF 450293,FJ948853,JN 706374,JN706250,JN 706257,JX307594,G U377145,AB527008,J N706320,JN706223,A F260940,EU984109,J N706362,FJ529383,D 0099754,EF672623, AF260937,JX470507, JN706335,JN706357, JQ253571,AB534527, AB534524,JX458956, JN706333,JN706355, JN706324,JN706236, GQ996883,JN706259 ,JF304920,AB527044 ,GQ996885,JN70620 7,JQ253575,JN70637 9,JN706562,GQ9968 87,JX458960,JN7062 43,JN706214,JN7063 63,EU679394,DQ062 127,JN706575,JN706 568,JX458953,JX307 593,HQ738579,JN70 6296,JN706569,AB53 4528,EF088832,AB52 7007,JN706256,AF50 1580,AB669009,JQ71 0672,GQ996889,AF1 70836,JN706279,FJ9 48845,HQ738622,AF 260946,FJ915094,U0 4350,AB527018,JN70 6350,JN706325,DQ0 62129,AF260933,FJ9 48847,JQ043269,DQ 099752,HQ537519,A F260938,JN706200,J N706293,JN706265,J 0253566,GQ996893, GU377155,JN706571 ,JX567749,AB530271 ,FJ948832,AB527039 ,DQ873669,DQ87367 1,DQ117937,JQ2535 68,JQ253562,GQ117 006,JX110838,JX458 967,JN706557,JN706 572,JN706356,AB530 272,JXQ88011,JN706 375,JN706301,GU37 7159,GQ996886,AB5 27012,KC139779,JQ 710668,JQ713096,JX 458961,AB534525,JX 470509,AB669017,G 0117002,DQ873677, JN706235,AF409087, DQ117938,JN706332 ,JN706561,JN706371 ,JN706244,AY003871 ,GQ996888,JN70620 5,JN706365,FJ44756 8,JN706213,AF17083 5,JN706354,JQ34321 9,JQ043274,GQ3980 14,AF260947,JN7063 68,JF421980,FJ9488 51,AF260944,FJ9488 48,JN706573,JN7065 70,JF965007,JX3075 92,JN706225,JN7063 49,AF274970,GQ996 926,EF672588,AB180 974,JX458957,AB527 013,AF260945,JN706 263,AJ278257,JN706 555,JF766594,FJ152 110,M58290,JN70620 9,JN706226,DQ0176 49,GQ117004,JX458 963,JF766583,GU377 143,JXQ88017,EF159 576,JN706269,JN706 340,HQ738628,EU67 9393,JN706216,DQ1 17939,AY630924,AB 527046,JQ043275,JN 706271,JXQ88008,D 0062125,JQ710663,J N706376,JQ043272, AF438227,GQ452927 ,JN706297,AB527010 ,GQ996895,JQ04326 6,GQ117001,JN7063 42,JN706198,GU377 147,JXQ88010,AB527 036,JN706260,DQ92 3797,HQ537518,JN7 06316,JN706298,JQ2 53565,AB527032,AB 534529,AB527026,EF 672581,GU377134,FJ 948830,FJ948855,GU 377150,JN706234,G 0996847 Human rotavirus A NC_011504 vertebrates,human 294 Reoviridae,Rotavirus,Rotavirus A seg. EF672596,JQ043306, 10 AJ236783,GQ465013 ,AJ400644,AF469676 ,AJ236755,AJ311732, GQ465018,GQ46502 4,JX307628,AY78765 0,AJ236750,AB23270 0,JX458984,AB32696 2,GQ465019,AB3612 76,JF766576,AY6015 42,EF554113,EF6725 68,GQ465021,AJ400 634,EF159572,AB196 491,AB741658,GQ46 5037,JQ043300,HQ6 41371,AF170833,AB3 26337,FJ915085,AJ4 27314,AY576006,JQO 43311,JN706655,JF7 66587,AY601545,AJ2 36756,JN706657,AJ2 36784,AJ236749,GQ 465034,JF304935,AF 284778,AB022772,JF 813103,AB748606,JX 458977,AB361279,JX 946177,EF159573,D 0299876,FJ152114,E U679381,AB211988, AJ400636,JN706644, D89873,GQ465020,J X307629,AJ236777,H M235509,GQ465028, JN706646,EU679378, FJ152136,GQ465026 ,AB326336,EF672575 ,JQ043302,AF541921 ,EF672603,DQ92380 3,AB762778,AB1969 59,EU659855,AB0O8 217,FJ423144,JN706 650,JX458980,AF469 679,GU189558,AF26 0928,AF284777,AJ40 0638,AF170831,JQ04 3308,JX458982,JF42 1984,AJ278252,AJ40 0635,JX307630,JF80 4998,JQ898161,GQ4 65015,AJ236775,FJ4 23133,AB196958,AB 201459,GQ465006,J X307627,AB361282, AB326343,HM627562 ,JN706642,AB213392 ,EF159574,JN104626 ,GQ465017,AJ23677 1,GQ465036,AB1964 92,FJ915088,AJ4273 16,JN706653,AF1708 30,JN706660,EU6793 77,AY629562,JX4589 69,GQ465031,AB326 339,AF200225,AY601 540,U59106,AJ23677 6,EF089269,JN10461 8,FJ423154,JN70666 1,JX458975,JX45897 0,GQ465032,JQ8633 18,EF672589,GQ465 007,KC139788,AJ236 778,FJ685615,GQ46 5022,EU791925,AB2 11992,AF506291,JQO 43312,JF813107,GQ 465005,AJ427313,AB 213391,AF506016,JN 706648,EU984101,AJ 236770,JQ043304,G 0414549,AB326334,J X458978,JX416225,A Y601544,AJ400637,E F554135,JN706662,G U138211,AB326348,J N706658,AB303218, AB326340,EU679382 ,FJ152125,JN706645, DQ005116,KC890886 ,U59107,D88830,GQ 465023,EU679379,JX 458974,JQ713651,AJ 400641,D10772,KC8 90884,JN706647,HQ 641362,EU679380,G 0465035,DQ639954, AF469678,JX458976, JQ043305,AB326297, KC890885,AB211987 ,JQ898160,FJ915087 ,GQ465025,GQ46501 0,EF672624,JX45898 1,JF766598,AB21199 1,AB763972,D88829, GQ465009,JN706663 ,JX458973,KC890882 ,JN706651,AY601541 ,AJ236752,AJ236765, AF260929,AB361284, KC890883,AF200224 ,FJ747634,EF672561 ,KC890887,AJ400640 ,AB326969,JX458983 ,FJ423122,EF672617 ,JN706643,AB361289 ,GQ465016,DQ92379 9,GQ465014,AB3262 86,JN706659,AF4696 77,AJ400643,AJ2367 79,AJ400639,JN7066 54,JQ043310,AJ2367 85,EF554091,JN7066 56,GU592516,JQ043 309,GQ465011,JN70 6652,AF284780,AJ42 7315,FJ747623,AJ23 6753,EF672582,AJ23 6781,JX458972,GQ4 65008,GQ465030,DO 005105,AB326965,AF 260930,JX458971,AB 326338,JX567767,EF 672610,GQ465029,G 0465033,AF284776, AJ400642,GQ465012 ,U59110,AJ236780,G 0465027,JF804987,A J236751,AB211989,A B361288,JQ043303,A B326342,JN706649,A B326345,AY601543, AJ236754,AJ236782, JX458979,EF554124, EF554102,D10771,A B326344,JF805008,A F170832,AB211990,J Q043301,EU200802, JF304924,FJ915086, AB361277,AJ278255, JX946166,JQ043307 Human rotavirus A NC_011505 vertebrates,human 126 Reoviridae,Rotavirus,Rotavirus A seg. EF590982,GQ414550 11 ,JN872347,AB008659 ,EF590987,JN706677 ,JX946167,EF672569 ,KC139789,AB04521 8,EU200803,AB0086 62,JN706673,HM627 563,U54772,FJ42312 3,JQ043322,EF67259 0,JQ043320,JN70667 5,FJ747635,EF59098 8,EF672576,JF76658 8,JN869288,JQ71568 0,FJ423145,JN70667 8,EF590983,JQ04332 3,KC149937,AB0086 63,JX946178,FJ7476 24,AB035708,EF6725 83,GU189559,AB008 657,EF590981,JN706 680,EF554125,EF590 980,JN706664,JN869 287,AF508732,AB763 974,AB008664,AB00 8656,EF554114,U547 73,AY841126,JN7066 85,AB008658,AY033 396,EF554136,JN706 679,AB045219,JN706 665,AF338245,HQ02 5986,AY787651,AB0 08660,KC149930,HQ 670638,U96698,FJ42 3134,EF590990,AF33 8244,M33607,EF590 991,AY803730,AB04 5217,JN706681,EF59 0989,JN706683,JN86 9284,EF590985,JX41 6210,AB045220,JN86 9289,EF590986,AB76 3975,EF672562,AY76 9694,EU984102,JF76 6577,JN706672,JQ04 3315,JN706674,AB0O 8655,EF672625,JX50 9934,JN706684,JF80 4999,AB741659,JX41 6226,EF554103,EF59 0984,AB022773,X767 79,AF306494,FJ4231 55,JQ043313,AB7486 11,JQ043319,EU791 926,JN706682,EF672 604,EF672618,JN869 285,JN869286,JQ043 318,EF672597,HQ67 0645,AY770974,JN70 6676,EF672611,JX56 7768,JF766599,JQ04 3321,AY601548,AB0 08661,HQ025985,AY 769695,JF804988,JF 421985 Human rotavirus A NC_011506 vertebrates,human 73 Reoviridae,Rotavirus,Rotavirus A seg. 2 HQ025976,JF766579, GQ414541,HM62755 4,EF583050,GU1895 52,JN706476,EU9841 04,FJ423125,FJ7476 14,JX567761,DQ480 724,DQ005113,EF55 4083,EF583026,HQ6 70633,JX416219,JN7 06469,EF583034,EF5 83022,EF583030,JN7 06487,JF421976,JN7 06477,JX416212,JF7 66590,FJ423114,EF5 83014,EU200794,JX9 46169,EF583038,JN7 06483,JN706478,JN7 06467,EF554116,DQ 862063,AB022766,JX 416205,JN706468,JF 766601,EF583046,FJ 423147,FJ423136,JX 946160,JX509936,EF 583042,EF554127,JN 104612,JN706471,JN 706484,JN706473,JN 706486,EF583018,FJ 747626,JQ713646,JN 706485,JN706480,AY 787652,JN706470,JN 706479,JN706481,EF 554094,AB741650,D 0005124,JN706474, KC139782,JN706466, HQ025975,EF554105 ,JQ863310,JN706475 ,JN706482,JN706472 Human rotavirus A NC_011507 vertebrates,human 81 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX946159,JN706448, EF583017,JQ713645, EF583037,HQ702218 ,JN706449,JX416204 ,JF421975,JN706444, DQ005125,EU200793 ,EU984103,JN706445 ,HQ702229,FJ747625 ,HM627553,JF76658 9,JN706453,JX56776 0,JN706465,EF55412 6,JN706451,HQ7022 51,AY787653,JN7064 61,HQ702240,HQ025 973,JN706462,JN706 454,HQ025974,JF766 578,JN706452,HQ67 0639,JN706457,FJ42 3146,JN706460,FJ42 3113,JF766600,JQ86 3309,KC139781,JN70 6464,AB022765,JN70 6459,HQ702207,JF30 4915,EF554104,JX41 6218,JN104619,JN10 4611,JN706450,DQO 05114,EF583033,JN7 06447,AB741649,FJ4 23135,HQ641355,FJ4 23124,HQ670632,JN 706458,GU189551,E F583041,JX416211,J N706455,FJ747613,E F554082,EF554093,H 0641364,JN706456,J N706446,EF583021, EF583045,GQ414540 ,JX946168,EF554115 ,EF583029,JN706463 ,JX509935,EF583049 ,EF583025,JF304926 Human rotavirus A NC_011508 vertebrates,human 86 Reoviridae,Rotavirus,Rotavirus A seg. 3 EF554117,JN706489, AY277919,JX946170, JF766602,FJ747627, JF421977,EF554095, AY277918,EF583035, JF766591,HQ670634, AB022767,AY277914 ,JQ863311,JX416213 ,EF554084,HQ64135 7,JN104613,AY27791 7,EF583015,DQ0051 12,JN706509,HQ670 641,KC139783,JN706 494,HQ641366,FJ423 115,JN706503,JX946 161,DQ005123,JN70 6491,JN706502,HQ0 25977,FJ423126,EF5 83039,EF583031,JN7 06488,EU984105,EF 583023,JN706493,FJ 747615,AY277915,JN 706496,JN706499,EF 554106,JN706504,EF 583019,JF304917,HQ 025978,JN706506,JN 104621,JN706490,EF 583047,AY277920,EF 583051,AB733135,EF 583027,JF766580,JX 567762,AY277916,EF 583043,JN706501,JX 416220,AY267335,EF 554128,GQ414542,H M627555,JQ713647,J N706498,JF304928,J X416206,EU200795,J N706500,JN706492,J N706497,JX509937,F J423137,GU189553,J N706495,JN706507,J N706508,FJ423148,A B741651,AY787654,J N706505 Human rotavirus A NC_011509 vertebrates,human 315 Reoviridae,Rotavirus,Rotavirus A seg. 6 JQ818154,JN706538, GU390418,HM62755 7,JF421979,GU39045 2,EU372724,JQ2300 99,JQ230080,FJ1521 09,JQ043298,GU390 443,EU372726,JX307 599,JN706544,HQ73 8601,JQ230065,FJ68 5614,EU372746,GU3 90414,EF426129,JQ2 30082,JQ230070,EF4 26136,GU390438,AY 601554,EF583040,E U556221,EU372748, EF426139,HQ445977 ,GU390425,KC14992 6,FJ747617,JF30491 9,EU372745,GU3904 53,HQ445975,JQ230 083,JN706535,EF583 016,JQ230066,HQ61 1018,AY787645,AY6 01552,AY601550,JX5 67763,JQ863313,EU 372732,JQ230090,K C890877,EU984108, FJ152120,GU390448, AF260931,JQ818153, GU390432,EF426137 ,GU390440,JX94617 2,EF426124,EU3727 25,EU372738,HQ611 009,JX307600,JQ230 086,JQ230101,AF531 912,HQ611032,JN70 6546,GU390423,HQ6 10999,HQ611022,JQ 818168,EF583028,H 0738589,HQ611003, AY601551,HQ611006 ,EU679384,JQ23006 4,JQ230068,GU3904 50,EF426122,JQ0432 94,GU390416,JQ230 072,JQ230061,JQ230 089,GU390445,EF42 6126,FJ423118,GU39 0422,JQ230081,HQ6 11014,HQ611021,JN 104614,EU372743,E U679385,AB022768,J 0818166,JN706547,J 0230093,DQ873675, EF426120,EF426130, JN706532,HQ738584 ,JQ230088,DQ92380 0,EU372730,GU3904 42,EU372727,JQ230 078,HQ738586,HQ61 1001,EU805774,JF76 6593,JQ230063,DQO 05110,JQ230092,GU 390415,EU372750,H 0738598,GU390426, HQ611005,JQ230100 ,EU372747,JX509939 ,HQ738597,EF42613 8,GU390441,EF4261 28,EF426119,JN7065 43,HQ611013,EF583 036,JQ230102,JQ230 097,JQ087427,HQ61 1020,JQ230077,GU3 90417,EF426131,HQ 611011,EF426140,JQ 230094,JX416207,H 0611017,GU390430, JQ043296,JQ230059, JQ230084,HQ738595 ,JF766604,KC890878 ,JQ818151,HQ61102 7,EU372736,HQ7385 99,HQ611019,HQ611 016,HQ738591,EU67 9388,EU372742,AF3 09652,EU372731,JN7 06550,JN706536,JF3 04930,EU372728,GU 390427,EU679383,A Y601549,JQ230095,J N706542,HQ445978, EU372733,HQ611033 ,JN706551,JQ230085 ,EF426125,HQ61100 0,DQ005121,JQ2300 79,JN706548,HQ738 593,HQ611008,JQ23 0073,JQ230071,GU3 90454,GU390429,EF 426134,HQ611010,G U390449,JQ230062,J N706533,JQ818152, EF583048,JX946162, EU372739,JN706545, JQ818155,HQ611007 ,HQ738594,HQ61099 8,JQ230060,HQ7385 88,EF426132,AB7416 53,KC139784,HQ738 596,GU390433,HQ64 1358,DQ923796,EF5 54108,EU372737,GU 390444,JQ230069,G U390460,X94617,GQ 414544,FJ423140,EU 372741,GU390431,E F426135,GU390447,J 0230087,JN706552,J F766582,GU390428,J 0230096,JQ230074,J N706541,EF426121, HQ611024,EF554119 ,GU390434,EU20079 7,EU372740,HQ7385 92,HQ738585,EF583 044,HQ611002,AY60 1553,GU390455,JN7 06534,EU372729,KC 890881,EF583052,E U372749,U04741,JN 104622,JQ087449,E U372734,JQ230098, EU372735,EU679386 ,EF583032,EF426127 ,GU390446,HQ64136 7,JN706553,FJ74762 9,GU390436,FJ42312 9,JN706540,HQ6110 30,JX307601,GU390 458,HQ611012,JQ23 0091,KC890879,JN70 6549,JQ230067,JQ23 0075,EF554086,EF42 6123,EU791923,EF5 83024,EU556222,EU 556223,FJ152131,JN 706537,JQ043293,H 0738600,GU390457, EF554130,KC890876 ,HQ738590,HQ61100 4,JX307602,EF55409 7,AF531913,GU3904 56,X94618,GU59251 5,FJ423150,HQ61101 5,JQ087438,EU3727 44,EF583020,GU390 435,GU390459,JQ81 8167,JX416221,EF42 6133,EU679387,KC8 90880,JQ230058,HO 445976,GU390437,E U330646,JN706539,J 0230076 Human rotavirus A NC_011510 vertebrates,human 68 Reoviridae,Rotavirus,Rotavirus A seg. 4 AY787644,FJ423116, EF672577,KC139780 ,EU679398,HQ44596 7,EF554118,EF67261 2,HM627556,HQ4459 69,JF766581,EF5541 29,L33895,EU679399 ,L19712,JF421978,D 0887060,JF766592,E U679395,D14032,GQ 398013,EF672591,G U320751,FJ435210,E F672584,JQ863312,U 16299,EF672570,FJ4 23127,EU984107,D3 8054,EF554096,JF76 6603,GU189554,M60 600,L34161,GQ4145 43,FJ747628,GQ453 422,AB741652,FJ435 205,AF531909,FJ423 138,FJ423149,EF672 563,M58292,HM6275 45,D38052,EF672605 ,GQ452950,EF67255 6,EF554107,EU8057 73,FJ747616,EF6725 98,EU984106,HQ445 970,AF260932,EF672 619,U07753,JN70651 0,GQ452951,EU6793 96,AB077766,HQ738 572,AF523677,EU67 9397,EU679400 Human rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY603151 RMC/G60 Human rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY603152 RMC/G66 Human rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY603150 RMC/G7 Human rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY603153 RMC437 Human rotavirus A RMC61 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY603149 Human rotavirus A strain NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. DQ288660 CMH222 10 Human rotavirus A strain NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 DQ288659 CMH222 Human rotavirus A strain NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF373605 RMC100 11 Human rotavirus AU-1 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 D10970 Human rotavirus B NC_021541 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 1 EU490415 Human rotavirus B NC_021542 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 9 AY238385 Human rotavirus B NC_021543 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 4 AY238388 Human rotavirus B NC_021544 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 6 AY238389 Human rotavirus B NC_021545 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 2 AY238390 Human rotavirus B NC_021546 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 5 AY238391 Human rotavirus B NC_021547 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 7 AY238392 Human rotavirus B NC_021548 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 8 AY238393 Human rotavirus B NC_021549 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. AY238394 11 Human rotavirus B NC_021550 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. AY238384 10 Human rotavirus B NC_021551 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 3 EU490418 Human rotavirus C NC_007543 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus C seg. 6 AY941780,AY941782 ,AY941781 Human rotavirus C NC_007544 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus C seg. 7 AY820180,AY770977 ,AY820181 Human rotavirus C NC_007545 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus C seg. 9 AY781283,JN969078, AY781284,AY770979 Human rotavirus C NC_007569 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus C seg. AY803727,AY803729 10 ,AY770978 Human rotavirus C NC_007570 vertebrates,human 22 Reoviridae,Rotavirus,Rotavirus C seg. 5 AB499614,AM118019 ,AF325806,AB008672 ,AB533509,GU59251 9,AY795898,AY7709 80,AB533508,AF3258 05,AB533510,AB648 915,M94156,AM1180 20,AB533511,M9415 5,EF641110,AY78657 1,AB533512,AB5335 13,AY786570,AM118 018 Human rotavirus C NC_007571 vertebrates,human 44 Reoviridae,Rotavirus,Rotavirus C seg. 8 AB086963,AF225563, AF225557,AB086968, AB086962,AF225555, AY803724,AF225553, AF225554,AF225561, D87543,AB004250,A F225552,AF225558,A B648916,AM118022, AF225556,AB086969, AF225560,AF323982, AB281654,AB281655 ,AY803726,AF225559 ,AM118021,AB08696 6,M61100,AY392446, AY803725,AF323979, AB499615,AB086964 ,AB281652,AB00867 1,AB086967,AF12047 8,EF641111,D87544, AB281651,AB281653 ,AY392447,AF225562 ,AM118023,AB08696 5 Human rotavirus C NC_007572 vertebrates,human 20 Reoviridae,Rotavirus,Rotavirus C seg. 3 AY395070,AB533526 ,AB008670,AM11802 5,AB533523,AB6489 17,AB533524,X79441 ,AB533521,AF323981 ,AY795897,AM11802 4,AY795896,AF32398 0,AY795895,AY3950 69,AB533525,AB499 613,AB533522,AM11 8026 Human rotavirus C NC_007573 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus C seg. AB499612,AB008673 11 ,AY941784,D88353,A Y770976,AY941783 Human rotavirus G10P11 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AY527229 10 Human rotavirus G10P[8] NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 AB714265 Human rotavirus G10P[8] NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 AB714259 Human rotavirus G10P[8] NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 AB714260 Human rotavirus G12P[6] NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU839947,EU839946 ,EU839948 Human rotavirus G1P6 NC_011504 vertebrates,human 22 Reoviridae,Rotavirus,Rotavirus A seg. AF173181,AF173180, 10 AF173182,AF173194, AF173183,AF173184, AF173191,AF173192, AF173179,AF173199, AF173187,AF173197, AF173188,AF173198, AF173193,AF173186, AF173189,AF173190, AF173195,AF173196, AF173200,AF173185 Human rotavirus G1P8 NC_011504 vertebrates,human 7 Reoviridae,Rotavirus,Rotavirus A seg. AF173207,AF173205, 10 AF173201,AF173202, AF173203,AF173204, AF173206 Human rotavirus G1P[8] NC_011503 vertebrates,human 34 Reoviridae,Rotavirus,Rotavirus A seg. 9 GU358423,HQ65087 6,HQ650871,GU3772 04,HQ650886,GU377 203,GU358420,GU35 8446,GU358438,HQ6 50872,GU377196,HQ 650882,GU358422,H 0650884,GU358441, HQ650878,GU35844 0,GU377198,GU3584 21,GU377201,HQ650 881,GU358436,GU35 8429,GU377200,GU3 58443,GU358444,GU 358442,HQ650879,G U358437,HQ650877, GU358445,GU35843 9,GU377205,HQ6508 83 Human rotavirus G1P[8] NC_011510 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU839957,EU839956 ,EU839955,EU83995 8 Human rotavirus G2P4 NC_011504 vertebrates,human 9 Reoviridae,Rotavirus,Rotavirus A seg. AF174298,AF174299, 10 AF174304,AF174300, AF174301,AF174305, AF174302,AY527228, AF174303 Human rotavirus G2P[4] NC_011510 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU839950,EU839949 ,EU839951,EU83994 5 Human rotavirus G2P[8] NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU839954 Human rotavirus G3P[6] NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU734177 10 Human rotavirus G3P[8] NC_011504 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. AF173210,AF173212, 10 AF173209,AF173211, AF173208 Human rotavirus G4 strain NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 X13603 St,Thomas 3 Human rotavirus G4 strain NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. U83798 VA70 10 Human rotavirus G4P[8] NC_011504 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. AF173214,EF011980, 10 AF173215,AF173213 Human rotavirus G5P[6] NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB257126 Human rotavirus G9P6 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 EU753969 Human rotavirus G9P6 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU753970 Human rotavirus G9P6 NC_011503 vertebrates,human 9 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF529871,AF529869, AF529868,AF529865, AF529870,AF529872, AF529867,AF529866, AF529864 Human rotavirus G9P6 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU753968 10 Human rotavirus G9P6 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU753967 11 Human rotavirus G9P[6] NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ183359 Human rotavirus G9P[6] NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ183361 Human rotavirus G9P[6] NC_011503 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ183360,AB364381, AB364371,AB364368 ,AB364372 Human rotavirus G9P[6] NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ183363 10 Human rotavirus G9P[6] NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ183362 11 Human rotavirus G9P[6] NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ183354 Human rotavirus G9P[6] NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ183353 Human rotavirus G9P[6] NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ183355 Human rotavirus G9P[6] NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ183358 Human rotavirus G9P[6] NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ183356,EU839952, EU839953 Human rotavirus G9P[8] NC_011503 vertebrates,human 11 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB364378,AB364370 ,AB364384,AB36438 3,AB364382,AB3643 77,AB364379,AB364 373,AB364374,AB36 4376,AB364375 Human rotavirus G9P[8] NC_011510 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU839960,EU839961 ,EU839962,EU83995 9 Human rotavirus HCR3A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 EU708907 Human rotavirus HCR3A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 EU708908 Human rotavirus HCR3A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU708909 Human rotavirus HCR3A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU708906 Human rotavirus HCR3A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708910 10 Human rotavirus HCR3A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708911 11 Human rotavirus HCR3A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 EU708902 Human rotavirus HCR3A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 EU708901 Human rotavirus HCR3A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 EU708903 Human rotavirus HCR3A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU708905 Human rotavirus HCR3A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU708904 Human rotavirus HMGQ35 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AF361438 Human rotavirus II type 1 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 D90260 Human rotavirus MP409 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AF143408 Human rotavirus Ro1845 NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 EU708896 Human rotavirus Ro1845 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 EU708897 Human rotavirus Ro1845 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU708898 Human rotavirus Ro1845 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU708895 Human rotavirus Ro1845 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708899 10 Human rotavirus Ro1845 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EU708900 11 Human rotavirus Ro1845 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 EU708891 Human rotavirus Ro1845 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 EU708890 Human rotavirus Ro1845 NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 EU708892 Human rotavirus Ro1845 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU708894 Human rotavirus Ro1845 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 EU708893 Human rotavirus serotype 1 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. U59109 strain M37 10 Human rotavirus serotype 2 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. U59105 strain 1076 10 Human rotavirus strain NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 AF141916 MP409 Human rotavirus strain NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 AF141917 MP409 Human rotavirus strain NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF141918 MP409 Human rotavirus strain NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AF076926 NnB1 Human rotavirus strain NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AF076925 S12/85 IDIR agent NC_021551 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 3 X16949 lkoma lyssavirus NC_018629 vertebrates,human 1 Rhabdoviridae, Lyssavirus, I koma lyssavirus seg. 3 JX193798 Influenza A virus (A/Puerto NC_002022 vertebrates,human 1 Orthomyxoviridae,Influenzavirus A,Influenza A seg. 3 V01106 Rico/8/1934(H 1N1)) virus Influenza A virus (A/Puerto NC_002016 vertebrates,human 1 Orthomyxoviridae,Influenzavirus A,Influenza A seg. 7 V01099 Rico/8/34(H 1N1)) virus Influenza A virus (A/Puerto NC_002017 vertebrates,human 1 Orthomyxoviridae,Influenzavirus A,Influenza A seg. 4 V01088 Rico/8/34(H 1N1)) virus Influenza A virus (A/Puerto NC_002018 vertebrates,human 1 Orthomyxoviridae,Influenzavirus A,Influenza A seg. 6 JQ2146 Rico/8/34(H 1N1)) virus Influenza A virus (A/Puerto NC_002019 vertebrates,human 1 Orthomyxoviridae,Influenzavirus A,Influenza A seg. 5 JQ2147 Rico/8/34(H 1N1)) virus Influenza A virus (A/Puerto NC_002020 vertebrates,human 1 Orthomyxoviridae,Influenzavirus A,Influenza A seg. 8 JQ2150 Rico/8/34(H 1N1)) virus Influenza A virus (A/Puerto NC_002021 vertebrates,human 1 Orthomyxoviridae,Influenzavirus A,Influenza A seg. 2 JQ2151 Rico/8/34(H 1N1)) virus Influenza A virus (A/Puerto NC_002023 vertebrates,human 1 Orthomyxoviridae,Influenzavirus A,Influenza A seg. 1 V00603 Rico/8/34(H 1N1)) virus Influenza B virus NC_002204 vertebrates,human 1 Orthomyxoviridae,Influenzavirus B,Influenza B seg. M14880 virus RNA 1 Influenza B virus NC_002205 vertebrates,human 1 Orthomyxoviridae,Influenzavirus B,Influenza B seg. AF101982 virus RNA 2 Influenza B virus NC_002206 vertebrates,human 1 Orthomyxoviridae,Influenzavirus B,Influenza B seg. AF102017 virus RNA 3 Influenza B virus NC_002207 vertebrates,human 1 Orthomyxoviridae,Influenzavirus B,Influenza B seg. K00423 virus RNA 4 Influenza B virus NC_002208 vertebrates,human 1 Orthomyxoviridae,Influenzavirus B,Influenza B seg. K01395 virus RNA 5 Influenza B virus NC_002209 vertebrates,human 1 Orthomyxoviridae,Influenzavirus B,Influenza B seg. JQ2095 virus RNA 6 Influenza B virus NC_002210 vertebrates,human 1 Orthomyxoviridae,Influenzavirus B,Influenza B seg. JQ2094 virus RNA 7 Influenza B virus NC_002211 vertebrates,human 1 Orthomyxoviridae,Influenzavirus B,Influenza B seg. JQ2096 virus RNA 8 Influenza C virus NC_006306 vertebrates,human 29 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB034181,AB034170 virus ,AB034165,AB03417 4,AB034157,DQ0028, AB034161,AB034169 ,AB034173,AB03418 0,AB034168,AB0341 56,AB035367,AB034 179,AB034159,AB03 4166,AB034160,AB0 34172,AB035366,AB 034164,AB034178,A B034158,AB034163, AB034176,AB034177 ,AB034175,AB03416 2,AB034167,AB0341 71 Influenza C virus NC_006307 vertebrates,human 2 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 1 M28061 ,U20228 virus Influenza C virus NC_006308 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 2 M28060 virus Influenza C virus NC_006309 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 3 M28062 virus Influenza C virus NC_006310 vertebrates,human 14 Orthomyxoviridae, Influenzavirus C, Influenza C seg. 4 M11643,M11642,M25 virus 363,M11639,M11638, M11645,K01689,M11 637, M11640,M17868, M25361,M11644, M11 641,M25362 Influenza C virus NC_006312 vertebrates,human 2 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 M17700,M22038 virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 D16260 (C/Aichi/1/81) virus Influenza C virus (C/Ann NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB283001 Arbor/1/50) virus Influenza C virus (C/Ann NC_006307 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 1 AB126191 Arbor/1/50) virus Influenza C virus (C/Ann NC_006308 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 2 AB126192 Arbor/1/50) virus Influenza C virus (C/Ann NC_006309 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 3 AB126193 Arbor/1/50) virus Influenza C virus (C/Ann NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 AB126194 Arbor/1/50) virus Influenza C virus (C/Ann NC_006311 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 5 AB126195 Arbor/1/50) virus Influenza C virus (C/Ann NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB126196 Arbor/1/50) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D63469 (C/Aomori/74) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 D16259 (C/Aomori/74) virus Influenza C virus NC_006306 vertebrates,human 2 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 M10087,AB099625 (C/California/78) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000608 (C/California/78) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000725 (C/England/83) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099627 (C/Greece/79) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099619 (C/Hiroshima/246/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099620 (C/Hiroshima/247/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099621 (C/Hiroshima/248/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099618 (C/Hiroshima/249/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099622 (C/Hiroshima/250/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099623 (C/Hiroshima/251/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099617 (C/Hiroshima/252/99) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099616 (C/Hiroshima/290/99) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000610 (C/Hyogo/1/83) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000604 (C/Johannesburg/66) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D63470 (C/Kanagawa/1/76) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000606 (C/Kanagawa/1/76) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099626 (C/Kansas/1/79) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D63472 (C/Kyoto/1/79) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000609 (C/Kyoto/1/79) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000724 (C/Kyoto/41/82) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000720 (C/Mississippi/80) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086790 (C/Miyagi/1/93) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086797 (C/Miyagi/1/94) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086806 (C/Miyagi/1/97) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086809 (C/Miyagi/1/99) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099609 (C/Miyagi/2/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086789 (C/Miyagi/2/92) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086791 (C/Miyagi/2/93) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086798 (C/Miyagi/2/94) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086800 (C/Miyagi/2/96) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086807 (C/Miyagi/2/98) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099610 (C/Miyagi/3/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086792 (C/Miyagi/3/93) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086799 (C/Miyagi/3/94) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086811 (C/Miyagi/3/99) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099611 (C/Miyagi/4/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086793 (C/Miyagi/4/93) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086801 (C/Miyagi/4/96) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086808 (C/Miyagi/4/98) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099612 (C/Miyagi/5/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086794 (C/Miyagi/5/93) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086795 (C/Miyagi/6/93) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086802 (C/Miyagi/6/96) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086796 (C/Miyagi/7/93) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086803 (C/Miyagi/7/96) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D63471 (C/Miyagi/77) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000607 (C/Miyagi/77) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086804 (C/Miyagi/8/96) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000614 (C/Miyagi/9/91) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086805 (C/Miyagi/9/96) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000726 (C/Nara/1/85) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D30697 (C/Nara/2/85) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000727 (C/Nara/2/85) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000723 (C/Nara/82) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099624 (C/NewJersey/76) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099613 (C/Saitama/1/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099614 (C/Saitama/2/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099615 (C/Saitama/3/2000) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D63468 (C/Sapporo/71) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000605 (C/Sapporo/71) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB086788 (C/Shizuoka/79) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000611 (C/Yamagata/1/86) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB002469 (C/Yamagata/1/86) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 D16261 (C/Yamagata/1/86) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000613 (C/Yamagata/10/89) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB064445 (C/Yamagata/13/98) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099605 (C/Yamagata/2/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB064443 (C/Yamagata/2/98) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099603 (C/Yamagata/2/99) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB064442 (C/Yamagata/20/96) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000721 (C/Yamagata/26/81) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099606 (C/Yamagata/3/2000) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D63473 (C/Yamagata/3/86) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB064439 (C/Yamagata/3/96) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D63503 (C/Yamagata/4/86) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099607 (C/Yamagata/6/2000) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB064444 (C/Yamagata/6/98) virus Influenza C virus NC_006310 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 4 D63467 (C/Yamagata/64) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 D16258 (C/Yamagata/64) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099608 (C/Yamagata/8/2000) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000612 (C/Yamagata/8/86) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB064440 (C/Yamagata/8/96) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB099604 (C/Yamagata/9/2000) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000728 (C/Yamagata/9/86) virus Influenza C virus NC_006306 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 7 AB064441 (C/Yamagata/9/96) virus Influenza C virus NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 AB000722 (C/pig/Beijing/115/81) virus Influenza C virus (STRAIN NC_006307 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 1 X55992 C/BERLIN/1/85) virus Influenza C virus (STRAIN NC_006312 vertebrates,human 1 Orthomyxoviridae,Influenzavirus C,Influenza C seg. 6 D26546 C/TAYLOR/1233/47) virus Ippy virus NC_007905 vertebrates,human 1 Arenaviridae,Arenavirus,Ippy virus seg. S DQ328877 Ippy virus NC_007906 vertebrates,human 1 Arenaviridae,Arenavirus,Ippy virus seg. L DQ328878 Irkut virus NC_020809 vertebrates,human 2 Rhabdoviridae,Lyssavirus,Irkut virus — JX442979,EF614260 Italian lapine rotavirus NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 DQ205225 30/96 Italian lapine rotavirus NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 DQ205227 30/96 Italian lapine rotavirus NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 DQ205228 30/96 Italian lapine rotavirus NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 DQ205229 30/96 Italian lapine rotavirus NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. DQ205230 30/96 10 Italian lapine rotavirus NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. DQ205231 30/96 11 Italian lapine rotavirus NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 DQ205222 30/96 Italian lapine rotavirus NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 DQ205221 30/96 Italian lapine rotavirus NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 DQ205223 30/96 Italian lapine rotavirus NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 DQ205226 30/96 Italian lapine rotavirus NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 DQ205224 30/96 J-virus NC_007454 vertebrates,human 1 Paramyxoviridae, J-virus — AY900001 JC polyomavirus NC_001699 vertebrates,human 592 Polyomaviridae,Polyomavirus,JC — AB262401,JF424911, polyomavirus AB092584,AB074591 ,AB127013,AB11312 1,AY366359,AB1182 33,AB127350,AB126 983,AB077869,AB18 3152,AB127346,AY5 36242,AB077859,JF4 24922,AB092582,AB 081007,JF424869,JF 424874,JF424877,AF 363833,AB081612,A B127006,AB077864,J F424835,AB048553,A Y536239,JF424859,A B362360,AB118652, AB118234,JF424952, JF425504,JF424875, JF424837,AB372036, AB262397,AY121908 ,AB113142,AY38637 7,AB038254,JF42495 8,AB113137,JF42548 9,AB048568,AF28161 7,AY121913,AB1989 46,JF425556,AB0382 52,AB103404,JF4248 85,JF424954,AB2209 41,AB048580,JF4255 51,AB081654,AB113 131,AB077866,AB12 7011,AB077879,JF42 4909,AB126991,AB2 20940,AB081018,AB 113135,AF396430,AF 300964,AB074581,A B118657,AB198940, AB074588,AY382187 ,AB048572,AB04857 6,AB081608,AB3623 63,AB127023,JF4249 42,JF424855,JF4249 08,AB048569,JF4248 43,AB103421,AB198 947,JF424880,AY121 914,JQ237146,AF363 834,AB048574,JF425 494,AB362351,AB26 2410,AY386376,AB1 27343,AF396435,AB0 92587,AB081604,JF4 24857,AB185020,AF2 81624,JF424923,JF4 25493,JF424939,AB0 81022,AB081013,AB 092579,JF424860,AB 081602,AB103387,A B262399,JF424894,A B048561,AB077873, AB127026,JF424936, AB262413,JF424864, AF300959,AB198944, AB262402,AB081030 ,AB103418,AB26241 2,AB081027,JF42487 6,AB048566,JF42490 0,AB103411,AF00435 0,AB081603,AB1273 42,AF396429,AB1186 53,AB127344,AB118 651,AB113123,AB08 1016,AB038253,AB0 77863,JF424917,AB0 81005,JF425498,AF2 81625,AB198949,JF4 24863,JF424951,JF4 24886,AB077874,JF4 25553,AY536241,JQ8 23124,AB118231,AF3 00963,JF424926,JF4 24960,JF424910,AB1 03419,AY378084,JF4 24845,AB081015,AB 048577,AB127347,A B198942,AB127352,J F424851,JF424919,A B126994,AB113118,J F424870,AB081021,A B126984,AF300953,J F424883,AB081024,A B127348,JF424892,J F424930,AB113139,A B262403,AB126993, AB127003,JF424918, JF424941,AB127002, AF363832,AB127025, AB126982,JF425490, AB103409,AB048548 ,JF424920,AF300955 ,AB074577,AB08160 5,AB081020,AY3565 39,AB212954,AB113 138,AB113126,JF424 890,JF424937,JF424 953,JF424949,AB074 585,AB113133,AB04 8554,U61771,JF4249 28,JF424938,JF4248 61,AB048557,AB212 953,AB081008,AB12 7345,AB262404,AY3 42299,JF424878,AB2 62405,AF396428,AB0 74576,AB113143,JX2 73163,AF300951,AB1 27000,AY536240,AB 262408,AB118654,AF 281626,JF424856,AB 048558,U73501,AB04 8565,AB362366,JF42 4850,AF281623,AB12 7024,AB081012,AB1 18656,JF424962,JF4 25499,AB126998,JF4 24933,AF396433,AB3 62356,AB081006,AB 074582,AB081613,A B074583,AB262396, AB092583,AF300947, AF300952,AB198943, AB081601,AY386373 ,AB081023,AB12701 8,AB198953,AB0778 75,JF425501,AB1273 51,AB126996,AB127 016,AB118235,AB09 2578,AB077860,JF42 4848,AB048575,JF42 4873,AB220943,AY3 76830,AB077872,DQ 875212,AF300954,AB 048582,JF424853,JF 425491,AB103406,JF 424893,JF424913,AY 376831,AB103405,A B077861,AF295732,J F424881,AB127021,J F424842,AB127001,J 02226,AB077857,AB 362352,AB048571,A B048547,AB113124, AB103417,AF004349, JF424945,AB198945, JF424897,AB126988, AB372037,AB048552 ,AB074589,JF424961 ,AF396432,JF424891 ,AB077871,JF424865 ,JF424935,AB126981 ,JF424879,AB081616 ,AF396427,JF424895 ,AF300957,AB127007 ,AY378086,JF424866 ,AB220942,JF424839 ,AY378087,AB10342 2,AB081025,AB1131 19,AF300946,AB1132 17,AB103412,AB081 019,AB113122,AF300 960,JF425554,AB077 855,JF424959,AB104 487,AB081614,AB04 8564,AB103415,AB1 13140,AB092585,AB 198952,AB077877,A B126999,JF424957,A B362357,AB048560, AB198954,AB081611 ,JF425503,JF424882, AB113129,JF424905, JF424871,JF425552, AB048559,DQ875211 ,AB118232,AB07786 7,AB113130,AB1270 22,JF424947,AF3964 24,AB113216,AY121 912,AB048567,AB08 1615,AF300948,AF30 0962,AB362355,AY3 49147,JF424862,AB0 77865,JF424852,AB1 95639,JF424899,JF4 24906,AB126985,AY 382184,JF424844,JF 424925,JF424903,AB 103414,AB127004,A B074575,AB103407, AB118658,AB262406 ,AB103413,JF424916 ,JF424931,AB081017 ,AF363831,JF424944 ,AB103403,AB04856 3,AB077862,AF36383 0,JF424898,AB08101 1,AB127015,JF42492 9,JF424927,AB07786 8,AF396434,AB08101 0,AY328376,AB0485 62,AB038251,U73500 ,AB103402,AB22093 9,AB126990,AB0810 29,JF424902,AF3009 65,JF424849,AB0816 07,JF424921,JF4248 68,AB077858,JF4249 32,JF424872,JF4249 48,AF396426,AB3623 62,AF396423,JF4249 04,AF281615,AF3009 49,JF424896,AB0816 10,AB127008,AY376 828,JF424950,AB081 009,AF300958,AF295 731,AB262400,AB26 2398,AY376829,AB1 27012,JF425502,AB1 26987,AB081606,AY 386378,AB048570,A B118655,AB048546, AY121915,AB113132 ,AB372038,AB03825 5,AY378085,JF42488 8,AB081618,AB3623 53,AY536243,AB126 992,AB092580,AB07 7856,JF424924,AB36 2364,JF425492,JF42 4955,AB048556,AB0 77870,AB126989,JF4 24907,AY364314,AF0 30085,AB262411,AB 127349,AB126986,A Y121909,AY386374,J F424854,AB074586,J F424847,AY121907,A B074579,JF425555,A B113141,AB077876, AB103423,AB118659 ,AB113144,AB19564 0,AB103420,AB2624 07,JF424901,AF2816 16,JF424858,AB1131 34,JF425500,AY1219 11,AB362359,U73502 ,AB081600,AB11313 6,AB113125,AB1131 45,JF424834,AF3964 22,AY382188,AY386 375,AB092581,AB10 3416,JF425488,JF42 4943,AB198948,AB2 12952,AF300967,AB0 48545,AB081617,AB 113120,EU835194,JF 424841,AB048581,A B074590,JF424956,J F424912,AB048579,A B081028,AB048549, AB074578,AB362361 ,JF425495,AB126997 ,AB198941,AY38218 5,AB038250,JF42549 7,JF424846,JF42491 4,AB198951,AB1270 10,AF300956,JF4248 67,AB362358,AB262 409,AY382186,AB03 8249,JF424934,AB04 8550,JF424884,AB04 8573,JF424838,AB07 4584,AY373463,AB0 74580,AB127017,AB 048551,AF300945,AB 362365,AB081609,JF 424946,AB113127,A B113128,AB048555, AB127353,AB077878 ,JF424915,AF295738 ,AB092586,AF300950 ,JF424889,AB127027 ,AY121910,AB12702 0,AB103408,JF42484 0,AB127005,AB3623 54,JF424836,AB0810 26,AB126995,JF4254 96,AF396431,AF3009 61,AB127014,AB103 410,AF300966,AF396 425,AB198950,AB08 1014,JF424887,AB12 7019,AB048578,AB0 74587,AB127009,JF4 24940 Junin virus NC_005080 vertebrates,human 16 Arenaviridae,Arenavirus,Junin virus seg. L JF799977,HQ126698, JF799978,JF799979, AY619640,JN801477, JN714130,FJ805377, AY216507,JF799980, AY819707,AY358022 ,AY746354,FJ805379 ,DQ489718,HQ12670 0 Junin virus NC_005081 vertebrates,human 30 Arenaviridae,Arenavirus,Junin virus seg. S GQ121040,DQ53148 8,DQ854738,DQ8547 30,DQ854739,DQ854 731,HQ126699,JF799 983,AY746353,AY61 9641,DQ854736,DQ8 54737,FJ805378,AY3 58023,FJ969442,DQ8 54733,JF799984,DQ8 54732,JF799981,JF7 99982,JN714129,D10 072,DQ854735,JN80 1476,DQ854734,HQ1 26701,DQ272266,FJ8 05380,DQ531486,JN 200801 K1 polyomavirus NC_009238 vertebrates,human 6 Polyomaviridae,Polyomavirus,KI polyomavirus — EU358767,EF520287 ,EF520288,EU35876 6,EF127906,EF52028 9 K1 polyomavirus Stockholm NC_009238 vertebrates,human 1 Polyomaviridae,Polyomavirus,KI polyomavirus — EF127907 350 K1 polyomavirus Stockholm NC_009238 vertebrates,human 1 Polyomaviridae,Polyomavirus,KI polyomavirus — EF127908 380 Lagos bat virus NC_020807 vertebrates,human 5 Rhabdoviridae,Lyssavirus,Lagos bat virus — EU259198,GU170202 ,EU293108,EU29311 0,JX901139 Lake Victoria marburgvirus NC_001608 vertebrates,human 14 Filoviridae,Marburgvirus,Marburg — FJ750954,FJ750953, marburgvirus Z29337,AY358025,Z1 2132,FJ750956,FJ75 0957,AY430365,FJ75 0959,AY430366,DQ2 17792,FJ750958,FJ7 50955,GQ433353 Lake Victoria NC_001608 vertebrates,human 8 Filoviridae,Marburgvirus,Marburg — DQ447658,DQ44765 marburgvirus- marburgvirus 9,DQ447654,DQ4476 Angola2005 60,DQ447656,DQ447 653,DQ447657,DQ44 7655 Lake Victoria NC_001608 vertebrates,human 1 Filoviridae,Marburgvirus,Marburg — EF446132 marburgvirus- Ci67 marburgvirus Lake Victoria NC_001608 vertebrates,human 3 Filoviridae,Marburgvirus,Marburg — DQ447650,DQ44765 marburgvirus- marburgvirus 2,DQ44765 DRC1999 1 Filoviridae,Marburgvirus,Marburg — JN408064 Leiden marburgvirus Lake Victoria NC_001608 vertebrates,human 2 Filoviridae,Marburgvirus,Marburg — DQ447649,EF446131 marburgvirus-Ravn marburgvirus Lamb rotavirus NC_011500 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 5 HQ834202,FJQ31019 Lamb rotavirus NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 HQ834204,FJQ31020 Lamb rotavirus NC_011502 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 8 HQ834203,FJQ31021, JQ031147 Lamb rotavirus NC_011503 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 9 HQ834201,FJQ31029 Lamb rotavirus NC_011504 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. HQ834205,JQ031148 10 ,FJQ31022,AY219873 Lamb rotavirus NC_011505 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. FJQ31023,HQ834206, 11 JQ031151,AY622998 Lamb rotavirus NC_011506 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 2 HQ834198,JQ013503 ,FJQ31025 Lamb rotavirus NC_011507 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 1 JQ013502,HQ834197 ,FJQ31024 Lamb rotavirus NC_011508 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 3 HQ834207,FJQ31026, JQ013504 Lamb rotavirus NC_011509 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus A seg. 6 JQ031150,L11602,L1 1595,HQ834200,FJQ3 1028, L11596 Lamb rotavirus NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 HQ834199,FJQ31027, L11599 Lapine rotavirus NC_011500 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 5 AF084549,AF084550, JQ423897,AF084551 Lapine rotavirus NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JQ423899 Lapine rotavirus NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JQ423898 Lapine rotavirus NC_011503 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 9 U62153,JQ423907 Lapine rotavirus NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JQ423900 10 Lapine rotavirus NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JQ423901 11 Lapine rotavirus NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JQ423903 Lapine rotavirus NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JQ423902 Lapine rotavirus NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JQ423904 Lapine rotavirus NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JQ423906 Lapine rotavirus NC_011510 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 4 U62150,JQ423905,U 62151,U62152,U6214 9 Lapine rotavirus strain BAP NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF144796 (wildtype) 10 Lapine rotavirus strain NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF144795 BAP-2 10 Lapine rotavirus strain C-11 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF144793 10 Lapine rotavirus strain R-2 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF144794 10 Lassa virus NC_004296 vertebrates,human 16 Arenaviridae,Arenavirus,Lassa virus seg. S AY628208,X52400,A F181854,AY628201,A F333969,AY628207,A Y628206,HQ688672, AF246121,AY628205, AY628203,HQ688673 ,AF181853,JQ4324,A Y179173,FR832711 Lassa virus NC_004297 vertebrates,human 11 Arenaviridae,Arenavirus,Lassa virus seg. L HQ688675,AY179172 ,AY628204,U63094,A Y179171,AY179174,F R832710,AY628200, U73034,HQ688674,A Y628202 Latino virus NC_010758 vertebrates,human 2 Arenaviridae,Arenavirus,Latino virus seg. S AF485259,AF512830 Latino virus NC_010760 vertebrates,human 1 Arenaviridae,Arenavirus,Latino virus seg. L EU627612 Lechiguanas virus NC_003466 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. S AF482714 Lechiguanas virus NC_003467 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. M AF028022 Lloviu virus NC_016144 vertebrates,human 1 Filoviridae,Lloviu virus — JF828358 Lordsdale virus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — X86557 Lujo virus NC_012776 vertebrates,human 2 Arenaviridae,Arenavirus,Lujo virus seg. S JXQ17360,FJ952384 Lujo virus NC_012777 vertebrates,human 2 Arenaviridae,Arenavirus,Lujo virus seg. L JXQ17362,FJ952385 Luna virus NC_016152 vertebrates,human 5 Arenaviridae,Arenavirus,Luna virus seg. S AB586644,AB697691 ,AB586646,AB70294 0,AB693148 Luna virus NC_016153 vertebrates,human 5 Arenaviridae,Arenavirus,Luna virus seg. L AB693149,AB586645 ,AB586647,AB70294 1,AB697692 Lunk virus NKS-1 NC_018710 vertebrates,human 1 Arenaviridae,Arenavirus,Lunk virus NKS-1 — AB693150 Lunk virus NKS-1 NC_018711 vertebrates,human 1 Arenaviridae,Arenavirus,Lunk virus NKS-1 — AB693151 Lymphocytic NC_004291 vertebrates,human 16 Arenaviridae,Arenavirus,Lymphocytic seg. L JN872494,EU480451, choriomeningitis virus choriomeningitis virus DQ868488,EU195889 ,JQ4331,AB627954,E U480453,DQ868484, DQ286932,DQ86848 6,AB627956,AB4775 30,DQ361066,GQ862 981,AB627955,AF004 519 Lymphocytic NC_004294 vertebrates,human 25 Arenaviridae,Arenavirus,Lymphocytic seg. S JN872495,AY847351, choriomeningitis virus choriomeningitis virus EU480452,AB627952 ,AB261991,DQ86848 5,DQ361065,FJ89588 2,DQ286931,DQ8684 87,FJ895883,AF3252 14,AF325215,M2213 8,FJ895884,AB26199 0,GQ862982,DQ1189 59,AB627951,JN6879 49,AB627953,EU480 450,M20869,AY8473 50,DQ868483 Macaca fascicularis NC_015691 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — GU014531 papillomavirus 2 lomavirus 6 Macaca fascicularis NC_001531 vertebrates,human 1 Papillomaviridae,Betapapillomavirus,Betapapil — EF028290 papillomavirus type 1 lomavirus 1 Machupo virus NC_005078 vertebrates,human 3 Arenaviridae,Arenavirus,Machupo virus seg. S JN794584,AY129248, JN794586 Machupo virus NC_005079 vertebrates,human 3 Arenaviridae,Arenavirus,Machupo virus seg. L AY358021,JN794583, JN794585 Maciel virus NC_003466 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. S AF482716 Mamastrovirus 1 NC_001943 vertebrates,human 1 Astroviridae,Mamastrovirus,Mamastrovirus 1 — Z25771 Maporal virus NC_003466 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. S AY267347 Maporal virus NC_003467 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. M AY363179 Mapuera virus NC_009489 vertebrates,human 1 Paramyxoviridae,Rubulavirus,Mapuera virus — EF095490 Marburg marburgvirus NC_001608 vertebrates,human 36 Filoviridae,Marburgvirus,Marburg — JX458844,JX458854, marburgvirus JX458858,JX458852, JX458847,JX458827, JX458843,JX458830, JX458833,JX458850, JX458857,JX458849, JX458842,JX458831, JX458835,JX458826, JX458836,JX458851, JX458825,KC545388, JX458856,JX458845, JX458838,JX458834, JX458846,JX458829, JX458848,JX458837, JX458828,JX458832, JX458841,JX458853, JX458839,KC545387, JX458855,JX458840 Measles virus NC_001498 vertebrates,human 50 Paramyxoviridae,Morbillivirus,Measles virus — EU435017,DQ345721 ,AB481088,EU29355 0,K01711,E04903,DQ 227318,BD137596,B D137590,EU293551, AY730614,AB254456 ,FJ416067,AB016162 ,AB046218,DQ22732 1,AB591381,JF72765 0,BD137593,AF2662 88,FJ161211,JF7276 49,FJ211590,DQ3457 22,HM439386,Z6651 7,DQ227320,FJ21158 3,BD137595,AB0129 49,EU293552,DQ211 902,AB481087,GQ37 6027,EU293549,GQ3 76026,BD137592,AB 032167,BD137591,D 0345723,BD137597, FJ416068,S58435,JF 791787,EF033071,E U293548,BD137594, DQ227319,AB012948 ,FJ211589 Measles virus genotype D4 NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — KC164757 Measles virus genotype G3 NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — KC164758 Measles virus strain AIK-C NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — AF266286 Measles virus strain NC_001498 vertebrates,human 3 Paramyxoviridae,Morbillivirus,Measles virus — AY486083,AY486084 Edmonston-Zagreb ,AF266290 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635406 MVi/Arizona,USA/11,08/2 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635410 MVi/California,USA/16,03 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635409 MVi/California,USA/8,04 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635403 MVi/Florida,USA/19,09 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635408 MVi/New Jersey,USA/45,05 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635402 MVi/New York,USA/26,09/3 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635411 MVi/Pennsylvania,USA/20, 09 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635407 MVi/Texas,USA/4,07 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635404 MVi/Virginia,USA/15,09 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — JN635405 MVi/VVashington, USA/18,0 8/1 Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — AF266287 Moraten Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — AF266289 Rubeovax Measles virus strain NC_001498 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Measles virus — AF266291 Schwarz Menangle virus NC_007620 vertebrates,human 2 Paramyxoviridae,Rubulavirus,Menangle virus — AF326114,JX112711 Merkel cell polyomavirus NC_010277 vertebrates,human 41 Polyomaviridae,Polyomavirus,Merkel cell — HM011552,HM01155 polyomavirus 5,HM011554,KC2028 10,JN383840,JQ4793 19,EU375803,HM011 557,JN383838,FJ173 815,HM011547,HM01 1542,HM011544,JN3 83841,HM011538,EU 375804,HM011550,J 0479315,HM011556, JF813001,JQ479320, HM355825,JF813000 ,HM011543,FJ46433 7,HM011546,HM0115 40,JF812999,HM011 548,HM011553,JF81 3002,JN383839,HMO 11551,HM011545,JQ 479317,JF813003,H M011549,HM011539, JQ479316,HM011541 ,JQ479318 Mobala virus NC_007903 vertebrates,human 1 Arenaviridae,Arenavirus,Mobala virus seg. S AY342390 Mobala virus NC_007904 vertebrates,human 1 Arenaviridae,Arenavirus,Mobala virus seg. L DQ328876 Mokola virus NC_006429 vertebrates,human 7 Rhabdoviridae,Lyssavirus,Mokola virus — KF155007,EU293117 ,KF155008,Y09762,K F155005,KF155006,E U293118 Mopeia Lassa reassortant NC_006572 vertebrates,human 1 Arenaviridae,Arenavirus,Mopeia Lassa virus seg. L AY772167 29 reassortant 29 Mopeia Lassa reassortant NC_006573 vertebrates,human 1 Arenaviridae,Arenavirus,Mopeia Lassa virus seg. S AY772168 29 reassortant 29 Mopeia virus NC_006574 vertebrates,human 1 Arenaviridae,Arenavirus,Mopeia virus seg. L DQ328875 Mopeia virus NC_006575 vertebrates,human 2 Arenaviridae,Arenavirus,Mopeia virus seg. S DQ328874,M33879 Mopeia virus AN20410 NC_006574 vertebrates,human 1 Arenaviridae,Arenavirus,Mopeia virus seg. L AY772169 Mopeia virus AN20410 NC_006575 vertebrates,human 1 Arenaviridae,Arenavirus,Mopeia virus seg. S AY772170 Morogoro virus NC_013057 vertebrates,human 1 Arenaviridae,Arenavirus,Morogoro virus seg. S EU914103 Morogoro virus NC_013058 vertebrates,human 1 Arenaviridae,Arenavirus,Morogoro virus seg. L EU914104 Mossman virus NC_005339 vertebrates,human 1 Paramyxoviridae, Mossman virus — AY286409 Mumps virus NC_002200 vertebrates,human 50 Paramyxoviridae,Rubulavirus,Mumps virus — AF314560,AB000386, JX287385,AB744048, DQ649478,FJ375178, FJ211584,AXQ81123, JX287387,HQ416906 ,HQ416907,JF727652 ,AF314559,AXQ81134 ,AB470486,AB57676 4,AF201473,AY30906 0,FJ375177,AY68149 5,JX287390,AF28079 9,AF314562,EU3702 06,AB600942,FJ2115 85,JN012242,AB0003 87,AB600843,AB744 049,JF727651,GU980 052,AXQ81133,FJ211 586,AB040874,AB0O 0388,JN635498,AF46 7767,AF314561,EU3 70207,FJ556896,EU8 84413,AF314558,AB8 27968,JX287389,JX2 87388,AY669145,JX2 87386,AY508995,JX2 87391 Mumps virus strain Jeryl NC_002200 vertebrates,human 3 Paramyxoviridae,Rubulavirus,Mumps virus — FN431985,AF345290, Lynn AF338106 Mumps virus strain L- NC_002200 vertebrates,human 2 Paramyxoviridae,Rubulavirus,Mumps virus — AY685920,AY685921 Zagreb Murine pneumonia virus NC_006579 vertebrates,human 1 Paramyxoviridae,Pneumovirus,Murine — AY729016 pneumonia virus Nariva virus NC_017937 vertebrates,human 1 Paramyxoviridae, Nariva virus — FJ362497 Newcastle disease virus NC_002617 vertebrates,human 216 Paramyxoviridae,Avulavirus,Newcastle — KC542892,KC152049 disease virus ,JN986838,KC542900 ,JF966387,KC920893 ,KC542904,HM11772 0,JQ979176,HQ4127 67,JX443519,JX1930 74,JF343539,FJ4301 60,GQ338309,GQ849 007,KC542897,AY93 5495,FJ436302,HM3 57251,HM125898,JQ 013039,FJ386392,BD 218398,JX532092,JX 193081,DQ485231,JF 343538,HQ697254,A Y562986,GQ994433, KC894391,EU293914 ,AY935493,KC84423 5,HQ902590,GQ2883 78,DQ486859,JX401 403,GQ918280,HQ31 7395,AY935496,HQ7 17357,FJ766527,JX4 01404,JN653340,JX1 93079,AB524406,KC 542902,JN800306,FJ 754271,JF950510,AY 935499,JX390609,D 0659677,JQ015296, HM063424,JX316216 ,AB534205,Y18898,F J436305,HM063425, KC542896,AY935494 ,HQ697255,KC55196 7,FJ794269,KC54289 3,JQ993431,KC5429 13,HQ266602,JX193 083,AY225110,AY93 5489,GQ288389,JF8 27027,HM063423,FJ 751918,GU187941,J N599167,GQ288391, FJ872531,GQ994434 ,AY741404,HM06342 2,AY935497,HQ0083 37,GQ338310,JXQ12 096,KC542914,AY93 5492,KC934169,FJ38 6393,JX393313,KF77 1883,HM188399,JF9 50509,EU289028,AY 562987,AY562985,JX 193078,FJ436303,JN 688863,AY865652,JN 400896,KF727980,G 0288390,KC542908, JF893453,AY935498, GU143550,KC152048 ,KC542901,JQ01529 5,JN400895,KC90618 8,JN688862,FJ98619 2,KC542905,EU2890 29,FJ386396,JN6183 49,EU140955,FJ4363 06,GU978777,JX524 203,JX401405,JN653 339,FJ766529,JN682 211,JF827026,JX193 082,JN682210,GQ28 8392,HQ839733,AF0 77761,JN688865,DQ 060053,AB524405,K C542911,KF740478, DQ839397,KC461214 ,KC542906,JQ71394 4,JN986837,GU5643 99,AY562990,GQ288 380,GQ338311,AY56 2989,FJ766526,GU58 5905,AXQ08510,KC9 34170,FJ386395,JF9 66385,KC542903,AY 845400,JF340367,JQ 015297,FJ430159,KC 542907,KC542910,E U167540,DQ485229, KC246549,AY935491 ,AY562991,JX193075 ,HQ317394,JF966386 ,JX193080,FJ939313, DQ485230,JX854452 ,EF065682,JX974435 ,GQ429293,JX11063 5,FJ754272,FJ75191 9,KC542898,FJ76653 0,FJ386394,AF43174 4,EU546165,FJ75427 3,DQ097394,EF2018 05,AY935500,FJ7665 28,FJ436304,GQ288 379,JQ247691,JN400 897,JN986839,JX119 193,JX193076,KC542 894,KC542912,HQ26 6603,JX193077,JN68 8864,FJ766531,JF79 5531,KC542895,GQ2 88377,KC542909,DQ 097393,AY562988,A Y935490,JN631747,J N618348,JX519467,K C542899 Newcastle disease virus B1 NC_002617 vertebrates,human 2 Paramyxoviridae,Avulavirus,Newcastle — AF375823,AF309418 disease virus Nipah virus NC_002728 vertebrates,human 11 Paramyxoviridae,Henipavirus,Nipah virus — AJ627196,JN808857, AJ564621,AY029768, FJ513078,AF212302, JN808863,AJ564622, AJ564623,AY988601, AY029767 Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AF097917 Bo/Newbury2/1976/UK Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GU017903 Hu/8533/Maizuru/08/JPN Norovirus Hu/Chiba/04- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB220921 1050/2005/JP Norovirus Hu/G1,1/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF429773 8CKII Ic/1974/USA Norovirus Hu/G1,1/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JXQ23285 8FI la/1968/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF429783 Hu/GI,1/8K/1979/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF429789 Hu/GI,1/8MC/1978/USA Norovirus Hu/G1,1/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF429770 8McI11/1973/USA Norovirus Hu/GI,1/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF429761 8Moll I L/1972/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF429774 Hu/G1,1/8U11If/1973/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF429765 Hu/GI,1/8W/1951/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039731 Hu/GI,1/CH4XQ533/2009/ USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039728 Hu/GI,1/CHA2A014/ 2008/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039735 Hu/GI,1/CHA3A007/ 2008/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039732 Hu/GI,1/CHA5A010/ 2009/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039727 Hu/GI,1/CHA6A003_20091 028/2009/U SA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039726 Hu/GI,1/CHA6A003_20091 031/2009/U SA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039737 Hu/GI,1/CHA6A003_20091 104/2009/U SA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039729 Hu/GI,1/CHA6A007/ 2010/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039734 Hu/GI,1/CHA6A014/ 2009/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039725 Hu/GI,1/CHA7A009/ 2010/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039736 Hu/GI,1/CHA7A011/ 2010/USA Norovirus Hu/GI,1/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039730 CHA9A004_20110 419/2011/USA Norovirus Hu/GI,1/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF039733 CHA9A004_20110 426/2011/USA Norovirus Hu/G1,2/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF306212 Jingzhou/2013401/ CHN Norovirus Hu/GI,2 NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — FJ515294 /Leuven/2003/BEL Norovirus Hu/G1,6/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ388274 Kingston/ACT160D /2010/AU Norovirus Hu/GI/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ911594 10360/2010/VNM Norovirus Hu/G1/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409317 30257/2009/VNM Norovirus Hu/GI/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB187514 Otof uke/1979/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541201 4/Aichi1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541202 4/Aichi1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541203 4/Aichi2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541204 4/Aichi2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447446 4/Aichi3/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541205 4/Aichi3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541206 4/Aichi3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447447 4/Aichi4/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541207 4/Aichi4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541208 4/Aichi4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541209 4/Aichi5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541210 4/Aichi5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447436 4/Akita1/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541211 4/Akita1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447437 4/Akita2/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541213 4/Akita2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541214 4/Akita3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541215 4/Akita3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447438 4/Akita4/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541216 4/Akita4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447439 4/Akita5/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541217 4/Akita5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447432 4/Aomori1/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541218 4/Aomori1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541219 4/Aomori1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447433 4/Aomori2/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541220 4/Aomori2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541222 4/Aomori3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541223 4/Aomori3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447434 4/Aomori4/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541224 4/Aomori4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541225 4/Aomori4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447435 4/Aomori5/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541226 4/Aomori5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541227 4/Aomori5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ622197 4/CBNU2/2007/KR Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400599 4/CGMHQ1/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400600 4/CGMHQ2/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400601 4/CGMHQ3/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400602 4/CGMHQ4/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400603 4/CGMHQ5/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400604 4/CGMHQ6/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400605 4/CGMHQ7/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400606 4/CGMHQ8/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400607 4/CGMHQ9/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400608 4/CGMH10/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400609 4/CGMH11/2006/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400610 4/CGMH12/2007/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400611 4/CGMH13/2007/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400612 4/CGMH14/2007/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400613 4/CGMH15/2007/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400614 4/CGMH16/2007/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400615 4/CGMH17/2007/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400616 4/CGMH18/2008/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400617 4/CGMH19/2009/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400618 4/CGMH20/2009/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400619 4/CGMH21/2010/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400620 4/CGMH22/2010/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400621 4/CGMH23/2010/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400622 4/CGMH24/2010/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400623 4/CGMH25/2010/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400624 4/CGMH26/2010/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JN400625 4/CGMH27/2010/TW Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus JN400626 4/CGMH28/2010/TW Norovirus Hu/GII-4/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — FJ514242 CUK-3/2008/KR Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541228 4/Chiba1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541229 4/Chiba1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541230 4/Chiba2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541231 4/Chiba2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541232 4/Chiba4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541233 4/Chiba4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541234 4/Chiba5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541235 4/Chiba5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447453 4/Ehime1/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541236 4/Ehime1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541237 4/Ehime1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447454 4/Ehime2/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541238 4/Ehime2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541239 4/Ehime3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541240 4/Ehime3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541241 4/Ehime4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541242 4/Ehime4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447455 4/Ehime5/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541243 4/Ehime5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB543808 4/FUMI/2010/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541244 4/Fukui1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541245 4/Fukui2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541246 4/Fukui2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541247 4/Fukui4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541248 4/Fukui4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541249 4/Fukui5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541250 4/Fukui5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447451 4/Hiroshima1/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541251 4/Hiroshima1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541252 4/Hiroshima1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447452 4/Hiroshima2/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541253 4/Hiroshima2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541254 4/Hiroshima2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541255 4/Hiroshima3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541256 4/Hiroshima3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541257 4/Hiroshima4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541258 4/Hiroshima4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541259 4/Hiroshima5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447427 4/Hokkaido1/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541260 4/Hokkaido1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541261 4/Hokkaido1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447428 4/Hokkaido2/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541262 4/Hokkaido2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541263 4/Hokkaido2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447429 4/Hokkaido3/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541264 4/Hokkaido3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447430 4/Hokkaido4/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541265 4/Hokkaido4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541266 4/Hokkaido4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447431 4/Hokkaido5/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541267 4/Hokkaido5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541268 4/Hokkaido5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541269 4/Iwate1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541270 4/Iwate2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541271 4/Iwate3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541272 4/Iwate3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541273 4/Iwate4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541274 4/Iwate4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541275 4/Iwate5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541276 4/Iwate5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447459 4/Kumamoto1/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541277 4/Kumamoto1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447460 4/Kumamoto2/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541278 4/Kumamoto2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447461 4/Kumamoto3/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541279 4/Kumamoto3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447462 4/Kumamoto4/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541280 4/Kumamoto4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447463 4/Kumamoto5/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541281 4/Miyagi1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447440 4/Miyagi2/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541282 4/Miyagi2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541283 4/Miyagi3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447441 4/Miyagi4/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447442 4/Miyagi5/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541284 4/Miyagi5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541288 4/Miyazaki1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541289 4/Miyazaki1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541285 4/Miyazaki10/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541286 4/Miyazaki12/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541287 4/Miyazaki13/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541290 4/Miyazaki2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541291 4/Miyazaki2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541292 4/Miyazaki3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541293 4/Miyazaki3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541294 4/Miyazaki4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541295 4/Miyazaki4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541296 4/Miyazaki5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541297 4/Miyazaki6/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541298 4/Miyazaki7/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541299 4/Miyazaki8/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541301 4/Nagano1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541302 4/N agano1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541303 4/Nagano2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541304 4/Nagan02/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541305 4/Nagano3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541306 4/Nagan03/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541307 4/Nagan04/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541308 4/Nagano5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541309 4/Niigata1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541310 4/Niigata1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541311 4/Niigata2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541312 4/Niigata2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541313 4/Niigata3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541314 4/Niigata3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541315 4/Niigata4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541316 4/Niigata4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541317 4/Niigata5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541318 4/Niigata5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541319 4/0saka1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541320 4/0saka1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541321 4/05aka2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541322 4/05aka2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541323 4/05aka3/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541324 4/05aka3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541325 4/05aka4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541326 4/05aka4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541327 4/05aka5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541328 4/0saka5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541329 4/0saka6/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447456 4/Saga1/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541330 4/Saga1/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541331 4/Saga1/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541332 4/Saga2/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541333 4/Saga2/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541334 4/Saga3/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447457 4/Saga4/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541335 4/Saga4/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541336 4/Saga4/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447458 4/Saga5/2006/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541337 4/Saga5/2007/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541338 4/Saga5/2008/JP Norovirus Hu/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541339 4/Sakai 1/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541340 4/Sakai 1/2008/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447448 4/Sakai2/2006/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus AB541341 4/Sakai2/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447449 4/Sakai3/2006/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541342 4/Sakai3/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541343 4/Sakai3/2008/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447450 4/Sakai4/2006/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541344 4/Sakai4/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541345 4/Sakai4/2008/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541346 4/Shimane1/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541347 4/Shimane2/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541349 4/Shimane3/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541350 4/Shimane3/2008/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541351 4/Shimane4/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541352 4/Shimane5/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541353 4/Shimane5/2008/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447443 4/Toyama1/2006/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541354 4/Toyama1/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541355 4/Toyama2/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541356 4/Toyama2/2008/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541357 4/Toyama3/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541358 4/Toyama3/2008/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447444 4/Toyama4/2006/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541359 4/Toyama4/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541360 4/Toyama4/2008/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB447445 4/Toyama5/2006/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541361 4/Toyama5/2007/JP Norovirus H u/GII- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB541362 4/Toyama5/2008/JP Norovirus Hu/G11,12/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — HQ664990 HS206/2010/USA Norovirus Hu/G11,12/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — HQ449728 HS210/2010/USA Norovirus Hu/GII,3/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GU980585 C BN U1/2006/K0R Norovirus Hu/GII,3/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF306213 Jingzhou/ 2013402/CHN Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ798158 Hu/GII,4/5M/USA/2004 Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GQ845369 Hu/GII,4/Armidale/ NSW390I/2008/AU Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — HM748971 Hu/G11,4/Beecroft/ NSW305P/2009/AUS Norovirus Hu/G II ,4/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — FJ537135 CH DC2094/1974/ US Norovirus Hu/G II ,4/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — FJ537136 CH DC3967/1988/ US Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — FJ537137 Hu/GII,4/CHDC4108/1987/ US Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — FJ537138 Hu/GII,4/CHDC4871/1977/ US Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — FJ537134 Hu/GII,4/CHDC5191/1974/ US Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JXQ23286 Hu/GII,4/CHDC5191/1974/ USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC576912 Hu/GII,4/GP13111/2011/ USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC576909 Hu/GII,4/GP2411/2011/ USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GU325839 Hu/GII,4/HS194/2009/US Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — DQ078814 Hu/G11,4/Hunter504D/ 040/AU Norovirus Hu/GII,4/JB- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — HQ009513 15/KOR/2008 Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC577174 Hu/GII,4/Jiangsu1/2011/ CHN Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC577175 Hu/GII,4/Jiangsu2/2012/ CHN Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF306214 Hu/GII,4/Jingzhou/ 2013403/CHN Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — EF187497 Hu/GII,4/Kenepuru/ NZ327/2006/NZL Norovirus Hu/GII,4/MD- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — DQ658413 2004/2004/US Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712499 Hu/GII,4/NIHIC1,16/ 2012/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712504 Hu/GII,4/NIHIC11,3/ 2013/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712501 Hu/GII,4/NIHIC17,6/ 2012/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712491 Hu/GII,4/NIHIC17,8/ 2013/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712498 Hu/GII,4/NIHIC17,9/ 2013/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712510 Hu/GII,4/NIHIC2,2/ 2010/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712496 Hu/GII,4/NIHIC2,3/ 2010/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712497 Hu/GII,4/NIHIC27,2/ 2012/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712508 Hu/GII,4/NIHIC28,6/ 2012/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712502 Hu/GII,4/NIHIC35/ 2013/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ613552 H u/G II ,4/N SW 123B/2010/AU Norovirus Hu/GII,4/New NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GU445325 Orleans1805/2009/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JX126913 Hu/G11,4/Ohio/7G/ 2012/USA Norovirus Hu/G11,4/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JX126912 Ohio/71/2012/USA Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GQ845367 Hu/G11,4/Orange/ NSW001P/2008/AU Norovirus 87R/2007/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GQ845024 Hu/GII,4/Rathmines/NSW2 AUS Norovirus Hu/GII,4/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — EF684915 Shellharbour/NSW 696T/2006/AUS Norovirus Hu/GII,4/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GQ845368 Sutherland/NSW5 05G/2007/AUS Norovirus Hu/G II ,4/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — HM748972 Teralba/NSW881Z/ 2009/AUS Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — HM748973 Hu/GII,4/Turramurra/ NSW892U/2009/AUS Norovirus Hu/GII,4/ NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GQ845366 Westmead/NSW3 639/2008/AUS Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KF712509 Hu/GII,6/NIHIC34,1/ 2013/USA Norovirus Hu/GII,e- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GQ845370 GII,12/StGeorge/ 199U NSW/2008/AU Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ911595 Hu/GII/10002/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ911596 Hu/GII/10003/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ911597 Hu/GII/10012/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JQ911598 Hu/GII/10037/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409238 Hu/GII/10101/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409239 Hu/GII/10127/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409240 Hu/GII/10370/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409241 Hu/GII/10405/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409242 Hu/GII/10406/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409243 Hu/GII/10411/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409244 Hu/GII/10420/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409245 Hu/GII/20048/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409246 Hu/GII/20064/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409247 Hu/GII/20079/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409248 Hu/GII/20107/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409249 Hu/GII/20108/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409250 Hu/GII/20144/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409251 Hu/GII/20146/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409252 Hu/GII/20150/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409253 Hu/GII/20151/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409254 Hu/GII/20153/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409255 Hu/GII/20154/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409256 Hu/GII/20156/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409257 Hu/GII/20159/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409258 Hu/GII/20161/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409259 Hu/GII/20162/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409260 Hu/GII/20164/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409261 Hu/GII/20171/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409262 Hu/GII/20172/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409263 Hu/GII/20173/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409264 Hu/GII/20176/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409265 Hu/GII/20180/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409266 Hu/GII/20182/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409267 Hu/GII/20184/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409268 Hu/GII/20185/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409269 Hu/GII/20187/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409270 Hu/GII/20189/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409271 Hu/GII/20190/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409272 Hu/GII/20192/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409273 Hu/GII/20196/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409274 Hu/GII/20198/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409275 Hu/GII/20202/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409276 Hu/GII/20205/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409277 Hu/GII/20206/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409278 Hu/GII/20208/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409279 Hu/GII/20215/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409280 Hu/GII/20217/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409281 Hu/GII/20229/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409282 Hu/GII/20230/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409283 Hu/GII/20233/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409284 Hu/GII/20248/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409285 Hu/GII/20258/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409286 Hu/GII/20263/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409287 Hu/GII/20271/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409288 Hu/GII/20276/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409289 Hu/GII/20302/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409290 Hu/GII/20344/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409291 Hu/GII/20350/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409292 Hu/GII/20357/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409293 Hu/GII/20365/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409294 Hu/GII/20373/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409295 Hu/GII/20407/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409296 Hu/GII/20413/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409297 Hu/GII/20424/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409298 Hu/GII/20448/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409299 Hu/GII/20457/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409300 Hu/GII/20460/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409301 Hu/GII/20469/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409302 Hu/GII/20477/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409303 Hu/GII/20478/2010/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409304 Hu/GII/30017/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409305 Hu/GII/30026/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409306 Hu/GII/30040/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409307 Hu/GII/30045/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409309 Hu/GII/30113/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409310 Hu/GII/30129/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409311 Hu/GII/30199/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409312 Hu/GII/30201/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409313 Hu/GII/30206/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409315 Hu/GII/30211/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409316 Hu/GII/30212/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — KC409318 Hu/GII/30266/2009/VNM Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — GU594162 Hu/G11/8610/Saga/ 2008/JPN Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — DQ415279 Hu/GII/Carlow/2002/Ire Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — DQ369797 Hu/Guangzhou/ NVgz01/CHN Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — EU310927 Hu/Houston/TCH186/ 2002/US Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — DQ456824 Hu/MK04/2004/JP Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY741811 Hu/NLV/Dresden174/pUS- Nor11/1997/GE Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY772730 Hu/NLV/GII/ Neustrelitz260/2000/DE Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY587989 Hu/NLV/Oxford/ B2S16/2002/UK Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY587988 Hu/NLV/Oxford/ B4S1/2002/UK Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY587983 Hu/NLV/Oxford/ B452/2002/UK Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY587986 Hu/NLV/Oxford/ B454/2002/UK Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY587984 Hu/NLV/Oxford/ B455/2002/UK Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY587985 Hu/NLV/Oxford/ B456/2002/UK Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY587987 Hu/NLV/Oxford/ B457/2002/UK Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — DQ366347 Hu/OsakaNI/2004/JP Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — EU921344 Hu/Pune/PC15/2006/India — Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — EU921388 Hu/Pune/PC51/2007/India — Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — EU921389 Hu/Pune/PC52/2007/India Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AB365435 Hu/Texas/TCHQ4- 577/2004/US Norovirus genogroup 2 NC_001959 vertebrates,human 2 Caliciviridae,Norovirus,Norwalk virus — AY502020,AY502023 Norovirus genogroup 3 NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — JX145650 Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — EU854589 mouse/Hannover1/2007/D EU Norovirus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — HQ392821 pig/GII/Ch6/China/2009 Norovirus swine/GII/OH- NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY823305 QW 125/03/US North American arenavirus NC_010700 vertebrates,human 3 Arenaviridae,Arenavirus,Whitewater Arroyo seg. S EU123331,EU123330 virus ,EU123329 Norwalk virus NC_001959 vertebrates,human 3 Caliciviridae,Norovirus,Norwalk virus — AF093797,AF504671, M87661 Norwalk-like virus NC_001959 vertebrates,human 17 Caliciviridae,Norovirus,Norwalk virus — AB039780,AB083780 ,AB039782,AB03977 9,AY126474,AB0397 77,AB044366,AB126 320,AB039776,AB08 3781,AB081723,AB0 45603,AB039774,AB 039778,AB084071,A B039781,AB039775 Oliveros virus NC_010248 vertebrates,human 1 Arenaviridae,Arenavirus,Oliveros virus seg. S U34248 Oliveros virus NC_010250 vertebrates,human 1 Arenaviridae,Arenavirus,Oliveros virus seg. L AY216514 Oran virus NC_003466 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. S AF482715 Oran virus NC_003467 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. AF028024 M Orangutan hepadnavirus NC_003977 vertebrates,human 2 Hepadnaviridae,Orthohepadnavirus,Hepatitis — AF193863,AF193864 B virus Parainfluenza virus 5 NC_006430 vertebrates,human 13 Paramyxoviridae,Rubulavirus,Parainfluenza — JQ743322,JQ743319, virus 5 JQ743321,KC852177 ,JQ743327,JQ743328 ,JQ743318,JQ743325 ,JQ743324,JQ743323 ,AF052755,JQ743326 ,JQ743320 Parana virus NC_010756 vertebrates,human 2 Arenaviridae,Arenavirus,Parana virus seg. S AF485261,AF512829 Parana virus NC_010761 vertebrates,human 1 Arenaviridae,Arenavirus,Parana virus seg. L EU627613 Pergamino virus NC_003466 vertebrates,human 1 Bunyaviridae,Hantavirus,Andes virus seg. S AF482717 Peste-des-petits-ruminants NC_006383 vertebrates,human 11 Paramyxoviridae,Morbillivirus,Peste-des- — HQ197753,JX217850 virus petits-ruminants virus ,AJ849636,KF727981 ,AY560591,EU26727 4,KC594074,X74443, EU267273,FJ905304, JF939201 Pichinde virus NC_006439 vertebrates,human 3 Arenaviridae,Arenavirus,Pichinde virus seg. L AF427517,EF529745, EF529747 Pichinde virus NC_006447 vertebrates,human 10 Arenaviridae,Arenavirus,Pichinde virus seg. S U77602,EF529746,M 16734,EF529744,AF0 81552,K02734,AF081 553,AF081554,AF081 555,M16735 Pigeon paramyxovirus 1 NC_002617 vertebrates,human 18 Paramyxoviridae,Avulavirus,Newcastle — GQ429292,JX486557 disease virus ,JX901121,JX901120, JX486555,JX486556, FJ410145,JX901119, JX486551,FJ410147, JX901110,JX486552, JX486554,JX901123, JX486553,JX901122, JX486550,JX901109 Pigeon paramyxovirus-1 NC_002617 vertebrates,human 1 Paramyxoviridae,Avulavirus,Newcastle — AJ880277 disease virus Pirital virus NC_005894 vertebrates,human 9 Arenaviridae,Arenavirus,Pirital virus seg. S AF485262,AY574571, AF277659,AY573923, AY574572,EU542420 ,AY574573,AY57392 1,AY575850 Pirital virus NC_005897 vertebrates,human 2 Arenaviridae,Arenavirus,Pirital virus seg. L AY216505,AY494081 Pneumonia virus of mice NC_006579 vertebrates,human 1 Paramyxoviridae,Pneumovirus,Murine — AY743910 15 pneumonia virus Pneumonia virus of mice NC_006579 vertebrates,human 1 Paramyxoviridae,Pneumovirus,Murine — AY743909 J3666 pneumonia virus Porcine enteric sapovirus NC_000940 vertebrates,human 3 Caliciviridae,Sapovirus,Sapporo virus — AF182760,AB221130, ,NC_01062 AY425671 4,NC_0062 69,NC_006 554 Porcine rotavirus NC_007543 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus C seg. 6 EU169871,EU169870 ,EU169869 Porcine rotavirus NC_007544 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 7 X60546 Porcine rotavirus NC_007545 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus C seg. 9 EU169873,EU169872 Porcine rotavirus NC_007569 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus C seg. EU169874,DQ003298 10,DQ003299 Porcine rotavirus NC_007570 vertebrates,human 10 Reoviridae,Rotavirus,Rotavirus C seg. 5 L29184,DQ534018,FJ 494692,M29287,FJ49 4691,DQ003294,AB5 76626,FJ494690,DQO 03295,L29186 Porcine rotavirus NC_007571 vertebrates,human 101 Reoviridae,Rotavirus,Rotavirus C seg. 8 EF474079,FJ807879, FJ807796,DQ003292, FJ807870,DQ534015, FJ807815,FJ807854, FJ807868,FJ807873, FJ807840,FJ807874, FJ807844,FJ807793, FJ807823,FJ807817, FJ807792,FJ807819, FJ807803,FJ807797, FJ807871,FJ807788, FJ807790,FJ807836, FJ807820,FJ807843, FJ807829,FJ807863, FJ807798,FJ807837, FJ807839,FJ807825, FJ807794,FJ807853, FJ807808,FJ807842, FJ807869,FJ807838, FJ807809,FJ807867, FJ807795,FJ807816, FJ807806,FJ807822, FJ807801,FJ807855, FJ807833,AF192267, FJ807835,FJ807802, FJ807818,FJ807847, FJ807789,FJ807810, FJ807828,FJ807862, FJ807832,FJ807851, FJ807866,FJ807813, FJ807831,FJ807848, FJ807845,DQ003293, FJ807877,FJ807852, FJ807858,FJ807826, FJ807859,FJ807811, FJ807799,AY766085, FJ807849,FJ807807, FJ807830,FJ807878, FJ807846,FJ807791, FJ807861,FJ807821, FJ807857,FJ807800, FJ807865,FJ807856, FJ807805,FJ807812, FJ807860,EU445113, FJ807804,FJ807824, FJ807841,FJ807864, FJ807876,FJ807875, FJ807850,FJ807827, FJ807834,FJ807814, L10361,FJ807872, L1 0360 Porcine rotavirus NC_007572 vertebrates,human 8 Reoviridae,Rotavirus,Rotavirus C seg. 3 L10358,DQ003290,Li 0359,DQ536362,DQ7 86578,DQ003291,DQ 534016,AB576625 Porcine rotavirus NC_007573 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus C seg. DQ003296,DQ0474,D 11 0003297,AB576628, DQ534017,DQ82341 6 Porcine rotavirus A NC_011501 vertebrates,human 7 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF796709,JF796698, AB779644,AB779643 ,JF796720,AB779642 ,AB779645 Porcine rotavirus A NC_011502 vertebrates,human 9 Reoviridae,Rotavirus,Rotavirus A seg. 8 AB779639,AB779641 ,JF796719,JF796697, AB779638,JF796708, JF781165,AB779640, JF796730 Porcine rotavirus A NC_011503 vertebrates,human 26 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB176680,AB779619 ,DQ515961,JF796728 ,DQ204743,AY70778 8,AB573873,DQ7865 77,AB176677,AY707 787,DQ786576,JF781 163,AB176678,DQ25 6502,AB573875,JF79 6739,AB573879,AB5 73877,AB176681,AB 176683,JF796706,KC 292205,DQ256503,JF 796717,AB605258,A B176679 Porcine rotavirus A NC_011504 vertebrates,human 11 Reoviridae,Rotavirus,Rotavirus A seg. JF796699,JF796721, 10 D88831,JF781167,JF 796710,JF796732,JN 650610,FJ492833,DQ 204740,FJ492834,JN 650611 Porcine rotavirus A NC_011505 vertebrates,human 13 Reoviridae,Rotavirus,Rotavirus A seg. KC117150,DQ204739 11 ,JF796733,JF781168, JF796722,KC117151, KC117152,JF796700, KC117147,KC117149 ,DQ916134,KC11714 8,JF796711 Porcine rotavirus A NC_011506 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 2 AB779627,JF781159, AB779628,AB779629 ,AB779626 Porcine rotavirus A NC_011507 vertebrates,human 9 Reoviridae,Rotavirus,Rotavirus A seg. 1 AB779622,JF796712, JF796701,AB779625, JF781158,JF796723, AB779624,JF796734, AB779623 Porcine rotavirus A NC_011508 vertebrates,human 11 Reoviridae,Rotavirus,Rotavirus A seg. 3 AB779632,JF781160, AB779631,JF796714, AB779630,AY300922 ,AB779633,AY27792 1,JF796703,JF79672 5,JF796736 Porcine rotavirus A NC_011509 vertebrates,human 59 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU372751,EU372791 ,EU372765,EU37275 3,EU372789,AB7796 21,EU372776,EU372 793,EU372764,EU37 2795,EU372797,EU3 72783,EU372774,JF7 96705,EU372787,KC 855062,EU372773,D 0119822,EU372756, JF796716,EU372781, EU372755,EU372772 ,EU372785,JF796727 ,EU372766,EU37276 2,EU372761,EU3727 63,EU372798,EU372 786,EU372767,EU37 2770,KC855061,EU3 72779,EU372799,EU 372768,EU372757,E U372771,EU372796, EU372777,EU372752 ,EU372782,EU37278 0,EU372790,KC8550 60,EU372754,EU372 758,EU372794,EU37 2784,EU372769,EU3 72760,EU372759,EU 372792,AB779620,E U372788,EU372778, Porcine rotavirus A NC_011510 vertebrates,human 10 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF781161,JF796737, AB573878,DQ118979 ,AB573876,JF796726 ,JF796715,AB573874 ,JF796704,FJ492835 Porcine rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF144799 A411/G3P[7] 10 Porcine rotavirus A strain NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 DQ062572 134/04-15 Porcine rotavirus A strain NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 DQ061053 134/04-15 Porcine rotavirus A34 NC_007573 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. AF165219 11 Porcine rotavirus B NC_021542 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 9 AB490417 Porcine rotavirus B NC_021546 vertebrates,human 15 Reoviridae,Rotavirus,Rotavirus B seg. 5 AB646359,AB646363 ,AB646364,AB64635 5,AB646360,AB6463 54,AB646350,AB646 361,AB646353,AB64 6351,AB646352,AB6 46358,AB646357,AB 646356,AB646362 Porcine rotavirus C NC_007543 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 6 M69115 Porcine rotavirus C NC_007546 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 2 M74217 Porcine rotavirus C NC_007547 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 1 M74216 Porcine rotavirus C NC_007570 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus C seg. 5 HQ323754,M94157 Porcine rotavirus C NC_007571 vertebrates,human 14 Reoviridae,Rotavirus,Rotavirus C seg. 8 EF464648,EF464656, EF464654,EF464651, U31749,EF464652,E F464653,EF464655,E F464650,U31748,HQ 323753,EF464649,M 61101,EF464657 Porcine rotavirus C NC_007573 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus C seg. AF093202,AF093203 11 Porcine rotavirus C NC_007574 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 4 M74219 Porcine rotavirus CN86 NC_007570 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 5 U10031 Porcine rotavirus strain NC_007571 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 8 DQ813658 344/04-1 Porcine rotavirus strain NC_007573 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. AF144798 A131 11 Porcine rotavirus strain NC_007573 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. AF144797 A253 11 Porcine rubulavirus NC_009640 vertebrates,human 1 Paramyxoviridae,Rubulavirus,Porcine — BK005918 rubulavirus Porcine torque teno virus 1 NC_014070 vertebrates,human 2 Anelloviridae,lotatorquevirus,Torque teno sus — JX173482,JX173481 virus 1a Puumala virus NC_005223 vertebrates,human 25 Bunyaviridae,Hantavirus,Puumala virus seg. JQ319172,JQ319174, M X61034,JQ319173,U 14136,AF442617,AF4 42614,JQ319175,AF3 67061,AB433850,AF4 42616,L08754,JN831 944,Z49214,M29979, Z84205,AB433852,LO 8755,HE801634,JN83 1948,JN831951,AY52 6218,AF442615,U224 18,AB297666 Puumala virus NC_005224 vertebrates,human 56 Bunyaviridae,Hantavirus,Puumala virus seg. S AJ314597,FN377822, X61035,AF367069,AJ 238788,AF367070,H E801633,U22423,AF 367068,JQ319170,JN 696371,JQ319163,JQ 319164,Z30708,JN83 1943,AB297665,AJ23 8790,JQ319166,Z699 85,JQ319162,Z30705 ,AB433845,AJ314598 ,JQ319168,AJ223371 ,Z30707,Z30706,JQ3 19171,JN831950,Z30 703,AF442613,AJ314 599,JQ319161,AF367 064,JQ319167,AF367 071,JN696376,JN831 947,AF367066,AB433 843,Z84204,Z30702,J 0319169,JN696373, AF367065,AF367067, Z46942,JN696375,AY 526219,JQ319165,FN 377821,JN696372,Z2 1497,Z30704,AJ2387 89,JN696374 Puumala virus NC_005225 vertebrates,human 12 Bunyaviridae,Hantavirus,Puumala virus seg. L JN831945,AB574183, JN831946,M63194,H E801635,AB574184, AY526217,AB297667 ,JN831952,JN831949 ,EF405801,Z66548 Puumala-like virus isolate NC_005224 vertebrates,human 1 Bunyaviridae,Hantavirus,Puumala virus seg. S EF442087 Fusong-Cr-247 Rabbit rotavirus NC_011503 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF528202,AF528201, AF528203,AF528204 Rabbit rotavirus NC_011504 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. AF533536,AF533534, 10 AF533537,AF533535 Rabbit rotavirus NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JQ4361 11 Rabbit rotavirus strain NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF144792 Alabama 10 Rabbitpox virus NC_006998 vertebrates,human 1 Poxviridae,Orthopoxvirus,Vaccinia virus — AY484669 Rabies virus NC_001542 vertebrates,human 204 Rhabdoviridae,Lyssavirus,Rabies virus — JQ685916,JQ685948, EU293121,EF437215 ,AF499686,DQ09952 5,EU182347,AB0858 28,JN786878,GU565 703,JQ685966,JX473 839,KC595283,JQ68 5962,GU345746,GU6 47092,EF542830,EF5 64174,AY956319,GU 565704,EU293115,J 0685975,JQ685893, KF155000,EU877068 ,JX473841,JQ685919 ,EF206719,KC17164 5,EF206720,AB04482 4,JQ685964,EF20670 8,KC595281,JQ6859 59,JQ685926,JQ6858 92,JQ685897,JQ6859 05,HQ450386,JQ685 963,JQ944709,JQ685 942,JN609295,JQ685 895,HQ317918,JQ68 5945,KF154997,JQ68 5894,AB569299,FJ57 7895,KC171644,JQ6 85932,FJ712195,AB6 45847,HM535790,JQ 685930,JQ685940,AB 635373,EU293116,D 0099524,KC193267, KC169986,JQ685901 ,FJ913470,FJ959397, JQ685967,FJ712193, JQ685924,JQ685917, JQ685958,JQ685934, GU345747,KC737850 ,JQ685941,HE80267 5,AY705373,JQ68595 4,JQ685909,EF20671 8,EF206714,M31046, JQ685957,JQ685912, JXQ88694,JQ685973, KF154999,JQ685898, JQ685968,JQ685946, JQ685965,EF206713, DQ875051,GU35865 3,KF154998,GQ9181 39,JQ685951,JQ7306 82,JQ685921,EF2067 09,JQ685902,EU877 071,JQ685937,AB519 642,JQ685910,AB128 149,JQ944707,JQ685 952,KC171643,JQ94 4708,EF206707,AB69 9220,JQ685928,AB51 7660,JQ685931,JQ68 5933,JQ685900,EF20 6710,JQ685974,EU3 11738,JQ423952,AB3 62483,JQ685913,JQ6 85977,JQ685903,AB5 17659,JQ685953,JX2 76550,JQ685914,FJ7 12194,JQ685911,JQ6 85906,JQ685915,AB6 08731,JQ685908,JQ6 85922,JQ685947,JQ6 85935,AB519641,HE 802676,JQ685956,E U182346,JQ685976,J 0685950,EF206712,J 0685925,EU643590, FJ866836,EU293113, FJ866835,JQ685939, AB009663,DQ875050 ,KC595280,EF20671 1,EU877070,JQ6859 44,JQ685955,EF2067 16,JQ685929,EU549 783,EF206717,JQ685 961,JQ944704,JQ685 971,KF155002,GU34 5748,KC762941,JQ6 85918,JQ685920,JQ6 85970,JQ685969,JQ6 85936,HQ891318,JQ 685960,JQ685943,JQ 685896,JQ685927,JQ 685938,EF206715,JQ 647510,KF154996,FJ 712196,EU293111,JX 473840,KC595282,J 0685907,JQ946087, KC196743,JX473838, JN786877,JQ685972, JQ685949,JN234411, JQ944705,EU877067 ,JQ944706,JQ685904 ,JQ685899,HQ45038 5,M13215,EU877069, JQ685923,KF155001 Ravn virus-Ravn,Kenya, NC_001608 vertebrates,human 3 Filoviridae,Marburgvirus,Marburg — EU500828,EU500826 1987 marburgvirus ,EU500827 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — FJ393024 Virus SA13/JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JX826592 virus 3a-2a (SA1/JFH1) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852457 virus DBN-JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852455 virus DH1-JFH 1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852456 virus DH5-JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852454 virus DH6-JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343785 virus ED43(5′UTR- ,NC_00982 NS2)/JFH1_T827A,T977S 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343780 virus H77(5′UTR- ,NC_00982 NS2)/JFH1_V787A,Q1247 6,NC_0098 L 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — EU363761 virus H77C/JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343787 virus HK6a(5′UTR- ,NC_00982 NS2)/JFH1_F350S,N417T 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — FJ230883 virus HK6a/JFH-1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343781 virus J4(5′UTR- ,NC_00982 NS2)/JFH1_F886L,01496L 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — FJ230881 virus J4/JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343793 virus J6(5′UTR(1b-E1)- ,NC_00982 NS2)/JFH1 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343792 virus J6(5′UTR(2a-Dom1/11)- ,NC_00982 NS2)/JFH1 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343791 virus J6(5′UTR(Cell- ,NC_00982 ATAD1)-NS2)/JFH1 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343788 virus J6(5′UTR(Cell-U3)- ,NC_00982 NS2)/JFH1 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343789 virus J6(5′UTR(Cell- ,NC_00982 U3WTS1)-NS2)/JFH1 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343790 virus J6(5′UTR(Cell-U6)- ,NC_00982 NS2)/JFH1 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343782 virus J6(5′UTR-NS2)/JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852467 virus J6/JFH1(DH6-NS5A), NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852463 virus J6/JFH1(ED43-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852458 virus J6/JFH1(H77C-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852468 virus J6/JFH1(HCV1- ,NC_00982 NS5A) 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852465 virus J6/JFH1(HK6a-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852469 virus J6/JFH1(J1-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852460 virus J6/JFH1(J4-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852461 virus J6/JFH1(J6-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852466 virus J6/JFH1(0C69- ,NC_00982 NS5A) 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852462 virus J6/JFH1(S52-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852464 virus J6/JFH1(SA13-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852459 virus J6/JFH1(TN-NS5A) ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180456 virus J6/JFH 1-452 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180455 virus J6/JFH 1-H K6a ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180452 virus J6/JFH 1-J6 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180459 virus J6/JFH1-JCH2 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180460 virus J6/JFH1-JCH4 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180457 virus J6/JFH1-K3a,650 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180458 virus J6/JFH1-NZL1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180453 virus J6/JFH 1-S52 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JN180454 virus J6/JFH 1-SA13 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343783 virus J8(5′UTR-NS2)/JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — FJ230882 virus J8/JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — FJ230884 virus 0C69/JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343784 virus S52(5′UTR- ,NC_00982 NS2)/JFH1_1793S, 6,NC_0098 K14040 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — EU204645 virus S52/JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — JF343786 virus SA13(5′UTR- ,NC_00982 NS2)/JFH1_A1022G,K111 6,NC_0098 9R 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant Hepatitis C NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HQ852453 virus TN-JFH1 ,NC_00982 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Recombinant chimeric NC_009827 vertebrates,human 1 Flaviviridae,Hepacivirus,Hepatitis C virus — HM049503 Hepatitis C virus 1b/2a ,NC_00982 432/JFH-1 6,NC_0098 25,NC_009 824,NC_00 4102,NC_0 09823 Respiratory syncytial virus NC_001803 vertebrates,human 24 Paramyxoviridae,Pneumovirus,Respiratory — BD137600,BDQ81927 syncytial virus ,BDQ91237,BDQ8192 8,FJ614813,JN03211 5,BD137598,JN03211 9,U39661,BD137603, BDQ81930,JX503100, BDQ81932,BD137602 ,JX503101,BD137601 ,BD271636,JN032116 ,BDQ81931,BD27163 5,BDQ81929,JN03211 7,BD137599,JN03212 0 Reston ebolavirus NC_004161 vertebrates,human 4 Filoviridae,Ebolavirus,Reston ebolavirus — AF522874,JX477166, AY769362,JX477165 Reston ebolavirus-Reston NC_004161 vertebrates,human 4 Filoviridae,Ebolavirus,Reston ebolavirus — AB050936,FJ621585, FJ621583,FJ621584 Retroperitoneal NC_009333 vertebrates,human 1 Herpesviridae,Rhadinovirus,Human — KF703446 fibromatosis-associated herpesvirus 8 herpesvirus Rhesus rotavirus NC_011500 vertebrates,human 8 Reoviridae,Rotavirus,Rotavirus A seg. 5 AY117051,AY117052 ,AY117049,AY11705 0,U08433,AY117053, HQ665465,AY117048 Rhesus rotavirus NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 AY065842 Rhesus rotavirus NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 HQ665466,M21650,A F295303 Rhesus rotavirus NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HQ665467 11 Rhesus rotavirus NC_011510 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 4 M18736,AY033150 Rhinovirus A NC_001617 vertebrates,human 2 Picornaviridae,Enterovirus,Rhinovirus A — JXQ74050,GQ223229 Rhinovirus B NC_001490 vertebrates,human 1 Picornaviridae,Enterovirus,Rhinovirus B — JX193795 Rinderpest virus NC_006296 vertebrates,human 7 Paramyxoviridae,Morbillivirus,Rinderpest virus — JN234008,GU168576 ,JN234010,AB547190 ,Z30697,JN234009,A B547189 Rinderpest virus (strain NC_006296 vertebrates,human 1 Paramyxoviridae,Morbillivirus,Rinderpest virus — X98291 Kabete 0) Rodent hepacivirus NC_021153 vertebrates,human 1 Flaviviridae,Hepacivirus,Rodent hepacivirus — KC815310 Rotavirus A NC_011500 vertebrates,human 94 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN258352,JN258790, JXQ27770,JN651781, JN258907,JXQ27881, JN651846,JXQ27738, HQ657144,JXQ27782 ,JXQ27866,JXQ27902, JXQ27662,JXQ27760, JN258407,JN635549, JXQ27837,JN651748, JN258810,JN635538, JN258951,JN635527, JXQ27892,JN827248, JXQ27811,JF521476, JXQ27943,JXQ27815, JN651857,JXQ27847, JN258862,JN651813, JXQ27756,HQ657133 ,JN258944,JN651792 ,JN258892,JN258337 ,JN258833,JN872871 ,JN258355,HQ65715 5,JXQ27947,JN25884 5,JXQ27672,JXQ2771 3,JN651879,JXQ2792 4,JN831204,JXQ2772 1,JN258395,JQ68867 7,JXQ27651,GU5650 69,JN831226,JXQ276 95,JN013975,JXQ276 91,JXQ27870,JXQ279 14,FN665692,JN2588 54,GU565047,JXQ27 966,GU827412,JN65 1803,JN651759,JN25 8801,GU565091,GU5 65058,JXQ27832,FN6 65681,JN831215,JXQ 27644,JXQ27726,JN6 51770,JN258377,JN6 51824,JXQ27793,JN6 51835,FJ169857,JN2 58372,JN258821,JN0 13974,JN258878,GU 565080,JN651874,JF 521465,JN258914,JN 258925,DQ838599,J XQ27968,JN651890,J N258887 Rotavirus A NC_011501 vertebrates,human 387 Reoviridae,Rotavirus,Rotavirus A seg. 7 KC443781,KC579550 ,JN258391,KC579943 ,EF990696,KC44292 5,KC443562,KC8346 92,KC580442,FJ7939 79,KC580343,KC580 465,KC443364,KC57 9572,KC443595,KC5 79710,KC443661,KC 580548,JXQ40431,KC 174896,KC580534,K C769324,KC443617, FJ793988,JX406753, KC443342,KC579778 ,KC443683,HQ66113 1,KC579925,JN60545 6,KC443771,KC1752 22,KC580035,KC175 255,EF990692,KC57 9495,EF990710,KCS 79627,KC579991,KC 769302,KC443716,JN 258358,KC580275,K C769445,KC215570, DQ492676,KC443551 ,JN258334,KC175069 ,KC443153,GU82741 4,JN258929,FJ79398 5,KC174940,KC5800 94,JN258840,KC4437 38,JN651750,KC5803 54,KC443529,KC579 957,KC579661,KC44 2971,KC580620,KC8 34691,DQ838610,KC 174874,KC443353,K C443186,JQ688679, KC580024,KC195766 ,KC175244,JX965152 ,KC769357,KC57975 4,KC769335,KC4436 06,KC579528,KC443 463,JN258881,KC580 105,HQ657135,KC17 5123,JF521467,KC57 9767,KC175047,FJ79 3976,DQ146678,KC5 80162,KC442948,KC 215526,KC443584,K C175233,KC579483, KC579594,KC442889 ,KC834690,KC58025 1,KC580586,KC4434 52,KC175134,KC769 467,KC579944,KC58 0575,HQ661120,HQ6 61142,KC174929,KC 443419,JN258905,KC 443015,KC443518,K C769478,HQ846860, FJ793975,KC579605, KC175189,FJ793990, KC174863,KC580128 ,KC579506,KC76940 1,JN258871,DQ4905 34,KC174972,KC175 266,HQ657146,KC44 3208,FN665684,GU1 99518,KC215537,KC 579877,JN651761,G U565059,KC175112,J N651881,KC443441,J N258381,KC579811, KC579660,KC580240 ,KC175003,GU56508 1,KC443230,KC1936 20,KC443650,EF554 155,KC579688,KC44 3386,KC443573,JN25 8947,KC215494,FJ79 3973,KC580523,JN65 1868,JN651826,KC44 3639,JN831217,FJ79 3981,KC443252,JN87 2873,KC443296,KC4 43131,KC215516,KC 580207,FJ793969,KC 443285,KC580420,K C175091,KC579822, KC175025,KC443263 ,KC175156,KC17490 7,KC769390,KC1751 67,KC442878,JN6054 45,KC579472,KC443 727,KC579911,KC58 0398,KC443219,KC5 79924,FJ793992,KC7 69379,KC443375,KC 443026,KC579699,K C193609,JN258369,K C580598,KC580276, EF554144,KC580229 ,KC443540,FJ793974 ,GU565070,KC58015 0,FJ793971,JN65179 4,KC580319,KC5798 36,KC580185,KC174 962,GU565092,JN25 8828,KC580431,JX96 5151,KC442993,JN65 1805,KC580409,HQ6 57157,KC443672,KC 579616,KC580218,K C579539,FJ169859,K C175102,FJ793980,K C579517,KC580365,J N258859,KC579968, KC174918,JN258896, KC579583,KC580013 ,JN635540,KC579852 ,JN258402,HQ84687 1,KC443749,KC5806 09,KC174885,JN8312 06,KC580196,KC580 511,EF990700,KC44 3705,KC443408,KC5 79721,KC443004,JX2 71009,JQ988896,JX2 71006,KC175058,FJ7 93987,KC174993,JN6 05434,KC175036,FJ7 93978,DQ146703,KC 443485,DQ146645,E F990688,JN651837,K C442867,KC769346,J N258781,KC443397, KC580547,KC443197 ,KC579835,JN013979 ,KC580500,JN651859 ,KC140595,KC17501 4,KC769423,GU2964 15,KC443331,KC174 951,FJ793983,KC443 496,KC580173,JN827 250,JN635551,KC443 175,JX965153,KC175 080,FJ793984,KC579 800,KC580071,JN258 938,HQ846882,KC58 0332,JN258848,KC44 3142,FJ793972,JN60 5423,KC580488,KC1 75178,KC580294,KC 442937,KC215474,K C580631,KC579789, FJ793986,JN258806, KC579641,KC769456 ,KC579677,KC76936 8,KC579561,JN63552 9,KC443760,JN01398 0,KC579743,GU1995 00,JN651783,KC5804 64,KC175145,KC443 164,KC769412,KC21 5483,FJ793977,KC17 5211,KC769313,KC5 79732,DQ146689,KC 769434,KC580053,K C442900,KC443694,J N651897,KC580453, KC215548,KC215505 ,KC580387,DQ14665 6,FJ793982,KC57988 8,DQ490558,KC5799 80,DQ490541,KC580 083,EF990704,JF835 114,JN605412,KC443 507,KC195757,JN258 918,KC175277,KC44 3628,FJ793991,JN83 1228,KC442911,FJ79 3970,KC579640,KC5 80476,FJ793989,KC4 42960,KC579865,KC 580318,JN651848,JN 258815,HQ846849,K C580305,FN665695, KC174982,KC443320 ,JN258793,KC580564 ,JN651815,KC580052 ,DQ146696,KC17520 0,KC580376,KC4429 82,GU296414,KC580 002,KC443241,KC58 0262,JN651772,KC44 3274,JN258347,KC58 0117,KC443308,DQ1 46667,KC443430,GU 565048,JF521478,KC 579900,KC193630,K C443474 Rotavirus A NC_011502 vertebrates,human 410 Reoviridae,Rotavirus,Rotavirus A seg. 8 KC579687,KC443528 ,KC175243,KC58060 8,KC579582,JN63555 0,HQ846850,JXQ278 69,KC580353,JXQ404 28,KC442959,KC175 057,KC579482,JXQ27 640,KC579941,DQ14 6690,JN258782,KC57 9720,KC193608,KC1 75155,KC175133,JN6 51793,KC580206,KC 175232,KC175046,K C443284,KC580161,J F521468,KC175090,J N258365,KC195765, GU565082,KC174950 ,DQ490559,KC44297 0,KC443141,KC5800 23,JXQ27665,KC4431 63,DQ490542,KC443 484,JN258945,JN651 858,KC769466,KC58 0463,JN651771,KC58 0574,JN258902,JN65 1836,KC580184,EF5 54145,JX406754,KC5 80138,KC443374,KC 443295,DQ146697,K C443605,JXQ27956,J X683000,HQ846861, KC442888,KC580149 ,HQ657145,JXQ2775 9,KC580487,JN83121 6,JXQ27715,KC17510 1,KC579639,KC4431 85,GU565093,KC215 536,KC175068,GU56 5071,KC443352,KC1 75013,DQ146704,KC 174884,JX965148,KC 443660,KC579777,JN 605455,KC193629,JX 027781,KC443473,JX 027825,KC443341,K C834693,KC769400, KC443273,GU199489 ,KC442936,JN377717 ,KC580522,KCO2003 3,KC579899,KC4437 37,KC443451,KC443 385,JXQ27967,GU19 9517,KC195754,KC1 74971,KC443003,FJ1 69860,KC174906,FN 665694,KC443363,K C174992,JN872872,E F990705,JN635528,K C580342,KC442924, KC175122,KC175276 ,KC579659,GU19949 9,DQ146646,EF9906 89,KC442992,JX6829 98,KC442866,KC580 239,KC579788,KC58 0375,GU296413,KC5 79676,JN651891,KC5 79864,JXQ27836,JN2 58860,JN651782,KC4 43014,DQ492677,KC 020021,KC579942,K C443726,KC140594,J N651875,JXQ27923,K C443262,JXQ27846,J N258873,KC443407, KC175166,KC769334 ,KC580585,DQ14667 9,KC579887,JXQ2774 8,EF990693,KC4434 29,KC579922,KC175 079,JXQ27891,HQ66 1119,KC580012,KC4 43440,JN258387,JN2 58816,KC175177,JN6 51880,KC580316,JX2 71008,KC579799,JXQ 27698,KC579876,JXQ 27737,JXQ27814,KC5 80475,KC580317,KC 443693,JX965150,JN 605422,KC579834,K C579990,JN377719,J N258802,KC579604,J F521479,HQ846883, KC443152,DQ146668 ,JN377721,KCO20031 ,KC443561,KC76935 6,JN013977,KC58036 4,JN651847,KC44289 9,JF712584,KC57974 2,KC580273,KC5800 51,KC579753,JN2583 98,JN258824,KC5804 30,JN831205,KC4433 96,KC174939,KC443 748,KC443229,KC44 3025,KC580001,KC4 43196,JN258924,KC4 43462,KC579979,KC 443759,KC579731,JN 651749,KC443306,K C579810,KC174862, KC175265,GU565060 ,KC443780,JQ98889 5,KC579494,JXQ2788 0,JXQ27946,KC58007 0,KC769323,JN25834 3,KC579910,KCO200 20,KC443616,KC443 638,KC580250,GU29 6412,KC580082,KC7 69345,JXQ27687,JXQ 27671,KC443506,JN8 27252,KC175002,JXQ 27703,KC579821,KC 442947,KC443251,K C174961,KC579833, GU199510,KC769433 ,KC442877,EF13666 0,KC579549,JN37771 8,JXQ27858,KC83469 4,JN651814,KC57985 1,EF990711,KC4436 82,KC443517,JX9651 49,KC579560,KC579 967,KC580116,JN258 836,KC769422,EF55 4156,HQ657156,JXQ 27792,KC579626,JXQ 40429,GU565049,KC 579709,JX682999,JN 258913,JN258354,KC 769455,KC580533,K C174895,KC769411, KC579956,JN651760, JN258794,KC174917, KC175111,KC834695 ,KC580093,KC44341 8,KC580408,KC7694 44,KC175024,KC769 378,KC443671,JN258 849,KC579863,KC44 3330,JN258882,KC58 0386,KC580050,KCO 20022,KC580034,KC 769301,HQ661130,K C443715,JN651804,E F990697,KC174873,J N651825,GU827413, JN605433,KC769389, KC579471,KC175221 ,JN258935,KC193619 ,KC174981,KC57950 5,KC580172,JQ6886 80,JN258376,JN8312 27,JXQ27913,JN3777 20,KC580195,KC443 649,KC580499,KC57 9538,KC580510,KC1 75035,KC443572,KC 443704,JN635539,KC 443240,KC579766,K C443130,HQ846872, KC175210,KC580261 ,KC579593,KC44377 0,KC175199,HQ6571 34,JF712573,JN0139 78,JN258891,KC4434 95,JXQ27769,KC4432 07,KC579923,KC579 571,HQ661141,JN60 5444,KC580274,JXQ2 7725,KCO20028,DQ8 38615,KC580452,KC 580127,KC442981,JN 013976,KC579527,K C443627,KC580217, KCO20032,KC580597 ,KC174928,KC17525 4,KC442910,KC7694 77,KC443174,JX6829 97,JN258332,KC5801 04,KC580630,KC580 441,KC443594,KC17 5188,KC443307,KC5 79615,KC580228,DQ 490535,DQ146657,K C443583,EF990701, KC443539,JXQ27803, JF712562,KC580545, KC443319,KC579698 ,KC443218,JXQ27934 ,KC579516,KCO2002 7,KC580304,KC5806 19,KC580546,KC580 293,KC175144,KC76 9367,KC580563,KC7 69312,FN665683,KC 580419,JXQ27654,KC 580397,KC215493,JN 605411,JXQ27901,KC 443550,KC579638 Rotavirus A NC_011503 vertebrates,human 429 Reoviridae,Rotavirus,Rotavirus A seg. 9 KC442875,JX841120, JN651889,AB081787, KC580102,GU565068 ,KC579977,KC58063 9,EF079066,KC8346 37,KC580313,KC443 249,KC579696,KC76 9332,JN258874,KC17 5230,KC580473,KC1 75241,KC175000,KC 580595,JN651845,JX 965176,AB081793,A Y773003,HQ846862, KC579613,AB526247 ,KC175033,AB08179 4,KC834638,KC1751 09,GU296431,KC580 237,U26386,AB08179 5,KC580226,KC5795 91,JN258941,KC4436 14,JX965166,JN2589 17,KC579547,JN6518 02,AB081777,U26395 ,KC443172,KC44363 6,KC443361,KC4434 16,KC174871,AB081 790,AB081798,AB08 1792,KC769321,KC4 43394,AB081780,KC 443304,KC580362,JN 258401,EF079069,AB 571046,KC580080,A B081801,KC443227, HQ846884,DQ47858 2,KC443647,KC4436 03,KC580204,FJ1698 61,KC579808,KC443 150,HE646643,JX965 177,KC174926,JN258 844,KC443449,JN831 236,U26388,KC5797 64,AB526249,JN0139 98,KC443161,KC580 170,AB081776,KC44 3724,AB081774,KC5 80561,JN258805,KC1 75208,U26387,KC83 4641,KC443702,HQ6 61117,JN635559,KC5 79751,KC174948,KC 443194,KC580091,K C834635,JN258846, HQ846873,KC580450 ,JF712571,KC769398 ,KC443789,KC58025 9,KC769475,JN82725 3,AB081785,KC1957 63,JN258338,JN6517 58,KC175285,KC443 293,KC443757,KC44 2886,DQ492674,JX9 65164,KC580182,KC 580485,AB081593,G U565079,KC442968, KC579685,KC443471 ,KC443548,JN605453 ,JX965174,KC174990 ,JN014001,JN258390 ,KC175022,KC44320 5,KC175044,KC5800 32,KC443328,JN2587 91,KC579707,KC174 915,KC442934,AB57 3651,KC175077,U26 389,JX965167,AB081 775,KC580136,KC58 0519,KC443183,JQ9 88904,U26382,KC58 0125,JX965180,JX96 5173,KC580340,KC7 69343,KC579849,AB 081779,KC443023,K C769365,KC580351, KC174882,JXQ40425, KC175263,KC769354 ,KC579480,JX841124 ,KC579635,KC44342 7,KC175274,KC4429 8,KC769453,EF121 951,AB621363,KC44 3504,KC443680,JX96 5175,JQ688681,KC5 80531,KC175153,JXQ 40424,KC579503,KC 443592,KC175131,K C580572,EF079065, KC175197,AB081799 ,JN831225,AB081782 ,JN258362,KC579558 ,KC580606,KC17489 3,U26390,KC579965, KC174904,FN665696 ,AB573647,JX841123 ,HQ661139,KC57979 7,JX965160,DQ3214 97,JN651873,KC4435 70,JN605442,JN6054 9,KC443405,U2639 2,JN651780,KC57998 8,DQ321493,GU2964 30,KC443438,JN2588 27,KC443669,JX9651 79,KC579897,JN6355 48,JF521469,JX9651 71,JN258908,AB0817 81,JN651769,AB0817 89,DQ490550,U2638 0,U26393,GU199497, JN872870,KC443034, KC579718,KC579939 ,KC579536,EF07906 8,KC442957,KC1749 37,KC443625,KC215 545,KC442990,JN258 368,KC443515,FN66 5685,AB081797,KC5 80248,KC175088,KC 175142,KC443383,JN 013999,KC443526,K C580079,KC579624, KC443282,KC580147 ,KC174979,JN258813 ,JX965170,KC443372 ,KC579514,KC44376 8,KC579580,KC5798 85,AB081786,KC443 735,KC769387,KC58 0215,KC443746,KC5 80021,AB081594,GU 565090,KC580302,JN 258895,KC579860,G U565057,KC443779,J N635537,KC579999,J N258380,JX841122,K C580068,JN014000,K C443012,DQ478583, KC443658,KC175252 ,KC769486,HQ65714 3,KC580159,KC5800 10,KC443460,KC442 919,AB081784,DQ32 1495,U26383,KC443 260,KC443581,JX965 181,KC443713,KC57 9729,KC579674,JX96 5169,KC443139,AB0 81791,KC443238,AB 573649,JF835112,KC 443271,KC580583,K C580291,AB081796, U26381,KC580114,K C215502,JN651856, U36242,JN605420,K C579908,U36241,JN 258928,KC579830,K C579919,KC443339, KC769442,KC215513 ,L14072,JX965178,K C443216,KC580628,J X406755,JN651896,K C580497,KC579491,J F712582,KC579786, KC769464,JN651834, KC443691,KC579525 ,KC580373,AB08178 3,AB081800,KC5806 17,KC175055,KC442 897,KC443035,KC76 9310,KC580428,HQ6 57154,GU565046,KC 443350,DQ478584,K C579656,EF079067, KC579819,KC580406 ,KC195774,KC44294 5,KC174959,HQ6571 65,KC442979,JX8411 19,KC579874,KC175 186,KC174969,KC58 0542,JX841121,KC76 9409,KC175164,JX96 5182,U26384,U26394 ,GU199508,AB08178 8,KC175219,JN25834 6,KC580193,KC5797 75,KC443317,KC579 492,U26379,JN37770 9,KC580384,KC7693 76,KC579569,KC580 395,DQ490556,DQ83 8620,HQ661128,KC5 79602,JN831214,AB5 73645,KC769431,JN2 58953,HE646646,KC 140587,KC580417,JN 258786,KC580047,JN 651791,JF521480,KC 443537,EF990708,K C769420,KC580439, KC580461,JN605431, KC443001,KC580270 ,EF079064,KC57974 0,KC580520,JF71256 0,KC443493,HQ8468 51,JN258857,KC5803 29,KC175099,KC443 559,JN651823,JN651 867,KC579954,KC83 4646,KC580508,AB0 81778,JN258879,KC4 43482,GU827411,U2 6385 Rotavirus A NC_011504 vertebrates,human 399 Reoviridae,Rotavirus,Rotavirus A seg. JN605446,KC689359, 10 JN377716,KC443309, JXQ27849,KC580014, EF990712,JN831229, DQ270114,GU19950 1,GU565072,KC5797 68,JN258894,KC5803 06,KC580095,KC579 722,KC175223,KC57 9853,JN258367,KC58 0477,JN258345,KC58 0621,JXQ29832,HQ8 46885,JXQ27817,KC4 43629,KC580524,DQ 490543,KC443497,D 0146658,JN258804, KC174897,KC443332 ,JN258400,KC579867 ,KC580025,KC17527 8,JXQ29831,KC44365 1,KC443354,KC1750 15,KC579912,KC443 607,KC443242,KC17 5037,KC580003,JN25 8339,KC579484,KC5 79473,KC443027,JN0 13982,KC580037,KC 443453,KC579606,K C580174,GU199490, KC174952,KC443508 ,KC193621,KC44287 9,KC443431,JN25892 7,JXQ27904,KC58032 1,KC443563,HQ8468 63,JN635541,KC5803 44,KC579866,DQ492 678,JF521481,KC443 782,JXQ27689,JXQ27 827,KC769457,JN013 984,JXQ27705,KC580 054,KC580535,KC17 5092,KC580466,KC7 69336,KC579678,DQ 146680,JN605457,KC 580599,KC579662,J 0688682,KC443739, DQ270104,KC580333 ,JN605413,KC580295 ,JN258838,KC579790 ,KC175146,JXQ27949 ,KC769314,JXQ29834 ,AF093199,JN258389 ,KC579507,KC17499 4,JN635552,KC44359 6,KC443154,KC1936 31,KC579733,KC769 347,KC175267,KC57 9969,KC443695,GU5 65050,KC443376,KC 175168,KC580355,K C175081,KC195767, KC443409,KC579992 ,KC174930,KC44290 1,KC579889,KC4437 28,GU827415,KC442 912,JN651860,KC443 398,HQ657147,KC57 9981,KC442983,KC5 79755,KC175113,KC 579901,DQ270108,K C442961,KC769468, KC443750,KC443321 ,KC443297,JXQ29835 ,DQ838625,KC58054 9,KC442949,KC4430 16,KC580197,KC175 004,HQ661132,KC76 9435,DQ270103,KC1 75026,KC443253,KC 580277,KC579643,G U565061,KC443618, KC443275,KC580208 ,KC580084,JXQ27860 ,JXQ27728,JN258870 ,KC443662,KC17494 1,JXQ27643,JN65177 3,JN651838,JN87287 4,JN651892,JX40675 6,JXQ27700,KC58025 2,JXQ27970,KC68935 8,JN258885,KC76944 6,KC580410,KC5804 43,KC443143,KC442 926,JXQ27883,JF712 586,KC443264,KC68 9361,JXQ27740,JXQ2 7772,JXQ27762,KC58 0278,KC579711,EF5 54146,KC215538,KC 579779,KC579812,K C175212,KC579595, KC174973,KC579642 ,JQ988897,KC76935 8,KC442994,JF52147 0,KC443343,KC5795 29,KC580377,KC769 402,KC443552,JN651 816,HQ661143,KC76 9413,JXQ27958,KC58 0399,EU483088,KC5 79496,KC579837,KC 580512,KC579958,JX 027750,DQ492665,K C580320,KC580241, KC580118,KC580388 ,KC442890,KC57966 3,JN651849,KC17520 1,JN651806,KC17490 8,KC443706,DQ2701 01,FJ169862,JN6517 62,JN651784,DQ146 669,KC443187,JN651 751,KC443640,KC14 0596,KC580501,KC5 80421,JN258852,KC5 80565,JN605435,KC4 43574,FN665697,KC 579838,JXQ27674,JX 965155,KC580576,K C195756,DQ490560, HQ657136,KC175157 ,JF712575,KC769391 ,JXQ27839,JN827254 ,KC579617,KC58058 7,KC769380,KC1751 79,JN635530,HQ661 121,JXQ29836,KC443 365,KC579927,KC57 9801,KC580230,KC5 79573,KC443541,JN2 58357,FN665686,DQ 270102,JXQ27894,D 0270117,KC443486, KC443220,KC175190 ,KC175234,KC44344 2,JN651795,KC17486 4,JN013981,KC57974 4,KC580366,JN25882 0,JX271010,JN25837 9,KC175070,JXQ2766 7,JXQ27936,JN25891 6,JN258867,JXQ2765 6,KC443585,JXQ2779 5,KC579518,KC1749 19,KC769303,KC579 823,JX965156,KC443 761,KC580151,KC58 0454,JN258904,JN60 5424,GU565094,JN2 58826,KC175059,KC 443005,KC442972,K C175245,KC580432, KC579926,KC580055 ,EF554157,KC17487 5,KC443198,KC4434 64,KC174983,JXQ277 84,JXQ27872,JXQ278 05,KC443475,KC769 424,KC580550,KC58 0036,KC193610,KC4 43519,KC580632,KC 579551,KC689360,K C175135,KC580072, KC443231,KC443530 ,JXQ29833,KC769369 ,KC175048,KC58016 3,KC579584,KC4431 76,JN258785,JN6518 69,KC580140,KC175 124,HQ657158,KC58 0107,GU565083,KC5 79700,KC580489,KC 769479,KC579628,A F093200,KC443209,J N831207,JX965154,K C579945,JN831218,K C580186,KC442938, KC443286,KC443165 ,JXQ27717,KC174963 ,KC175103,JN258952 ,DQ146691,GU19951 2,KC580263,KC5806 10,KC442868,KC443 684,KC580219,KC44 3132,KC443420,JXQ2 7916,JN651827,JXQ2 7926,HQ846874,KC1 75256,KC580129,JN6 51882,JN258937,KC4 43717,DQ146647,KC 579689,DQ492655,K C443772,KC580106, KC174886,HQ846852 ,KC579540,JN013983 ,KC579562,KC57987 8,JN258797,KC44367 3,KC443387 Rotavirus A NC_011505 vertebrates,human 374 Reoviridae,Rotavirus,Rotavirus A seg. KC579679,KC443674 11 ,KC195768,DQ83863 0,JN831219,KC19363 2,KC580490,KC7693 37,KC443783,JN6054 58,KC580334,FJ7940 20,KC580400,KC769 326,KC140597,KC57 9959,KC580096,JN25 8850,KC580323,KC5 79618,KC442880,KC 579530,KC443487,K C769381,KC443188, KC443355,KC769348 ,DQ492679,KC44291 3,KC175224,JX27101 1,KC443310,KC5800 73,JXQ27948,KC5802 80,JXQ27826,KC5803 67,KC580085,KC443 166,KC442995,KC44 3641,KC443155,JN65 1828,JXQ27668,KC44 3421,JX406757,KC57 9508,KC443586,KC5 80322,KC443465,KC 579868,KC195755,JN 605425,KC174876,K C579813,KC175268, DQ146648,JN258333 ,KC580187,KC58035 6,KC443696,KC4435 97,KC443254,KC579 723,JN651774,KC174 887,KC580455,KC57 9552,JF521482,JN25 8803,FJ794021,KC57 9701,JN258926,KC44 3006,KC442984,FJ79 4025,KC579645,KC4 43575,KC443432,DQ 146670,JXQ27848,JN 605414,KC580038,JN 258936,JN258388,KC 443564,EF990694,K C580264,JN258837,E F554147,KC443399, HQ657137,KC579802 ,KC580220,FJ794017 ,KC580209,KC44376 2,JN258883,KC44333 3,KC579474,KC1750 82,KC579585,KC443 663,HQ657159,KC58 0015,HQ661133,JF71 2587,HQ846864,KC5 79824,KC579946,FJ7 94033,DQ490544,KC 443542,FJ794039,KC 580108,JN827255,KC 579690,JN258869,KC 769315,KC443210,G U565073,JXQ27739, GU827416,JN651817 ,KC442869,KC58050 2,HQ661144,KC4432 87,KC579563,KC769 447,FJ169863,JN872 875,GU565084,KC58 0536,KC443553,KC5 80307,KC579607,JN8 31230,JN651861,KC5 80152,FJ794018,JN8 31208,KC580566,JXQ 27657,KC580345,JXQ 27704,JXQ27771,KC5 79791,EF990702,FJ7 94016,JN258344,KC5 80551,KC443454,JN2 58946,JN258893,FJ7 94019,JXQ27727,KC5 80026,JXQ27761,KC5 79879,KC579596,JF7 12576,FJ794034,KC4 43017,KC580525,KC 443729,KC580198,K C579485,JXQ27816,J N013986,KC769370, KC580600,JXQ27642, KC769425,JXQ27673, GU565095,HQ84685 3,JXQ27804,JF52147 1,JN635542,JN65176 3,KC443133,JN25837 8,KC579734,JXQ2785 9,KC580231,JN60543 6,KC769403,KC4435 09,FJ794027,JXQ278 71,DQ146698,KC579 541,KC442973,KC57 9756,KC443276,KC4 42939,KC580389,KC 580478,KC443344,K C580175,KC443740,J XQ27783,KC769392,J XQ27903,JN651752,J N013985,JXQ27701,J XQ27749,JXQ27969,G U565051,KC443144, KC580253,FJ794022, KC193622,KC579891 ,DQ146681,DQ14670 6,JXQ27690,JN65183 9,KC580119,GU1995 13,KC579970,KC443 718,JXQ27882,KC580 378,JQ988898,FJ794 026,KC579712,KC17 5235,KC769480,KC5 79902,KC443443,FJ7 94036,JN651796,FJ7 94031,KC579928,HQ 661122,KC579745,K C580577,FJ794024,G U199502,KC769414, KC579664,JN258356, JXQ27716,JXQ08870, JXQ27893,FJ794032, KC443685,KC443322 ,KC580422,KC76946 9,GU296418,KC5804 33,KC580279,KC443 298,KC769304,KC44 2928,HQ846875,JN6 35553,KC580164,KC 443652,KC580004,K C579574,JN258818,K C580411,JXQ27915,K C443476,KC443608, KC769458,FJ794035, KC579839,KC579497 ,DQ146659,JN25836 6,EF990698,KC5806 11,KC443751,KC580 039,KC579913,KC44 3232,JXQ27838,KC44 3773,JXQ27925,JN25 8399,KC769359,KC5 80513,EF554158,GU 296419,KC443377,K C174984,KC443366,J X682996,KC443265, KC443520,KC579993 ,DQ490561,KC44322 1,KC769436,KC5797 80,KC442927,JN6054 47,FJ794037,KC4429 50,KC580467,FN665 687,HQ846886,FJ794 029,JN258825,HQ65 7148,FJ794038,JN65 1870,KC580056,KC5 80588,GU565062,KC 580633,KC443177,JN 258915,KC175213,JN 651883,KC580444,K C579929,JN258796,K C579769,KC579854,J F712565,KC443630,F J794028,KC579519,K C442902,JXQ27935,K C443388,KC579982, KC442891,KC193611 ,JN651807,JQ688683 ,KC443410,KC44370 7,JN258903,FN66569 8,KC443199,KC5800 57,JN651893,KC5796 29,KC443531,FJ7940 23,EF990690,JXQ277 94,KC442962,JXQ279 57,JN258864,KC5798 90,JN258784,JXQ404 34,KC443498,KC443 619,KC580141,JN651 850,KC580622,EF99 0713,JN635531,KC57 9644,KC580242,KC5 80296,GU199491,KC 174865,KC580130,K C175125,KC443243,J N651785,KC443028, FJ794030 Rotavirus A NC_011506 vertebrates,human 388 Reoviridae,Rotavirus,Rotavirus A seg. 2 KC443168,KC175062 ,JXQ27660,KC443289 ,KC442893,KC58044 6,KC443643,KC4437 53,KC580121,HQ846 844,KC580347,JN605 438,JN258406,JN831 221,KC580568,KC83 4709,JXQ27680,JN60 5416,KC579648,KC5 79487,KC580028,KC 769372,KC579598,K C580527,KC580061, KC443665,JN013989, KC580255,KC443632 ,KC579782,KC57999 5,KC579842,KC5795 43,EF560616,KC443 500,KC769317,KC21 5563,KC175259,KC4 43698,KC443179,KC 193634,JN258900,KC 175116,KC580017,G U296423,KC580006, KC443434,KC175051 ,JF712567,JN651754, KC443357,KC443731 ,KC579692,KC17522 6,KC579666,GU5650 42,KC580538,DQ838 634,KC579932,JN258 385,KC579620,JXQ27 788,DQ492670,KC57 9949,DQ146661,KC1 74996,KC175193,KC 580060,JXQ27647,KC 443742,KC834708,JN 651819,KC769394,K C443157,JXQ27777,K C443522,KC769416, KC443456,KC769306 ,JN651898,KC443445 ,KC175171,JXQ27745 ,DQ146639,JF521462 ,KC579499,KC58015 4,KC443764,KC4429 52,KC442882,JN2589 49,KC580624,KC579 631,HQ846877,DQ14 6700,KC579725,JN25 8350,KC579565,KC5 79649,JXQ27682,JX2 71002,JXQ27909,JX9 65138,KC174975,KC 579681,KC442941,K C579736,KC580075,J N258831,KC579826,J XQ27855,JN651809,K C580613,JN651877,J N258911,KC442975,J XQ27658,JN258374,K C175248,KC579961, KC769471,KC580166 ,KC769405,KC44354 4,JQ988900,KC1750 95,KC580380,KC579 576,KC443533,DQ87 0486,JX406748,HQ6 61113,KC443346,KC 769427,KC175160,K C769482,JXQ27801,J XQ27693,KC140591, KC443223,KC580391 ,KC769350,KC58018 9,KC175182,FN6656 89,KC442930,KC442 964,KC579804,KC44 3008,KC443146,KC5 80244,KC580110,DQ 490536,EF554149,K C580635,KC580480,J 0688674,EF560622, GU565053,KC442997 ,KC580283,KC17508 4,KC834710,KC5800 41,KC443676,JXQ277 12,KC443019,KC443 212,JXQ27977,JXQ27 863,JXQ27823,KC580 554,KC580435,KC57 9771,KC174933,JN65 1841,DQ870498,JXQ 27878,KC443478,KC 443785,KC579904,K C769460,HQ846855, KC175237,KC579984 ,KC580266,JN831232 ,KC195770,KC44336 8,KC580309,KC5796 67,JN651863,JN6517 76,KC580298,KC443 390,JN258921,KC580 504,KC579476,JN605 405,GU827407,JXQ2 7889,JN872866,EF55 4138,KC195761,KC4 43379,KC443775,KC 443312,EF560619,K C769383,DQ146672, JN258800,KC443335, KC580284,KC193624 ,JXQ27735,JN651765 ,HQ657150,KC17521 5,KC443610,KC1752 81,KC580492,DQ146 683,JN651787,KC443 234,DQ146650,JN63 5533,JX965137,KC58 0336,KC174922,KC4 43300,KC443030,KC 769339,HQ657161,K C579609,KC443201, KC580469,KC175018 ,KC175073,KC58042 4,JN258396,JXQ2783 4,GU199519,KC1752 04,KC443588,KC579 554,JN258943,KC580 098,KC580325,GU19 9515,KC443467,KC4 43566,KC442986,KC 443412,KC175007,K C580178,KC579793, KC579714,KC580602 ,KC769361,KC58008 7,KC579587,KC5798 93,DQ490546,JN258 865,JXQ27810,KC443 687,JN258789,KC175 270,JXQ27754,KC443 324,DQ870494,KC17 4889,KC174965,KC5 80042,KC443511,KC 174944,KC580402,K C580413,JXQ27724, GU565075,KC579747 ,JN651798,JXQ27768 ,KC580591,KC44327 8,KC174986,DQ4905 52,KC174911,JN2588 77,KC580369,KC579 841,KC579703,KC44 2904,KC175040,DQ8 38633,KC442915,KC 769449,HQ846866,D 0838631,JN258823, DQ870506,KC174900 ,GU199504,JXQ2793 1,KC193613,KC4436 54,DQ870490,KC442 871,JN651852,KC175 029,JXQ27921,KC580 200,JN827245,KC579 521,KC579532,JN635 544,JX965136,JN651 830,KC443720,JN605 449,KC443555,JN258 843,KC443245,KC58 0457,KC443709,FN6 65678,KC174867,KC 175127,JN635555,JX 027955,KC580132,JN 258889,JF521473,KC 769328,KC443621,JF 712556,KC443401,G U565086,KC175105,J N605427,KC174955, KC579856,GU199493 ,JN258932,KC443489 ,KC443577,KC57981 5,KC579915,KC4431 90,JN013990,DQ870 502,JN258363,KC579 510,KC443267,DQ83 8632,JN258812,KC57 9972,GU565064,DQ1 46694,DQ838635,KC 580358,FJ169854,KC 579933,KC443423,K C769438,KC580233, KC175149,HQ657139 ,JN258341,JN831210 ,KC443256,KC58057 9,JF712578,JN25885 1,KC580222,KC5802 11,JXQ27900,JXQ279 64,KC443135,JN6518 85,KC443599,JXQ279 42,KC175138,JXQ278 45,KC580515,KC579 881,KC174878,EF56 0613 Rotavirus A NC_011507 vertebrates,human 383 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN635532,KC443029, KC580188,KC580005 ,KC580390,KC58055 3,KC579665,JN63554 3,KC443708,KC4428 81,KC769382,EF554 148,KC174899,JN651 818,DQ490545,KC58 0040,KC580058,KC5 79792,KC175061,JN6 51829,KC140590,JX4 06747,KC443576,KC 175236,KC580434,K C580601,JN258364,K C579630,KC579803, DQ146671,KC443389 ,KC580165,KC58047 9,KC442951,KC5794 98,KC443189,DQ870 493,JN605404,JN258 835,JXQ27714,KC443 378,DQ870485,KC17 5159,KC443367,KC5 80401,JXQ27736,JX9 65134,KC579647,KC 443334,KC580297,G U827406,JXQ27857,K C174974,KC443730,J XQ27758,KC579892,J N258386,JN258795,J XQ27681,KC443543, KC579680,KC443167 ,GU565063,JXQ2765 9,KC443222,KC4437 52,JN651775,KC5801 20,HQ657149,KC580 526,KC579619,GU56 5041,KC580254,KC5 80634,JN258950,KC5 80590,JXQ27641,KC5 80109,KC769338,JX9 65133,KC175203,KC 769415,KC769360,JN 827244,DQ838601,J XQ27912,KC443422, GU565052,JN258808 ,KC579553,KC44351 0,KC579691,KC4431 78,JN831209,KC1750 72,JN872865,DQ838 639,JXQ27824,KC769 459,KC579542,KC44 3697,KC579713,KC5 79586,HQ846865,KC 579983,DQ146660,K C579702,KC443784, KC175258,JXQ27692, JN651797,KC175269, KC580176,KC443565 ,JN651876,KC175104 ,KC580086,DQ87049 7,JXQ27747,KC57981 4,JN605448,HQ6611 12,KC443598,KC580 612,KC195769,KC44 3675,KC443763,HQ6 57138,KC579735,KC 580552,KC580503,JX 027965,HQ846876,K C174877,JN258901,F J169853,GU296421,J XQ27974,KC580265, KC834711,KC443288 ,KC443774,JN651894 ,HQ846854,JXQ2793 0,JF712566,KC44355 4,JN651884,KC76934 9,KC579960,KC7694 48,KC579931,KC579 840,DQ870489,KC44 2892,KC175280,KC1 75225,KC175214,KC 769437,KC443609,K C579509,JN258830,K C443499,JX271001,J XQ27945,KC193633, DQ870505,JN258375 ,KC580059,KC17493 2,KC443200,GU5650 74,KC580537,DQ146 693,KC443477,KC19 5753,DQ870501,EFS 60612,KC580346,JF5 21461,KC443719,KC 579948,KC580623,K C769481,KC443686, KC443411,DQ492669 ,JXQ27648,KC580210 ,JN651764,KC580282 ,KC579869,JXQ27813 ,KC443018,JN258342 ,KC580368,KC44348 8,KC175181,EF5606 21,JXQ27802,KC5802 43,KC579724,KC443 741,JN258853,KC580 357,JXQ27732,KC769 404,JN605426,JN258 912,JXQ27791,KC580 589,JXQ27944,KC579 475,KC579597,JXQ27 780,KC443134,JQ98 8899,KC580221,KC1 74888,GU565085,KC 442985,KC443277,JN 651840,KC175192,JF 521472,KC580412,JN 605437,KC175115,K C580177,EF560615,J N258331,KC580324, KC442903,KC193623 ,JN013988,EF554137 ,KC579746,KC57993 0,DQ838638,DQ8386 36,KC443642,KC579 971,KC443233,KC58 0074,KC579564,KC4 43311,JF712555,JN6 05415,KC442974,KC 580016,KC443400,K C443356,EF576937,J XQ27890,JN258861,K C193612,KC769470, KC443620,JXQ27908, DQ146682,KC579903 ,JN258868,KC443299 ,KC443444,KC44287 0,JXQ27778,KC58037 9,JX965135,KC44324 4,KC579520,KC8347 12,KC580567,JN8312 31,KC769316,KC442 963,JXQ27670,KC769 327,KC834713,KC44 3433,DQ146699,KC4 42996,HQ661134,KC 443466,KC580456,JN 258934,FN665677,K C443156,DQ146638, KC579947,KC579575 ,JN258397,KC580468 ,KC174866,KC57964 6,DQ490551,KC7693 05,GU199514,DQ838 637,KC443532,KC44 3255,KC580423,KC1 75126,KC443266,KC 580153,KC580232,K C175148,GU199492, JN635554,JN258886, KC579880,DQ838640 ,KC174985,JF712577 ,KC579770,JN258783 ,KC580027,KC44345 5,JN013987,JN25881 7,JXQ27708,KC44352 1,KC442940,KC5798 25,KC579914,DQ490 533,KC579757,JXQ27 868,KC579855,KC44 2929,KC175083,JN65 1851,HQ661123,JN6 51786,KC443345,HQ 846843,HQ657160,K C443587,KC580131,J XQ27856,KC579608, DQ146649,KC443664 ,JN258353,JN651862 ,KC580335,KC44363 1,KC443653,KC4429 14,KC769393,JN6518 08,KC580097,DQ490 539,KC175039,KC44 3211,JXQ27835,KC44 3145,KC580308,DQO 05109,EF560618,JN2 58923,JN651753,KC5 79531,KC579781,KC 769426,KC175028,K C443007,KC580281,J XQ27879,GU199503, KC579994,KC580491 ,JN831220,KC769371 ,KC580578,JQ68867 3,KC443323,FN6656 88,GU296420,KC580 445,KC579486,JN258 890,KC580199,KC58 0514 Rotavirus A NC_011508 vertebrates,human 392 Reoviridae,Rotavirus,Rotavirus A seg. 3 JXQ27954,KC175128, KC579844,KC579805 ,KC580425,JN651777 ,KC579772,KC44356 7,JQ688675,KC5800 88,KC443699,KC580 190,KC174868,GU56 5054,JXQ27844,KC58 0625,JN258842,KC44 3501,DQ838641,JXQ 27646,JN831222,DQ 146640,KC175260,JN 258888,KC443402,K C579477,JN013991,K C579588,KC580044, KC443490,KC443479 ,JXQ27694,JN258942 ,JXQ27746,KC443457 ,KC580493,DQ14668 4,KC580528,KC4432 02,KC580099,KC769 329,KC442942,KC76 9307,HQ661136,KC5 79794,KC443633,JXQ 27767,KC579816,JN2 58834,KC443677,JN6 05428,KC193614,KC 579748,KC579650,JX 027976,KC580267,K C769461,GU565043, HQ657151,KC579488 ,KC769384,JXQ27649 ,JXQ27711,EF554150 ,EF560620,JN258384 ,KC442965,JN605439 ,KC580285,HQ65716 2,KC580029,KC5796 51,KC580370,KC580 337,KC442953,DQ87 0499,KC580470,KC5 80555,JN651831,FN6 65690,DQ838642,JN 651895,KC769318,K C580111,JXQ27833,K C580245,KC580256, KC443721,KC195771 ,KC443732,KC44318 0,KC769351,HQ8468 78,KC174912,KC580 179,KC769340,JXQ27 922,KC175117,JN258 955,KC579843,KC76 9439,DQ870503,JXQ 27962,KC580359,KC 579950,JN258405,KC 443413,JN258394,KC 769395,HQ661125,K C580539,KC174879, KC580286,KC580603 ,DQ492671,KC58023 4,KC443688,KC4431 91,KC580155,KC174 956,GU565087,KC17 4890,KC579871,JN65 1886,JN013993,JN25 8822,KC443644,JN63 5556,KC443391,KC1 75216,KC580580,KC 579882,KC175238,D 0490547,KC195760, KC175205,JXQ27683, KC443743,JN635545, KC580212,KC579632 ,HQ846856,KC57959 9,JN258910,KC17492 3,KC769472,KC1749 45,JXQ27941,KC5799 35,KC175249,JXQ278 22,KC579610,KC579 682,KC175161,KC44 3347,KC443358,JN87 2867,KC579500,KC5 80447,JXQ27877,KC1 75030,JXQ27790,KC1 93635,KC769483,KC 175074,KC580018,K C443600,KC175052, KC443512,KC769428 ,KC580392,HQ65714 0,KC580614,KC4428 94,KC215499,JXQ277 57,KC579715,KC443 765,EF560614,KC44 3290,DQ146673,KC4 43224,KC579704,KC 174901,KC443776,E F560617,KC580201, KC579934,JXQ27809, KC579737,KC579996 ,KC579533,KC44332 5,JN258931,JQ98890 1,JN827246,KC58004 3,KC580458,KC1752 27,KC443786,KC443 158,KC442998,KC58 0122,KC579962,KC1 75019,KC175063,HQ 846867,JXQ27776,KC 580505,JN651788,KC 443435,KC580133,K C443589,FJ169855,K C443147,KC174934, KC443369,KC579522 ,KC834706,KC57976 0,KC175085,JN25878 8,KC443301,KC5796 21,KC580414,KC579 511,KC579974,DQ83 8645,KC174997,KC1 75172,KC175150,FN 665679,KC443268,K C579857,JN258373, DQ838644,KC175106 ,JN258811,GU19949 4,KC443556,KC7694 06,JXQ27723,KC5803 48,JN258863,KC5796 69,KC443020,KC442 872,KC580076,GU82 7408,JXQ27854,KC44 3622,JF712557,KC44 3313,JXQ27679,KC76 9450,KC579916,HQ6 61114,KC442987,DQ 870487,KC579555,JN 258799,KC443169,JN 258351,JN635534,D 0146701,KC443611, DQ870491,KC443523 ,JN258922,JF712568, JN605450,KC443136, KC175041,KC442905 ,KC442916,KC58015 6,JN258856,DQ8704 95,KC443710,JN6054 17,KC443534,JN2588 76,KC579544,GU565 065,JN013992,JN651 820,KC443468,KC14 0592,KC580223,KC5 80556,KC580381,KC 443446,KC443336,K C174966,GU296424, DQ838643,KC443246 ,KC580481,JXQ27867 ,KC175194,KC58000 7,KC580636,KC8347 05,JN258361,KC5805 92,KC443279,KC580 326,KC580516,KC58 0436,JXQ27899,KC17 5139,JN651871,JX96 5140,KC443666,KC7 69373,EF554139,KC 175271,JN831233,JN 605406,KC579985,JX 027734,KC174976,JN 651810,KC175008,K C579577,KC443655, KC579566,KC579894 ,JXQ27888,KC580403 ,JX271003,KC579668 ,JN831211,KC579827 ,KC580299,DQ14666 2,KC579905,DQ8386 00,JXQ27932,KC4434 24,JX965139,KC4432 57,HQ846845,JN258 336,KC443380,KC44 2883,KC580569,KC1 75282,JF712579,KC4 42976,DQ490537,GU 296425,KC443754,K C442931,KC769362,J N651853,JN651864,K C579951,DQ490553, KC580167,KC174987 ,KC443545,KC19362 5,JN651766,JXQ2780 0,KC215510,KC4432 35,JX965141,JN6517 99,JX406749,KC5800 62,GU199488,KC579 693,KC580310,KC17 5183,GU565076,EF5 60623,JXQ27669,JN6 51842,KC443578,KC 769417,KC443009,K C579783,KC580063, DQ146651,JF521463, JXQ27910,JN258899, JF521474,KC443213, KC579726,JN651755 Rotavirus A NC_011509 vertebrates,human 366 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX965142,KC443668, KC580192,KC580301 ,AB040055,KC57960 1,KC174925,KC4430 00,KC769353,DQ146 702,KC215544,KC57 9987,KC442907,JN63 5547,HQ846870,KC4 43591,KC580571,KC 579774,KC580066,K C193616,JN651768,K C443646,KC579847,J X271005,JN258814,J XQ40422,KC769397, KC443679,KC442874 ,JN651757,JN258872 ,HQ846881,KC58060 5,KC443393,JX84114 4,JF521466,KC17489 2,KC443270,KC5805 07,KC443481,JN6054 30,KC834700,JN2587 80,JF712581,KC4429 18,JN258335,KC4437 45,KC579976,GU199 496,JN831213,DQ49 2673,AY456527,KC1 75108,DQ870504,KC 175021,KC580372,K C443778,KC580627, KC834699,JN872869, KC175240,KC580135 ,JN014004,KC195758 ,JN014006,KC175043 ,JX965143,KC443690 ,KC443248,JQ98890 3,KC443514,HQ8468 48,KC580638,KC579 579,KC174989,KC44 3580,KC580289,KC1 74958,GU565056,KC 140589,JN827249,JN 651812,KC579859,G U296428,KC580582, KC769474,KC175130 ,KC579873,KC17516 3,KC443360,KC5797 63,KC579998,KC442 896,DQ146695,KC58 0101,KC443437,KC5 79818,KC443602,DQ 870492,KC579568,K C443734,KC443503, KC580383,JX841180, KC174999,JN651844, JN635536,KC769419, KC175152,KC580339 ,DQ490538,KC44320 4,KC443149,KC5798 07,KC443492,JN2589 48,KC443316,KC442 944,KC579634,KC44 3303,KC443635,JN25 8392,JN258906,KC58 0078,JF712570,KC44 3657,KC579896,DQ1 46686,KC443404,KC 580616,KC443292,JN 258839,KC579717,H 0661116,KC443448, KC580438,KC580594 ,KC443237,GU56507 8,KC174870,DQ8705 00,KC443701,JN6518 22,KC579654,JF7125 59,KC580541,KC175 119,EF554152,KC58 0427,KC580560,KC1 75284,KC579623,KC 834701,KC580203,K C442956,JN258370, DQ870507,KC580472 ,KC175087,KC19362 7,HQ661127,JX8411 43,JN831224,KC5795 02,KC174914,KC580 046,KC443022,DQ49 0555,KC579590,KC5 79938,KC580405,KC 580225,KC175273,K C580124,KC580394, KC443011,KC443193 ,KC175141,KC17501 0,JN605441,JN83123 5,KC580361,JN60541 9,KC580031,KC5802 36,JN014003,KC5799 64,KC443788,JN2588 97,KC443426,JX9651 44,GU565045,KC443 569,KC443536,FJ169 858,JN651866,KC443 171,KC579655,KC76 9430,KC175185,JN65 1900,KC580484,JF52 1477,KC442933,KC5 79907,HQ657142,KC 580158,KC579953,K C580269,JN258359,K C579937,KC580518, HQ661138,KC579796 ,KC579728,KC58011 3,KC443138,KC4437 67,KC193637,KC580 020,KC443160,JN651 801,KC769331,KC57 9918,KC443226,KC5 79695,DQ146675,KC 579829,KC579490,K C579672,KC175207, KC579750,JN258847, KC443281,JN651779, KC769463,JN651855, KC579524,JN605408, JN258880,KC580090, KC174936,KC580247 ,KC443338,JN014005 ,KC580169,JN651888 ,KC580312,KC44354 7,DQ870488,JN2589 19,JQ688678,KC443 349,KC579546,KC19 5773,JX406752,KC17 4903,JN651872,KC44 3215,KC175065,JN25 8348,KC769408,KC7 69309,HQ657164,KC 443382,KC769342,K C175076,KC174881,J N651790,KC443624, KC443415,KC175262 ,KC579513,KC76945 2,KC580067,KC4433 27,KC175218,KC579 479,KC175196,KC76 9364,KC175098,KC5 80496,KC443712,JN6 35558,JX841142,KC5 79673,KC580416,KC 580460,AY456528,K C443259,GU565067, KC215501,DQ870496 ,GU827410,KC58032 8,KC443558,KC5798 48,JN258807,KC5797 39,KC580559,KC175 229,KC443756,KC17 5251,DQ146664,KC4 42885,U36240,EF554 141,KC580530,GU29 6429,KC580495,KC4 43459,FN665682,KC 443723,DQ146642,K C580214,HQ846859, KC175054,KC442989 ,KC579535,KC58025 8,KC580483,JN25882 9,KC580449,KC4430 33,KC769375,KC579 684,FN665693,HQ65 7153,KC580181,KC5 79557,KC442978,KC 443182,DQ146653,K C769386,KC769441, KC215512,JN605452, GU565089,JN014002 ,U85998,DQ490549,J N258382,KC579706, KC442967,KC443470 ,DQ838650,KC44361 3,KC580290,KC4433 71,JN258403,KC1751 74,JN258858,KC5800 09,KC175032,KC174 947,KC579884,JN258 930,JN258792,JN651 833,KC443525,KC57 9785,JN258939,KC76 9485,KC769320,KC5 80350,KC579612 Rotavirus A NC_011510 vertebrates,human 352 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN258809,JN605451, JXQ27799,KC175042, JN635546,JN872868, KC443348,KC174988 ,KC579556,KC57969 4,KC580168,KC5802 02,AB526248,JN6518 78,JXQ27744,GU565 044,KC580134,KC57 9895,KC580180,DQ3 21496,KC443546,KC 580123,KC579761,K C580581,JN258349,K C174902,KC442906, KC580287,KC769418 ,KC443021,KC57954 5,KC174967,JXQ2793 3,KC579589,KC4437 87,JN258875,KC1749 13,JN258832,JN6518 65,KC769440,KC443 214,GU565077,AB52 6246,KC443159,KC4 43436,KC193636,KC 443524,JN651887,JX 027702,KC579986,F N665680,JN013997,K C443590,KC580626, KC579762,KC443579 ,KC443733,JN831223 ,KC443667,KC57951 2,KC443370,KC5798 17,KC443315,KC443 414,KC443645,HQ66 1126,JN258383,JN65 1811,KC443568,JN25 8340,JN258360,JXQ2 7887,JN605407,JXQ2 7975,JN635535,KC57 9653,KC443403,KC5 80517,KC175206,KC 579795,KC443634,K C443744,KC769396,J N651767,JN258884,J XQ27953,DQ838602, AB573650,GU565066 ,KC580557,HQ65715 2,KC442943,JXQ2776 6,JN013995,KC57950 1,KC580257,KC4437 66,KC443010,JXQ277 22,KC769385,HQ657 163,KC443032,JN258 787,KC579716,KC44 3225,KC579936,KC5 80448,U65924,KC76 9462,KC580570,KC5 79975,JN258855,KC5 80008,AB573872,JN6 35557,JN258404,AB5 73648,KC580371,KC 579846,KC580349,K C175184,KC580604, KC579611,KC769363 ,DQ841262,KC57987 2,KC579534,KC4429 88,KC442954,JXQ276 45,KC580338,KC443 236,KC174924,JN258 798,KC443148,JXQ27 898,GU565055,KC58 0157,KC443326,JQ6 88676,JN651756,KC7 69484,KC580540,KC 580482,KC579567,K C443678,KC443623, HQ846857,KC580246 ,KC579652,KC44346 9,KC579952,JXQ2782 1,KC580593,GU5650 88,JX271004,KC7693 30,JXQ27789,JXQ276 84,JN651800,KC5797 49,DQ492672,KC580 235,DQ490548,JXQ2 7831,KC579845,KC5 79683,KC443557,JXQ 27853,JN651854,KC5 80089,FJ169856,KCS 79633,JN258866,JN2 58954,JF521475,KC1 93615,JN258371,JN8 31212,KC579727,KC 443247,KC769429,K C443535,JXQ27940,J N258920,JXQ27779,K C443137,KC443337, KC579705,AB571047 ,DQ838604,JXQ2775 5,JN258898,KC57948 9,KC442884,KC4433 92,KC443689,JXQ279 11,KC442977,JN6517 78,KC580112,JXQ279 63,KC580100,KC580 637,FN665691,JN258 819,KC580393,KC17 5020,KC579828,KC5 79523,KC579738,KC 580224,JXQ27661,KC 769473,KC580558,K C579963,JN651832,K C580426,KC175097,J XQ27843,EF990707,K C443302,KC579806, KC769308,KC580360 ,KC579478,JN831234 ,KC175151,KC58019 1,KC769451,KC5804 59,KC579773,KC580 382,KC443491,KC58 0494,KC580415,KC4 43269,JN258841,JN6 51789,KC580030,KC 443425,KC579917,JN 605418,KC174946,K C579671,HQ846879, KC580404,KC443447 ,JF521464,HQ661137 ,JXQ27733,KC580506 ,KC580437,JXQ27812 ,KC443612,DQ24261 5,KC443170,KC4437 55, KC443722,KC443 513,KC579670,HQ84 6868,KC442955,KC4 43777,KC174977,KC 580065,JN651821,JX 027876, KC442966,K C579906,EF554151 ,J N258393,KC443181,KC 442873,KC443291 ,KC193626,JXQ27920, KC579622, KC58061 5,JQ988902,AB57364 6,KC442917,KC5804 71, KC174957, DQ490 554,JXQ27650,AY773 004,EF554140,KC44 3359,KC769374,KC5 79578, JN651843,KC5 79883,KC195759,KC 442895,KC580045,D Q321494,JXQ27707, DQ321492,KC579997 ,KC769319,KC44331 4,AB055967,KC7693 41, KC580311 ,JN2589 40, KC579858,KC769 352,JN013994,JN258 933,KC443203,KC44 3700,KC443601 ,KC5 80064, KC443502, HQ 657141 ,KC443280,D Q838603, KC579784, KC443192,KC442999 , DQ838605, J XQ2786 5,KC175195,KC5803 00,JN827247,KC5800 19, KC443711 ,JN6054 40,JX406750,KC5802 88, KC443656,HQ846 846,KC443480,HQ66 1115,GU827409,KC4 42932,KC579600,KC 580077,JN258909,KC 580529, KC443458JX 027678, KC580327,JN 013996, KC443381 ,K C580268,KC580213, KC443258,KC175250 ,JN605429,JN651899 Rotavirus A 1290xU K NC_011500 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF693219,J F693184, reassortant (UKg91290) JF693118 Rotavirus A 1290xUK NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF693121 ,JF693187 reassortant (UKg91290) Rotavirus A 1290x11 K NC_011502 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF693186,JF693120, reassortant (UKg91290) JF693220 Rotavirus A 1290xUK NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF693188,JF693122, reassortant (UKg91290) JF693221 Rotavirus A 1290xUK NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693123,JF693189 reassortant (UKg91290) 10 Rotavirus A 1290xUK NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693124,JF693190 reassortant (UKg91290) 11 Rotavirus A 1290xUK NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF693181 ,JF693115 reassortant (UKg91290) Rotavirus A 1290xUK NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF693180,JF693114 reassortant (UKg91290) Rotavirus A 1290xUK NC_011508 vertebrates,hum 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF693182,JF693116 reassortant (UKg91290) Rotavirus A 1290xUK NC_011500 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF693219,J F693184, reassortant (UKg91290) JF693118 Rotavirus A 1290xUK NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF693119,JF693185 reassortant (UKg91290) Rotavirus A 1290xUK NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF693117,JF693183, reassortant (UKg91290) JF693218 Rotavirus A AU32xUK NC_011500 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF693129,JF693223, reassortant (UKg9AU32) JF693195 Rotavirus A AU32xUK NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF693198,JF693132 reassortant (UKg9AU32) Rotavirus A AU32xUK NC_011502 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF693131,JF693224, reassortant (UKg9AU32) JF693197 Rotavirus A AU32xUK NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF693199,JF693133, reassortant (UKg9AU32) JF693225 Rotavirus A AU32xUK NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693134,JF693200 reassortant (UKg9AU32) 10 Rotavirus A AU32xUK NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693201,JF693135 reassortant (UKg9AU32) 11 Rotavirus A AU32xUK NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF693192,JF693126 reassortant (UKg9AU32) Rotavirus A AU32xUK NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF693191,JF693125 reassortant (UKg9AU32) Rotavirus A AU32xUK NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF693127,JF693193 reassortant (UKg9AU32) Rotavirus A AU32xUK NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF693130,JF693196 reassortant (UKg9AU32) Rotavirus A AU32xUK NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF693194,JF693128, reassortant (UKg9AU32) JF693222 Rotavirus A DS-1xUK NC_011500 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF693207,JF693151, reassortant (UKg9DS-1) JF693085 Rotavirus A DS-1xUK NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF693154,JF693088 reassortant (UKg9DS-1) Rotavirus A DS-1xUK NC_011502 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF693087,JF693208, reassortant (UKg9DS-1) JF693153 Rotavirus A DS-1xUK NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF693089,JF693209, reassortant (UKg9DS-1) JF693155 Rotavirus A DS-1xUK NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693156,JF693090 reassortant (UKg9DS-1) 10 Rotavirus A DS-1xUK NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693091,JF693157 reassortant (UKg9DS-1) 11 Rotavirus A DS-1xUK NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF693082,JF693148 reassortant (UKg9DS-1) Rotavirus A DS-1xUK NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF693147,JF693081 reassortant (UKg9DS-1) Rotavirus A DS-1xUK NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF693149,JF693083 reassortant (UKg9DS-1) Rotavirus A DS-1xUK NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF693152,JF693086 reassortant (UKg9DS-1) Rotavirus A DS-1xUK NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF693150,JF693206, reassortant (UKg9DS-1) JF693084 Rotavirus A DxUK NC_011500 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF693140,JF693203, reassortant (UKg9D) JF693074 Rotavirus A DxUK NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF693143,JF693077 reassortant (UKg9D) Rotavirus A DxUK NC_011502 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF693142,JF693076, reassortant (UKg9D) JF693204 Rotavirus A DxUK NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF693205,JF693144, reassortant (UKg9D) JF693078 Rotavirus A DxUK NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693079,JF693145 reassortant (UKg9D) 10 Rotavirus A DxUK NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693080,JF693146 reassortant (UKg9D) 11 Rotavirus A DxUK NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF693137,JF693071 reassortant (UKg9D) Rotavirus A DxUK NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF693136,JF693070 reassortant (UKg9D) Rotavirus A DxUK NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF693072,JF693138 reassortant (UKg9D) Rotavirus A DxUK NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF693141,JF693075 reassortant (UKg9D) Rotavirus A DxUK NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF693139,JF693202, reassortant (UKg9D) JF693073 Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 GQ149098 EC2184/ECU/G11P[6] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 GQ149101 EC2184/ECU/G11P[6] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. GQ149099 EC2184/ECU/G11P[6] 10 Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. GQ149100 EC2184/ECU/G11P[6] 11 Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 GQ149095 EC2184/ECU/G11P[6] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU488721 Hu/1290/Kenya/1991/G8 Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JQ993325 Hu/BE UBE2001/2009/G9P [6] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JQ993318 Hu/BE UBE2001/2009/G9P [6] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JQ993327 Hu/BE UBE2001/2009/G9P 10 [6] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JQ993322 Hu/BE UBE2001/2009/G9P [6] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JQ993321 Hu/BE UBE2001/2009/G9P [6] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JQ993323 Hu/BE UBE2001/2009/G9P [6] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF460829 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF460831 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF460830 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF460828 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF460832 Hu/BEUF01322/2009/G3P 10 [6] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF460833 Hu/BEUF01322/2009/G3P 11 [6] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF460824 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF460823 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF460825 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF460827 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF460826 Hu/BEUF01322/2009/G3P [6] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF460840 Hu/BEUF01498/2009/G3P [6] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF460842 Hu/BEUF01498/2009/G3P [6] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF460841 Hu/BEUF01498/2009/G3P [6] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF460839 Hu/BEUF01498/2009/G3P [6] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF460843 Hu/BEUF01498/2009/G3P 10 [6] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF460844 Hu/BEUF01498/2009/G3P 11 [6] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF460835 Hu/BEUF01498/2009/G3P [6] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF460834 Hu/BEUF01498/2009/G3P [6] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF460836 Hu/BEUF01498/2009/G3P [6] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF460838 Hu/BEUF01498/2009/G3P [6] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF460837 Hu/BEUF01498/2009/G3P [6] Rotavirus A Hu/CI- NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN887815 81/2011/KOR Rotavirus A Hu/CI- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN887818 81/2011/KOR Rotavirus A Hu/CI- NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JN887814,JN887816 81/2011/KOR 10 Rotavirus A Hu/CI- NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN887813 81/2011/KOR 11 Rotavirus A Hu/CI- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN887811 81/2011/KOR Rotavirus A Hu/CI- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN887812 81/2011/KOR Rotavirus A Hu/CI- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN887810 81/2011/KOR Rotavirus A Hu/CI- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN887819 81/2011/KOR Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348353 Hu/Cm15/2008/Cuba/G9P [8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348352 Hu/Cm42/2008/Cuba/G9P [8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU153553 Hu/DC706/USA/1980/G9 Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 EF560709 Hu/Dhaka6/BGD/2001/G11 P25 Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EF560710 Hu/Dhaka6/BGD/2001/G11 P25 Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EF560711 Hu/Dhaka6/BGD/2001/G11 10 P25 Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. EF560712 Hu/Dhaka6/BGD/2001/G11 11 P25 Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 EF560705 Hu/Dhaka6/BGD/2001/G11 P25 Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 EF560706 Hu/Dhaka6/BGD/2001/G11 P25 Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EF560707 Hu/Dhaka6/BGD/2001/G11 P25 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU153554 Hu/G2275/USA/1980/G9 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN699034 Hu/HK69/CN/1978/G5 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN699033 Hu/HK75/CN/1978/G9 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348346 Hu/Ha1/2006/Cuba/G1P[6] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348355 Hu/Ha100/2008/Cuba/G9P [8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348351 Hu/Ha16/2006/Cuba/G9P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348354 Hu/Ha21/2006/Cuba/G9P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348348 Hu/Ha45/2006/Cuba/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348347 Hu/Ha5/2006/Cuba/G1P[6] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348349 Hu/Ha67/2007/Cuba/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ348350 Hu/Ha95/2008/Cuba/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB525798 Hu/NhaTrang/V141/2006/V NM/G3 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB525799 Hu/NhaTrang/V152/2006/V NM/G3 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB605602 Hu/NhaTrang/V17/2006/VN M Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AB605598 Hu/NhaTrang/V17/2006/VN M Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB525800 Hu/NhaTrang/V173/2006/V NM/G3 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB525801 Hu/NhaTrang/V182/2006/V NM/G3 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB605603 Hu/NhaTrang/V20/2006/VN M Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AB605599 Hu/NhaTrang/V20/2006/VN M Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB605604 Hu/NhaTrang/V30/2006/VN M Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AB605600 Hu/NhaTrang/V30/2006/VN M Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB605605 Hu/NhaTrang/V32/2006/VN M Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AB605601 Hu/NhaTrang/V32/2006/VN M Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB525797 Hu/NhaTrang/V88/2006/VN M/G3 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU284736 Hu/SA3426DGM/04/G12P [6] Rotavirus A Hu/USA/06- NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF460818 242/2006/G2P[6] Rotavirus A Hu/USA/06- NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF460820 242/2006/G2P[6] Rotavirus A Hu/USA/06- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF460819 242/2006/G2P[6] Rotavirus A Hu/USA/06- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF460817 242/2006/G2P[6] Rotavirus A Hu/USA/06- NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF460821 242/2006/G2P[6] 10 Rotavirus A Hu/USA/06- NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF460822 242/2006/G2P[6] 11 Rotavirus A Hu/USA/06- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF460813 242/2006/G2P[6] Rotavirus A Hu/USA/06- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF460812 242/2006/G2P[6] Rotavirus A Hu/USA/06- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF460814 242/2006/G2P[6] Rotavirus A Hu/USA/06- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF460816 242/2006/G2P[6] Rotavirus A Hu/USA/06- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF460815 242/2006/G2P[6] Rotavirus A IAL28xUK NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF990818 reassortant (UKg9IAL28) Rotavirus A IAL28xUK NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF990817 reassortant (UKg9IAL28) Rotavirus A IAL28xUK NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF990819 reassortant (UKg9IAL28) Rotavirus A Ind/Bo/HR/B85 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF831950 Rotavirus A Ind/Bo/HR/B85 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF831951 11 Rotavirus A Ind/HR/B111 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF831958 10 Rotavirus A Ind/HR/B91 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF831955 10 Rotavirus A Ind/MP/13100 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF831944 Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF831954 Ind/MP/Buffalo/6212 10 Rotavirus A Ind/MP/C1 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF831956 10 Rotavirus A Ind/UKD/C5 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF831947 10 Rotavirus A Ind/UP/13E4 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF831945 10 Rotavirus A PxUK NC_011500 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF693096,JF693162, reassortant (UKg9P) JF693211 Rotavirus A PxUK NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF693099,JF693165 reassortant (UKg9P) Rotavirus A PxUK NC_011502 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF693212,JF693164, reassortant (UKg9P) JF693098 Rotavirus A PxUK NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF693166,JF693213, reassortant (UKg9P) JF693100 Rotavirus A PxUK NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693101,JF693167 reassortant (UKg9P) 10 Rotavirus A PxUK NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693102,JF693168 reassortant (UKg9P) 11 Rotavirus A PxUK NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF693159,JF693093 reassortant (UKg9P) Rotavirus A PxUK NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF693092,JF693158 reassortant (UKg9P) Rotavirus A PxUK NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF693094,JF693160 reassortant (UKg9P) Rotavirus A PxUK NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF693097,JF693163 reassortant (UKg9P) Rotavirus A PxUK NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF693095,JF693161, reassortant (UKg9P) JF693210 Rotavirus A RVA/Human- NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HQ650120 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HQ650122 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HQ650123 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HQ650124 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HQ650125 tc/USA/DS-1/1976/G2P[4] 10 Rotavirus A RVA/Human- NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HQ650126 tc/USA/DS-1/1976/G2P[4] 11 Rotavirus A RVA/Human- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HQ650117 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HQ650116 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HQ650118 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HQ650121 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HQ650119 tc/USA/DS-1/1976/G2P[4] Rotavirus A RVA/Human- NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JX185766 wt/ITA/ASTI23/2007/G9P8 Rotavirus A RVA/Human- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX185765 wt/ITA/ASTI23/2007/G9P8 Rotavirus A RVA/Human- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX185763 wt/ITA/ASTI23/2007/G9P8 Rotavirus A RVA/Human- NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JX185767 wt/ITA/ASTI23/2007/G9P8 10 Rotavirus A RVA/Human- NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JX185768 wt/ITA/ASTI23/2007/G9P8 11 Rotavirus A RVA/Human- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JX185759 wt/ITA/ASTI23/2007/G9P8 Rotavirus A RVA/Human- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX185758 wt/ITA/ASTI23/2007/G9P8 Rotavirus A RVA/Human- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX185760 wt/ITA/ASTI23/2007/G9P8 Rotavirus A RVA/Human- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX185762 wt/ITA/ASTI23/2007/G9P8 Rotavirus A RVA/Human- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX185761 wt/ITA/ASTI23/2007/G9P8 Rotavirus A RVA/Human- NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JX195071 wt/ITA/AV21/2010/G9P8 Rotavirus A RVA/Human- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX195070 wt/ITA/AV21/2010/G9P8 Rotavirus A RVA/Human- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX195068 wt/ITA/AV21/2010/G9P8 Rotavirus A RVA/Human- NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JX195072 wt/ITA/AV21/2010/G9P8 10 Rotavirus A RVA/Human- NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JX195073 wt/ITA/AV21/2010/G9P8 11 Rotavirus A RVA/Human- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JX195064 wt/ITA/AV21/2010/G9P8 Rotavirus A RVA/Human- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX195063 wt/ITA/AV21/2010/G9P8 Rotavirus A RVA/Human- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX195065 wt/ITA/AV21/2010/G9P8 Rotavirus A RVA/Human- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX195067 wt/ITA/AV21/2010/G9P8 Rotavirus A RVA/Human- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX195066 wt/ITA/AV21/2010/G9P8 Rotavirus A RVA/Human- NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JX195082 wt/ITA/AV28/2010/G9P8 Rotavirus A RVA/Human- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX195081 wt/ITA/AV28/2010/G9P8 Rotavirus A RVA/Human- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX195079 wt/ITA/AV28/2010/G9P8 Rotavirus A RVA/Human- NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JX195083 wt/ITA/AV28/2010/G9P8 10 Rotavirus A RVA/Human- NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JX195084 wt/ITA/AV28/2010/G9P8 11 Rotavirus A RVA/Human- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JX195075 wt/ITA/AV28/2010/G9P8 Rotavirus A RVA/Human- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX195074 wt/ITA/AV28/2010/G9P8 Rotavirus A RVA/Human- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX195076 wt/ITA/AV28/2010/G9P8 Rotavirus A RVA/Human- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX195078 wt/ITA/AV28/2010/G9P8 Rotavirus A RVA/Human- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX195077 wt/ITA/AV28/2010/G9P8 Rotavirus A RVA/Human- NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JX195093 wt/ITA/JES11/2010/G9P8 Rotavirus A RVA/Human- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX195092 wt/ITA/JES11/2010/G9P8 Rotavirus A RVA/Human- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX195090 wt/ITA/JES11/2010/G9P8 Rotavirus A RVA/Human- NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JX195094 wt/ITA/JES11/2010/G9P8 10 Rotavirus A RVA/Human- NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JX195095 wt/ITA/JES11/2010/G9P8 11 Rotavirus A RVA/Human- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JX195086 wt/ITA/JES11/2010/G9P8 Rotavirus A RVA/Human- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX195085 wt/ITA/JES11/2010/G9P8 Rotavirus A RVA/Human- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX195087 wt/ITA/JES11/2010/G9P8 Rotavirus A RVA/Human- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX195089 wt/ITA/JES11/2010/G9P8 Rotavirus A RVA/Human- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX195088 wt/ITA/JES11/2010/G9P8 Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128984 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129012 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128998 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129124 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129026 RVA/Human/NCA/125L/20 10 10/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129040 RVA/Human/NCA/125L/20 11 10/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129068 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129054 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129082 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129110 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129096 RVA/Human/NCA/125L/20 10/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128974 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129002 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128988 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129114 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129016 RVA/Human/NCA/18J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129030 RVA/Human/NCA/18J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129058 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129044 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129072 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129100 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129086 RVA/Human/NCA/18J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128975 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129003 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128989 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129115 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129017 RVA/Human/NCA/22J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129031 RVA/Human/NCA/22J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129059 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129045 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129073 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129101 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129087 RVA/Human/NCA/22J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128976 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129004 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128990 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129116 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129018 RVA/Human/NCA/24J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129032 RVA/Human/NCA/24J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129060 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129046 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129074 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129102 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129088 RVA/Human/NCA/24J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128977 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129005 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128991 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129117 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129019 RVA/Human/NCA/25J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129033 RVA/Human/NCA/25J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129061 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129047 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129075 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129103 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129089 RVA/Human/NCA/25J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128978 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129006 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128992 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129118 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129020 RVA/Human/NCA/26J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129034 RVA/Human/NCA/26J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129062 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129048 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129076 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129104 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129090 RVA/Human/NCA/26J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128979 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129007 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128993 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129119 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129021 RVA/Human/NCA/28J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129035 RVA/Human/NCA/28J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129063 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129049 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129077 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129105 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129091 RVA/Human/NCA/28J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128980 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129008 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128994 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129120 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129022 RVA/Human/NCA/41J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129036 RVA/Human/NCA/41J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129064 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129050 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129078 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129106 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129092 RVA/Human/NCA/41J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128981 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129009 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128995 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129121 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129023 RVA/Human/NCA/45J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129037 RVA/Human/NCA/45J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129065 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129051 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129079 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129107 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129093 RVA/Human/NCA/45J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128982 RVA/Human/NCA/64J/201 0/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129010 RVA/Human/NCA/64J/201 0/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128996 RVA/Human/NCA/64J/201 0/G3P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129122 RVA/Human/NCA/64J/201 0/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129024 RVA/Human/NCA/64J/201 10 0/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129038 RVA/Human/NCA/64J/201 11 0/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129066 RVA/Human/NCA/64J/201 0/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129052 RVA/Human/NCA/64J/201 0/G3P[8] \Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129080 RVA/Human/NCA/64J/201 0/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129108 RVA/Human/NCA/64J/201 0/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129094 RVA/Human/NCA/64J/201 0/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128983 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129011 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128997 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129123 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129025 RVA/Human/NCA/72J/201 10 0/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129039 RVA/Human/NCA/72J/201 11 0/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129067 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129053 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129081 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129109 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129095 RVA/Human/NCA/72J/201 0/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128972 RVA/Human/NCA/7J/2010/ G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129000 RVA/Human/NCA/7J/2010/ G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128986 RVA/Human/NCA/7J/2010/ G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129112 RVA/Human/NCA/7J/2010/ G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129014 RVA/Human/NCA/7J/2010/ 10 G1P[8] Rotavirus A NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JN129028,JN129042 RVA/Human/NCA/7J/2010/ 11 G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129056 RVA/Human/NCA/7J/2010/ G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129070 RVA/Human/NCA/7J/2010/ G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129098 RVA/Human/NCA/7J/2010/ G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129084 RVA/Human/NCA/7J/2010/ G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128973 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129001 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128987 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129113 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129015 RVA/Human/NCA/9J/2010/ 10 G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129029 RVA/Human/NCA/9J/2010/ 11 G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129057 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129043 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129071 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129099 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129085 RVA/Human/NCA/9J/2010/ G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JN128985 RVA/Human/NCA/0U2010/ G4P[6] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JN129013 RVA/Human/NCA/0U2010/ G4P[6] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JN128999 RVA/Human/NCA/0U2010/ G4P[6] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JN129125 RVA/Human/NCA/0U2010/ G4P[6] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129027 RVA/Human/NCA/0U2010/ 10 G4P[6] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JN129041 RVA/Human/NCA/0U2010/ 11 G4P[6] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JN129069 RVA/Human/NCA/0U2010/ G4P[6] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JN129055 RVA/Human/NCA/0U2010/ G4P[6] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JN129083 RVA/Human/NCA/0U2010/ G4P[6] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JN129111 RVA/Human/NCA/0U2010 /G4P[6] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JN129097 RVA/Human/NCA/0U2010 /G4P[6] Rotavirus A ST3xUK NC_011500 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF693215,JF693107, reassortant (UKg9ST3) JF693173 Rotavirus A ST3xUK NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF693176,JF693110 reassortant (UKg9ST3) Rotavirus A ST3xUK NC_011502 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF693109,JF693175, reassortant (UKg9ST3) JF693216 Rotavirus A ST3xUK NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF693217,JF693111, reassortant (UKg9ST3) JF693177 Rotavirus A ST3xUK NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693112,JF693178 reassortant (UKg9ST3) 10 Rotavirus A ST3xUK NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JF693113,JF693179 reassortant (UKg9ST3) 11 Rotavirus A ST3xUK NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF693104,JF693170 reassortant (UKg9ST3) Rotavirus A ST3xUK NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF693169,JF693103 reassortant (UKg9ST3) Rotavirus A ST3xUK NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF693171,JF693105 reassortant (UKg9ST3) Rotavirus A ST3xUK NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF693174,JF693108 reassortant (UKg9ST3) Rotavirus A ST3xUK NC_011510 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF693214,JF693106, reassortant (UKg9ST3) JF693172 Rotavirus A UK WT BR-3 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF990806 Rotavirus A UK WT BR-3 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF990805 Rotavirus A UK WT BR-3 NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF990807 Rotavirus A WaxUK NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF990829 reassortant (UKg4Wa) Rotavirus A WaxUK NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF990828 reassortant (UKg4Wa) Rotavirus A WaxUK NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF990830 reassortant (UKg4Wa) Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ347119 bovine/Arg/B383/1998 Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ347118 bovine/Arg/B383/1998 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ347116 bovine/Arg/B383/1998 Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ347120 bovine/Arg/B383/1998 10 Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ347121 bovine/Arg/B383/1998 11 Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ347112 bovine/Arg/B383/1998 Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ347111 bovine/Arg/B383/1998 Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ347113 bovine/Arg/B383/1998 Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ347115 bovine/Arg/B383/1998 Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AF144805 bovine/B223/G10 10 Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ347108 guanaco/Arg/Chubut/1999 Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ347107 guanaco/Arg/Chubut/1999 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ347105 guanaco/Arg/Chubut/1999 Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ347109 guanaco/Arg/Chubut/1999 10 Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ347110 guanaco/Arg/Chubut/1999 11 Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ347101 guanaco/Arg/Chubut/1999 Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ347100 guanaco/Arg/Chubut/1999 Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ347102 guanaco/Arg/Chubut/1999 Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ347104 guanaco/Arg/Chubut/1999 Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ347103 guanaco/Arg/Chubut/1999 Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ347130 guanaco/Arg/Rio Negro/1998 Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ347129 guanaco/Arg/Rio Negro/1998 Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ347127 guanaco/Arg/Rio Negro/1998 Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ347131 guanaco/Arg/Rio 10 Negro/1998 Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ347132 guanaco/Arg/Rio 11 Negro/1998 Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ347123 guanaco/Arg/Rio Negro/1998 Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ347122 guanaco/Arg/Rio Negro/1998 Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ347124 guanaco/Arg/Rio Negro/1998 Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ347126 guanaco/Arg/Rio Negro/1998 Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ347125 guanaco/Arg/Rio Negro/1998 Rotavirus A human- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 KC782524 wt/USA/LB1562/2010/G9P 4 Rotavirus A human- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 KC782520 wt/USA/LB1562/2010/G9P 4 Rotavirus A human- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 KC782519 wt/USA/LB1562/2010/G9P 4 Rotavirus A human- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 KC782521 wt/USA/LB1562/2010/G9P 4 Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947432 human/Bethesda/CH5446/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947434 human/Bethesda/CH5446/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947435 human/Bethesda/CH5446/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947437 human/Bethesda/CH5446/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947438 human/Bethesda/CH5446/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947429 human/Bethesda/CH5446/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947430 human/Bethesda/CH5446/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947433 human/Bethesda/CH5446/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947431 human/Bethesda/CH5446/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947896 human/Bethesda/CH5455/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947898 human/Bethesda/CH5455/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947899 human/Bethesda/CH5455/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947901 human/Bethesda/CH5455/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947902 human/Bethesda/CH5455/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947893 human/Bethesda/CH5455/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947894 human/Bethesda/CH5455/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947897 human/Bethesda/CH5455/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947895 human/Bethesda/CH5455/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947443 human/Bethesda/CH5459/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947445 human/Bethesda/CH5459/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947446 human/Bethesda/CH5459/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947448 human/Bethesda/CH5459/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947449 human/Bethesda/CH5459/ 11 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947441 human/Bethesda/CH5459/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947444 human/Bethesda/CH5459/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947442 human/Bethesda/CH5459/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947909 human/Bethesda/CH5470/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947910 human/Bethesda/CH5470/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947912 human/Bethesda/CH5470/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947913 human/Bethesda/CH5470/ 11 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947905 human/Bethesda/CH5470/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947908 human/Bethesda/CH5470/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947906 human/Bethesda/CH5470/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947454 human/Bethesda/CH5475/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947456 human/Bethesda/CH5475/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947457 human/Bethesda/CH5475/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947459 human/Bethesda/CH5475/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947460 human/Bethesda/CH5475/ 11 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947452 human/Bethesda/CH5475/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947455 human/Bethesda/CH5475/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947453 human/Bethesda/CH5475/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947467 human/Bethesda/CH5477/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947468 human/Bethesda/CH5477/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947470 human/Bethesda/CH5477/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947471 human/Bethesda/CH5477/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947462 human/Bethesda/CH5477/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947463 human/Bethesda/CH5477/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947466 human/Bethesda/CH5477/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947464 human/Bethesda/CH5477/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947920 human/Bethesda/CH5483/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947921 human/Bethesda/CH5483/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947923 human/Bethesda/CH5483/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947924 human/Bethesda/CH5483/ 11 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947916 human/Bethesda/CH5483/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947919 human/Bethesda/CH5483/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947917 human/Bethesda/CH5483/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947476 human/Bethesda/CH5484/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947478 human/Bethesda/CH5484/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947479 human/Bethesda/CH5484/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947481 human/Bethesda/CH5484/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947482 human/Bethesda/CH5484/ 11 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947474 human/Bethesda/CH5484/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947477 human/Bethesda/CH5484/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947475 human/Bethesda/CH5484/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947487 human/Bethesda/CH5488/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947489 human/Bethesda/CH5488/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947490 human/Bethesda/CH5488/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947492 human/Bethesda/CH5488/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947493 human/Bethesda/CH5488/ 11 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947485 human/Bethesda/CH5488/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947488 human/Bethesda/CH5488/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947486 human/Bethesda/CH5488/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947931 human/Bethesda/CH5498/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947932 human/Bethesda/CH5498/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947934 human/Bethesda/CH5498/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947935 human/Bethesda/CH5498/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947926 human/Bethesda/CH5498/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947927 human/Bethesda/CH5498/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947930 human/Bethesda/CH5498/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947928 human/Bethesda/CH5498/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773858 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773860 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773861 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773862 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773863 human/Bethesda/DC1208/ 10 1980/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773864 human/Bethesda/DC1208/ 11 1980/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773855 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773854 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773856 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773859 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773857 human/Bethesda/DC1208/ 1980/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947168 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947170 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947171 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ947172 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947173 human/Bethesda/DC1285/ 10 1980/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947174 human/Bethesda/DC1285/ 11 1980/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947165 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947164 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947166 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947169 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947167 human/Bethesda/DC1285/ 1980/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947234 human/Bethesda/DC129/1 976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947236 human/Bethesda/DC129/1 976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947237 human/Bethesda/DC129/1 976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947239 human/Bethesda/DC129/1 10 976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947240 human/Bethesda/DC129/1 11 976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947231 human/Bethesda/DC129/1 976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947232 human/Bethesda/DC129/1 976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947235 human/Bethesda/DC129/1 976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947233 human/Bethesda/DC129/1 976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947245 human/Bethesda/DC130/1 976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947247 human/Bethesda/DC130/1 976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947248 human/Bethesda/DC130/1 976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947250 human/Bethesda/DC130/1 10 976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947251 human/Bethesda/DC130/1 11 976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947242 human/Bethesda/DC130/1 976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947243 human/Bethesda/DC130/1 976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947246 human/Bethesda/DC130/1 976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947244 human/Bethesda/DC130/1 976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947256 human/Bethesda/DC131/1 976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947258 human/Bethesda/DC131/1 976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947259 human/Bethesda/DC131/1 976/G3P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ947260 human/Bethesda/DC131/1 976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947261 human/Bethesda/DC131/1 10 976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947262 human/Bethesda/DC131/1 11 976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947254 human/Bethesda/DC131/1 976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947257 human/Bethesda/DC131/1 976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947255 human/Bethesda/DC131/1 976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947267 human/Bethesda/DC133/1 976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947269 human/Bethesda/DC133/1 976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947270 human/Bethesda/DC133/1 976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947272 human/Bethesda/DC133/1 10 976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947273 human/Bethesda/DC133/1 11 976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947264 human/Bethesda/DC133/1 976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947265 human/Bethesda/DC133/1 976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947268 human/Bethesda/DC133/1 976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947266 human/Bethesda/DC133/1 976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947311 human/Bethesda/DC135/1 979/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947313 human/Bethesda/DC135/1 979/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947314 human/Bethesda/DC135/1 979/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947316 human/Bethesda/DC135/1 10 979/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947317 human/Bethesda/DC135/1 11 979/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947308 human/Bethesda/DC135/1 979/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947312 human/Bethesda/DC135/1 979/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947310 human/Bethesda/DC135/1 979/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773869 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773871 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773872 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773873 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773874 human/Bethesda/DC1359/ 10 1980/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773875 human/Bethesda/DC1359/ 11 1980/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773866 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773865 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773867 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773870 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773868 human/Bethesda/DC1359/ 1980/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947223 human/Bethesda/DC139/1 976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947225 human/Bethesda/DC139/1 976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947226 human/Bethesda/DC139/1 976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947228 human/Bethesda/DC139/1 10 976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947229 human/Bethesda/DC139/1 11 976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947220 human/Bethesda/DC139/1 976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947221 human/Bethesda/DC139/1 976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947224 human/Bethesda/DC139/1 976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947222 human/Bethesda/DC139/1 976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947742 human/Bethesda/DC140/1 975/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947744 human/Bethesda/DC140/1 975/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947745 human/Bethesda/DC140/1 975/G3P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ947746 human/Bethesda/DC140/1 975/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947747 human/Bethesda/DC140/1 10 975/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947748 human/Bethesda/DC140/1 11 975/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947738 human/Bethesda/DC140/1 975/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947740 human/Bethesda/DC140/1 975/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947741 human/Bethesda/DC140/1 975/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947190 human/Bethesda/DC1455/ 1975/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947192 human/Bethesda/DC1455/ 1975/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947193 human/Bethesda/DC1455/ 1975/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947195 human/Bethesda/DC1455/ 10 1975/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947196 human/Bethesda/DC1455/ 11 1975/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947187 human/Bethesda/DC1455/ 1975/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947186 human/Bethesda/DC1455/ 1975/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947188 human/Bethesda/DC1455/ 1975/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947191 human/Bethesda/DC1455/ 1975/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947189 human/Bethesda/DC1455/ 1975/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947278 human/Bethesda/DC1494/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947280 human/Bethesda/DC1494/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947281 human/Bethesda/DC1494/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947283 human/Bethesda/DC1494/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947284 human/Bethesda/DC1494/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947275 human/Bethesda/DC1494/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947276 human/Bethesda/DC1494/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947279 human/Bethesda/DC1494/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947277 human/Bethesda/DC1494/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947289 human/Bethesda/DC1496/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947291 human/Bethesda/DC1496/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947292 human/Bethesda/DC1496/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947294 human/Bethesda/DC1496/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947295 human/Bethesda/DC1496/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947286 human/Bethesda/DC1496/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947287 human/Bethesda/DC1496/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947290 human/Bethesda/DC1496/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947288 human/Bethesda/DC1496/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947344 human/Bethesda/DC1497/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947346 human/Bethesda/DC1497/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947347 human/Bethesda/DC1497/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947349 human/Bethesda/DC1497/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947350 human/Bethesda/DC1497/ 11 1976/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947340 human/Bethesda/DC1497/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947342 human/Bethesda/DC1497/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947345 human/Bethesda/DC1497/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947343 human/Bethesda/DC1497/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947355 human/Bethesda/DC1505/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947357 human/Bethesda/DC1505/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947358 human/Bethesda/DC1505/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947360 human/Bethesda/DC1505/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947361 human/Bethesda/DC1505/ 11 1976/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947351 human/Bethesda/DC1505/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947353 human/Bethesda/DC1505/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947356 human/Bethesda/DC1505/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947354 human/Bethesda/DC1505/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947179 human/Bethesda/DC1563/ 1974/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947181 human/Bethesda/DC1563/ 1974/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947182 human/Bethesda/DC1563/ 1974/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947184 human/Bethesda/DC1563/ 10 1974/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947185 human/Bethesda/DC1563/ 11 1974/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947176 human/Bethesda/DC1563/ 1974/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947177 human/Bethesda/DC1563/ 1974/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947180 human/Bethesda/DC1563/ 1974/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947178 human/Bethesda/DC1563/ 1974/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947775 human/Bethesda/DC1600/ 1980/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947777 human/Bethesda/DC1600/ 1980/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947778 human/Bethesda/DC1600/ 1980/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947780 human/Bethesda/DC1600/ 10 1980/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947781 human/Bethesda/DC1600/ 11 1980/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947772 human/Bethesda/DC1600/ 1980/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947771 human/Bethesda/DC1600/ 1980/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947773 human/Bethesda/DC1600/ 1980/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947776 human/Bethesda/DC1600/ 1980/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947774 human/Bethesda/DC1600/ 1980/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947753 human/Bethesda/DC168/1 976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947755 human/Bethesda/DC168/1 976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947756 human/Bethesda/DC168/1 976/G3P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ947757 human/Bethesda/DC168/1 976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947758 human/Bethesda/DC168/1 10 976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947759 human/Bethesda/DC168/1 11 976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947751 human/Bethesda/DC168/1 976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947754 human/Bethesda/DC168/1 976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947752 human/Bethesda/DC168/1 976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947322 human/Bethesda/DC1730/ 1979/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947324 human/Bethesda/DC1730/ 1979/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947325 human/Bethesda/DC1730/ 1979/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947327 human/Bethesda/DC1730/ 10 1979/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947328 human/Bethesda/DC1730/ 11 1979/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947323 human/Bethesda/DC1730/ 1979/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947321 human/Bethesda/DC1730/ 1979/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947300 human/Bethesda/DC1898/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947302 human/Bethesda/DC1898/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947303 human/Bethesda/DC1898/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947305 human/Bethesda/DC1898/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947306 human/Bethesda/DC1898/ 11 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947298 human/Bethesda/DC1898/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947301 human/Bethesda/DC1898/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947299 human/Bethesda/DC1898/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947808 human/Bethesda/DC2069/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947810 human/Bethesda/DC2069/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947811 human/Bethesda/DC2069/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947813 human/Bethesda/DC2069/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947814 human/Bethesda/DC2069/ 11 1976/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947804 human/Bethesda/DC2069/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947806 human/Bethesda/DC2069/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947809 human/Bethesda/DC2069/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947807 human/Bethesda/DC2069/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947819 human/Bethesda/DC2081/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947821 human/Bethesda/DC2081/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947822 human/Bethesda/DC2081/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947824 human/Bethesda/DC2081/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947825 human/Bethesda/DC2081/ 11 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947817 human/Bethesda/DC2081/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947820 human/Bethesda/DC2081/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947818 human/Bethesda/DC2081/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947830 human/Bethesda/DC2102/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947832 human/Bethesda/DC2102/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947833 human/Bethesda/DC2102/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947835 human/Bethesda/DC2102/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947836 human/Bethesda/DC2102/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947827 human/Bethesda/DC2102/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947828 human/Bethesda/DC2102/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947831 human/Bethesda/DC2102/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947829 human/Bethesda/DC2102/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947841 human/Bethesda/DC2106/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947843 human/Bethesda/DC2106/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947844 human/Bethesda/DC2106/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947846 human/Bethesda/DC2106/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947847 human/Bethesda/DC2106/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947838 human/Bethesda/DC2106/ 1976/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947837 human/Bethesda/DC2106/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947839 human/Bethesda/DC2106/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947842 human/Bethesda/DC2106/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947840 human/Bethesda/DC2106/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947377 human/Bethesda/DC2109/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947379 human/Bethesda/DC2109/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947380 human/Bethesda/DC2109/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947382 human/Bethesda/DC2109/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947383 human/Bethesda/DC2109/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947374 human/Bethesda/DC2109/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947378 human/Bethesda/DC2109/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947376 human/Bethesda/DC2109/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947388 human/Bethesda/DC2114/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947390 human/Bethesda/DC2114/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947391 human/Bethesda/DC2114/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947393 human/Bethesda/DC2114/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947394 human/Bethesda/DC2114/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947385 human/Bethesda/DC2114/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947386 human/Bethesda/DC2114/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947389 human/Bethesda/DC2114/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947387 human/Bethesda/DC2114/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947399 human/Bethesda/DC2119/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947401 human/Bethesda/DC2119/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947402 human/Bethesda/DC2119/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947404 human/Bethesda/DC2119/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947405 human/Bethesda/DC2119/ 11 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947397 human/Bethesda/DC2119/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947400 human/Bethesda/DC2119/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947398 human/Bethesda/DC2119/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947410 human/Bethesda/DC2171/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947412 human/Bethesda/DC2171/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947413 human/Bethesda/DC2171/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947415 human/Bethesda/DC2171/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947416 human/Bethesda/DC2171/ 11 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947408 human/Bethesda/DC2171/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947411 human/Bethesda/DC2171/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947409 human/Bethesda/DC2171/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947852 human/Bethesda/DC2212/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947854 human/Bethesda/DC2212/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947855 human/Bethesda/DC2212/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947857 human/Bethesda/DC2212/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947858 human/Bethesda/DC2212/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947849 human/Bethesda/DC2212/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947850 human/Bethesda/DC2212/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947853 human/Bethesda/DC2212/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947851 human/Bethesda/DC2212/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947421 human/Bethesda/DC2238/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947423 human/Bethesda/DC2238/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947424 human/Bethesda/DC2238/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947426 human/Bethesda/DC2238/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947427 human/Bethesda/DC2238/ 11 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947419 human/Bethesda/DC2238/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947422 human/Bethesda/DC2238/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947420 human/Bethesda/DC2238/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947863 human/Bethesda/DC2239/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947865 human/Bethesda/DC2239/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947866 human/Bethesda/DC2239/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947868 human/Bethesda/DC2239/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947869 human/Bethesda/DC2239/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947860 human/Bethesda/DC2239/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947861 human/Bethesda/DC2239/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947864 human/Bethesda/DC2239/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947862 human/Bethesda/DC2239/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773880 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773882 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773883 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773884 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773885 human/Bethesda/DC2241/ 10 1977/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773886 human/Bethesda/DC2241/ 11 1977/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773877 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773876 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773878 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773881 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773879 human/Bethesda/DC2241/ 1977/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947874 human/Bethesda/DC2262/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947876 human/Bethesda/DC2262/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947877 human/Bethesda/DC2262/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947879 human/Bethesda/DC2262/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947880 human/Bethesda/DC2262/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947871 human/Bethesda/DC2262/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947872 human/Bethesda/DC2262/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947875 human/Bethesda/DC2262/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947873 human/Bethesda/DC2262/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947885 human/Bethesda/DC2266/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947887 human/Bethesda/DC2266/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947888 human/Bethesda/DC2266/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947890 human/Bethesda/DC2266/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947891 human/Bethesda/DC2266/ 11 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947883 human/Bethesda/DC2266/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947886 human/Bethesda/DC2266/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947884 human/Bethesda/DC2266/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947212 human/Bethesda/DC23/19 76/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947214 human/Bethesda/DC23/19 76/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947215 human/Bethesda/DC23/19 76/G3P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ947216 human/Bethesda/DC23/19 76/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947217 human/Bethesda/DC23/19 10 76/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947218 human/Bethesda/DC23/19 11 76/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947208 human/Bethesda/DC23/19 76/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947213 human/Bethesda/DC23/19 76/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947211 human/Bethesda/DC23/19 76/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773891 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773893 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773894 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773895 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773896 human/Bethesda/DC4320/ 10 1988/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773897 human/Bethesda/DC4320/ 11 1988/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773888 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773887 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773889 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773892 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773890 human/Bethesda/DC4320/ 1988/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773902 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773904 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773905 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773906 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773907 human/Bethesda/DC4608/ 10 1980/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773908 human/Bethesda/DC4608/ 11 1980/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773899 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773898 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773900 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773903 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773901 human/Bethesda/DC4608/ 1980/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773913 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773915 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773916 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773917 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773918 human/Bethesda/DC4613/ 10 1980/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773919 human/Bethesda/DC4613/ 11 1980/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773910 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773909 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773911 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773914 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773912 human/Bethesda/DC4613/ 1980/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947366 human/Bethesda/DC4772/ 1976/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947368 human/Bethesda/DC4772/ 1976/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947369 human/Bethesda/DC4772/ 1976/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947371 human/Bethesda/DC4772/ 10 1976/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947372 human/Bethesda/DC4772/ 11 1976/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947363 human/Bethesda/DC4772/ 1976/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947362 human/Bethesda/DC4772/ 1976/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947364 human/Bethesda/DC4772/ 1976/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947367 human/Bethesda/DC4772/ 1976/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947365 human/Bethesda/DC4772/ 1976/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773924 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773926 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773927 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773928 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773929 human/Bethesda/DC4996/ 10 1977/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773930 human/Bethesda/DC4996/ 11 1977/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773921 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773920 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773922 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773925 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773923 human/Bethesda/DC4996/ 1977/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773935 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773937 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773938 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773939 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773940 human/Bethesda/DC5064/ 10 1977/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773941 human/Bethesda/DC5064/ 11 1977/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773932 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773931 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773933 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773936 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773934 human/Bethesda/DC5064/ 1977/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773946 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773948 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773949 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773950 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773951 human/Bethesda/DC5115/ 10 1977/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773952 human/Bethesda/DC5115/ 11 1977/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773943 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773942 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773944 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773947 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773945 human/Bethesda/DC5115/ 1977/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947201 human/Bethesda/DC5142/ 1975/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947203 human/Bethesda/DC5142/ 1975/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947204 human/Bethesda/DC5142/ 1975/G3P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ947205 human/Bethesda/DC5142/ 1975/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947206 human/Bethesda/DC5142/ 10 1975/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947207 human/Bethesda/DC5142/ 11 1975/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947197 human/Bethesda/DC5142/ 1975/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947199 human/Bethesda/DC5142/ 1975/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947202 human/Bethesda/DC5142/ 1975/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947200 human/Bethesda/DC5142/ 1975/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947498 human/Bethesda/DC5491/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947500 human/Bethesda/DC5491/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947501 human/Bethesda/DC5491/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947503 human/Bethesda/DC5491/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947504 human/Bethesda/DC5491/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947495 human/Bethesda/DC5491/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947496 human/Bethesda/DC5491/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947499 human/Bethesda/DC5491/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947497 human/Bethesda/DC5491/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947509 human/Bethesda/DC5544/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947511 human/Bethesda/DC5544/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947512 human/Bethesda/DC5544/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947514 human/Bethesda/DC5544/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947515 human/Bethesda/DC5544/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947506 human/Bethesda/DC5544/ 1991/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947505 human/Bethesda/DC5544/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947507 human/Bethesda/DC5544/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947510 human/Bethesda/DC5544/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947508 human/Bethesda/DC5544/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947520 human/Bethesda/DC5549/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947522 human/Bethesda/DC5549/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947523 human/Bethesda/DC5549/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947525 human/Bethesda/DC5549/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947526 human/Bethesda/DC5549/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947517 human/Bethesda/DC5549/ 1991/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947516 human/Bethesda/DC5549/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947518 human/Bethesda/DC5549/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947521 human/Bethesda/DC5549/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947519 human/Bethesda/DC5549/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947940 human/Bethesda/DC5553/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947942 human/Bethesda/DC5553/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947943 human/Bethesda/DC5553/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947945 human/Bethesda/DC5553/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947946 human/Bethesda/DC5553/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947937 human/Bethesda/DC5553/ 1991/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947936 human/Bethesda/DC5553/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947938 human/Bethesda/DC5553/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947941 human/Bethesda/DC5553/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947939 human/Bethesda/DC5553/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947786 human/Bethesda/DC5710/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947788 human/Bethesda/DC5710/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947789 human/Bethesda/DC5710/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947791 human/Bethesda/DC5710/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947792 human/Bethesda/DC5710/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947783 human/Bethesda/DC5710/ 1991/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947782 human/Bethesda/DC5710/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947784 human/Bethesda/DC5710/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947787 human/Bethesda/DC5710/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947785 human/Bethesda/DC5710/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947333 human/Bethesda/DC5728/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947335 human/Bethesda/DC5728/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947336 human/Bethesda/DC5728/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947338 human/Bethesda/DC5728/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947339 human/Bethesda/DC5728/ 11 1991/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947330 human/Bethesda/DC5728/ 1991/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947329 human/Bethesda/DC5728/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947334 human/Bethesda/DC5728/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947332 human/Bethesda/DC5728/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947797 human/Bethesda/DC5751/ 1991/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947799 human/Bethesda/DC5751/ 1991/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947800 human/Bethesda/DC5751/ 1991/G3P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ947801 human/Bethesda/DC5751/ 1991/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947802 human/Bethesda/DC5751/ 10 1991/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947803 human/Bethesda/DC5751/ 11 1991/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947793 human/Bethesda/DC5751/ 1991/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947795 human/Bethesda/DC5751/ 1991/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947798 human/Bethesda/DC5751/ 1991/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947796 human/Bethesda/DC5751/ 1991/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ947764 human/Bethesda/DC792/1 980/G3P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ947766 human/Bethesda/DC792/1 980/G3P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ947767 human/Bethesda/DC792/1 980/G3P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947769 human/Bethesda/DC792/1 10 980/G3P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ947770 human/Bethesda/DC792/1 11 980/G3P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ947761 human/Bethesda/DC792/1 980/G3P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ947760 human/Bethesda/DC792/1 980/G3P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ947762 human/Bethesda/DC792/1 980/G3P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ947765 human/Bethesda/DC792/1 980/G3P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ947763 human/Bethesda/DC792/1 980/G3P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773957 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773959 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773960 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773961 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773962 human/Bethesda/DC827/1 10 978/G4P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773963 human/Bethesda/DC827/1 11 978/G4P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773954 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773953 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773955 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773958 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773956 human/Bethesda/DC827/1 978/G4P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773770 human/USA/2007719698/2 007/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773772 human/USA/2007719698/2 0071G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773773 human/USA/2007719698/2 007/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773774 human/USA/2007719698/2 007/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773775 human/USA/2007719698/2 10 007/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773776 human/USA/2007719698/2 11 007/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773767 human/USA/2007719698/2 007/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773766 human/USA/2007719698/2 007/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773768 human/USA/2007719698/2 007/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773771 human/USA/2007719698/2 007/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773769 human/USA/2007719698/2 007/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773759 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773761 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773762 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773763 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773764 human/USA/2007719739/2 10 007/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773765 human/USA/2007719739/2 11 007/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773756 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773755 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773757 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 HM773760 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 HM773758 human/USA/2007719739/2 007/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 HM773748 human/USA/2007719825/2 007/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 HM773750 human/USA/2007719825/2 007/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 HM773751 human/USA/2007719825/2 007/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 HM773752 human/USA/2007719825/2 007/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773753 human/USA/2007719825/2 10 007/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. HM773754 human/USA/2007719825/2 11 007/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 HM773745 human/USA/2007719825/2 007/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 HM773744 human/USA/2007719825/2 007/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 HM773746 human/USA/2007719825/2 007/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490334 human/Victoria/CK00026/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490332 human/Victoria/CK00026/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490333 human/Victoria/CK00026/2 005/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490338 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490342 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490337 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490341 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490340 human/Victoria/CK00027/2 10 054/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490339 human/Victoria/CK00027/2 11 054/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490345 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490336 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490346 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490343 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490344 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490357 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490352 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490348 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490351 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490350 human/Victoria/CK00028/2 10 005/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490349 human/Victoria/CK00028/2 11 005/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490356 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490347 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490355 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490353 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490354 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490360 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490363 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490359 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490368 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490362 human/Victoria/CK00029/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490361 human/Victoria/CK00029/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490367 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490358 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490366 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490364 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490365 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490371 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490375 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490370 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490374 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490373 human/Victoria/CK00030/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490372 human/Victoria/CK00030/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490379 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490369 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490377 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490376 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490378 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490382 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490386 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490381 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490385 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490384 human/Victoria/CK00032/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490383 human/Victoria/CK00032/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490390 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490380 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490389 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490387 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490388 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490393 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490397 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490392 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490396 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490395 human/Victoria/CK00033/2 10 007/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490394 human/Victoria/CK00033/2 11 007/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490401 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490391 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490400 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490398 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490399 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490410 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490407 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490403 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490406 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490405 human/Victoria/CK00034/2 10 007/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490404 human/Victoria/CK00034/2 11 007/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490412 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490402 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490411 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490408 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490409 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490415 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490419 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490414 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490418 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490417 human/Victoria/CK00035/2 10 005/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490416 human/Victoria/CK00035/2 11 005/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490423 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490413 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490422 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490420 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490421 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490434 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490429 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490425 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490428 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490427 human/Victoria/CK00036/2 10 005/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490426 human/Victoria/CK00036/2 11 005/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490433 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490424 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490432 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490430 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490431 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490443 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490439 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490436 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490444 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490438 human/Victoria/CK00037/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490437 human/Victoria/CK00037/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490445 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490435 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490442 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490440 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490441 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490448 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490452 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490447 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490451 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490450 human/Victoria/CK00039/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490449 human/Victoria/CK00039/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490456 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490446 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490455 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490453 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490454 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490459 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490463 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490458 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490462 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490461 human/Victoria/CK00040/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490460 human/Victoria/CK00040/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490467 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490457 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490466 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490464 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490465 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490470 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490474 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490469 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490473 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490472 human/Victoria/CK00041/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490471 human/Victoria/CK00041/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490478 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490468 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490477 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490475 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490476 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490481 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490485 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490480 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490484 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490483 human/Victoria/CK00043/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490482 human/Victoria/CK00043/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490489 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490479 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490488 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490486 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490487 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490495 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490499 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490494 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490498 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490497 human/Victoria/CK00045/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490496 human/Victoria/CK00045/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490493 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490490 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490492 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490500 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490491 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490503 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490507 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490502 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490506 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490505 human/Victoria/CK00046/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490504 human/Victoria/CK00046/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490511 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490501 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490510 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490508 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490509 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490514 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490518 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490513 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490517 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490516 human/Victoria/CK00047/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490515 human/Victoria/CK00047/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490522 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490512 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490521 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490519 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490520 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490525 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490529 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490524 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490528 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490527 human/Victoria/CK00048/2 10 004/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490526 human/Victoria/CK00048/2 11 004/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490533 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490523 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490532 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490530 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490531 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490536 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490540 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490535 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490539 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490538 human/Victoria/CK00049/2 10 004/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490537 human/Victoria/CK00049/2 11 004/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490544 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490534 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490542 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490541 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490543 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490553 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490550 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490546 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490549 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490548 human/Victoria/CK00050/2 10 005/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490547 human/Victoria/CK00050/2 11 005/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490555 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490545 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490552 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490551 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490554 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A pheasant- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX204816 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX204818 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JX204812 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX204811 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX204813 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX204815 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX204814 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 FN393054,FN393055 pheasant/HUN/2008 ,FN393056 Rotavirus A sable NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ495130 antelope/G6P[14] Rotavirus A sable NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ495134 antelope/G6P[14] Rotavirus A sable NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ495132 antelope/G6P[14] Rotavirus A sable NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ495133 antelope/G6P[14] Rotavirus A sable NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ495135 antelope/G6P[14] 10 Rotavirus A sable NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ495136 antelope/G6P[14] 11 Rotavirus A sable NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ495127 antelope/G6P[14] Rotavirus A sable NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ495126 antelope/G6P[14] Rotavirus A sable NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ495128 antelope/G6P[14] Rotavirus A sable NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ495131 antelope/G6P[14] Rotavirus A sable NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ495129 antelope/G6P[14] Rotavirus A strain 116E/AG NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ361205 Rotavirus A strain 116E/AG NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ361207 Rotavirus A strain 116E/AG NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ361208 Rotavirus A strain 116E/AG NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ361209 Rotavirus A strain 116E/AG NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ361210 10 Rotavirus A strain 116E/AG NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ361211 11 Rotavirus A strain 116E/AG NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ361202 Rotavirus A strain 116E/AG NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ361201 Rotavirus A strain 116E/AG NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ361203 Rotavirus A strain 116E/AG NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ361206 Rotavirus A strain 116E/AG NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ361204 Rotavirus A turkey- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX204827 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX204829 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JX204823 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX204822 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX204824 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX204826 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX204825 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus B NC_021541 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 1 M97203 Rotavirus B NC_021544 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 6 AF079157 Rotavirus B NC_021549 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. AF079158 11 Rotavirus C NC_007543 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 6 AJ132203 Rotavirus C NC_007544 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 7 AJ132204 Rotavirus C NC_007545 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 9 AJ132205 Rotavirus C NC_007546 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 2 AJ303139 Rotavirus C NC_007547 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 1 AJ304859 Rotavirus C NC_007569 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. M81488 10 Rotavirus C NC_007570 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus C seg. 5 AF162434,M88768,E F528570,X59843 Rotavirus C NC_007571 vertebrates,human 15 Reoviridae,Rotavirus,Rotavirus C seg. 8 U20990,U20989,U20 994,U20991,U20993, X77257,U20992,X772 58,EF528571,X77256 ,AJ549087,U20996,U 20987,U20995,U2098 8 Rotavirus C NC_007572 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 3 X79442 Rotavirus C NC_007573 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. X83967 11 Rotavirus C NC_007574 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 4 X96697 Rotavirus F NC_021625 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 1 JN596591 chicken/03V0568/DEU/2003 Rotavirus F NC_021626 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 2 JQ919995 chicken/03V0568/DEU/2003 Rotavirus F NC_021627 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 9 JQ919998 chicken/03V0568/DEU/2003 Rotavirus F NC_021628 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 8 JQ920000 chicken/03V0568/DEU/2003 Rotavirus F NC_021629 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. JQ920003 chicken/03V0568/DEU/2003 10 Rotavirus F NC_021630 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 4 JQ919996 chicken/03V0568/DEU/2003 Rotavirus F NC_021631 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 3 JQ919997 chicken/03V0568/DEU/2003 Rotavirus F NC_021632 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 5 JQ919999 chicken/03V0568/DEU/2003 Rotavirus F NC_021633 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 7 JQ920001 chicken/03V0568/DEU/2003 Rotavirus F NC_021634 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. JQ920002 chicken/03V0568/DEU/2003 11 Rotavirus F NC_021635 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 6 HQ403603 chicken/03V0568/DEU/2003 Rotavirus G NC_021580 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920004 chicken/03V0567/DEU/2003 Rotavirus G NC_021581 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920006 chicken/03V0567/DEU/2003 Rotavirus G NC_021582 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920007 chicken/03V0567/DEU/2003 Rotavirus G NC_021583 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920008 chicken/03V0567/DEU/2003 Rotavirus G NC_021584 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920009 chicken/03V0567/DEU/2003 Rotavirus G NC_021585 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920010 chicken/03V0567/DEU/2003 Rotavirus G NC_021586 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920011 chicken/03V0567/DEU/2003 Rotavirus G NC_021587 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920012 chicken/03V0567/DEU/2003 Rotavirus G NC_021588 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — HQ403604 chicken/03V0567/DEU/2003 Rotavirus G NC_021589 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920005 chicken/03V0567/DEU/2003 Rotavirus G NC_021590 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JN596592 chicken/03V0567/DEU/2003 Rotavirus G1 NC_011503 vertebrates,human 11 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU839916,EU839911 ,EU839909,EU83991 3,EU839912,EU8399 10,EU839915,EU839 908,EU839907,EU83 9906,EU839914 19 Rotavirus G1 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AY159645,AY159638 10 ,AY159631,AY15963 6,AY159632,AY1596 46,AY159633,AY159 642,AY159643,AY15 9634,AY159644,AY1 59641,AY159640,AY 159630,AY159637,A Y159639,AY159648, AY159635,AY159647 Rotavirus G10 NC_011503 vertebrates,human 7 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY816181,JF681943, AY843333,AY816182 ,AY855063,JF681941 ,AY843332 Rotavirus G10 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AY855068 10 Rotavirus G12 NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 EU839967,EU839973 Rotavirus G12 NC_011502 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU839968,EU839974 Rotavirus G12 NC_011503 vertebrates,human 18 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB436818,AB436813 ,EU839943,EU83993 4,AB436814,EU8399 44,AB436815,EU839 942,EF059916,AB436 816,AB306271,AB43 6817,AB306270,EF05 9917,AB306268,EU8 39935,AB306269,AB 436819 Rotavirus G12 NC_011504 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. EU839969,EF059919 10 ,EU839975,EF059918 Rotavirus G12 NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. EU839970,EU839976 11 Rotavirus G12 NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU839965,EU839971 Rotavirus G12 NC_011510 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 4 EF059921,EF059920 Rotavirus G2 NC_011503 vertebrates,human 16 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY707784,EU839925 ,EU839919,EU83992 1,AY707785,EU8399 17,EU839926,EU839 918,EU839923,DQ47 8581,EU839924,EU8 39920,EU839922,EU 839928,AY707786,E U839927 Rotavirus G2 NC_011504 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. AY159649,AF401756, 10 EU839964 Rotavirus G2 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU839963 Rotavirus G3 NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 AY740735 Rotavirus G3 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 AY740734 Rotavirus G3 NC_011502 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 8 JQ358771,AY740733 Rotavirus G3 NC_011503 vertebrates,human 51 Reoviridae,Rotavirus,Rotavirus A seg. 9 EF495119,EF495124, AY707791,D86276,E F495121,EF495127,D 0904498,D86266,D8 6280,D86264,D86282 ,JQ358764,D86269,D 86265,AY707789,AY 707792,EF495122,D 0904499,DQ995488, DQ995489,D86283,D 0904503,EF495118, DQ904500,DQ90450 5,AY870661,DQ9045 06,EF495120,D86284 ,D86281,DQ904502, D86279,DQ904501,D 86271,DQ995490,D8 72,AY900173,AY707 794,EF495126,D8627 8,D86268,D86267,D8 6274,EF495123,AY74 0736,DQ904504,AY7 07793,EF495125,D86 275 Rotavirus G3 NC_011504 vertebrates,human 21 Reoviridae,Rotavirus,Rotavirus A seg. AB008240,AB008236 10 ,AB008234,AB00824 6,AB008230,AB0082 33,AB008237,AY740 732,AB008242,AB0O 8238,AB008243,AB0 08231,AB008244,AB 008232,AB008245,A B008248,AB008247, AB008241,AB008239 ,AB008229,AB00823 5 Rotavirus G3 NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JQ358774,AY740731 11 Rotavirus G3 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 AY740740 Rotavirus G3 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 AY740741 Rotavirus G3 NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 AY740739 Rotavirus G3 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AY740737 Rotavirus G3 NC_011510 vertebrates,human 20 Reoviridae,Rotavirus,Rotavirus A seg. 4 AY740738,AB008277 ,AB008279,AB00827 8,AB008290,AB0082 91,AB008282,AB0O8 289,AB008281,AB0O 8272,AB008273,AB0 08274,AB008285,AB 008275,AB008284,A B008286,AB008283, AB008280,AB008276 ,AB008288 Rotavirus G4 NC_011503 vertebrates,human 33 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB012066,AB012074 ,AF161822,AB039035 ,AB012075,AB03902 6,AB039027,AB0120 71,AB039025,AB012 078,AF161821,AB039 029,AF161823,AB012 069,AF161817,AB012 065,AB012079,AB03 9028,AB012072,AF16 1818,AB039032,AB0 12077,AB012067,AB 012076,AB012073,A B039031,AB012068, AB012070,AF161820, AB039030,AF161819, AB039034,AB039033 Rotavirus G4 NC_011504 vertebrates,human 33 Reoviridae,Rotavirus,Rotavirus A seg. AB008255,AB008261 10 ,AF161810,AB043069 ,AF161815,AB043026 ,AB008251,AB00826 0,AB008253,AB0082 62,AB008249,AF1618 11,AB043072,AB043 075,AF161813,AB0O8 258,AB043076,AF161 816,AB008259,AB0O 8252,AB008263,AB0 43077,AB008256,AB 043073,AB043070,A B043078,AB043074, AF161814,AB008250, AB043071,AB008257 ,AB008254,AF161812 Rotavirus G6 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF532202 Rotavirus G8 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY855064 Rotavirus G8 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AF045228 Rotavirus G9 NC_011503 vertebrates,human 156 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY253834,AJ250544, AB436831,AJ250276, EF199728,AB436820, AY699298,AB436832 ,AY262748,AY69930 2,AY307092,AY3070 88,AY307094,AB436 833,AY866500,AY87 9296,AY699301,EF19 9729,AY253835,AY6 99291,FJ695604,EF1 99735,AJ250275,AY2 11065,AJ250270,EU8 39936,AJ250269,DQ 647423,EU839929,E U839939,EF199736, AB436821,DQ056298 ,AY699292,AB09175 2,EF532837,AY69929 0,AB436822,EF19973 8,AB091755,EU8399 37,AY262747,AY211 067,AJ250268,AB364 369,EU839933,AY25 3836,AB436834,AJ25 0274,EU839932,AY6 99293,DQ056299,AJ 250277,DQ056300,E F199737,HQ018933,J F703095,DQ096290, AY695811,AY211068 ,HQ018932,AY25383 3,AY866504,EU8399 40,AY699294,AJ4911 79,DQ056297,EF199 730,AB091750,AJ491 177,AB436826,DQ05 6296,AY699297,AJ25 0272,EU839930,AB0 91751,JF703094,DQO 96288,EF199732,EF1 99726,AB091748,EF1 99734,AY253838,DQ 990318,AY262746,A Y253839,EF687001,E U839938,AY699296, AY184813,AY307087 ,AB436824,AJ491184 ,AY699299,AB36438 0,AB045372,DQ0962 93,EF199727,AJ2502 73,EF059922,DQ096 292,AB436835,AY30 7086,AB436830,AB0 91754,AY307093,DQ 096289,AY699304,A Y695809,AB091749, AY262749,EF199725, AB091756,DQ990319 ,AY307091,AJ491175 ,AY866502,AB43682 7,AB436825,AB0453 73,HQ018934,DQ096 294,AY699303,DQ99 0317,DQ096291,AB4 36829,AY866505,AY 253837,EU753963,A B436823,AY866501, AY866503,AB091747 ,EU839941,EF19973 1,AB436828,AY3070 85,JF703096,AB0917 53,AF359358,AJ2505 40,AY307090,DQ490 173,EF199733,AB091 746,AY816184,AB04 5374,AJ250271,EU83 9931,AJ491172,AJ25 0545,AY699300,AY3 07089,AY699295,AY 211066,JF703097 Rotavirus G9 NC_011504 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. EF033203,EF059924, 10 EF033202,EF033204 Rotavirus G9 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU753964 Rotavirus G9 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 EF059923 Rotavirus NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX411969 RVA/G1/Human/India/UK- HLD/2011/H14 Rotavirus NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX411970 RVA/G1/Human/India/UK- HLD/2011/H180 Rotavirus NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX411968 RVA/G9/Human/India/UK- HLD/2011/H140 Rotavirus str,US1205 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF060487 Rotavirus strain TUCH NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AY594670 Rotavirus strain TUCH NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AY596189 Rotavirus subgroup 1 NC_011503 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 9 K02028,L11605 Rotavirus subgroup 1 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. K03384 10 Rotavirus subgroup 1 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. K03385 11 Rotavirus subgroup 1 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 DQ0325 Rotavirus subgroup 2 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 X57944 Rotavirus subgroup 2 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 K02033 Rotavirus subgroup 2 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. K02032 10 Rotavirus subgroup 2 NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 X57943,K02086 Rubella virus NC_001545 vertebrates,human 47 Togaviridae,Rubivirus,Rubella virus — AY258323,JN635281, JN635282,JN635292, JN635285,AF435866, JN635296,DQ085341 ,AB047329,AF435865 ,AB588193,DQ08534 0,L78917,JN635290, AB588188,AB047330 ,JN635293,JN635288 ,AB222608,JN635284 ,DQ388281,JN63529 1,JF727653,FJ21158 8,JN635287,AB22260 9,KF201674,AB58819 1,JN635295,JN63528 3,AB588192,JN63528 9,AF188704,AY25832 2,AB588189,JN63529 4,DQ388280,JF72765 4,DQ085342,AB5881 90,M15240,DQ08534 3,FJ211587,DQ08533 9,JN635286,DQ0853 38,DQ388279 SARS Coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY714217 CDC#200301157 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 25 Coronaviridae,Betacoronavirus,Severe acute — AY545914,JX163925, respiratory syndrome-related coronavirus AY545917,CS569493 ,C0918585,DQ89817 4,JX163923,C09185 84,CS079026,CS079 027,JX163924,JX163 926,AY545916,JX163 928,DQ497008,CS07 9029,JX163927,CS07 9028,CS254197,AY5 45918,C0918598,FJ9 59407,AY274119,AY 545919,AY545915 SARS coronavirus A022 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY686863 respiratory syndrome-related coronavirus SARS coronavirus AS NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY427439 respiratory syndrome-related coronavirus SARS coronavirus B039 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY686864 respiratory syndrome-related coronavirus SARS coronavirus BJQ1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278488 respiratory syndrome-related coronavirus SARS coronavirus BJQ2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278487 respiratory syndrome-related coronavirus SARS coronavirus BJQ3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278490 respiratory syndrome-related coronavirus SARS coronavirus BJQ4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY279354 respiratory syndrome-related coronavirus SARS coronavirus BJ162 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY864805 respiratory syndrome-related coronavirus SARS coronavirus BJ182- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371564 12 respiratory syndrome-related coronavirus SARS coronavirus BJ182-4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371562 respiratory syndrome-related coronavirus SARS coronavirus BJ182-8 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371563 respiratory syndrome-related coronavirus SARS coronavirus BJ182a NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371560 respiratory syndrome-related coronavirus SARS coronavirus BJ182b NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371561 respiratory syndrome-related coronavirus SARS coronavirus BJ202 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY864806 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY345986 AGO1 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY345987 AGO2 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY345988 AGO3 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY282752 Sul 0 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278554 W1 respiratory syndrome-related coronavirus SARS coronavirus ExoN1 NC_004718 vertebrates,human 33 Coronaviridae,Betacoronavirus,Severe acute — FJ882956,KF514395, respiratory syndrome-related coronavirus KF514410,FJ882950, FJ882931,KF514412, KF514406,KF514403, FJ882955,KF514401, KF514416,KF514391, FJ882940,KF514417, KF514420,KF514393, KF514389,KF514405, KF514390,KF514402, FJ882926,KF514411, FJ882928,FJ882930, KF514414,FJ882941, FJ882944,KF514407, FJ882954,FJ882960, JF292922,JX162087, FJ882929 SARS coronavirus FRA NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY310120 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 2 Coronaviridae,Betacoronavirus,Severe acute — AB257344,AY291315 Frankfurt 1 respiratory syndrome-related coronavirus SARS coronavirus GDQ1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278489 respiratory syndrome-related coronavirus SARS coronavirus GD69 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY313906 respiratory syndrome-related coronavirus SARS coronavirus GDH- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ640652 BJHO1 respiratory syndrome-related coronavirus SARS coronavirus GZ-A NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394977 respiratory syndrome-related coronavirus SARS coronavirus GZ-B NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394978 respiratory syndrome-related coronavirus SARS coronavirus GZ-C NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394979 respiratory syndrome-related coronavirus SARS coronavirus GZ-D NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394980 respiratory syndrome-related coronavirus SARS coronavirus GZO2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY390556 respiratory syndrome-related coronavirus SARS coronavirus GZ0401 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY568539 respiratory syndrome-related coronavirus SARS coronavirus GZ0402 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY613947 respiratory syndrome-related coronavirus SARS coronavirus GZ50 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY304495 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY515512 HC/SZ/61/03 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394981 HGZ8L1-A respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394982 HGZ8L1-B respiratory syndrome-related coronavirus SARS coronavirus HGZ8L2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394993 respiratory syndrome-related coronavirus SARS coronavirus HKU- NC_004718 vertebrates,human 6 Coronaviridae,Betacoronavirus,Severe acute — JQ316196,JN854286, 39849 respiratory syndrome-related coronavirus GU553365,AY278491 ,GU553363,GU55336 4 SARS coronavirus HSR 1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY323977 respiratory syndrome-related coronavirus SARS coronavirus HSZ-A NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394984 respiratory syndrome-related coronavirus SARS coronavirus HSZ-Bb NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394985 respiratory syndrome-related coronavirus SARS coronavirus HSZ-Bc NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394994 respiratory syndrome-related coronavirus SARS coronavirus HSZ-Cb NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394986 respiratory syndrome-related coronavirus SARS coronavirus HSZ-Cc NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394995 respiratory syndrome-related coronavirus SARS coronavirus HSZ2-A NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394983 respiratory syndrome-related coronavirus SARS coronavirus HZS2- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395004 Bb respiratory syndrome-related coronavirus SARS coronavirus HZS2-C NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394992 respiratory syndrome-related coronavirus SARS coronavirus HZS2-D NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394989 respiratory syndrome-related coronavirus SARS coronavirus HZS2-E NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394990 respiratory syndrome-related coronavirus SARS coronavirus HZS2- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394987 Fb respiratory syndrome-related coronavirus SARS coronavirus HZS2- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394991 Fc respiratory syndrome-related coronavirus SARS coronavirus JMD NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394988 respiratory syndrome-related coronavirus SARS coronavirus LC1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394998 respiratory syndrome-related coronavirus SARS coronavirus LC2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394999 respiratory syndrome-related coronavirus SARS coronavirus LC3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395000 respiratory syndrome-related coronavirus SARS coronavirus LC4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395001 respiratory syndrome-related coronavirus SARS coronavirus LC5 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395002 respiratory syndrome-related coronavirus SARS coronavirus LU- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY595412 2004 respiratory syndrome-related coronavirus SARS coronavirus MA15 NC_004718 vertebrates,human 26 Coronaviridae,Betacoronavirus,Severe acute — FJ882958,JF292910, respiratory syndrome-related coronavirus FJ882961,JF292912, FJ882948,JF292914, JF292911,JF292908, FJ882952,JF292915, JF292918,HQ890546, HQ890542,JF292917, FJ882945,JF292913, HQ890543,HQ89054 4,HQ890545,HQ8905 41,JF292916,JF2929 19,JF292909,JF2929 07,FJ882957,JF2929 20 SARS coronavirus MA15 NC_004718 vertebrates,human 26 Coronaviridae,Betacoronavirus,Severe acute — FJ882953,HQ890539, ExoN1 respiratory syndrome-related coronavirus JF292904,FJ882942, HQ890527,HQ89052 9,HQ890538,HQ8905 36,HQ890540,JF2929 03,HQ890526,HQ890 537,FJ882959,FJ882 943,FJ882951,HQ890 530,HQ890535,JF292 902,HQ890532,HQ89 0533,HQ890531,HQ8 90534,HQ890528,JF2 92906,JF292905,FJ8 82962 SARS coronavirus NS-1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY508724 respiratory syndrome-related coronavirus SARS coronavirus P2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — FJ882963 respiratory syndrome-related coronavirus SARS coronavirus PC4-13 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY613948 respiratory syndrome-related coronavirus SARS coronavirus PC4- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY613949 136 respiratory syndrome-related coronavirus SARS coronavirus PC4- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY613950 227 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY350750 PUMC01 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY357075 PUMCO2 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY357076 PUMC03 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — FJ588686 Rs_672/2006 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY463059 ShanghaiQXC1 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY463060 ShanghaiQXC2 respiratory syndrome-related coronavirus SARS coronavirus Sin2500 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283794 respiratory syndrome-related coronavirus SARS coronavirus Sin2677 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283795 respiratory syndrome-related coronavirus SARS coronavirus Sin2679 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283796 respiratory syndrome-related coronavirus SARS coronavirus Sin2748 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283797 respiratory syndrome-related coronavirus SARS coronavirus Sin2774 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283798 respiratory syndrome-related coronavirus SARS coronavirus Sin3408 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559083 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559097 Sin3408L respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559087 Sin3725V respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559084 Sin3765V respiratory syndrome-related coronavirus SARS coronavirus Sin842 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559081 respiratory syndrome-related coronavirus SARS coronavirus Sin845 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559093 respiratory syndrome-related coronavirus SARS coronavirus Sin846 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559094 respiratory syndrome-related coronavirus SARS coronavirus Sin847 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559095 respiratory syndrome-related coronavirus SARS coronavirus Sin848 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559085 respiratory syndrome-related coronavirus SARS coronavirus Sin849 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559086 respiratory syndrome-related coronavirus SARS coronavirus Sin850 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559096 respiratory syndrome-related coronavirus SARS coronavirus Sin852 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559082 respiratory syndrome-related coronavirus SARS coronavirus SinP1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559088 respiratory syndrome-related coronavirus SARS coronavirus SinP2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559089 respiratory syndrome-related coronavirus SARS coronavirus SinP3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559090 respiratory syndrome-related coronavirus SARS coronavirus SinP4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559091 respiratory syndrome-related coronavirus SARS coronavirus SinP5 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559092 respiratory syndrome-related coronavirus SARS coronavirus Sino1- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY485277 11 respiratory syndrome-related coronavirus SARS coronavirus Sino3- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY485278 11 respiratory syndrome-related coronavirus SARS coronavirus SoD NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY461660 respiratory syndrome-related coronavirus SARS coronavirus TJF NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY654624 respiratory syndrome-related coronavirus SARS coronavirus TW1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY291451 respiratory syndrome-related coronavirus SARS coronavirus TW10 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502923 respiratory syndrome-related coronavirus SARS coronavirus TW11 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502924 respiratory syndrome-related coronavirus SARS coronavirus TW2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502925 respiratory syndrome-related coronavirus SARS coronavirus TW3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502926 respiratory syndrome-related coronavirus SARS coronavirus TW4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502927 respiratory syndrome-related coronavirus SARS coronavirus TW5 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502928 respiratory syndrome-related coronavirus SARS coronavirus TW6 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502929 respiratory syndrome-related coronavirus SARS coronavirus TW7 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502930 respiratory syndrome-related coronavirus SARS coronavirus TW8 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502931 respiratory syndrome-related coronavirus SARS coronavirus TW9 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502932 respiratory syndrome-related coronavirus SARS coronavirus TWC NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY321118 respiratory syndrome-related coronavirus SARS coronavirus TWC2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY362698 respiratory syndrome-related coronavirus SARS coronavirus TWC3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY362699 respiratory syndrome-related coronavirus SARS coronavirus TWH NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006557 respiratory syndrome-related coronavirus SARS coronavirus TWJ NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006558 respiratory syndrome-related coronavirus SARS coronavirus TWK NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006559 respiratory syndrome-related coronavirus SARS coronavirus TWS NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006560 respiratory syndrome-related coronavirus SARS coronavirus TWY NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006561 respiratory syndrome-related coronavirus SARS coronavirus Taiwan NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY338174 TC1 respiratory syndrome-related coronavirus SARS coronavirus Taiwan NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY338175 TC2 respiratory syndrome-related coronavirus SARS coronavirus Taiwan NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY348314 TC3 respiratory syndrome-related coronavirus SARS coronavirus Urbani NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278741 respiratory syndrome-related coronavirus SARS coronavirus W H20 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY772062 respiratory syndrome-related coronavirus SARS coronavirus W HU NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394850 respiratory syndrome-related coronavirus SARS coronavirus ZJO1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY297028 respiratory syndrome-related coronavirus SARS coronavirus ZJO2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371559 respiratory syndrome-related coronavirus SARS coronavirus ZJO301 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ182595 respiratory syndrome-related coronavirus SARS coronavirus ZMY 1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY351680 respiratory syndrome-related coronavirus SARS coronavirus ZS-A NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394997 respiratory syndrome-related coronavirus SARS coronavirus ZS-B NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394996 respiratory syndrome-related coronavirus SARS coronavirus ZS-C NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395003 respiratory syndrome-related coronavirus SARS coronavirus civet010 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY572035 respiratory syndrome-related coronavirus SARS coronavirus civet020 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY572038 respiratory syndrome-related coronavirus SARS coronavirus wtic-MB NC_004718 vertebrates,human 31 Coronaviridae,Betacoronavirus,Severe acute — KF514421,FJ882932, respiratory syndrome-related coronavirus FJ882937,KF514413, KF514400,KF514392, KF514399,JF292921, KF514415,FJ882927, KF514398,KF514408, KF514419,FJ882938, KF514423,FJ882934, KF514418,FJ882939, KF514396,KF514397, FJ882936,FJ882949, FJ882946,FJ882933, FJ882947,KF514394, KF514409,KF514422, KF514388,FJ882935, KF514404 Sabia virus NC_006313 vertebrates,human 3 Arenaviridae,Arenavirus,Sabia virus seg. L JN801475,AY358026, AY216506 Sabia virus NC_006317 vertebrates,human 2 Arenaviridae,Arenavirus,Sabia virus seg. S U41071,JN801474 Sapovirus Chanthaburi- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY646854 74/Thailand ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ058829 Ehime1107/2002/JP ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ125333 Hu/Angelholm/SW278/200 ,NC_01062 4/SE 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ125334 Hu/Angelholm/5W314/200 ,NC_01062 4/SE 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AJ249939 Hu/Bristo1/1998/UK ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AJ786349 Hu/Chiba/000671/1999/JP ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ366346 Hu/Ehime1596/1999/JP , NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ366344 Hu/Ehime475/2004/JP ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ366345 Hu/Ehime643/March ,NC_01062 2000/JP 4,NC_0062 69,NC_006 554 Sapovirus Hu/G I,2/BR- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AB614356 DF01/BRA/2009 ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — HM002617 Hu/GI/Sapporo/MT- ,NC_01062 2010/1982 4,NC_0062 69,NC_006 554 Sapovirus Mc114 NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY237422 ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus Mc2 NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY237419 ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus N21 NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY237423 ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NongKhai- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY646856 24/Thailand ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NongKhai- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY646853 50/Thailand ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus SaKaeo- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY646855 15/Thailand ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — KF204570 pig/Gansu/CH430/2012/CH ,NC_01062 N 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — FJ387164 pig/sav1/2008/CHN ,NC_01062 4,NC_0062 69,NC_006 554 Sapporo rat virus NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S M34881 Sapporo rat virus NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M M34882 Sapporo virus-Manchester NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — X86560 ,NC_01062 4,NC_0062 69,NC_006 554 Seal anellovirus NC_015212 vertebrates,human 1 Anelloviridae,Seal anellovirus — HQ287751 TFFN/USA/2006 TFFN/USA/2006 Sendai virus NC_001552 vertebrates,human 20 Paramyxoviridae,Respirovirus,Sendai virus — AB855653,AB005795 ,AB005796,AB06518 7,M69046,M30204,D 0219803,AB195967, AB855655,EF679198, AB275417,AB065188 ,AB855654,AB03965 8,AB195968,AB2754 16,M30203,AB06518 9,AB065186,M30202 Seoul virus NC_005236 vertebrates,human 13 Bunyaviridae,Hantavirus,Seoul virus seg. S AF406965,KC626089 ,JX853575,JX879769, JQ665912,HQ611980 ,AY006465,EF192308 ,AY766368,AY27379 1,JQ898106,JN37755 3,AY750171 Seoul virus NC_005237 vertebrates,human 11 Bunyaviridae,Hantavirus,Seoul virus seg. M D17593,D17592,547 716,JN377554,JQ665 888,JX853576,D1759 4,DQ159911,JX8797 68,AB027521,EF1172 48 Seoul virus NC_005238 vertebrates,human 5 Bunyaviridae,Hantavirus,Seoul virus seg. L JX879770,EF190551, X56492,JX853574,EF 581094 Seoul virus 5CSG NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AB618130 Seoul virus B-1 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M X53861 Seoul virus BjHDQ1 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AY627049 Seoul virus BjHDQ1 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M DQ133505 Seoul virus CSG5 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AB618112 Seoul virus Gou3-e5 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF288650 Seoul virus Hb8610 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288643 Seoul virus K24-e7 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288653 Seoul virus K24-e7 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF288652 Seoul virus K24-v2 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288655 Seoul virus K24-v2 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF288654 Seoulvirus Gou3 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF184988 Seoulvirus Gou3 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF145977 Seoulvirus HB55 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF035832 Seoulvirus IR461 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF329388 Seoulvirus IR461 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF458104 Seoulvirus L99 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288299 Seoulvirus L99 NC_005237 vertebrates,human 2 Bunyaviridae,Hantavirus,Seoul virus seg. M AF288298,AF035833 Seoulvirus L99 NC_005238 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. L AF288297 Seoulvirus R22 NC_005236 vertebrates,human 2 Bunyaviridae,Hantavirus,Seoul virus seg. S AF488707,AF288295 Seoulvirus tchoupitoulas NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF329389 Simian Agent 10 NC_001796 vertebrates,human 1 Paramyxoviridae,Respirovirus,Human — HM583801 parainfluenza virus 3 Simian adenovirus 27,1 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25909 adenovirus B Simian adenovirus 27,1 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25909 adenovirus B Simian adenovirus 27,2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25928 adenovirus B Simian adenovirus 27,2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25928 adenovirus B Simian adenovirus 28,1 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25914 adenovirus B Simian adenovirus 28,1 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25914 adenovirus B Simian adenovirus 28,2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25915 adenovirus B Simian adenovirus 28,2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25915 adenovirus B Simian adenovirus 29 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25916 adenovirus B Simian adenovirus 29 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25916 adenovirus B Simian adenovirus 31,1 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25906 adenovirus C Simian adenovirus 31,2 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25904 adenovirus C Simian adenovirus 32 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25911 adenovirus B Simian adenovirus 32 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25911 adenovirus B Simian adenovirus 33 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25908 adenovirus B Simian adenovirus 33 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25908 adenovirus B Simian adenovirus 34 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25905 adenovirus C Simian adenovirus 35,1 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25912 adenovirus B Simian adenovirus 35,1 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25912 adenovirus B Simian adenovirus 35,2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25910 adenovirus B Simian adenovirus 35,2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25910 adenovirus B Simian adenovirus 40,1 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25907 adenovirus C Simian adenovirus 40,2 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25926 adenovirus C Simian adenovirus 41,1 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25913 adenovirus B Simian adenovirus 41,1 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25913 adenovirus B Simian adenovirus 41,2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25927 adenovirus B Simian adenovirus 41,2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25927 adenovirus B Simian adenovirus 42,1 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25903 adenovirus C Simian adenovirus 42,2 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25902 adenovirus C Simian adenovirus 42,3 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25925 adenovirus C Simian adenovirus 43 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25900 adenovirus C Simian adenovirus 44 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25899 adenovirus C Simian adenovirus 45 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25901 adenovirus C Simian adenovirus 46 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25930 adenovirus B Simian adenovirus 46 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25930 adenovirus B Simian adenovirus 47 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25929 adenovirus B Simian adenovirus 47 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25929 adenovirus B Simian agents NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AF326751 Simian enterovirus 19 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AF326754 Simian enterovirus 43 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AF326761 Simian enterovirus 46 NC_001612 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus A — EF667343,AF326764 Simian rotavirus NC_011500 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus A seg. 5 AF290884,AF290883, AF290882,Z32535,AF 290881,FJ422135 Simian rotavirus NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 GU550506,FJ422137 Simian rotavirus NC_011502 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 8 X81426,FJ422138 Simian rotavirus NC_011503 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 9 X66158,V01546,V011 90,FJ422139 Simian rotavirus NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. FJ422140,L41247 10 Simian rotavirus NC_011505 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. AF306493,XQ7831,FJ 11 422141,M28347 Simian rotavirus NC_011506 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 2 AF474406,L33364,FJ 422132 Simian rotavirus NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ422131 Simian rotavirus NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ422133 Simian rotavirus NC_011509 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 6 L15384,FJ422136,L3 3365,XQ0421,M27824 Simian rotavirus NC_011510 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 4 M23188,FJ422134,D 4 16345,D16346,X1420 Simian rotavirus A strain NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 EF583007,EU636925 RRV Simian rotavirus A strain NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 EU636924,EF583006 RRV Simian rotavirus A strain NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 EU636926,EF583008 RRV Simian rotavirus A strain NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EF583009 RRV Simian rotavirus A strain NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ816612 TUCH Simian rotavirus A strain NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ816613 TUCH Simian rotavirus A strain NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ816614 TUCH Simian rotavirus A strain NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ816615 TUCH Simian rotavirus A strain NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ816616 TUCH 10 Simian rotavirus A strain NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ816617 TUCH 11 Simian rotavirus A strain NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 EF583011 TUCH Simian rotavirus A strain NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 EF583010 TUCH Simian rotavirus A strain NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 EF583012 TUCH Simian rotavirus A strain NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EF583013 TUCH Simian rotavirus A strain NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ816611 TUCH Simian rotavirus A/SA11 NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 X14914 Simian rotavirus A/SA11 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JQ2353 Simian rotavirus A/SA11 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 XQ0355 Simian rotavirus A/SA11 NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. AF087678,K01138 10 Simian rotavirus A/SA11 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 X16831 Simian rotavirus A/SA11 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 X16830 Simian rotavirus A/SA11 NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 X16062,X16387 Simian rotavirus A/SA11 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AY187029 Simian rotavirus A/SA11 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 Y00336 Simian rotavirus A/SA11- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 AY065843 C14 Simian rotavirus A/SA11-L2 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EF460843 Simian virus 40 NC_001669 vertebrates,human 35 Polyomaviridae,Polyomavirus,Simian virus 40 seg. 8 EF579662,EF579804, AY271816,EF579661, FN812745,AF155358, AF156105,AY120890, AF345345,JQ2400,AF 316141,EF579665,AF 345344,EF579663,AF 316140,EF579664,AF 156107,EF579659,AY 538779,EF579660,AF 180737,EF579667,AY 271817,AF156108,AF 332562,DQ660375,E F579658,EF579666,A F332699,DQ218418, EF579803,AF155359, AF316139,AF168994, AF038616 Simian virus 41 NC_006428 vertebrates,human 1 Paramyxoviridae,Rubulavirus,Simian virus 41 — X64275 Sin Nombre virus NC_005215 vertebrates,human 6 Bunyaviridae,Hantavirus,Sin Nombre virus seg. M JQ690283,JQ690280, JQ690279,JQ690284, L25783, L37903 Sin Nombre virus NC_005216 vertebrates,human 8 Bunyaviridae,Hantavirus,Sin Nombre virus seg. S L25784,JQ690281,JQ 690277,JQ690282,JQ 690278,JQ690276,AF 281851,L37904 Sin Nombre virus NC_005217 vertebrates,human 2 Bunyaviridae,Hantavirus,Sin Nombre virus seg. L L37902,L37901 Small anellovirus 2 NC_007014 vertebrates,human 1 Anelloviridae,Small anellovirus — AY622909 ,NC_00701 3 Snow Mountain virus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY134748 Southampton virus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — L07418 Sudan ebolavirus NC_006432 vertebrates,human 9 Filoviridae,Ebolavirus,Sudan ebolavirus — KC545391,EU338380 ,KC589025,KC24278 3,FJ968794,KC54539 0,AY729654,KC5453 89,KC545392 Sudan ebolavirus- NC_006432 vertebrates,human 1 Filoviridae,Ebolavirus,Sudan ebolavirus — JN638998 Nakisamata Swine hepatitis E virus NC_001434 vertebrates,human 26 Hepeviridae,Hepevirus,Hepatitis E virus — GU361892,FJ998008, GU188851,AB481228 ,EU723514,AY59419 9,GU119961,FJ61023 2,GU119960,KF1763 51,AB097811,AB073 912,AB481227,EU72 3512,EU676172,EU7 23515,AY115488,EU 723513,AF082843,D 0279091,FJ426403,F J426404,AB481229,J X855794,EU723516, AB481226 Swine vesicular disease NC_001472 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus B — AY429470,AF268065, virus D16364,X54521 Swine vesicular disease NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — DQ0435 virus (STRAIN H/3 '76) TT virus 51e1931 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712003 TT virus 51e1932 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712004 TT virus 51e1957 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM711976 TT virus 51e2057 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712030 TT virus 51e2058 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712031 TT virus 51e2061 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712033 TT virus 51e2065 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712034 TT virus 51e2072 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712032 TTV-Iike mini virus NC_020498 vertebrates,human 8 Anelloviridae,TTV-Iike mini virus — KF764702,JX134046, AB026930,JX134044, AB038628,AB038626 ,KF764701,JX134045 Tacaribe virus NC_004292 vertebrates,human 1 Arenaviridae,Arenavirus,Tacaribe virus seg. L JQ4340 Tacaribe virus NC_004293 vertebrates,human 1 Arenaviridae,Arenavirus,Tacaribe virus seg. S M20304 Tamiami virus NC_010701 vertebrates,human 3 Arenaviridae,Arenavirus,Tamiami virus seg. S AF512828,AF485263, EU486821 Tamiami virus NC_010702 vertebrates,human 2 Arenaviridae,Arenavirus,Tamiami virus seg. L AY924393,EU627614 Thottapalayam virus NC_010704 vertebrates,human 1 Bunyaviridae,Hantavirus,Thottapalayam virus seg. S AY526097 Thottapalayam virus NC_010707 vertebrates,human 2 Bunyaviridae,Hantavirus,Thottapalayam virus seg. L EU001330,DQ825770 Thottapalayam virus NC_010708 vertebrates,human 2 Bunyaviridae,Hantavirus,Thottapalayam virus seg. M EU001329,DQ825771 Tioman virus NC_004074 vertebrates,human 1 Paramyxoviridae,Rubulavirus,Tioman virus — AF298895 Torque teno canis virus NC_014071 vertebrates,human 3 Anelloviridae,Thetatorquevirus,Torque teno — AB076002,GU951508 canis virus ,HM855265 Torque teno douroucouli NC_014087 vertebrates,human 1 Anelloviridae,Zetatorquevirus,Torque teno — AB041961 virus douroucouli virus Torque teno felis virus NC_014072 vertebrates,human 3 Anelloviridae,Etatorquevirus,Torque teno felis — HM142589,HM14258 virus 8,AB076003 Torque teno midi virus 1 NC_009225 vertebrates,human 2 Anelloviridae,Gammatorquevirus,Torque teno — AB290918,AB290917 midi virus 1 Torque teno midi virus 2 NC_014093 vertebrates,human 1 Anelloviridae,Gammatorquevirus,Torque teno — AB290919 midi virus 2 Torque teno mini virus 1 NC_014097 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB026931 mini virus 1 Torque teno mini virus 2 NC_014086 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB038629 mini virus 2 Torque teno mini virus 3 NC_014088 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB038630 mini virus 3 Torque teno mini virus 4 NC_014090 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB041963 mini virus 4 Torque teno mini virus 5 NC_014089 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB041962 mini virus 5 Torque teno mini virus 6 NC_014095 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB026929 mini virus 6 Torque teno mini virus 7 NC_014082 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB038627 mini virus 7 Torque teno mini virus 8 NC_014068 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AF291073 mini virus 8 Torque teno mini virus 9 NC_002195 vertebrates,human 2 Anelloviridae,Betatorquevirus,Torque teno — AB038631,AB038625 mini virus 9 Torque teno sus virus 1 NC_014070 vertebrates,human 13 Anelloviridae,lotatorquevirus,Torque teno sus — HM633256,AB076001 virus 1a ,JF937662,JF937660, JF937661,HM633251 ,JN688927,AY823990 ,JF694117,HM63324 9,HM633245,HM6332 43,JF694116 Torque teno sus virus la NC_014070 vertebrates,human 3 Anelloviridae,lotatorquevirus,Torque teno sus — JX535326,JX535327, virus la JQ933527 Torque teno sus virus k2 NC_014092 vertebrates,human 1 Anelloviridae,Kappatorquevirus,Torque teno — AY823991 sus virus k2 Torque teno sus virus k2b NC_014092 vertebrates,human 3 Anelloviridae,Kappatorquevirus,Torque teno — JQ406846,JQ406844, sus virus k2 JQ406845 Torque teno tamarin virus NC_014085 vertebrates,human 1 Anelloviridae,Epsilontorquevirus,Torque teno — AB041960 tamarin virus Torque teno virus NC_014070 vertebrates,human 4 Anelloviridae,lotatorquevirus,Torque teno sus — GQ120664,GU45638 virus 1a 3,GU456384,GU1880 45 Torque teno virus NC_015783 vertebrates,human 114 Anelloviridae,Torque teno virus — AF351132,FR751478, AF247138,FR751507, FR751483,FR751485 ,FR751472,AJ620233 ,FR751470,AB02866 9,AB064603,FR7515 06,AF122915,FR7514 71,AB064597,FR751 463,AJ620216,FR751 495,AY823989,FR84 8325,AB054648,AF12 2916,AJ620228,AJ62 0212,FR848327,FR7 51479,FR751500,AF1 22914,AJ620224,FR7 51477,AJ620235,AB0 64599,FR751465,FR 751491,FR848323,F R751502,AB017610, FR751504,AB064606 ,AJ620218,FR751493 ,AJ620227,AF122917 ,AJ620231,FR751480 ,DQ003344,FR75147 5,AY823988,FR7514 69,AJ620219,AB0386 19,AF116842,FR7514 68,FR751490,FR751 501,AB064602,AJ620 221,AF298585,AJ620 226,AB038620,FR75 1503,FR751509,FR7 51481,AJ620214,FR7 51497,DQ003341,DO 003343,FR751476,AJ 620232,AJ620230,FR 751487,AJ620229,AB 064600,AF247137,AF 122921,FR751492,AF 122918,FR751508,AF 122920,FJ426280,FR 751484,AF122913,FR 751511,FR751489,F R751496,AJ620234,A F079173,FR751482,F R751494,AB064601, AB064596,AJ620223, AJ620225,FR751510, FR751486,AF129887, AJ620213,DQ003342 ,AJ620220,FR751473 ,FR848324,AJ620222 ,FR751505,FR75146 6,FR848326,FR7514 74,AB064604,FR751 498,FR751467,AJ620 215,AJ620217,FR751 464,FR751488,FR75 1499 Torque teno virus 1 NC_002076 vertebrates,human 2 Anelloviridae,Alphatorquevirus,Torque teno — AB041007,AB008394 virus 1 Torque teno virus 1 NC_014070 vertebrates,human 5 Anelloviridae,lotatorquevirus,Torque teno sus — GU570202,GU57019 virus 1a 8,GU570201,GU5701 99,GU570200 Torque teno virus 10 NC_014076 vertebrates,human 2 Anelloviridae,Alphatorquevirus,Torque teno — AB064607,GU797360 virus 10 Torque teno virus 12 NC_014075 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB064605 virus 12 Torque teno virus 14 NC_014077 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB037926 virus 14 Torque teno virus 15 NC_014096 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB028668 virus 15 Torque teno virus 16 NC_014091 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB017613 virus 16 Torque teno virus 19 NC_014078 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB025946 virus 19 Torque teno virus 2 NC_014480 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB049608 virus 2 Torque teno virus 25 NC_014083 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB041959 virus 25 Torque teno virus 26 NC_014079 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB041958 virus 26 Torque teno virus 27 NC_014074 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB064595 virus 27 Torque teno virus 28 NC_014073 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB064598 virus 28 Torque teno virus 3 NC_014081 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AY666122 virus 3 Torque teno virus 4 NC_014069 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB041957 virus 4 Torque teno virus 6 NC_014094 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AF435014 virus 6 Torque teno virus 7 NC_014080 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AF261761 virus 7 Torque teno virus 8 NC_014084 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB054647 virus 8 Torque teno zalophus virus NC_012126 vertebrates,human 1 Anelloviridae,Lambdatorquevirus,Torque teno — FJ459582 1 zalophus virus 1 Tula virus NC_005226 vertebrates,human 1 Bunyaviridae,Hantavirus,Tula virus seg. L AJQ05637 Tula virus NC_005227 vertebrates,human 18 Bunyaviridae,Hantavirus,Tula virus seg. S AM945877,Z30945,A J223600,AF164093,Z 30942,AF017659,Z30 943,Z30944,Y13980, AF164094,AJ223601, AF442621,Z48573,Y1 3979,Z30941,Z48741, Z48574,Z49915 Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490334 human/Victoria/CK00026/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490332 human/Victoria/CK00026/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490333 human/Victoria/CK00026/2 005/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490338 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490342 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490337 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490341 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490340 human/Victoria/CK00027/2 10 054/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490339 human/Victoria/CK00027/2 11 054/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490345 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490336 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490346 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490343 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490344 human/Victoria/CK00027/2 054/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490357 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490352 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490348 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490351 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490350 human/Victoria/CK00028/2 10 005/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490349 human/Victoria/CK00028/2 11 005/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490356 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490347 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490355 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490353 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490354 human/Victoria/CK00028/2 005/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490360 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490363 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490359 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490368 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490362 human/Victoria/CK00029/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490361 human/Victoria/CK00029/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490367 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490358 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490366 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490364 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490365 human/Victoria/CK00029/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490371 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490375 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490370 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490374 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490373 human/Victoria/CK00030/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490372 human/Victoria/CK00030/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490379 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490369 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490377 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490376 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490378 human/Victoria/CK00030/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490382 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490386 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490381 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490385 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490384 human/Victoria/CK00032/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490383 human/Victoria/CK00032/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490390 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490380 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490389 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490387 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490388 human/Victoria/CK00032/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490393 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490397 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490392 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490396 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490395 human/Victoria/CK00033/2 10 007/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490394 human/Victoria/CK00033/2 11 007/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490401 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490391 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490400 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490398 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490399 human/Victoria/CK00033/2 007/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490410 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490407 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490403 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490406 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490405 human/Victoria/CK00034/2 10 007/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490404 human/Victoria/CK00034/2 11 007/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490412 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490402 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490411 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490408 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490409 human/Victoria/CK00034/2 007/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490415 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490419 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490414 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490418 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490417 human/Victoria/CK00035/2 10 005/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490416 human/Victoria/CK00035/2 11 005/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490423 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490413 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490422 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490420 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490421 human/Victoria/CK00035/2 005/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490434 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490429 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490425 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490428 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490427 human/Victoria/CK00036/2 10 005/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490426 human/Victoria/CK00036/2 11 005/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490433 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490424 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490432 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490430 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490431 human/Victoria/CK00036/2 005/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490443 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490439 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490436 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490444 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490438 human/Victoria/CK00037/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490437 human/Victoria/CK00037/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490445 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490435 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490442 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490440 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490441 human/Victoria/CK00037/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490448 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490452 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490447 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490451 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490450 human/Victoria/CK00039/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490449 human/Victoria/CK00039/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490456 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490446 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490455 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490453 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490454 human/Victoria/CK00039/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490459 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490463 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490458 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490462 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490461 human/Victoria/CK00040/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490460 human/Victoria/CK00040/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490467 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490457 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490466 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490464 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490465 human/Victoria/CK00040/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490470 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490474 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490469 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490473 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490472 human/Victoria/CK00041/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490471 human/Victoria/CK00041/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490478 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490468 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490477 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490475 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490476 human/Victoria/CK00041/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490481 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490485 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490480 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490484 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490483 human/Victoria/CK00043/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490482 human/Victoria/CK00043/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490489 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490479 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490488 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490486 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490487 human/Victoria/CK00043/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490495 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490499 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490494 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490498 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490497 human/Victoria/CK00045/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490496 human/Victoria/CK00045/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490493 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490490 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490492 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490500 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490491 human/Victoria/CK00045/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490503 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490507 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490502 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490506 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490505 human/Victoria/CK00046/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490504 human/Victoria/CK00046/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490511 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490501 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490510 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490508 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490509 human/Victoria/CK00046/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490514 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490518 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490513 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490517 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490516 human/Victoria/CK00047/2 10 006/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490515 human/Victoria/CK00047/2 11 006/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490522 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490512 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490521 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490519 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490520 human/Victoria/CK00047/2 006/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490525 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490529 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490524 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490528 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490527 human/Victoria/CK00048/2 10 004/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490526 human/Victoria/CK00048/2 11 004/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490533 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490523 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490532 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490530 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490531 human/Victoria/CK00048/2 004/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490536 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490540 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490535 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490539 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490538 human/Victoria/CK00049/2 10 004/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490537 human/Victoria/CK00049/2 11 004/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490544 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490534 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490542 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490541 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490543 human/Victoria/CK00049/2 004/G1P[8] Rotavirus A NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 JF490553 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JF490550 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JF490546 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JF490549 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490548 human/Victoria/CK00050/2 10 005/G1P[8] Rotavirus A NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. JF490547 human/Victoria/CK00050/2 11 005/G1P[8] Rotavirus A NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JF490555 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JF490545 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JF490552 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JF490551 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JF490554 human/Victoria/CK00050/2 005/G1P[8] Rotavirus A pheasant- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX204816 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX204818 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JX204812 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX204811 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX204813 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX204815 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A pheasant- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX204814 tc/GER/10V0112H5/2010/ G23P[37] Rotavirus A NC_011503 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 9 FN393054,FN393055 pheasant/HUN/2008 ,FN393056 Rotavirus A sable NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ495130 antelope/G6P[14] Rotavirus A sable NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ495134 antelope/G6P[14] Rotavirus A sable NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ495132 antelope/G6P[14] Rotavirus A sable NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ495133 antelope/G6P[14] Rotavirus A sable NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ495135 antelope/G6P[14] 10 Rotavirus A sable NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ495136 antelope/G6P[14] 11 Rotavirus A sable NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ495127 antelope/G6P[14] Rotavirus A sable NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ495126 antelope/G6P[14] Rotavirus A sable NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ495128 antelope/G6P[14] Rotavirus A sable NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ495131 antelope/G6P[14] Rotavirus A sable NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ495129 antelope/G6P[14] Rotavirus A strain 116E/AG NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ361205 Rotavirus A strain 116E/AG NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ361207 Rotavirus A strain 116E/AG NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ361208 Rotavirus A strain 116E/AG NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ361209 Rotavirus A strain 116E/AG NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ361210 10 Rotavirus A strain 116E/AG NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ361211 11 Rotavirus A strain 116E/AG NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 FJ361202 Rotavirus A strain 116E/AG NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ361201 Rotavirus A strain 116E/AG NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ361203 Rotavirus A strain 116E/AG NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 FJ361206 Rotavirus A strain 116E/AG NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ361204 Rotavirus A turkey- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 JX204827 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX204829 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 JX204823 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 JX204822 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 JX204824 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 JX204826 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus A turkey- NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 JX204825 tc/GER/03V0002E10/2003/ G22P[35] Rotavirus B NC_021541 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 1 M97203 Rotavirus B NC_021544 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. 6 AF079157 Rotavirus B NC_021549 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus B seg. AF079158 11 Rotavirus C NC_007543 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 6 AJ132203 Rotavirus C NC_007544 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 7 AJ132204 Rotavirus C NC_007545 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 9 AJ132205 Rotavirus C NC_007546 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 2 AJ303139 Rotavirus C NC_007547 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 1 AJ304859 Rotavirus C NC_007569 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. M81488 10 Rotavirus C NC_007570 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus C seg. 5 AF162434,M88768,E F528570,X59843 Rotavirus C NC_007571 vertebrates,human 15 Reoviridae,Rotavirus,Rotavirus C seg. 8 U20990,U20989,U20 994,U20991,U20993, X77257,U20992,X772 58,EF528571,X77256 ,AJ549087,U20996,U 20987,U20995,U2098 8 Rotavirus C NC_007572 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 3 X79442 Rotavirus C NC_007573 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. X83967 11 Rotavirus C NC_007574 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus C seg. 4 X96697 Rotavirus F NC_021625 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 1 JN596591 chicken/03V0568/DEU/2003 Rotavirus F NC_021626 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 2 JQ919995 chicken/03V0568/DEU/2003 Rotavirus F NC_021627 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 9 JQ919998 chicken/03V0568/DEU/2003 Rotavirus F NC_021628 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 8 JQ920000 chicken/03V0568/DEU/2003 Rotavirus F NC_021629 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. JQ920003 chicken/03V0568/DEU/2003 10 Rotavirus F NC_021630 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 4 JQ919996 chicken/03V0568/DEU/2003 Rotavirus F NC_021631 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 3 JQ919997 chicken/03V0568/DEU/2003 Rotavirus F NC_021632 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 5 JQ919999 chicken/03V0568/DEU/2003 Rotavirus F NC_021633 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 7 JQ920001 chicken/03V0568/DEU/2003 Rotavirus F NC_021634 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. JQ920002 chicken/03V0568/DEU/2003 11 Rotavirus F NC_021635 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus F seg. 6 HQ403603 chicken/03V0568/DEU/2003 Rotavirus G NC_021580 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920004 chicken/03V0567/DEU/2003 Rotavirus G NC_021581 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920006 chicken/03V0567/DEU/2003 Rotavirus G NC_021582 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920007 chicken/03V0567/DEU/2003 Rotavirus G NC_021583 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920008 chicken/03V0567/DEU/2003 Rotavirus G NC_021584 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920009 chicken/03V0567/DEU/2003 Rotavirus G NC_021585 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920010 chicken/03V0567/DEU/2003 Rotavirus G NC_021586 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920011 chicken/03V0567/DEU/2003 Rotavirus G NC_021587 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920012 chicken/03V0567/DEU/2003 Rotavirus G NC_021588 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — HQ403604 chicken/03V0567/DEU/2003 Rotavirus G NC_021589 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JQ920005 chicken/03V0567/DEU/2003 Rotavirus G NC_021590 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus G — JN596592 chicken/03V0567/DEU/2003 Rotavirus G1 NC_011503 vertebrates,human 11 Reoviridae,Rotavirus,Rotavirus A seg. 9 EU839916,EU839911 ,EU839909,EU83991 3,EU839912,EU8399 10,EU839915,EU839 908,EU839907,EU83 9906,EU839914 19 Rotavirus G1 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AY159645,AY159638 10 ,AY159631,AY15963 6,AY159632,AY1596 46,AY159633,AY159 642,AY159643,AY15 9634,AY159644,AY1 59641,AY159640,AY 159630,AY159637,A Y159639,AY159648, AY159635,AY159647 Rotavirus G10 NC_011503 vertebrates,human 7 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY816181,JF681943, AY843333,AY816182 ,AY855063,JF681941 ,AY843332 Rotavirus G10 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. AY855068 10 Rotavirus G12 NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 EU839967,EU839973 Rotavirus G12 NC_011502 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 8 EU839968,EU839974 Rotavirus G12 NC_011503 vertebrates,human 18 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB436818,AB436813 ,EU839943,EU83993 4,AB436814,EU8399 44,AB436815,EU839 942,EF059916,AB436 816,AB306271,AB43 6817,AB306270,EF05 9917,AB306268,EU8 39935,AB306269,AB 436819 Rotavirus G12 NC_011504 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. EU839969,EF059919 10 ,EU839975,EF05991 8 Rotavirus G12 NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. EU839970,EU839976 11 Rotavirus G12 NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU839965,EU839971 Rotavirus G12 NC_011510 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 4 EF059921,EF059920 Rotavirus G2 NC_011503 vertebrates,human 16 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY707784,EU839925 ,EU839919,EU83992 1,AY707785,EU8399 17,EU839926,EU839 918,EU839923,DQ47 8581,EU839924,EU8 39920,EU839922,EU 839928,AY707786,E U839927 Rotavirus G2 NC_011504 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. AY159649,AF401756, 10 EU839964 Rotavirus G2 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU839963 Rotavirus G3 NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 AY740735 Rotavirus G3 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 AY740734 Rotavirus G3 NC_011502 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 8 JQ358771,AY740733 Rotavirus G3 NC_011503 vertebrates,human 51 Reoviridae,Rotavirus,Rotavirus A seg. 9 EF495119,EF495124, AY707791,D86276,E F495121,EF495127,D 0904498,D86266,D8 6280,D86264,D86282 ,JQ358764,D86269,D 86265,AY707789,AY 707792,EF495122,D 0904499,DQ995488, DQ995489,D86283,D 0904503,EF495118, DQ904500,DQ90450 5,AY870661,DQ9045 06,EF495120,D86284 ,D86281,DQ904502, D86279,DQ904501,D 86271,DQ995490,D8 72,AY900173,AY707 794,EF495126,D8627 8,D86268,D86267,D8 6274,EF495123,AY74 0736,DQ904504,AY7 07793,EF495125,D86 275 Rotavirus G3 NC_011504 vertebrates,human 21 Reoviridae,Rotavirus,Rotavirus A seg. AB008240,AB008236 10 ,AB008234,AB00824 6,AB008230,AB0082 33,AB008237,AY740 732,AB008242,AB0O 8238,AB008243,AB0 08231,AB008244,AB 008232,AB008245,A B008248,AB008247, AB008241,AB008239 ,AB008229,AB00823 5 Rotavirus G3 NC_011505 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. JQ358774,AY740731 11 Rotavirus G3 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 AY740740 Rotavirus G3 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 AY740741 Rotavirus G3 NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 AY740739 Rotavirus G3 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AY740737 Rotavirus G3 NC_011510 vertebrates,human 20 Reoviridae,Rotavirus,Rotavirus A seg. 4 AY740738,AB008277 ,AB008279,AB00827 8,AB008290,AB0082 91,AB008282,AB0O8 289,AB008281,AB0O 8272,AB008273,AB0 08274,AB008285,AB 008275,AB008284,A B008286,AB008283, AB008280,AB008276 ,AB008288 Rotavirus G4 NC_011503 vertebrates,human 33 Reoviridae,Rotavirus,Rotavirus A seg. 9 AB012066,AB012074 ,AF161822,AB039035 ,AB012075,AB03902 6,AB039027,AB0120 71,AB039025,AB012 078,AF161821,AB039 029,AF161823,AB012 069,AF161817,AB012 065,AB012079,AB03 9028,AB012072,AF16 1818,AB039032,AB0 12077,AB012067,AB 012076,AB012073,A B039031,AB012068, AB012070,AF161820, AB039030,AF161819, AB039034,AB039033 Rotavirus G4 NC_011504 vertebrates,human 33 Reoviridae,Rotavirus,Rotavirus A seg. AB008255,AB008261 10 ,AF161810,AB043069 ,AF161815,AB043026 ,AB008251,AB00826 0,AB008253,AB0082 62,AB008249,AF1618 11,AB043072,AB043 075,AF161813,AB0O8 258,AB043076,AF161 816,AB008259,AB0O 8252,AB008263,AB0 43077,AB008256,AB 043073,AB043070,A B043078,AB043074, AF161814,AB008250, AB043071,AB008257 ,AB008254,AF161812 Rotavirus G6 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF532202 Rotavirus G8 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY855064 Rotavirus G8 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AF045228 Rotavirus G9 NC_011503 vertebrates,human 156 Reoviridae,Rotavirus,Rotavirus A seg. 9 AY253834,AJ250544, AB436831,AJ250276, EF199728,AB436820, AY699298,AB436832 ,AY262748,AY69930 2,AY307092,AY3070 88,AY307094,AB436 833,AY866500,AY87 9296,AY699301,EF19 9729,AY253835,AY6 99291,FJ695604,EF1 99735,AJ250275,AY2 11065,AJ250270,EU8 39936,AJ250269,DQ 647423,EU839929,E U839939,EF199736, AB436821,DQ056298 ,AY699292,AB09175 2,EF532837,AY69929 0,AB436822,EF19973 8,AB091755,EU8399 37,AY262747,AY211 067,AJ250268,AB364 369,EU839933,AY25 3836,AB436834,AJ25 0274,EU839932,AY6 99293,DQ056299,AJ 250277,DQ056300,E F199737,HQ018933,J F703095,DQ096290, AY695811,AY211068 ,HQ018932,AY25383 3,AY866504,EU8399 40,AY699294,AJ4911 79,DQ056297,EF199 730,AB091750,AJ491 177,AB436826,DQ05 6296,AY699297,AJ25 0272,EU839930,AB0 91751,JF703094,DQO 96288,EF199732,EF1 99726,AB091748,EF1 99734,AY253838,DQ 990318,AY262746,A Y253839,EF687001,E U839938,AY699296, AY184813,AY307087 ,AB436824,AJ491184 ,AY699299,AB36438 0,AB045372,DQ0962 93,EF199727,AJ2502 73,EF059922,DQ096 292,AB436835,AY30 7086,AB436830,AB0 91754,AY307093,DQ 096289,AY699304,A Y695809,AB091749, AY262749,EF199725, AB091756,DQ990319 ,AY307091,AJ491175 ,AY866502,AB43682 7,AB436825,AB0453 73,HQ018934,DQ096 294,AY699303,DQ99 0317,DQ096291,AB4 36829,AY866505,AY 253837,EU753963,A B436823,AY866501, AY866503,AB091747 ,EU839941,EF19973 1,AB436828,AY3070 85,JF703096,AB0917 53,AF359358,AJ2505 40,AY307090,DQ490 173,EF199733,AB091 746,AY816184,AB04 5374,AJ250271,EU83 9931,AJ491172,AJ25 0545,AY699300,AY3 07089,AY699295,AY 211066,JF703097 Rotavirus G9 NC_011504 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. EF033203,EF059924, 10 EF033202,EF033204 Rotavirus G9 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EU753964 Rotavirus G9 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 EF059923 Rotavirus NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX411969 RVA/G1/Human/India/UK- HLD/2011/H14 Rotavirus NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX411970 RVA/G1/Human/India/UK- HLD/2011/H180 Rotavirus NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 JX411968 RVA/G9/Human/India/UK- HLD/2011/H140 Rotavirus str,US1205 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 AF060487 Rotavirus strain TUCH NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AY594670 Rotavirus strain TUCH NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 AY596189 Rotavirus subgroup 1 NC_011503 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 9 K02028,L11605 Rotavirus subgroup 1 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. K03384 10 Rotavirus subgroup 1 NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. K03385 11 Rotavirus subgroup 1 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 DQ0325 Rotavirus subgroup 2 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 X57944 Rotavirus subgroup 2 NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 K02033 Rotavirus subgroup 2 NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. K02032 10 Rotavirus subgroup 2 NC_011509 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 6 X57943,K02086 Rubella virus NC_001545 vertebrates,human 47 Togaviridae,Rubivirus,Rubella virus — AY258323,JN635281, JN635282,JN635292, JN635285,AF435866, JN635296,DQ085341 ,AB047329,AF435865 ,AB588193,DQ08534 0,L78917,JN635290, AB588188,AB047330 ,JN635293,JN635288 ,AB222608,JN635284 ,DQ388281,JN63529 1,JF727653,FJ21158 8,JN635287,AB22260 9,KF201674,AB58819 1,JN635295,JN63528 3,AB588192,JN63528 9,AF188704,AY25832 2,AB588189,JN63529 4,DQ388280,JF72765 4,DQ085342,AB5881 90,M15240,DQ08534 3,FJ211587,DQ08533 9,JN635286,DQ0853 38,DQ388279 SARS Coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY714217 CDC#200301157 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 25 Coronaviridae,Betacoronavirus,Severe acute — AY545914,JX163925, respiratory syndrome-related coronavirus AY545917,CS569493 ,C0918585,DQ89817 4,JX163923,C09185 84,CS079026,CS079 027,JX163924,JX163 926,AY545916,JX163 928,DQ497008,CS07 9029,JX163927,CS07 9028,CS254197,AY5 45918,C0918598,FJ9 59407,AY274119,AY 545919,AY545915 SARS coronavirus A022 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY686863 respiratory syndrome-related coronavirus SARS coronavirus AS NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY427439 respiratory syndrome-related coronavirus SARS coronavirus B039 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY686864 respiratory syndrome-related coronavirus SARS coronavirus BJQ1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278488 respiratory syndrome-related coronavirus SARS coronavirus BJQ2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278487 respiratory syndrome-related coronavirus SARS coronavirus BJQ3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278490 respiratory syndrome-related coronavirus SARS coronavirus BJQ4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY279354 respiratory syndrome-related coronavirus SARS coronavirus BJ162 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY864805 respiratory syndrome-related coronavirus SARS coronavirus BJ182- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371564 12 respiratory syndrome-related coronavirus SARS coronavirus BJ182-4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371562 respiratory syndrome-related coronavirus SARS coronavirus BJ182-8 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371563 respiratory syndrome-related coronavirus SARS coronavirus BJ182a NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371560 respiratory syndrome-related coronavirus SARS coronavirus BJ182b NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371561 respiratory syndrome-related coronavirus SARS coronavirus BJ202 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY864806 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY345986 AGO1 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY345987 AGO2 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY345988 AGO3 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY282752 Sul 0 respiratory syndrome-related coronavirus SARS coronavirus CUHK- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278554 W1 respiratory syndrome-related coronavirus SARS coronavirus ExoN1 NC_004718 vertebrates,human 33 Coronaviridae,Betacoronavirus,Severe acute — FJ882956,KF514395, respiratory syndrome-related coronavirus KF514410,FJ882950, FJ882931,KF514412, KF514406,KF514403, FJ882955,KF514401, KF514416,KF514391, FJ882940,KF514417, KF514420,KF514393, KF514389,KF514405, KF514390,KF514402, FJ882926,KF514411, FJ882928,FJ882930, KF514414,FJ882941, FJ882944,KF514407, FJ882954,FJ882960, JF292922,JX162087, FJ882929 SARS coronavirus FRA NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY310120 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 2 Coronaviridae,Betacoronavirus,Severe acute — AB257344,AY291315 Frankfurt 1 respiratory syndrome-related coronavirus SARS coronavirus GDQ1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278489 respiratory syndrome-related coronavirus SARS coronavirus GD69 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY313906 respiratory syndrome-related coronavirus SARS coronavirus GDH- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ640652 BJHO1 respiratory syndrome-related coronavirus SARS coronavirus GZ-A NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394977 respiratory syndrome-related coronavirus SARS coronavirus GZ-B NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394978 respiratory syndrome-related coronavirus SARS coronavirus GZ-C NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394979 respiratory syndrome-related coronavirus SARS coronavirus GZ-D NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394980 respiratory syndrome-related coronavirus SARS coronavirus GZO2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY390556 respiratory syndrome-related coronavirus SARS coronavirus GZ0401 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY568539 respiratory syndrome-related coronavirus SARS coronavirus GZ0402 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY613947 respiratory syndrome-related coronavirus SARS coronavirus GZ50 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY304495 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY515512 HC/SZ/61/03 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394981 HGZ8L1-A respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394982 HGZ8L1-B respiratory syndrome-related coronavirus SARS coronavirus HGZ8L2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394993 respiratory syndrome-related coronavirus SARS coronavirus HKU- NC_004718 vertebrates,human 6 Coronaviridae,Betacoronavirus,Severe acute — JQ316196,JN854286, 39849 respiratory syndrome-related coronavirus GU553365,AY278491 ,GU553363,GU55336 4 SARS coronavirus HSR 1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY323977 respiratory syndrome-related coronavirus SARS coronavirus HSZ-A NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394984 respiratory syndrome-related coronavirus SARS coronavirus HSZ-Bb NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394985 respiratory syndrome-related coronavirus SARS coronavirus HSZ-Bc NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394994 respiratory syndrome-related coronavirus SARS coronavirus HSZ-Cb NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394986 respiratory syndrome-related coronavirus SARS coronavirus HSZ-Cc NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394995 respiratory syndrome-related coronavirus SARS coronavirus HSZ2-A NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394983 respiratory syndrome-related coronavirus SARS coronavirus HZS2- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395004 Bb respiratory syndrome-related coronavirus SARS coronavirus HZS2-C NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394992 respiratory syndrome-related coronavirus SARS coronavirus HZS2-D NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394989 respiratory syndrome-related coronavirus SARS coronavirus HZS2-E NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394990 respiratory syndrome-related coronavirus SARS coronavirus HZS2- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394987 Fb respiratory syndrome-related coronavirus SARS coronavirus HZS2- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394991 Fc respiratory syndrome-related coronavirus SARS coronavirus JMD NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394988 respiratory syndrome-related coronavirus SARS coronavirus LC1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394998 respiratory syndrome-related coronavirus SARS coronavirus LC2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394999 respiratory syndrome-related coronavirus SARS coronavirus LC3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395000 respiratory syndrome-related coronavirus SARS coronavirus LC4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395001 respiratory syndrome-related coronavirus SARS coronavirus LC5 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395002 respiratory syndrome-related coronavirus SARS coronavirus LU- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY595412 2004 respiratory syndrome-related coronavirus SARS coronavirus MA15 NC_004718 vertebrates,human 26 Coronaviridae,Betacoronavirus,Severe acute — FJ882958,JF292910, respiratory syndrome-related coronavirus FJ882961,JF292912, FJ882948,JF292914, JF292911,JF292908, FJ882952,JF292915, JF292918,HQ890546, HQ890542,JF292917, FJ882945,JF292913, HQ890543,HQ89054 4,HQ890545,HQ8905 41,JF292916,JF2929 19,JF292909,JF2929 07,FJ882957,JF2929 20 SARS coronavirus MA15 NC_004718 vertebrates,human 26 Coronaviridae,Betacoronavirus,Severe acute — FJ882953,HQ890539, ExoN1 respiratory syndrome-related coronavirus JF292904,FJ882942, HQ890527,HQ89052 9,HQ890538,HQ8905 36,HQ890540,JF2929 03,HQ890526,HQ890 537,FJ882959,FJ882 943,FJ882951,HQ890 530,HQ890535,JF292 902,HQ890532,HQ89 0533,HQ890531,HQ8 90534,HQ890528,JF2 92906,JF292905,FJ8 82962 SARS coronavirus NS-1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY508724 respiratory syndrome-related coronavirus SARS coronavirus P2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — FJ882963 respiratory syndrome-related coronavirus SARS coronavirus PC4-13 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY613948 respiratory syndrome-related coronavirus SARS coronavirus PC4- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY613949 136 respiratory syndrome-related coronavirus SARS coronavirus PC4- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY613950 227 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY350750 PUMC01 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY357075 PUMCO2 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY357076 PUMC03 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — FJ588686 Rs_672/2006 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY463059 ShanghaiQXC1 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY463060 ShanghaiQXC2 respiratory syndrome-related coronavirus SARS coronavirus Sin2500 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283794 respiratory syndrome-related coronavirus SARS coronavirus Sin2677 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283795 respiratory syndrome-related coronavirus SARS coronavirus Sin2679 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283796 respiratory syndrome-related coronavirus SARS coronavirus Sin2748 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283797 respiratory syndrome-related coronavirus SARS coronavirus Sin2774 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY283798 respiratory syndrome-related coronavirus SARS coronavirus Sin3408 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559083 respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559097 Sin3408L respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559087 Sin3725V respiratory syndrome-related coronavirus SARS coronavirus NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559084 Sin3765V respiratory syndrome-related coronavirus SARS coronavirus Sin842 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559081 respiratory syndrome-related coronavirus SARS coronavirus Sin845 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559093 respiratory syndrome-related coronavirus SARS coronavirus Sin846 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559094 respiratory syndrome-related coronavirus SARS coronavirus Sin847 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559095 respiratory syndrome-related coronavirus SARS coronavirus Sin848 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559085 respiratory syndrome-related coronavirus SARS coronavirus Sin849 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559086 respiratory syndrome-related coronavirus SARS coronavirus Sin850 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559096 respiratory syndrome-related coronavirus SARS coronavirus Sin852 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559082 respiratory syndrome-related coronavirus SARS coronavirus SinP1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559088 respiratory syndrome-related coronavirus SARS coronavirus SinP2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559089 respiratory syndrome-related coronavirus SARS coronavirus SinP3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559090 respiratory syndrome-related coronavirus SARS coronavirus SinP4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559091 respiratory syndrome-related coronavirus SARS coronavirus SinP5 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY559092 respiratory syndrome-related coronavirus SARS coronavirus Sino1- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY485277 11 respiratory syndrome-related coronavirus SARS coronavirus Sino3- NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY485278 11 respiratory syndrome-related coronavirus SARS coronavirus SoD NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY461660 respiratory syndrome-related coronavirus SARS coronavirus TJF NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY654624 respiratory syndrome-related coronavirus SARS coronavirus TW1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY291451 respiratory syndrome-related coronavirus SARS coronavirus TW10 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502923 respiratory syndrome-related coronavirus SARS coronavirus TW11 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502924 respiratory syndrome-related coronavirus SARS coronavirus TW2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502925 respiratory syndrome-related coronavirus SARS coronavirus TW3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502926 respiratory syndrome-related coronavirus SARS coronavirus TW4 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502927 respiratory syndrome-related coronavirus SARS coronavirus TW5 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502928 respiratory syndrome-related coronavirus SARS coronavirus TW6 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502929 respiratory syndrome-related coronavirus SARS coronavirus TW7 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502930 respiratory syndrome-related coronavirus SARS coronavirus TW8 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502931 respiratory syndrome-related coronavirus SARS coronavirus TW9 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY502932 respiratory syndrome-related coronavirus SARS coronavirus TWC NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY321118 respiratory syndrome-related coronavirus SARS coronavirus TWC2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY362698 respiratory syndrome-related coronavirus SARS coronavirus TWC3 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY362699 respiratory syndrome-related coronavirus SARS coronavirus TWH NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006557 respiratory syndrome-related coronavirus SARS coronavirus TWJ NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006558 respiratory syndrome-related coronavirus SARS coronavirus TWK NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006559 respiratory syndrome-related coronavirus SARS coronavirus TWS NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006560 respiratory syndrome-related coronavirus SARS coronavirus TWY NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AP006561 respiratory syndrome-related coronavirus SARS coronavirus Taiwan NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY338174 TC1 respiratory syndrome-related coronavirus SARS coronavirus Taiwan NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY338175 TC2 respiratory syndrome-related coronavirus SARS coronavirus Taiwan NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY348314 TC3 respiratory syndrome-related coronavirus SARS coronavirus Urbani NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY278741 respiratory syndrome-related coronavirus SARS coronavirus W H20 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY772062 respiratory syndrome-related coronavirus SARS coronavirus W HU NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394850 respiratory syndrome-related coronavirus SARS coronavirus ZJO1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY297028 respiratory syndrome-related coronavirus SARS coronavirus ZJO2 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — EU371559 respiratory syndrome-related coronavirus SARS coronavirus ZJO301 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — DQ182595 respiratory syndrome-related coronavirus SARS coronavirus ZMY 1 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY351680 respiratory syndrome-related coronavirus SARS coronavirus ZS-A NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394997 respiratory syndrome-related coronavirus SARS coronavirus ZS-B NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY394996 respiratory syndrome-related coronavirus SARS coronavirus ZS-C NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY395003 respiratory syndrome-related coronavirus SARS coronavirus civet010 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY572035 respiratory syndrome-related coronavirus SARS coronavirus civet020 NC_004718 vertebrates,human 1 Coronaviridae,Betacoronavirus,Severe acute — AY572038 respiratory syndrome-related coronavirus SARS coronavirus wtic-MB NC_004718 vertebrates,human 31 Coronaviridae,Betacoronavirus,Severe acute — KF514421,FJ882932, respiratory syndrome-related coronavirus FJ882937,KF514413, KF514400,KF514392, KF514399,JF292921, KF514415,FJ882927, KF514398,KF514408, KF514419,FJ882938, KF514423,FJ882934, KF514418,FJ882939, KF514396,KF514397, FJ882936,FJ882949, FJ882946,FJ882933, FJ882947,KF514394, KF514409,KF514422, KF514388,FJ882935, KF514404 Sabia virus NC_006313 vertebrates,human 3 Arenaviridae,Arenavirus,Sabia virus seg. L JN801475,AY358026, AY216506 Sabia virus NC_006317 vertebrates,human 2 Arenaviridae,Arenavirus,Sabia virus seg. S U41071,JN801474 Sapovirus Chanthaburi- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY646854 74/Thailand ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ058829 Ehime1107/2002/JP ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ125333 Hu/Angelholm/SW278/200 ,NC_01062 an 4/SE 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ125334 Hu/Angelholm/5W314/200 ,NC_01062 4/SE 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AJ249939 Hu/Bristo1/1998/UK ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AJ786349 Hu/Chiba/000671/1999/JP ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ366346 Hu/Ehime1596/1999/JP , NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ366344 Hu/Ehime475/2004/JP ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — DQ366345 Hu/Ehime643/March ,NC_01062 2000/JP 4,NC_0062 69,NC_006 554 Sapovirus Hu/G I,2/BR- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AB614356 DF01/BRA/2009 ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — HM002617 Hu/GI/Sapporo/MT- ,NC_01062 2010/1982 4,NC_0062 69,NC_006 554 Sapovirus Mc114 NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY237422 ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus Mc2 NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY237419 ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus N21 NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY237423 ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NongKhai- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY646856 24/Thailand ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NongKhai- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY646853 50/Thailand ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus SaKaeo- NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — AY646855 15/Thailand ,NC_01062 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — KF204570 pig/Gansu/CH430/2012/CH ,NC_01062 N 4,NC_0062 69,NC_006 554 Sapovirus NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — FJ387164 pig/sav1/2008/CHN ,NC_01062 4,NC_0062 69,NC_006 554 Sapporo rat virus NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S M34881 Sapporo rat virus NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M M34882 Sapporo virus-Manchester NC_000940 vertebrates,human 1 Caliciviridae,Sapovirus,Sapporo virus — X86560 ,NC_01062 4,NC_0062 69,NC_006 554 Seal anellovirus NC_015212 vertebrates,human 1 Anelloviridae,Seal anellovirus — HQ287751 TFFN/USA/2006 TFFN/USA/2006 Sendai virus NC_001552 vertebrates,human 20 Paramyxoviridae,Respirovirus,Sendai virus — AB855653,AB005795 ,AB005796,AB06518 7,M69046,M30204,D 0219803,AB195967, AB855655,EF679198, AB275417,AB065188 ,AB855654,AB03965 8,AB195968,AB2754 16,M30203,AB06518 9,AB065186,M30202 Seoul virus NC_005236 vertebrates,human 13 Bunyaviridae,Hantavirus,Seoul virus seg. S AF406965,KC626089 ,JX853575,JX879769, JQ665912,HQ611980 ,AY006465,EF192308 ,AY766368,AY27379 1,JQ898106,JN37755 3,AY750171 Seoul virus NC_005237 vertebrates,human 11 Bunyaviridae,Hantavirus,Seoul virus seg. M D17593,D17592,547 716,JN377554,JQ665 888,JX853576,D1759 4,DQ159911,JX8797 68,AB027521,EF1172 48 Seoul virus NC_005238 vertebrates,human 5 Bunyaviridae,Hantavirus,Seoul virus seg. L JX879770,EF190551, X56492,JX853574,EF 581094 Seoul virus 5CSG NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AB618130 Seoul virus B-1 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M X53861 Seoul virus BjHDQ1 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AY627049 Seoul virus BjHDQ1 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M DQ133505 Seoul virus CSG5 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AB618112 Seoul virus Gou3-e5 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF288650 Seoul virus Hb8610 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288643 Seoul virus K24-e7 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288653 Seoul virus K24-e7 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF288652 Seoul virus K24-v2 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288655 Seoul virus K24-v2 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF288654 Seoulvirus Gou3 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF184988 Seoulvirus Gou3 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF145977 Seoulvirus HB55 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF035832 Seoulvirus IR461 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF329388 Seoulvirus IR461 NC_005237 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. M AF458104 Seoulvirus L99 NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF288299 Seoulvirus L99 NC_005237 vertebrates,human 2 Bunyaviridae,Hantavirus,Seoul virus seg. M AF288298,AF035833 Seoulvirus L99 NC_005238 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. L AF288297 Seoulvirus R22 NC_005236 vertebrates,human 2 Bunyaviridae,Hantavirus,Seoul virus seg. S AF488707,AF288295 Seoulvirus tchoupitoulas NC_005236 vertebrates,human 1 Bunyaviridae,Hantavirus,Seoul virus seg. S AF329389 Simian Agent 10 NC_001796 vertebrates,human 1 Paramyxoviridae,Respirovirus,Human — HM583801 parainfluenza virus 3 Simian adenovirus 27,1 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25909 adenovirus B Simian adenovirus 27,1 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25909 adenovirus B Simian adenovirus 27,2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25928 adenovirus B Simian adenovirus 27,2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25928 adenovirus B Simian adenovirus 28,1 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25914 adenovirus B Simian adenovirus 28,1 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25914 adenovirus B Simian adenovirus 28,2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25915 adenovirus B Simian adenovirus 28,2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25915 adenovirus B Simian adenovirus 29 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25916 adenovirus B Simian adenovirus 29 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25916 adenovirus B Simian adenovirus 31,1 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25906 adenovirus C Simian adenovirus 31,2 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25904 adenovirus C Simian adenovirus 32 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25911 adenovirus B Simian adenovirus 32 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25911 adenovirus B Simian adenovirus 33 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25908 adenovirus B Simian adenovirus 33 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25908 adenovirus B Simian adenovirus 34 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25905 adenovirus C Simian adenovirus 35,1 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25912 adenovirus B Simian adenovirus 35,1 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25912 adenovirus B Simian adenovirus 35,2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25910 adenovirus B Simian adenovirus 35,2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25910 adenovirus B Simian adenovirus 40,1 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25907 adenovirus C Simian adenovirus 40,2 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25926 adenovirus C Simian adenovirus 41,1 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25913 adenovirus B Simian adenovirus 41,1 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25913 adenovirus B Simian adenovirus 41,2 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25927 adenovirus B Simian adenovirus 41,2 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25927 adenovirus B Simian adenovirus 42,1 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25903 adenovirus C Simian adenovirus 42,2 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25902 adenovirus C Simian adenovirus 42,3 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25925 adenovirus C Simian adenovirus 43 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25900 adenovirus C Simian adenovirus 44 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25899 adenovirus C Simian adenovirus 45 NC_001405 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25901 adenovirus C Simian adenovirus 46 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25930 adenovirus B Simian adenovirus 46 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25930 adenovirus B Simian adenovirus 47 NC_011202 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25929 adenovirus B Simian adenovirus 47 NC_011203 vertebrates,human 1 Adenoviridae,Mastadenovirus,Human — FJQ25929 adenovirus B Simian agents NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — AF326751 Simian enterovirus 19 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AF326754 Simian enterovirus 43 NC_001612 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus A — AF326761 Simian enterovirus 46 NC_001612 vertebrates,human 2 Picornaviridae,Enterovirus,Enterovirus A — EF667343,AF326764 Simian rotavirus NC_011500 vertebrates,human 6 Reoviridae,Rotavirus,Rotavirus A seg. 5 AF290884,AF290883, AF290882,Z32535,AF 290881,FJ422135 Simian rotavirus NC_011501 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 7 GU550506,FJ422137 Simian rotavirus NC_011502 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 8 X81426,FJ422138 Simian rotavirus NC_011503 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. 9 X66158,V01546,V011 90,FJ422139 Simian rotavirus NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. FJ422140,L41247 10 Simian rotavirus NC_011505 vertebrates,human 4 Reoviridae,Rotavirus,Rotavirus A seg. AF306493,XQ7831,FJ 11 422141,M28347 Simian rotavirus NC_011506 vertebrates,human 3 Reoviridae,Rotavirus,Rotavirus A seg. 2 AF474406,L33364,FJ 422132 Simian rotavirus NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 FJ422131 Simian rotavirus NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 FJ422133 Simian rotavirus NC_011509 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 6 L15384,FJ422136,L3 3365,XQ0421,M27824 Simian rotavirus NC_011510 vertebrates,human 5 Reoviridae,Rotavirus,Rotavirus A seg. 4 M23188,FJ422134,D 4 16345,D16346,X1420 Simian rotavirus A strain NC_011506 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 2 EF583007,EU636925 RRV Simian rotavirus A strain NC_011507 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 1 EU636924,EF583006 RRV Simian rotavirus A strain NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 EU636926,EF583008 RRV Simian rotavirus A strain NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EF583009 RRV Simian rotavirus A strain NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 FJ816612 TUCH Simian rotavirus A strain NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 FJ816613 TUCH Simian rotavirus A strain NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 FJ816614 TUCH Simian rotavirus A strain NC_011503 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 9 FJ816615 TUCH Simian rotavirus A strain NC_011504 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ816616 TUCH 10 Simian rotavirus A strain NC_011505 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. FJ816617 TUCH 11 Simian rotavirus A strain NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 EF583011 TUCH Simian rotavirus A strain NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 EF583010 TUCH Simian rotavirus A strain NC_011508 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 3 EF583012 TUCH Simian rotavirus A strain NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 EF583013 TUCH Simian rotavirus A strain NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 FJ816611 TUCH Simian rotavirus A/SA11 NC_011500 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 5 X14914 Simian rotavirus A/SA11 NC_011501 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 7 JQ2353 Simian rotavirus A/SA11 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 XQ0355 Simian rotavirus A/SA11 NC_011504 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. AF087678,K01138 10 Simian rotavirus A/SA11 NC_011506 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 2 X16831 Simian rotavirus A/SA11 NC_011507 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 1 X16830 Simian rotavirus A/SA11 NC_011508 vertebrates,human 2 Reoviridae,Rotavirus,Rotavirus A seg. 3 X16062,X16387 Simian rotavirus A/SA11 NC_011509 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 6 AY187029 Simian rotavirus A/SA11 NC_011510 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 4 Y00336 Simian rotavirus A/SA11- NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 AY065843 C14 Simian rotavirus A/SA11-L2 NC_011502 vertebrates,human 1 Reoviridae,Rotavirus,Rotavirus A seg. 8 EF460843 Simian virus 40 NC_001669 vertebrates,human 35 Polyomaviridae,Polyomavirus,Simian virus 40 seg. 8 EF579662,EF579804, AY271816,EF579661, FN812745,AF155358, AF156105,AY120890, AF345345,JQ2400,AF 316141,EF579665,AF 345344,EF579663,AF 316140,EF579664,AF 156107,EF579659,AY 538779,EF579660,AF 180737,EF579667,AY 271817,AF156108,AF 332562,DQ660375,E F579658,EF579666,A F332699,DQ218418, EF579803,AF155359, AF316139,AF168994, AF038616 Simian virus 41 NC_006428 vertebrates,human 1 Paramyxoviridae,Rubulavirus,Simian virus 41 — X64275 Sin Nombre virus NC_005215 vertebrates,human 6 Bunyaviridae,Hantavirus,Sin Nombre virus seg. M JQ690283,JQ690280, JQ690279,JQ690284, L25783, L37903 Sin Nombre virus NC_005216 vertebrates,human 8 Bunyaviridae,Hantavirus,Sin Nombre virus seg. S L25784,JQ690281,JQ 690277,JQ690282,JQ 690278,JQ690276,AF 281851,L37904 Sin Nombre virus NC_005217 vertebrates,human 2 Bunyaviridae,Hantavirus,Sin Nombre virus seg. L L37902,L37901 Small anellovirus 2 NC_007014 vertebrates,human 1 Anelloviridae,Small anellovirus — AY622909 ,NC_00701 3 Snow Mountain virus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — AY134748 Southampton virus NC_001959 vertebrates,human 1 Caliciviridae,Norovirus,Norwalk virus — L07418 Sudan ebolavirus NC_006432 vertebrates,human 9 Filoviridae,Ebolavirus,Sudan ebolavirus — KC545391,EU338380 ,KC589025,KC24278 3,FJ968794,KC54539 0,AY729654,KC5453 89,KC545392 Sudan ebolavirus- NC_006432 vertebrates,human 1 Filoviridae,Ebolavirus,Sudan ebolavirus — JN638998 Nakisamata Swine hepatitis E virus NC_001434 vertebrates,human 26 Hepeviridae,Hepevirus,Hepatitis E virus — GU361892,FJ998008, GU188851,AB481228 ,EU723514,AY59419 9,GU119961,FJ61023 2,GU119960,KF1763 51,AB097811,AB073 912,AB481227,EU72 3512,EU676172,EU7 23515,AY115488,EU 723513,AF082843,D 0279091,FJ426403,F J426404,AB481229,J X855794,EU723516, AB481226 Swine vesicular disease NC_001472 vertebrates,human 4 Picornaviridae,Enterovirus,Enterovirus B — AY429470,AF268065, virus D16364,X54521 Swine vesicular disease NC_001472 vertebrates,human 1 Picornaviridae,Enterovirus,Enterovirus B — DQ0435 virus (STRAIN H/3 '76) TT virus 51e1931 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712003 TT virus 51e1932 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712004 TT virus 51e1957 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM711976 TT virus 51e2057 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712030 TT virus 51e2058 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712031 TT virus 51e2061 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712033 TT virus 51e2065 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712034 TT virus 51e2072 NC_015783 vertebrates,human 1 Anelloviridae,Torque teno virus — AM712032 TTV-Iike mini virus NC_020498 vertebrates,human 8 Anelloviridae,TTV-Iike mini virus — KF764702,JX134046, AB026930,JX134044, AB038628,AB038626 ,KF764701,JX134045 Tacaribe virus NC_004292 vertebrates,human 1 Arenaviridae,Arenavirus,Tacaribe virus seg. L JQ4340 Tacaribe virus NC_004293 vertebrates,human 1 Arenaviridae,Arenavirus,Tacaribe virus seg. S M20304 Tamiami virus NC_010701 vertebrates,human 3 Arenaviridae,Arenavirus,Tamiami virus seg. S AF512828,AF485263, EU486821 Tamiami virus NC_010702 vertebrates,human 2 Arenaviridae,Arenavirus,Tamiami virus seg. L AY924393,EU627614 Thottapalayam virus NC_010704 vertebrates,human 1 Bunyaviridae,Hantavirus,Thottapalayam virus seg. S AY526097 Thottapalayam virus NC_010707 vertebrates,human 2 Bunyaviridae,Hantavirus,Thottapalayam virus seg. L EU001330,DQ825770 Thottapalayam virus NC_010708 vertebrates,human 2 Bunyaviridae,Hantavirus,Thottapalayam virus seg. M EU001329,DQ825771 Tioman virus NC_004074 vertebrates,human 1 Paramyxoviridae,Rubulavirus,Tioman virus — AF298895 Torque teno canis virus NC_014071 vertebrates,human 3 Anelloviridae,Thetatorquevirus,Torque teno — AB076002,GU951508 canis virus ,HM855265 Torque teno douroucouli NC_014087 vertebrates,human 1 Anelloviridae,Zetatorquevirus,Torque teno — AB041961 virus douroucouli virus Torque teno felis virus NC_014072 vertebrates,human 3 Anelloviridae,Etatorquevirus,Torque teno felis — HM142589,HM14258 virus 8,AB076003 Torque teno midi virus 1 NC_009225 vertebrates,human 2 Anelloviridae,Gammatorquevirus,Torque teno — AB290918,AB290917 midi virus 1 Torque teno midi virus 2 NC_014093 vertebrates,human 1 Anelloviridae,Gammatorquevirus,Torque teno — AB290919 midi virus 2 Torque teno mini virus 1 NC_014097 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB026931 mini virus 1 Torque teno mini virus 2 NC_014086 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB038629 mini virus 2 Torque teno mini virus 3 NC_014088 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB038630 mini virus 3 Torque teno mini virus 4 NC_014090 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB041963 mini virus 4 Torque teno mini virus 5 NC_014089 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB041962 mini virus 5 Torque teno mini virus 6 NC_014095 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB026929 mini virus 6 Torque teno mini virus 7 NC_014082 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AB038627 mini virus 7 Torque teno mini virus 8 NC_014068 vertebrates,human 1 Anelloviridae,Betatorquevirus,Torque teno — AF291073 mini virus 8 Torque teno mini virus 9 NC_002195 vertebrates,human 2 Anelloviridae,Betatorquevirus,Torque teno — AB038631,AB038625 mini virus 9 Torque teno sus virus 1 NC_014070 vertebrates,human 13 Anelloviridae,lotatorquevirus,Torque teno sus — HM633256,AB076001 virus 1a ,JF937662,JF937660, JF937661,HM633251 ,JN688927,AY823990 ,JF694117,HM63324 9,HM633245,HM6332 43,JF694116 Torque teno sus virus la NC_014070 vertebrates,human 3 Anelloviridae,lotatorquevirus,Torque teno sus — JX535326,JX535327, virus la JQ933527 Torque teno sus virus k2 NC_014092 vertebrates,human 1 Anelloviridae,Kappatorquevirus,Torque teno — AY823991 sus virus k2 Torque teno sus virus k2b NC_014092 vertebrates,human 3 Anelloviridae,Kappatorquevirus,Torque teno — JQ406846,JQ406844, sus virus k2 JQ406845 Torque teno tamarin virus NC_014085 vertebrates,human 1 Anelloviridae,Epsilontorquevirus,Torque teno — AB041960 tamarin virus Torque teno virus NC_014070 vertebrates,human 4 Anelloviridae,lotatorquevirus,Torque teno sus — GQ120664,GU45638 virus la 3,GU456384,GU1880 45 Torque teno virus NC_015783 vertebrates,human 114 Anelloviridae,Torque teno virus — AF351132,FR751478, AF247138,FR751507, FR751483,FR751485 ,FR751472,AJ620233 ,FR751470,AB02866 9,AB064603,FR7515 06,AF122915,FR7514 71,AB064597,FR751 463,AJ620216,FR751 495,AY823989,FR84 8325,AB054648,AF12 2916,AJ620228,AJ62 0212,FR848327,FR7 51479,FR751500,AF1 22914,AJ620224,FR7 51477,AJ620235,AB0 64599,FR751465,FR 751491,FR848323,F R751502,AB017610, FR751504,AB064606 ,AJ620218,FR751493 ,AJ620227,AF122917 ,AJ620231,FR751480 ,DQ003344,FR75147 5,AY823988,FR7514 69,AJ620219,AB0386 19,AF116842,FR7514 68,FR751490,FR751 501,AB064602,AJ620 221,AF298585,AJ620 226,AB038620,FR75 1503,FR751509,FR7 51481,AJ620214,FR7 51497,DQ003341,DO 003343,FR751476,AJ 620232,AJ620230,FR 751487,AJ620229,AB 064600,AF247137,AF 122921,FR751492,AF 122918,FR751508,AF 122920,FJ426280,FR 751484,AF122913,FR 751511,FR751489,F R751496,AJ620234,A F079173,FR751482,F R751494,AB064601, AB064596,AJ620223, AJ620225,FR751510, FR751486,AF129887, AJ620213,DQ003342 ,AJ620220,FR751473 ,FR848324,AJ620222 ,FR751505,FR75146 6,FR848326,FR7514 74,AB064604,FR751 498,FR751467,AJ620 215,AJ620217,FR751 464,FR751488,FR75 1499 Torque teno virus 1 NC_002076 vertebrates,human 2 Anelloviridae,Alphatorquevirus,Torque teno — AB041007,AB008394 virus 1 Torque teno virus 1 NC_014070 vertebrates,human 5 Anelloviridae,lotatorquevirus,Torque teno sus — GU570202,GU57019 virus 1a 8,GU570201,GU5701 99,GU570200 Torque teno virus 10 NC_014076 vertebrates,human 2 Anelloviridae,Alphatorquevirus,Torque teno — AB064607,GU797360 virus 10 Torque teno virus 12 NC_014075 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB064605 virus 12 Torque teno virus 14 NC_014077 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB037926 virus 14 Torque teno virus 15 NC_014096 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB028668 virus 15 Torque teno virus 16 NC_014091 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB017613 virus 16 Torque teno virus 19 NC_014078 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB025946 virus 19 Torque teno virus 2 NC_014480 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB049608 virus 2 Torque teno virus 25 NC_014083 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB041959 virus 25 Torque teno virus 26 NC_014079 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB041958 virus 26 Torque teno virus 27 NC_014074 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB064595 virus 27 Torque teno virus 28 NC_014073 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB064598 virus 28 Torque teno virus 3 NC_014081 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AY666122 virus 3 Torque teno virus 4 NC_014069 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB041957 virus 4 Torque teno virus 6 NC_014094 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AF435014 virus 6 Torque teno virus 7 NC_014080 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AF261761 virus 7 Torque teno virus 8 NC_014084 vertebrates,human 1 Anelloviridae,Alphatorquevirus,Torque teno — AB054647 virus 8 Torque teno zalophus virus NC_012126 vertebrates,human 1 Anelloviridae,Lambdatorquevirus,Torque teno — FJ459582 1 zalophus virus 1 Tula virus NC_005226 vertebrates,human 1 Bunyaviridae,Hantavirus,Tula virus seg. L AJQ05637 Tula virus NC_005227 vertebrates,human 18 Bunyaviridae,Hantavirus,Tula virus seg. S AM945877,Z30945,A J223600,AF164093,Z 30942,AF017659,Z30 943,Z30944,Y13980, AF164094,AJ223601, AF442621,Z48573,Y1 3979,Z30941,Z48741, Z48574,Z49915 Bluetongue virus 1 NC_006014 vertebrates,invertebrates 11 Reoviridae,Orbivirus,Bluetongue virus seg. 3 DQ186807,JN848761 ,JN881987,DQ18682 2,DQ186811,AF5290 48,DQ186818,AF529 044,DQ186816,DQ18 6792,DQ186820 NC_006015 vertebrates,invertebrates 13 Reoviridae,Orbivirus,Bluetongue virus seg. AF512912,JX272388, 10 AF512911,JN848768, KJQ19214,KC879624, AF529057,FJ437561, JN881994,AF135223, AF529049,AF529052, AF512910 Bluetongue virus 1 NC_006022 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Bluetongue virus seg. 7 AY789967,AY776331 ,FJ437558,FJ437562, JN881991,JN848765 Bluetongue virus 1 NC_006023 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JN881985,JN848759 Bluetongue virus 1 NC_006024 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JN881988,JN848762 Bluetongue virus 1 NC_006025 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JN881989,AM778437 ,AM778438,JN84876 3 Bluetongue virus 10 NC_006007 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ740778 Bluetongue virus 10 NC_006010 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 6 JQ740776,AJ586709, JN704635 Bluetongue virus 10 NC_006013 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 2 AJ585131,JQ740772 Bluetongue virus 10 NC_006014 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 3 JQ740773 Bluetongue virus 10 NC_006015 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. JQ740780,JX272528 10 Bluetongue virus 10 NC_006022 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JQ740777 Bluetongue virus 10 NC_006023 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ740771 Bluetongue virus 10 NC_006024 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 4 L13726,JQ740774 Bluetongue virus 10 NC_006025 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JQ740775 Bluetongue virus 11 NC_006007 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ972838,JQ972858, JQ972868,JQ972848 Bluetongue virus 11 NC_006008 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JQ972869,JQ972859, JQ972849,JQ972839 Bluetongue virus 11 NC_006010 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. 6 JQ972866,JQ972856, JQ972846,JQ972836, AJ586710 Bluetongue virus 11 NC_006013 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. 2 AJ585132,JQ972832, JQ972862,JQ972852, JQ972842 Bluetongue virus 11 NC_006014 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. 3 L19968,JQ972833,JQ 972853,JQ972843,JQ 972863 Bluetongue virus 11 NC_006015 vertebrates,invertebrates 8 Reoviridae,Orbivirus,Bluetongue virus seg. JQ972870,AF512923, 10 JX272518,JQ972860, AF512921,JQ972850, JQ972840,AF512922 Bluetongue virus 11 NC_006022 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JQ972847,JQ972867, JQ972837,JQ972857 Bluetongue virus 11 NC_006023 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ972841,L20445,JQ 972831,JQ972851,JQ 972861 Bluetongue virus 11 NC_006024 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JQ972854,JQ972864, JQ972844,JQ972834, L08638 Bluetongue virus 11 NC_006025 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JQ972835,M97681,J 0972865,JQ972845,J 0972855 Bluetongue virus 12 NC_006010 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586711,AJ586712 Bluetongue virus 12 NC_006015 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. KC662621,JX272508, 10 AF135227 Bluetongue virus 13 NC_006007 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 8 AY855289 Bluetongue virus 13 NC_006010 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AY855280,AJ586713 Bluetongue virus 13 NC_006013 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 2 L11874,L11741 Bluetongue virus 13 NC_006014 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 3 L19969 Bluetongue virus 13 NC_006015 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. JX272498 10 Bluetongue virus 13 NC_006022 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 7 AY855283 Bluetongue virus 13 NC_006023 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 1 L20446,JX272489 Bluetongue virus 13 NC_006024 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 4 AY855274,L08640 Bluetongue virus 13 NC_006025 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 5 M97762 Bluetongue virus 14 NC_006010 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586714,AJ586715 Bluetongue virus 14 NC_006015 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. JX272488 10 Bluetongue virus 15 NC_006007 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ086228,AM900379 Bluetongue virus 15 NC_006008 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JQ086229 Bluetongue virus 15 NC_006010 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586716,AJ586717, AJ586718,JQ086226 Bluetongue virus 15 NC_006013 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 2 JQ086222 Bluetongue virus 15 NC_006014 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 3 JQ086223 Bluetongue virus 15 NC_006015 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. AF135228,JX272478, 10 JQ086230 Bluetongue virus 15 NC_006022 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 7 Li1724,JQ086227 Bluetongue virus 15 NC_006023 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ086221 Bluetongue virus 15 NC_006024 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JQ086224 Bluetongue virus 15 NC_006025 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JQ086225 Bluetongue virus 16 NC_006007 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ086238,AM900386 ,JQ924827 Bluetongue virus 16 NC_006008 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JQ086239,JQ924828 Bluetongue virus 16 NC_006010 vertebrates,invertebrates 10 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586693,AJ586691, AJ586692,AJ586689, JQ924825,AJ586694, JN572918,AJ586690, AJ586719,JQ086236 Bluetongue virus 16 NC_006013 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. 2 JQ086232,DQ191260 ,JQ924821,DQ19125 9 Bluetongue virus 16 NC_006014 vertebrates,invertebrates 11 Reoviridae,Orbivirus,Bluetongue virus seg. 3 DQ186821,DQ18679 8, DQ186828,DQ1868 27, DQ186812,DQ186 814,DQ186819,JQ08 6233,JQ924822,DQ1 86796,DQ186791 Bluetongue virus 16 NC_006015 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. JQ924829,JX272468, 10 KF387530,AF135229, JQ086240 Bluetongue virus 16 NC_006022 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JQ086237,JQ924826 Bluetongue virus 16 NC_006023 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ086231,JQ924820 Bluetongue virus 16 NC_006024 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JQ924823,JQ086234 Bluetongue virus 16 NC_006025 vertebrates,invertebrates 8 Reoviridae,Orbivirus,Bluetongue virus seg. 5 AM773694,JQ086235 ,AM773692,AM77369 6,JQ924824,AM7736 95,KF387525,AM773 693 Bluetongue virus 17 NC_006007 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 8 AY855290 Bluetongue virus 17 NC_006010 vertebrates,invertebrates 8 Reoviridae,Orbivirus,Bluetongue virus seg. 6 DQ080914,AJ586720 ,DQ080913,AY85528 1,DQ080912,DQ0809 10,DQ080911,DQ080 915 Bluetongue virus 17 NC_006013 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 2 AJ585138,AY855269, S72158 Bluetongue virus 17 NC_006015 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. JX272458 10 Bluetongue virus 17 NC_006022 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 7 AY855284 Bluetongue virus 17 NC_006023 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 1 L20447 Bluetongue virus 17 NC_006024 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 4 L08639,AY855275 Bluetongue virus 18 NC_006010 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586721 Bluetongue virus 18 NC_006015 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. JX272448,AF512915, 10 AF512914 Bluetongue virus 18 NC_006022 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 7 AY606206 10 Bluetongue virus 2 NC_006007 vertebrates,invertebrates 12 Reoviridae,Orbivirus,Bluetongue virus seg. 8 AM900382,AY855288 ,AY138896,JN255879 ,JN255869,JQ086248 ,JN255939,AY855286 ,JN255929,AY855287 ,AY855285,JQ240328 Bluetongue virus 2 NC_006008 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JN255880,JN255930, JN255870,JQ086249, JN255940,JQ713562 Bluetongue virus 2 NC_006010 vertebrates,invertebrates 27 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AY129084,AY855277 ,AY855279,AJ586674 ,JN255877,JN255927 ,AJ586673,AJ586669, AJ586666,AJ586665, JN255937,AY129083, AJ586671,AJ586668, AJ586675,JN255867, AJ586672,JQ086246, AJ783906,AY189951, JQ240326,AJ586670, AJ586696,AY855276, AJ586667,AJ783904, AY855278 Bluetongue virus 2 NC_006013 vertebrates,invertebrates 23 Reoviridae,Orbivirus,Bluetongue virus seg. 2 DQ191275,JN255873 ,DQ191273,JN25592 3,DQ191272,DQ1912 70, M21946,JQ08624 2,JN255933,DQ1912 66,DQ191263,AF481 096,DQ191267,DQ19 1274,DQ191261,DQ1 91265,AF356601,DQ 191264,DQ191271,D 0191268,DQ191262, JN255863,DQ191269 Bluetongue virus 2 NC_006014 vertebrates,invertebrates 11 Reoviridae,Orbivirus,Bluetongue virus seg. 3 L19967,JN255864,D 0186826,JN255934,J N255924,JQ086243, DQ186815,JN255874 ,JQ713558,DQ18679 3,S78452 Bluetongue virus 2 NC_006015 vertebrates,invertebrates 15 Reoviridae,Orbivirus,Bluetongue virus seg. AF512913,JN255881, 10 AY438033,AF512916, AF481094,AF135224, JN255941,AF135230, JQ240330,JQ086250, JQ713563,JN255931, AF512920,JX272608, JN255871 Bluetongue virus 2 NC_006022 vertebrates,invertebrates 10 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JQ086247,M64997,D 0399837,JN255938,J N255868,JN255878,A Y855282,JN255928,J 0713561,AF481095 Bluetongue virus 2 NC_006023 vertebrates,invertebrates 8 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JN255872,JQ713557, JQ240321,JQ086241, L20508,JN255922,JN 255932,JN255862 Bluetongue virus 2 NC_006024 vertebrates,invertebrates 14 Reoviridae,Orbivirus,Bluetongue virus seg. 4 AY855272,AY134477 ,AY855271,L08637,J N255865,JN255875,J 0240324,AY855273,J N255925,JQ086244, AY855270,JQ713559, AY129085,JN255935 Bluetongue virus 2 NC_006025 vertebrates,invertebrates 15 Reoviridae,Orbivirus,Bluetongue virus seg. 5 AM773687,AY138895 ,AM773686,JQ24032 5,JQ086245,JQ71356 0,AM773689,M97680, AM773685,JN255866 ,JN255936,AM77368 4,JN255876,AM7736 88,JN255926 Bluetongue virus 20 NC_006007 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ086258,AM900380 Bluetongue virus 20 NC_006008 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JQ086259 Bluetongue virus 20 NC_006010 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586723,JQ086256 Bluetongue virus 20 NC_006013 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 2 JQ086252,AJ585141 Bluetongue virus 20 NC_006014 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 3 JQ086253 Bluetongue virus 20 NC_006015 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. AF529055,JQ086260, 10 AF529056,JX272428 Bluetongue virus 20 NC_006022 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JQ086257 Bluetongue virus 20 NC_006023 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ086251 Bluetongue virus 20 NC_006024 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JQ086254 Bluetongue virus 20 NC_006025 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JQ086255 Bluetongue virus 21 NC_006007 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ086268,AM900390 Bluetongue virus 21 NC_006008 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JQ086269 Bluetongue virus 21 NC_006010 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 6 JQ086266,AJ586724, JN572916 Bluetongue virus 21 NC_006013 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 2 JQ086262 Bluetongue virus 21 NC_006014 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 3 AF529046,AF529047, JQ086263 Bluetongue virus 21 NC_006015 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Bluetongue virus seg. AB473808,JQ086270, 10 AF529053,AF529054, AF529058,JX272418 Bluetongue virus 21 NC_006022 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 7 AB473807,JQ086267 Bluetongue virus 21 NC_006023 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ086261 Bluetongue virus 21 NC_006024 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JQ086264 Bluetongue virus 21 NC_006025 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JQ086265 Bluetongue virus 22 NC_006010 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586725,AJ586726 Bluetongue virus 22 NC_006015 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. JX272398 10 Bluetongue virus 23 NC_006007 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ771829,JQ086278, AM900387,AM90038 1 Bluetongue virus 23 NC_006008 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JQ086279,JQ771830 Bluetongue virus 23 NC_006010 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586729,AJ586728, JQ086276,AJ586727, AJ783907 Bluetongue virus 23 NC_006013 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 2 JQ086272,L46685 Bluetongue virus 23 NC_006014 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 3 JQ086273,JQ771825, DQ186810 Bluetongue virus 23 NC_006015 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. JX272408,AF529059, 10 JQ086280,AF529051, JQ771831 Bluetongue virus 23 NC_006022 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 7 AJ277802,JQ771828, JQ086277 Bluetongue virus 23 NC_006023 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ771823,JQ086271 Bluetongue virus 23 NC_006024 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JQ086274,JQ771826 Bluetongue virus 23 NC_006025 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JQ771827,JQ086275 Bluetongue virus 24 NC_006010 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586730 Bluetongue virus 24 NC_006013 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 2 AJ585145 Bluetongue virus 24 NC_006015 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. JX272378 10 Bluetongue virus 3 NC_006007 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ086288 Bluetongue virus 3 NC_006008 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JQ086289 Bluetongue virus 3 NC_006010 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586698,JQ086286, AJ586697 Bluetongue virus 3 NC_006013 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 2 JQ086282,L42168 Bluetongue virus 3 NC_006014 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 3 JQ086283,AF529045 Bluetongue virus 3 NC_006015 vertebrates,invertebrates 7 Reoviridae,Orbivirus,Bluetongue virus seg. AF135225,AF512917, 10 AF512918,JQ086290, AF529050,JX272598, AF512906 Bluetongue virus 3 NC_006022 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JQ086287 Bluetongue virus 3 NC_006023 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ086281 Bluetongue virus 3 NC_006024 vertebrates,invertebrates Reoviridae,Orbivirus,Bluetongue virus seg. 4 JQ086284 Bluetongue virus 3 NC_006025 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JQ086285 Bluetongue virus 4 NC_006007 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JN255889,JN255899, AM900373,JN255949 ,AM900372 Bluetongue virus 4 NC_006008 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JN255900,JN255950, JN255890 Bluetongue virus 4 NC_006010 vertebrates,invertebrates 13 Reoviridae,Orbivirus,Bluetongue virus seg. 6 JN255887,AJ586680, AJ586682,AJ586677, AJ586679,AJ586699, AJ783909,AJ586678, AJ783908,JN255947, AJ586676,AJ586681, JN255897 Bluetongue virus 4 NC_006013 vertebrates,invertebrates 11 Reoviridae,Orbivirus,Bluetongue virus seg. 2 EF434176,JN255943, DQ191276,JN255883 ,DQ191281,DQ19127 7,AJ585125,DQ1912 80,DQ191279,DQ191 278,JN255893 Bluetongue virus 4 NC_006014 vertebrates,invertebrates 17 Reoviridae,Orbivirus,Bluetongue virus seg. 3 JN255894,DQ186803 ,DQ186801,DQ18681 3,DQ186806,DQ1868 00,DQ186809,DQ186 794,DQ186804,DQ18 6799,DQ186824,DQ1 86825,DQ186802,DQ 186817,JN255884,D 0186823,JN255944 Bluetongue virus 4 NC_006015 vertebrates,invertebrates 11 Reoviridae,Orbivirus,Bluetongue virus seg. JN255901,AF512908, 10 JN255951,JX272588, JN255891,AJ783911, AF512907,AF512909, AJ783910,AF135226, AF512905 Bluetongue virus 4 NC_006022 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JN255898,JN255888, JN255948 Bluetongue virus 4 NC_006023 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JN255942,JN255882, JN255892 Bluetongue virus 4 NC_006024 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JN255895,JN255945, JN255885 Bluetongue virus 4 NC_006025 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Bluetongue virus seg. 5 AM778440,JN255886 ,AM778439,JN25594 6,JN255896,AM7784 41 Bluetongue virus 5 NC_006007 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 8 AM900378 Bluetongue virus 5 NC_006010 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586702,AJ586700, AJ586701 Bluetongue virus 5 NC_006015 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. JX272578 10 Bluetongue virus 6 NC_006010 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586703 Bluetongue virus 6 NC_006015 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. JX272568 10 Bluetongue virus 7 NC_006007 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JQ086298 Bluetongue virus 7 NC_006008 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JQ086299 Bluetongue virus 7 NC_006010 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 6 JQ086296,AJ586704 Bluetongue virus 7 NC_006013 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 2 JQ086292 Bluetongue virus 7 NC_006014 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 3 JQ086293 Bluetongue virus 7 NC_006015 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. JQ086300,JX272558 10 Bluetongue virus 7 NC_006022 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JQ086297 Bluetongue virus 7 NC_006023 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JQ086291 Bluetongue virus 7 NC_006024 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JQ086294 Bluetongue virus 7 NC_006025 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 5 JQ086295 Bluetongue virus 8 NC_006007 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 8 FJ183381,AM900389, AM498058 Bluetongue virus 8 NC_006008 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 9 FJ183382,AM498059 Bluetongue virus 8 NC_006010 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Bluetongue virus seg. 6 FJ183379,AJ586707, AJ586706,AJ586705 Bluetongue virus 8 NC_006013 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 2 AM498052 Bluetongue virus 8 NC_006014 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 3 AM498053,FJ183376 Bluetongue virus 8 NC_006015 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Bluetongue virus seg. AY120938,AF512924, 10 FJ183383,JX272548, AF512919,AM498060 Bluetongue virus 8 NC_006022 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 7 AM498057,FJ183380 Bluetongue virus 8 NC_006023 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. 1 AM498051,FJ183374 Bluetongue virus 8 NC_006024 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 4 FJ183377,AM498054, JX680450 Bluetongue virus 8 NC_006025 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Bluetongue virus seg. 5 FJ183378,AM498055, AM498056 Bluetongue virus 9 NC_006007 vertebrates,invertebrates 12 Reoviridae,Orbivirus,Bluetongue virus seg. 8 JN255919,AM900375 ,AM900374,JQ08630 8,JF443164,JN25596 9,AM900388,JN2559 09,AM900377,AM900 385,JN255959,AM90 0376 Bluetongue virus 9 NC_006008 vertebrates,invertebrates 11 Reoviridae,Orbivirus,Bluetongue virus seg. 9 JF443161,JQ086309, JN255960,JN2565970, JN255910,JN255920 Bluetongue virus 9 NC_006010 vertebrates,invertebrates 14 Reoviridae,Orbivirus,Bluetongue virus seg. 6 AJ586685,JN255967, AJ586686,JF443160, JQ086306,JN255957, AJ586688,JN255917, JN579709,AJ586683, JN255907,AJ586684, AJ586687,AJ586708 Bluetongue virus 9 NC_006013 vertebrates,invertebrates 13 Reoviridae,Orbivirus,Bluetongue virus seg. 2 JF443157,JN255953, DQ191285,DQ19128 4,JQ086302,JF44315 6,JN255913,DQ1912 82,JF443167,JN2559 63,JF443155,DQ1912 83,JN255903 Bluetongue virus 9 NC_006014 vertebrates,invertebrates 11 Reoviridae,Orbivirus,Bluetongue virus seg. 3 DQ186797,DQ18680 5,JN255954,DQ1867 95,JQ086303,JN2559 04,JN255964,JF4431 58,DQ186808,DQ186 790,JN255914 Bluetongue virus 9 NC_006015 vertebrates,invertebrates 8 Reoviridae,Orbivirus,Bluetongue virus seg. JQ086310,JF443165, 10 AY438034,JN255961, JX272538,JN255911, JN255971,JN255921 Bluetongue virus 9 NC_006022 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Bluetongue virus seg. 7 JN255908,JQ086307, JN255968,JN255918, JN255958,JF443162 Bluetongue virus 9 NC_006023 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Bluetongue virus seg. 1 JN255902,JQ086301, JN255952,JN255962, JN255912,JF443166 Bluetongue virus 9 NC_006024 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Bluetongue virus seg. 4 JN255965,JN255905, JN255955,JQ086304, JN255915,JF443159 Bluetongue virus 9 NC_006025 vertebrates,invertebrates 10 Reoviridae,Orbivirus,Bluetongue virus seg. 5 AM778443,JN255916 ,AM778444,JN25595 6,JF443163,AM77844 2,JN255906,JQ08630 5,JN255966,AM7784 45 Boolarra virus NC_004142 vertebrates,invertebrates 1 Nodaviridae,Alphanodavirus,Boolarra virus seg. 2 AF329080 Boolarra virus NC_004145 vertebrates,invertebrates 1 Nodaviridae,Alphanodavirus,Boolarra virus seg. X15960 RNA 2 Buggy Creek virus NC_013528 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Fort Morgan virus — HM147986 Changuinola virus NC_022633 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 2 KF624615 Changuinola virus NC_022634 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 3 KF624616 Changuinola virus NC_022635 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 5 KF624618 Changuinola virus NC_022636 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 7 KF624620 Changuinola virus NC_022637 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 8 KF624621 Changuinola virus NC_022638 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. KF624623 10 Changuinola virus NC_022639 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 1 KF624614 Changuinola virus NC_022640 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 4 KF624617 Changuinola virus NC_022641 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 6 KF624619 Changuinola virus NC_022642 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Changuinola virus seg. 9 KF624622 Chuzan virus NC_005986 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Palyam virus seg. 2 AB177635,AB177632 ,AB177634,AB17763 7 Chuzan virus NC_005988 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Palyam virus seg. 7 AY078469,AY078470 Corsican bluetongue virus NC_006007 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 8 AY124372 Corsican bluetongue virus NC_006008 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 9 AY124373 Corsican bluetongue virus NC_006014 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 3 AY124371 Corsican bluetongue virus NC_006015 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Bluetongue virus seg. AF481092,AF481093 10 Corsican bluetongue virus NC_006022 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 7 AY079124 Corsican bluetongue virus NC_006023 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Bluetongue virus seg. 1 AY154458 Eastern equine encephalitis NC_003899 vertebrates,invertebrates 10 Togaviridae,Alphavirus,Eastern equine — DQ241303,DQ24130 virus encephalitis virus 4,EF151503,AY70524 0,AY722102,U01034, EF151502,AY705241, X63135,EF568607 Eilat virus NC_018615 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Eilat virus — JX678730 Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 S68010 disease of deer virus disease virus Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AY386683,U43560,A disease of deer virus disease virus F188643 Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 HM641772,HM63689 disease virus disease virus 7,HM636907 Epizootic hemorrhagic Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AB030735,HM641773 NC_013397 vertebrates,invertebrates 3 disease virus disease virus ,D10767 Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 X61589,HM636909,H disease virus disease virus M641774,AB041933, EU856069,HM63689 Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 9 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 HM641775,HM63690 disease virus disease virus 0,HM636910 Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 HM641776,AB030736 disease virus disease virus ,X55782 Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 X59000,HM641777 disease virus disease virus Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 9 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 EF213556,D10766,E disease virus disease virus U856070,HM641778, AF484250,AY351653, AB041934,HM636913 ,HM636903 Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 HM636914,HM64177 disease virus disease virus 9,HM636904 Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 HM641780 disease virus disease virus Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 4 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AY351654,HM636906 disease virus disease virus 10 ,HM641781,HM63691 6 Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM745007,AM74501 disease virus (serotype 1/ disease virus 0 strain IbAr22619) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM745008 disease virus (serotype 1/ disease virus strain IbAr22619) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM745009 disease virus (serotype 1/ disease virus strain IbAr22619) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745011 disease virus (serotype 1/ disease virus strain IbAr22619) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745012 vertebrates,invertebrates disease virus (serotype 1/ disease virus strain IbAr22619) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745013 disease virus (serotype 1/ disease virus strain IbAr22619) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745014 disease virus (serotype 1/ disease virus strain IbAr22619) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745015 disease virus (serotype 1/ disease virus strain IbAr22619) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745016 disease virus (serotype 1/ disease virus 10 strain IbAr22619) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM744977 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM744978 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM744979 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 AM744980 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM744981 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM744982 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM744983 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM744984 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM744985 disease virus (serotype 1/ disease virus strain New Jersey) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM744986 disease virus (serotype 1/ disease virus 10 strain New Jersey) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM744987 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM744988 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM744989 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 AM744990 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM744991 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM744992 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM744993 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM744994 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM744995 disease virus (serotype 2/ disease virus strain 439) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM744996 disease virus (serotype 2/ disease virus 10 strain 439) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM744997 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM744998 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM744999 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 AM745000 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745001 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745002 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745003 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745004 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745005 disease virus (serotype 2/ disease virus strain Alberta) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745006 disease virus (serotype 2/ disease virus 10 strain Alberta) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM745077 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM745078 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM745079 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 AM745080 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745081 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745082 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745083 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745084 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745085 disease virus (serotype 2/ disease virus strain lbaraki) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745086 disease virus (serotype 2/ disease virus 10 strain lbaraki) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM745017 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM745018 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM745019 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 AM745020 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745021 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745022 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745023 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745024 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745025 disease virus (serotype 4/ disease virus strain IbAr 33853) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745026 disease virus (serotype 4/ disease virus 10 strain IbAr 33853) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM745028,AM74502 disease virus (serotype 5/ disease virus 7 strain CSIRO 157) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM745029 disease virus (serotype 5/ disease virus strain CSIRO 157) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM745030 disease virus (serotype 5/ disease virus strain CSIRO 157) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745031 disease virus (serotype 5/ disease virus strain CSIRO 157) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745032 disease virus (serotype 5/ disease virus strain CSIRO 157) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745033 disease virus (serotype 5/ disease virus strain CSIRO 157) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745034 disease virus (serotype 5/ disease virus strain CSIRO 157) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745035 disease virus (serotype 5/ disease virus strain CSIRO 157) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745036 disease virus (serotype 5/ disease virus 10 strain CSIRO 157) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM745067 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM745068 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM745069 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 AM745070 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745071 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745072 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745073 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745074 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745075 disease virus (serotype 6/ disease virus strain 318) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745076 disease virus (serotype 6/ disease virus 10 strain 318) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM745038,AM74503 disease virus (serotype 6/ disease virus 7 strain CSIRO 753) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM745039 disease virus (serotype 6/ disease virus strain CSIRO 753) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM745040 disease virus (serotype 6/ disease virus strain CSIRO 753) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745041 disease virus (serotype 6/ disease virus strain CSIRO 753) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745042 disease virus (serotype 6/ disease virus strain CSIRO 753) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745043 disease virus (serotype 6/ disease virus strain CSIRO 753) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745044 disease virus (serotype 6/ disease virus strain CSIRO 753) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745045 disease virus (serotype 6/ disease virus strain CSIRO 753) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745046 disease virus (serotype 6/ disease virus 10 strain CSIRO 753) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM745047 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM745048 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM745049 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 AM745050 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745051 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745052 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745053 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745054 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745055 disease virus (serotype 7/ disease virus strain CSIRO 775) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745056 disease virus (serotype 7/ disease virus 10 strain CSIRO 775) Epizootic hemorrhagic NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AM745057 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AM745058 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AM745059 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013399 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 4 AM745060 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AM745061 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AM745062 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AM745063 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 AM745064 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013404 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 9 AM745065 disease virus (serotype 8/ disease virus strain CPR 3961A) Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. AM745066 disease virus (serotype 8/ disease virus 10 strain CPR 3961A) Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 M76616 disease virus 1 disease virus Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 L27647 disease virus 1 disease virus Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 6 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AY261511,AY261510 disease virus 1 disease virus ,AY261509,AY26150 7,AY261508,AY2615 06 Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 L31764 disease virus 1 disease virus Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. L29023 disease virus 1 disease virus 10 Epizootic hemorrhagic NC_013397 vertebrates,invertebrates 11 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 2 AB078624,L33824,L3 disease virus 2 disease virus 3821,L33825,AB0786 32,L33823,AB078620 ,L33818,AB078628,L 33822,L33826 Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 AB078629,L33820,L3 disease virus 2 disease virus 3819,AB078621,AB0 78625 Epizootic hemorrhagic NC_013400 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 5 AB078633 disease virus 2 disease virus Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 5 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 AB078626,L27648,M disease virus 2 disease virus 69085,AB078622,AB 078630 Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 40 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 AY261505,AY261492 disease virus 2 disease virus ,AY261480,AY26149 8,AY261500,AY2614 96,AY261491,AY261 486,AB078623,AY26 1489,AY261485,AY2 61490,AY261502,AY 261494,AB078631,A Y261475,AY261497, AY261487,AY261495 ,AY261476,AY26146 9,AY261504,AY2615 03,AY261488,AY261 482,AY261477,AY26 1479,AY261471,AY2 61483,AY261473,AY 261481,AY261478,A Y261499,AY261470, AY261472,AB078627 ,AY261474,AY26149 3,AY261501,AY2614 84 Epizootic hemorrhagic NC_013403 vertebrates,invertebrates 3 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 8 M69091,AB084285,L disease virus 2 disease virus 31765 Epizootic hemorrhagic NC_013405 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. L29022 disease virus 2 disease virus 10 Epizootic hemorrhagic NC_013398 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 3 KC986825 disease virus 6 disease virus Epizootic hemorrhagic NC_013401 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 6 KC986823 disease virus 6 disease virus Epizootic hemorrhagic NC_013402 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 7 KC986824 disease virus 6 disease virus Fort Morgan virus NC_013528 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Fort Morgan virus — GQ281603 Getah virus NC_006558 vertebrates,invertebrates 7 Togaviridae,Alphavirus,Getah virus — EU015061,AY702913 ,EF631998,EU01506 2,AB859822,EU0150 63,EF631999 Highlands J virus NC_012561 vertebrates,invertebrates 3 Togaviridae,Alphavirus,Highlands J virus — GU167952,GQ22778 9,FJ827631 lbaraki virus NC_013396 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Epizootic hemorrhagic seg. 1 AB186040 disease virus Midway virus NC_012702 vertebrates,invertebrates 1 Midway virus — FJ554525 Mobuck virus NC_022620 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296323 segme n2 Mobuck virus NC_022621 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296325 segme n4 Mobuck virus NC_022622 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296327 n6 Mobuck virus NC_022623 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296328 segme n7 Mobuck virus NC_022624 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296330 segme n9 Mobuck virus NC_022625 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296331 10 Mobuck virus NC_022626 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296322 segme n1 Mobuck virus NC_022627 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296324 segme n3 Mobuck virus NC_022628 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296326 segme n5 Mobuck virus NC_022629 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Mobuck virus seg. KF296329 segme n8 Ndumu virus NC_016959 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Ndumu virus — HM147989 Nodamura virus NC_002690 vertebrates,invertebrates 1 Nodaviridae,Alphanodavirus,Nodamura virus seg. AF174533 RNA 1 Nodamura virus NC_002691 vertebrates,invertebrates 2 Nodaviridae,Alphanodavirus,Nodamura virus seg. AF174534,X15961 RNA 2 Nyamanini virus NC_012703 vertebrates,invertebrates 1 Nyamanini virus — FJ554526 Ockelbo virus NC_001547 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Sindbjs virus — M69205 Palyam virus NC_005986 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 2 AB014725 Palyam virus NC_005987 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 6 AB014726 Palyam virus NC_005988 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 7 AB014727 Palyam virus NC_005989 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 3 AB014728 Palyam virus NC_005990 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 1 AB018086 Palyam virus NC_005991 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 4 AB018087 Palyam virus NC_005992 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 9 AB018088 Palyam virus NC_005993 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 5 AB018089 Palyam virus NC_005994 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. 8 AB018090 Palyam virus NC_005995 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Palyam virus seg. AB018091 10 Peruvian horse sickness NC_007748 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Peruvian horse sickness seg. 1 DQ248057 virus virus Peruvian horse sickness NC_007749 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Peruvian horse sickness seg. 2 DQ248058 virus virus Peruvian horse sickness NC_007750 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Peruvian horse sickness seg. 3 DQ248059 virus virus Peruvian horse sickness NC_007751 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Peruvian horse sickness seg. 4 DQ248060 virus virus Peruvian horse sickness NC_007752 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Peruvian horse sickness seg. 6 DQ248061 virus virus Peruvian horse sickness NC_007753 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Peruvian horse sickness seg. 9 DQ248062,FJ225398 virus virus Peruvian horse sickness NC_007754 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Peruvian horse sickness seg. 8 DQ248063 virus virus Peruvian horse sickness NC_007755 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Peruvian horse sickness seg. 5 DQ248064 virus virus Peruvian horse sickness NC_007756 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Peruvian horse sickness seg. 7 DQ248065 virus virus Peruvian horse sickness NC_007757 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Peruvian horse sickness seg. FJ225399,DQ248066 virus virus 10 Salmon pancreas disease NC_003930 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Salmon pancreas AJ316244 virus ,NC_00343 disease virus 3 Salmonid alphavirus NC_003930 vertebrates,invertebrates 9 Togaviridae,Alphavirus,Salmon pancreas — KC122926,KC122919 subtype 3 ,NC_00343 disease virus ,KC122923,KC12291 3 8,KC122920,KC1229 25,KC122922,KC122 924,KC122921 Semliki forest virus NC_003215 vertebrates,invertebrates 7 Togaviridae,Alphavirus,Semliki forest virus — DQ189084,XQ4129,D 0189086,Z48163,DQ 189082,EU350586,A Y112987 Sindbjs virus NC_001547 vertebrates,invertebrates 14 Togaviridae,Alphavirus,Sindbjs virus — AF429428,KF737350, JQ771793,JQ771797, JQ771798,JQ771795, JX570540,GU361116 ,JQ2363,GU361118,A F103728,JQ771794,J 0771799,JQ771796 Sindbjs-like virus NC_001547 vertebrates,invertebrates 2 Togaviridae,Alphavirus,Sindbjs virus — U38304,U38305 Sindbjs-like virus YN87448 NC_001547 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Sindbjs virus — AF103734 Southern elephant seal NC_016960 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Southern elephant — HM147990 virus seal virus St Croix River virus NC_005997 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 1 AF133431 St Croix River virus NC_005998 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 2 AF133432 St Croix River virus NC_005999 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 3 AF145400 St Croix River virus NC_006000 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 4 AF145401 St Croix River virus NC_006001 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 5 AF145402 St Croix River virus NC_006002 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 6 AF145403 St Croix River virus NC_006003 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 7 AF145404 St Croix River virus NC_006004 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 8 AF145405 St Croix River virus NC_006005 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. 9 AF145406 St Croix River virus NC_006006 vertebrates,invertebrates 1 Reoviridae,Orbivirus,St Croix River virus seg. AF145407 10 Stretch Lagoon orbivirus NC_012754 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Stretch Lagoon orbivirus seg. 1 EU718676 Stretch Lagoon orbivirus NC_012755 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Stretch Lagoon orbivirus seg. 2 EU718677 Venezuelan equine NC_001449 vertebrates,invertebrates 132 Togaviridae,Alphavirus,Venezuelan equine — U55362,KC344436,U encephalitis virus encephalitis virus 55360,KC344447,AF 075255,AF375051,K C344486,L01442,KC 344510,KC344519,K C344449,U55345,JQ4 332,KC344475,AF07 5251,KC344501,KC3 44471,AF069903,KC 344491,KC344490,K C344430,U55350,KC 344455,KC344431,K C344469,KC344478, KC344446,KC344509 ,KC344482,KC34446 2,AF075254,AF10056 6,AF004472,KC3445 26,KC344438,KC344 429,KC344498,KC34 4458,AF075259,KC3 44433,KC344450,KC 344443,KC344522,K C344439,KC344485, KC344483,U55347,K C344467,AF075252, KC344466,KC344441 ,KC344484,KC34452 4,KC344503,KC3444 93,AY823299,KC344 495,KC344465,KC34 4474,AF004458,KC3 44513,KC344525,KC 344461,KC344442,K C344473,KC344440, KC344487,AF075257 ,AF075258,KC34450 5,KC344437,KC3445 27,AF075256,KC344 489,KC344457,KC34 4445,KC344502,KC3 44460,KC344518,KC 344528,KC344453,K C344515,KC344506, AY986475,KC344444 ,KC344468,KC34447 9,KC344464,KC3444 72,L04653,KC344463 ,U55342,AY741139,D 0390224,KC344435, AF075253,KC344432 ,KC344499,KC34445 1,L01443,KC344452, KC344496,KC344481 ,KC344508,KC34445 6,KC344523,KC3444 88,KC344517,KC344 511,KC344494,KC34 4448,KC344514,KC3 44507,KC344480,AY 973944,KC344504,K C344521,KC344470, KC344492,KC344454 ,KC344476,KC34450 0,KC344512,KC3445 20,AF004459,KC344 459,KC344516,KC34 4497,KC344477,KC3 44434,KF985959,L00 930 Wallal virus NC_022553 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. 1 KF234259 Wallal virus NC_022554 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. KF234260 segme n2 Wallal virus NC_022555 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. 3 KF234261 Wallal virus NC_022556 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. KF234263 segme n5 Wallal virus NC_022557 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. KF234265 segme n7 Wallal virus NC_022558 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. KF234267 segme n9 Wallal virus NC_022559 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. KF234268 10 Wallal virus NC_022560 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. KF234262 segme n4 Wallal virus NC_022561 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. KF234264 segme n6 Wallal virus NC_022562 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Wallal virus seg. KF234266 segme n8 Western equine NC_003908 vertebrates,invertebrates 9 Togaviridae,Alphavirus,Western equine — AF214040,GQ287640 encephalomyelitis virus encephalitis virus ,GQ287641,GQ28764 5,GQ287643,GQ2876 44,GQ287642,GQ287 647,GQ287646 Whataroa virus NC_016961 vertebrates,invertebrates 1 Togaviridae,Alphavirus,Whataroa virus — HM147993 Yunnan orbivirus NC_007656 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. 1 AY701509 Yunnan orbivirus NC_007657 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. 2 AY701510 Yunnan orbivirus NC_007658 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. 3 AY701511 Yunnan orbivirus NC_007659 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. 4 AY701512 Yunnan orbivirus NC_007660 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. 5 AY701513 Yunnan orbivirus NC_007661 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. 6 AY701514 Yunnan orbivirus NC_007662 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. 7 AY701515 Yunnan orbivirus NC_007663 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. 8 AY701516 Yunnan orbivirus NC_007664 vertebrates,invertebrates 2 Reoviridae,Orbivirus,Yunnan orbivirus seg. 9 AY701517,FJ225402 Yunnan orbivirus NC_007665 vertebrates,invertebrates 1 Reoviridae,Orbivirus,Yunnan orbivirus seg. AY701518 10 Aedes flavivirus NC_012932 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Aedes flavivirus — KC181923,AB488408 human Aguacate virus NC_015450 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. M HM566137 human Aguacate virus NC_015451 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. L HM566138 human Aguacate virus NC_015452 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. S HM566139 human Aino virus NC_018459 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shuni virus seg. M HE795088 human Aino virus NC_018460 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shuni virus seg. S HE795089 human Aino virus NC_018465 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shuni virus seg. L HE795087 human Akabane virus NC_009894 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,Akabane virus seg. L JQ308779,AB190458 human Akabane virus NC_009895 vertebrates,invertebrates, 42 Bunyaviridae,Orthobunyavirus,Akabane virus seg. M AB297833,AB289324 human ,AB297822,AB29783 7,AB297831,AB2978 19,AB297844,AB297 839,AB426282,AB29 7834,AB297827,AB2 97821,AB297841,AB 297838,AB297824,A B297842,AB297823, AB297825,AB297845 ,AB297829,AB29785 1,AB436954,AB2978 35,AB297828,AB297 850,AB297826,AB29 7832,AB297840,AB3 73233,AB297847,AB 297843,AB289323,A B426281,AB100604, AB297820,AB297846 ,AB297836,AB29781 8,AB297849,AB2893 22,AB297848,AB297 830 Akabane virus NC_009896 vertebrates,invertebrates, 21 Bunyaviridae,Orthobunyavirus,Akabane virus seg. S AB289319,AB426275 human ,AB426277,AB42627 4,AB289320,AB0008 51,AB426278,AB426 272,AF034939,AB373 232,AB373234,AB42 6279,AB426276,AF52 9883,AB426273,AB4 26271,AB426280,AF0 34942,AF034941,AF0 34940,AB289321 Alenquer virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119402 human Alenquer virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119401 human Alenquer virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119403 human Alfuy virus NC_000943 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Murray Valley — AY898809 human encephalitis virus Alkhumra hemorrhagic NC_004355 vertebrates,invertebrates, 19 Flaviviridae,Flavivirus,Kyasanur forest disease — JF416955,JF416950, fever virus human virus JF416963,JF416956, JX271893,JF416954, JF416951,JN860200, JF416961,JF416964, JF416957,JF416967, JF416949,JF416966, JF416953,JF416965, JX271892,JF416962, JF416952 Alkhurma hemorrhagic NC_004355 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Kyasanur forest disease — AF331718 fever virus human virus Alphavirus M1 NC_001544 vertebrates,invertebrates, 1 Togaviridae,Alphavirus,Ross River virus — EF011023 human Apoi virus NC_003676 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Apoi virus — AF160193 human Ariquemes virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119405 human Ariquemes virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119404 human Ariquemes virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119406 human Armero virus NC_015450 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. M HQ661806 human Armero virus NC_015451 vertebrates,invertebrates, 2 Bunyaviridae,Phlebovirus,Aguacate virus seg. L HM566140,HQ66180 human 5 Armero virus NC_015452 vertebrates,invertebrates, 2 Bunyaviridae,Phlebovirus,Aguacate virus seg. S HM566142,HQ66180 human 7 Aroa virus NC_009026 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Aroa virus — AY632536 human Bagaza virus NC_012534 vertebrates,invertebrates, 4 Flaviviridae,Flavivirus,Bagaza virus — AY632545,EU684972 human ,HQ644143,HQ64414 4 Banna virus NC_004211 vertebrates,invertebrates, 2 Reoviridae,Seadornavirus,Banna virus seg. 1 AF133430,AF168005 human Banna virus NC_004217 vertebrates,invertebrates, 3 Reoviridae,Seadornavirus,Banna virus seg. 2 AF134528,AF134526, human AF134514 Banna virus NC_004218 vertebrates,invertebrates, 2 Reoviridae,Seadornavirus,Banna virus seg. 3 AF134515,AY549307 human Banna virus NC_004219 vertebrates,invertebrates, 3 Reoviridae,Seadornavirus,Banna virus seg. 4 EU265698,AY549308 human ,AF134516 Banna virus NC_004220 vertebrates,invertebrates, 2 Reoviridae,Seadornavirus,Banna virus seg. 5 AF134517,AY549309 human Banna virus NC_004221 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Banna virus seg. 6 AF134521,AF168006, 5 human AF134527,AF134524, AF134518 Batai virus NC_001926 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. M DQ436460 human virus Batai virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S X73464 human virus Birao virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S AM711131 human virus Bozo virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S AM711132 human virus Brazoran virus NC_022037 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Brazoran virus seg. S KC854416 human Brazoran virus NC_022038 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Brazoran virus seg. M KC854417 human Brazoran virus NC_022039 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Brazoran virus seg. L KC854418 human Bunyamwera virus NC_001925 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. L X14383 human virus Bunyamwera virus NC_001926 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. M M11852 human virus Bunyamwera virus NC_001927 vertebrates,invertebrates, 4 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S DQ0353,AM711130,A human virus M709778,AF325122 Cache Valley virus NC_001926 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. M AF082739,AF082576 human virus Cache Valley virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S X73465 human virus California encephalitis virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M AF123483 human encephalitis virus California encephalitis virus NC_004110 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,California seg. S U12797,U12800 human encephalitis virus Candiru virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119408 human Candiru virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119407 human Candiru virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119409 human Cell fusing agent virus NC_001564 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Cell fusing agent virus — M91671 human Chaoyang virus NC_017086 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Chaoyang virus — JQ068102,JQ308185 human Chatanga virus NC_004108 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. L EU616903 human encephalitis virus Chatanga virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M EU621834 human encephalitis virus Chikungunya virus NC_004162 vertebrates,invertebrates, 161 Togaviridae,Alphavirus,Chikungunya virus — GQ42821 1,FR717336 human ,HM045789,JQ06762 4,FJ445510,FJ51365 4,GU301781,GU1993 51,FN295485,HM045 819,FJ445463,HM04 5787,HM045796,JQ8 61256,AM258994,FJ8 07899,HM045812,HM 045814,HE806461,J 0861253,HQ456253, HM045803,EF027137 ,EF027139,HM04579 0,FJ513637,AY72673 2,AM258991,EU7037 60,HM045820,GU301 780,JF274082,HM04 5816,FJ445431,HQ84 6357,HM045802,EU5 64335,GU301779,HM 045821,GU199350,H 0846356,FJQ00066,F J513632,FJ445428,F JQ00069,KC862329,J 0861260,FJ445433,F J513629,HM045811, HM045807,GU01352 9,FR717337,HM0458 13,HM045797,AM258 995,GU199352,FJ513 635,AM258992,HM04 5798,FJ513645,HQ84 6358,FJ445427,DQ44 3544,EF027136,EU7 03759,HQ456251,AF 369024,FJ513628,EF 452493,FJ445432,FN 295483,FJQ00062,GU 189061,HM045795,E U703761,HQ846359, FJQ00067,GQ428214 ,HQ456252,GU19935 3,FJQ00064,HM0458 10,HM045822,HM045 823,FJ513673,FN295 487,JQ861254,EF210 157,HM045791,JQ86 1257,FJ445443,EF02 7141,JN558836,HMO 45805,FJQ00063,HM 045806,HM045786,E F027135,GQ428215, HM045817,HM04581 5,FN295484,FJ80789 8,EU372006,GQ4282 13,EF452494,FJ5136 75,HM045818,JN558 835,HM045801,GQ42 8212,GQ905863,HMO 45784,AF490259,EFO 27134,HQ456255,GU 013528,FJ959103,JQ 861258,FJ513679,H M045793,EU703762, HM045785,FJQ00068 ,FJQ00065,FJ445430, HM045804,FJ445426 ,HM045809,AM25899 3,FJ807896,HM0457 99,HM045808,L3766 1,FJ445502,FJ44548 4,FJ807897,JN55883 4,AB455493,EF01235 9,EU244823,HM0458 00,FJ445511,HQ4562 54,HM045792,FJ513 657,GQ428210,HMO4 5788,GU908223,FJ44 5445,EF027140,KF31 8729,AM258990,EU5 64334,GU013530,JX 088705,HM045794, EF027138,AB455494,J 0861255 Chikungunya virus NC_004162 vertebrates,invertebrates, 1 Togaviridae,Alphavirus,Chikungunya virus EU037962 Wuerzburg human Chize virus NC_005214 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. L JF838324 human Chize virus NC_005220 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. M JF838325 human Chize virus NC_005221 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. S JF838326 human Colorado tick fever virus NC_004180 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 9 AF000720 human Colorado tick fever virus NC_004181 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 1 AF133428 human Colorado tick fever virus NC_004182 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 2 AF139758 human Colorado tick fever virus NC_004183 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 3 AF139759 human Colorado tick fever virus NC_004184 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 4 AF139760 human Colorado tick fever virus NC_004185 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 5 AF139761 human Colorado tick fever virus NC_004186 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 6 AF139762 human Colorado tick fever virus NC_004187 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 7 AF139763 human Colorado tick fever virus NC_004188 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. 8 AF139764 human Colorado tick fever virus NC_004189 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. AF139765 human 10 Colorado tick fever virus NC_004190 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. U53227 human 12 Colorado tick fever virus NC_004191 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Colorado tick fever virus seg. U72694 human 11 Crimean-Congo NC_005302 vertebrates,invertebrates, 4 Bunyaviridae,Nairovirus,Crimean-Congo seg. S AF358784,AF354296, Hemorrhagic Fever virus human hemorrhagic fever virus AF362080,AY029157 strain China Crimean-Congo NC_005300 vertebrates,invertebrates, 50 Bunyaviridae,Nairovirus,Crimean-Congo seg. M DQ211634,DQ21163 hemorrhagic fever virus human hemorrhagic fever virus 7,DQ206448,HQ3781 85,HQ378187,AB069 675,AF350448,AB069 672,DQ094832,AB06 9670,JN572085,AF46 7769,DQ157174,DQ2 11625,AY900145,AJ5 38199,AB069673,DQ 211631,AY900144,A B069671,DQ211630, AB069669,DQ157175 ,AY900143,AY22347 6,DQ211635,AY9001 41,DQ211632,AF467 768,AF350449,AY900 142,DQ21 1626,DQ44 6216,JN572086,AB06 9674,DQ211627,EU0 37902,DQ211628,JN 572084,AJ538197,JN 572083,DQ21 1633,U 39455,AY675511,AY 179962,HQ378184,A Y179961,DQ211636, DQ446215,DQ21162 9 Crimean-Congo NC_005301 vertebrates,invertebrates, 32 Bunyaviridae,Nairovirus,Crimean-Congo seg. L HQ378182,DQ21162 hemorrhagic fever virus human hemorrhagic fever virus 1,EU044832,AY3895 08,AY947890,DQ076 412,DQ21 1620,DQ21 1616,DQ211613,AY9 47891,DQ211614,DQ 211617,AY675240,A Y995166,DQ211615, HQ378180,DQ21162 2,KC344855,DQ2116 24,DQ076417,DQ211 619,DQ211612,HQ37 8183,DQ099335,DQ2 11623,AY389361,AY 720893,AY422209,D 0076414,HQ378181, DQ211618,AY422208 Crimean-Congo NC_005302 vertebrates,invertebrates, 52 Bunyaviridae,Nairovirus,Crimean-Congo seg. S DQ227495,JN572088 hemorrhagic fever virus human hemorrhagic fever virus ,DQ076415,AY27767 2,DQ211639,AY2976 92,DQ446214,DQ217 602,U88414,DQ2116 42,DQ211647,U8841 3,JN572089,DQ2116 40,EF123122,JN5720 87,U88410,DQ21164 4,AF481799,AY04908 3,DQ076416,DQ2116 43,AJ538198,DQ076 413,DQ227496,DQ44 6213,DQ211638,AJO 10648,M86625,AF48 1802,DQ21 1649,U88 415,DQ206447,U049 58,AF415236,DQ211 645,AF527810,AY223 475,AY297691,AJQ10 649,U88412,DQ2116 46,DQ211641,DQ211 650,HQ3781 79,DQ44 6212,AJ538196,DQ2 11648,U8841 1,U8841 6,DQ133507,AY2776 76 Crimean-Congo NC_005300 vertebrates,invertebrates, 1 Bunyaviridae,Nairovirus,Crimean-Congo seg. M AF338470 hemorrhagic fever virus human hemorrhagic fever virus strain BA88166 Culex flavivirus NC_008604 vertebrates,invertebrates, 22 Flaviviridae,Flavivirus,Culex flavivirus — FJ663034,AB701770, human AB701767,AB701775 ,JQ308186,AB701769 AB701768,EU87906 0, JQ308189,AB70176 6, AB701774,AB7017 72, AB377213,AB701 776, HQ678513,AB70 1771, JQ308187,JQ30 8190,AB262759,AB7 01773,JQ308188,FJ5 02995 Deer tick virus NC_003687 vertebrates, invertebrates, 1 Flaviviridae,Flavivirus,Powassan virus — AF311056 human Dengue virus NC_002640, vertebrates, invertebrates, 22 Flaviviridae,Flavivirus,Dengue virus — CS805346,CS479167, NC_001475, human CS477304,CS477305, NC_001474, CS477264,CS479203, NC_001477 JN054255,CS805343, JN054256,CS477263, CS477302,CS477265, CS479165,CS479202, CS479204,CS805344, CS479206,CS479205, CS805348,CS805345, CS477306, CS805347 Dengue virus 1 NC_002640 vertebrates, invertebrates, 1456 Flaviviridae,Flavivirus,Dengue virus — EU482708,GU131721, ,NC_001475 human HM181969,FJQ24443, ,NC_001474 FJ744701,GU056031, NC_001477 HM488255,FJ8984 12, FJ410186,FJ6398 02, EU081229,KJ1893 62, JQ045632,GQ199 842, EU081244,FJ639 682, JN638340,GU13 1827, JQ915079,EUO 81254, FJ410274,GU1 31834, GQ868505,GQ 199800, FJ432746,FJ 410206, FJ410213,EU 482789, GU 131695,G U131839, GU131820,FJQ24447, FJ639683,FJQ24439, GQ 199849 , F J850099, F J898408, GU131716, GU13175 6,JQ915077, GU1319 26,DQ672557, GU131 749,JQ045664, GQ19 9772,FJ410201, FJ89 8418, JQ045642, FJ46 1340,FJ432727, HM1 81953,FJ639806, JQ0 45658,GU131835, FJ8 82531 ,AY732480, KJ1 89303, FJ898420, KF9 21911 ,JQ048541 , FJ8 50114,GQ199823, HM 181949, AY732482, JN819417,AY145122, E U482615,GU131863, EU081248,FJ639693, FJ687433, FJ882533, FJ882557,JQ045650, FJ410204,EU482529, AV732476,FJ882558, FJ410179,GQ199797 , FJ410267,GU131770 , EF025110,FJ410194 , HQ891315,HM18193 6, JQ045628,FJ37329 7,FJ639812,EU66039 7,GQ868539,EU6604 18,GQ868633,FJ639 685,EU596501,FJ461 308,JF937606,FJ205 874,AB195673,EU08 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82498,KJ189328,GQ 199813,GU131754,G 0199858,FJ850101,K J189351,FJ850113,G U131794,EU081230, HM181962,GU13189 2,FJ410205,KJ18936 3,GU131837,EU4825 06,JF937607,FJ1820 29,FJ410285,FJ6398 19,HM181941,GU131 709,GQ199776,FJ41 0173,EU482479,EU4 82510,GU131731,FJ4 10222,EU687247,GQ 868518,FJ461323,EU 482504,GU131679,G Q868613,GU131984, EU482609,GU131970 ,FJ882567,GQ19982 6,FJQ24464,FJ17677 9,EU677153,GU1319 48,GU131724,HM181 942,FJ432720,FJ639 741,FJ410270,FJ562 104,FJ898448,GQ19 9877,JF937596,EU48 2802,FJ410212,GQ8 68507,EU677177,KJ1 89312,EU081242,FJ4 78457,GU131793,GU 131787,GU131816,FJ 410184,GU131705,E U081258,GQ199830, EU677156,GU131765 ,GQ199872,FJ41021 8,EU482522,JN81940 3,AY732483,EU0812 36,JF937615,EU4824 81,JF459993,GU1318 15,KJ189307,GU131 789,FJ410199,AY277 665,FJ461315,HM48 8256,FJ898427,FJ63 9808,FJ639689,JQ04 5655,FJ432740,GQ8 68615,FJ639686,GU1 31745,DQ672564,EU 482533,FJ639794,G 0868568,GQ199857, EU482808 Dengue virus 2 NC_002640 vertebrates,invertebrates, 1024 Flaviviridae,Flavivirus,Dengue virus — FJ850074,JF730051, ,NC_00147 human EU596490,EU482725 5,NC_0014 ,EU482622,JN819407 74,NC_001 ,GU131931,EU48276 477 2,FM210226,GU1318 64,GU131896,EU677 148,EU687246,EU59 6500,EU482444,EU5 29701,GQ868552,EU 660398,GQ398270,F J744716,EU482675,F J744705,EU482548,F J639718,GQ868557, EU569695,EU569699 ,GQ868604,GQ86864 6,KC294212,EU4825 90,EU596488,FJQ244 74,FM210237,EU482 772,GQ398296,JN81 9408,GQ398299,GU1 31900,EU482761,EF 105381,EU920836,E U482647,FJ639709,H 0541788,AF100459, FJ882602,EU482606, KF041237,EU482573 ,FJ898454,EU482560 ,JXQ79688,HQ33218 5,EU920834,FJ18201 4,EU482679,FJ89846 7,AB479042,FJ90695 8,EU920849,EU5697 02,EU596489,EU596 498,FJ898435,EU482 623,HM582103,EU48 2643,EU687225,HQ7 05624,EU482569,EU 482472,FJ906969,FJ 850119,FJ639700,EU 482673,EU482664,FJ 024452,GQ398310,E U677142,GU131902, KF041235,FJ639837, FJ410215,AB122022, AF022439,FM210223 ,EF105387,JN819418 ,FJ687439,GQ86855 0,AF038402,FJ43272 6,FJ639828,EU48265 7,GQ868591,EU4827 48,EU482585,FJ6397 88,FJ639710,EU4825 72,AF169679,EF1053 84,HM582109,FJ850 085,EU482554,EU48 2542,EU482691,GQ3 98285,AF359579,KC 294206,FJ461321,EU 482759,AF204178,D 0181800,KF955360, FJ205885,FJ850064, GQ868515,EU48258 4,EU687242,FJ74471 0,FJ687445,FJ63983 1,EU482694,FJ89845 0,FJ744721,EU48254 4,EU482698,EU4826 29,FJ205880,EU4824 64,GU131959,EU596 487,GQ398261,EU48 2579,GU131899,GQ1 99894,GQ199890,GU 131880,GU131883,E U687228,EU482471,J X966380,FJ898460,G Q398268,GU131974, FJ744719,EU569694, EU482631,GQ39827 5,FJ639705,FJ89843 8,GQ199866,EU6771 38,GQ868603,EU920 845,EU482665,GU13 1885,EU660406,EU5 96499,FJ744709,JN8 19421,JX286525,AY7 44147,FJ906967,AY0 37116,JF730045,FM2 10227,KF041232,JF3 57906,EU677149,EU 482697,GQ398259,A F169685,EU482734,F J639699,AB479041,E U482449,EU660404, EU482742,GQ86855 8,EU677144,KC2942 18,GQ398295,FM210 221,KF955359,GQ86 8631,EU920840,KC2 94215,FJ850076,M19 197,EU482670,JF327 392,GQ252677,FJ74 4704,EU482550,JN81 9416,EU482752,JQO 45684,GQ398265,EU 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292,AF100468,GQ39 8274,FM210242,KC2 94208,GQ398294,EU 482652,EU482690,H M582099,JX966379, EU081180,JN819422, EU482600,JN819424, HQ332187,HQ89102 4,EU482562,EU6872 32,FJ906966,EU6604 15,EU687213,HM181 971,EU482546,KF95 5402,GQ398264,EU6 87244,AY702036,EU 482753,EU482621,FJ 547090,AY702038,F M210206,EU529694, FM210229,JQ955624 ,FJ898478,EU482640 ,FJ882594,EU482661 ,FJ744741,GQ86862 3,EU482608,GQ3983 07,FJ859028,JXQ796 94,AF169687,GU131 897,EU569692,AJ487 271,EU920828,EU48 2593,GQ868589,FJ7 44707,FM210203,FJ6 39783,EU482655,EU 482728,FJ639835,DQ 181804,M29095,EU6 87223,EU920837,FM 210234,FJ898466,EU 482750,GQ398303,F M210243,EU569709, EU854293,EU482653 ,EU482746,FJ410259 ,EU081177,EU48265 1,FJ850062,GQ8685 44,HQ332189,EU677 146,EU482736,EU68 7230,GQ868597,EU4 82575,EU482738,EU 482740,FM210236,E U482604,AF489932,F J898449,HQ541786, EU482731,EU569704 ,FJ687442,EF105380 ,FJ639733,EU781135 ,FJ850078,FJ410202, JF730052,FJ410195, EU529700,AF022438 ,AF100469,EU48270 3,GQ398269,FJ7447 17,EU482598,JN3684 76,HM582100,FM210 230,FM210241,AF11 9661,HM631866,EU4 82680,GU131843,EU 482589,FM210204,E U687220,GQ199869, EU596484,AF100462 ,GU131955,EU48266 3,EU482607,FJ87380 8,EU482686,GQ3982 87,GQ868541,FJ906 961,EU569714,EU48 2549,EU482447,EU4 82574,EU920848,EU 920842,FJ410223,EU 482648,FM210235,E U529695,EU081178, KC294220,FM210214 ,EU482756,FJ410237 ,EU482692,FJ744742 ,JF357907,EU569717 ,FJ850107,FJ461309, EU482786,EU482732 ,EU482693,FJ744744 ,DQ181803,AF27661 9,EU569710,EU5964 91,FJ850115,EU4826 35,EU569712,HQ332 186,FJ639830,HM58 2117,EU482597,EU6 60400,FJ873811,HM 582110,FJ467493,JF 730055,GQ868497,F J810412,EU482565, GQ398286,FM21020 5,GQ398277,EU4825 45,GQ398313,GQ398 306,M20558,EU4827 78,EU482727,EU482 681,EU687229,AF16 9684,FJ810411,AF02 2434,EU569693,EU4 82561,JN819419,FJ8 82593,KC964095,FJ8 98452,FJ744711,EF1 05388,EU482771,FM 210222,AF022440 Dengue virus 3 NC_002640 vertebrates,invertebrates, 785 Flaviviridae,Flavivirus,Dengue virus — HQ705619,KF955479 ,NC_00147 human ,GQ199887,EU48255 5,NC_0014 8,EU081202,FJ88257 74,NC_001 8,FJ639714,KJ18929 477 3,EU081219,FJ46133 8,KF955457,EU6872 39,GU131954,FJ6397 24,EU660407,EU529 704,AB214882,FJ639 779,KF041258,FJ850 080,AB189125,FJ639 760,EU687221,GQ86 8617,EU482460,HM6 31859,JF937624,FJ1 82040,KF955463,GQ 868572,GU131867,FJ 850086,HM181977,A Y676351,EU660408, EU081221,AY858043 ,HQ541791,EU48245 7,JF937643,FJ18200 5,JF937631,JF93763 3,FJ639789,M93130, FJ547074,JQ045691, GU131933,FJ432743, FJ547069,FJ373302, GQ868629,KJ189299 ,JQ045693,FJ639762 ,JF808126,GU131873 ,EU482596,JF920408 ,FJ432731,FJ744726, KF955333,FJ639758, FJ639803,GU131859, HQ705611,FJ432741, FJ205871,JF937636, FJ639798,KJ189265, JQ920482,FJ639793, EU529692,FJ639713, EU529705,AY662691 ,GU131937,FJ850049 ,JF937625,KF955473 ,AY676348,EF629370 ,EU529688,AY67914 7,JF937648,AY49687 1,EU081214,AY8580 47,HG316483,JQ920 484,FJ882571,GQ86 8627,KJ189296,FJ54 7081,FJ182041,FJ63 9801,FJ547083,GQ8 68574,EU081190,KF 955461,EF629368,FJ 547062,GU131907,H M631864,EU482563, FJ639769,JN000936, FJ410229,FJ182015, FJ639761,KJ189283, HQ705621,KJ189273 ,KJ189269,GU13195 3,FJ639795,FJ63972 3,FJ182038,KJ18925 8,HQ671178,JQ0456 92, FJ898459,GU1319 11,HM756277,GU131 870,GU131905,FJ882 572,KJ189262,FJ850 098,GQ199862,JF93 7630,JF920399,JF80 8121,HM756282,JF8 08118,JF808119,HQ5 41789,FJ639720,EU0 81220,JQ920485,KF9 55458,KJ189280,EU4 82453,GU131857,EU 081181,DQ675519,E U660411,JQ920488,F J547076,AY770511,J Q920487,JF937634,J F937637,GU131872, EU081189,EU726774 ,FJ873813,HM18193 5,FJ547066,GU13194 4,FJ639731,FJ54707 7,EU482461,FJ85007 9,HM631854,GQ8685 78,JF937646,FJQ244 65,EU081215,AY858 041,FJ913015,HQ705 615,AY496873,GU13 1853,KF824902,GU1 31862,JQ920476,FJ5 62107,KJ189263,FJ7 44740,EU687219,KJ1 89292,AY744682,KJ1 89277,JN093517,EU4 82454,FJ562102,EU0 81223,EU081203,FJ6 39774,GU131869,EU 529703, HQ705623,FJ 744727,JF937626,AB 214881,AY858044,EF 629369,EF629373,FJ 390375,FJ898470,KJ 189268,JN093515,FJ 898445,JQ920478,H M631861,HM756281, EU529690,GU131904 ,KJ189298,FJ639750, FJ54 7061,KJ189256, FJ882577,DQ675528, FJ562097,KJ189278, FJ898446,GU131951, KJ189271,GU131848 ,FJ898462,EU081195 , DQ675520, HQ70562 2,EU529698,KJ18926 6,FJ639784,FJ63979 2,GQ868593,AY7446 83,FJ898444,GU1318 76,FJ639778,FJ432722, FJ639755,EU081186, HQ705617,GU131847, FJ639770,EU529 699, EU726769,FJ850097, JQ920480,EU596494, EU081192,KF9 55466,FJ898472,AB2 14880,HQ166032,KF 921916,JF808122,DQ 863638,FJ744734,GU 131915,JF937647,JF 295012,GQ199886,F J850094,JF808120,E U482613,EU529686,J F920404,FJ639768,H 0166033,HQ332170, JF920396,FJ744729, DQ675525,EU081196 ,KJ189274,EU529683 ,EU482559,HM18193 3,HM181934,FJ5470 78,EU081194,FJ6397 76,GQ868548,FJ461 334,KJ189291,HQ70 5610,GQ252678,GU1 31913,GU131871,JF8 08124,FJ639805,GQ 868577,GU131934,E U081206,HQ705613, JQ045694,AB189127, FJ639756,FJ744735, EU482566,GU131941 ,EU081208,EU72677 2,JF937638,FJ88257 4,EU854298,DQ4016 90,EU687218,HM181 975,FJ461326,FJ898 457,HM631857,JF93 7620,FJ644564,FJ74 4737,GU131939,KF9 55471,AY744677,HM 631869,FJ562099,KJ 189288,FJ898475,G 0466079,JF937623,J 0920486,EU081205, GU131855,GU13185 6,FJQ24466,GQ8685 47,AY744684,FJ4613 37,HM631862,AY676 352,GU131952,HM18 1972,FJ182006,GU13 1877,GU131846,HM6 31860,JF920402,KJ1 89270,FJ205870,KJ1 89285,GU131938,JF9 37632,FJ182013,FJ8 82575,AY923865,HM 631858,JQ045690,E U482614,JF920405,F J639751,FJ898469,F J744731,KJ189260,A Y496874,FJ432728,D Q675531,EU482452, EF643017,EU482595 ,EU596493,EU66040 9,EU726773,FJ85009 6,FJ898464,EU56969 1,FJ810416,FJ89846 3,GU131861,KF9554 76,FJ547085,EU0812 25,JF920409,GU1318 66,EU854291,EU932 688,JF808127,JQ045 689,AY858042,EU08 1212,GQ199891,JF9 37639,FJ898476,DQ4 01692,AY744679,DQ 675527,JF808128,JF 920393,FJ639763,FJ 461322,FJ547079,G 0868626,KJ189289,J F920407,HQ541796, FJ182037,KJ189259, EU687198,GQ86854 6,GQ199861,EU5297 02,FJ898458,JF5046 79,HQ705609,AY676 350,HM631863,FJ74 4732,AY099337,FJ63 9817,JF937621,KJ18 9261,EU482612,EU4 82564,GU131874,EU 482459,KJ189300,AY 496879,JF937640,JF 920401,FJ850056,KJ 189290,EU081201,FJ 898441,FJ390377,H M756276,EUO81204, GU131903,GQ19988 9,EU569690,GQ1998 63,JN662391,FJ8500 89,DQ401693,JF9203 98,FJ639826,GQ199 870,FJ898468,EU081 198,FJ639721,KJ189 282,KF955332,DQ67 5523,EU781136,FJ54 7072,FJ373306,GQ8 68587,EU482455,FJ5 62103,AY744685,FJ6 39827,FJ898456,EU6 60410,FJ390376,GU1 31860,GU131852,GU 131850,FJ898474,EU 932687,GU131878,H M181978,EU081182, GU131942,FJ182007, EU081210,KF041257 ,EU081224,KJ189276 ,FJ639730,HQ166031 ,KF955487,EU08118 4,GU131844,EU4824 58,JN093513,JQ0456 88,JF920406,EU5296 96,FJ873812,AY8580 38,KF955472,GQ199 864,KJ189272,HQ54 1806,EU596492,DQ6 75529,FJ850109,KF9 55465,AY858040,FJ5 47075,FJ744700,EU5 69689,JF937641,FJ5 47082,EU687197,HQ 671177,FJ639804,AY 858045,HQ541797,K F824903,HQ705618, FJ639753,FJ390372, JF937629,GU131908, FJ639716,GU131865, JQ411814,FJ639790, KF041254,EU529684 ,KJ189301,HM18197 6,FJ639725,FJ89845 5,FJ639754,FJ63981 6,FJ639759,GQ8686 28,HQ332171,JQ920 483,FJ182008,AY858 039,EU081197,AY67 6353,DQ675524,FJ63 9799,AY744681,EU6 87233,KF955451,JF8 08129,HQ891025,FJ6 39727,EU081191,JF9 37652,HQ705612,FJ8 50111,FJ639787,HM 756279,JQ920489,H 0166030,FJ898440, GU131943,JF920395, FJ182011,FJ639782, AY858046,FJ850048, FJ639786,GU131916, HQ705614,EU687196 ,EU529697,JF920400 ,FJ639757,EU081207 ,FJ744736,KC425219 ,FJ373303,EU529685 ,KJ189297,EU081209 ,FJ639752,KF955453 ,FJ639749,EU726771 ,HQ166034,KF95550 7,DQ675521,FJQ2447 0,EU081185,KJ18925 7,JQ920481,FJQ2446 8,GU131854,EU3679 62,AY766104,FJ6397 19,FJ639722,EU5296 87,DQ675526,JF8081 25,FJQ24467,HQ5417 85,GU131918,GU131 945,GU131912,GU13 1946,HQ705620,HM7 56274,HM756278,FJ 850083,GQ868571,J N183884,EF629367, DQ401695,KF955454 ,FJ744738,EU660420 ,DQ401691,GU13191 4,AY744678,HQ6711 76,FJ461329,FJ6397 15,AY776329,FJ7447 30,FJ687448,KF9554 77,GU131851,FJ3733 04,KF955456,KJ1892 95,FJ639766,JF9204 03,FJ639781,DQ6755 30,JN368477,FJ8500 55,AY858048,HM181 973,FJ562100,FJ850 052,KF041255,JF808 123,GQ252674,EU68 7234,FJ639726,FJ63 9772,FJ410176,EU48 2555,GU131868,JF92 0394,JF937622,FJ47 8456,FJ639780,EU48 2462,FJ182010,KJ18 9284,KF955505,EUS 69688,AY648961,KF9 55468,GU131849,EU 081188,EU687226,G U131950,JF937628,J NO00938,KF955459,F J547080,FJ898442,F J182039,GU189648,F J547084,EU854292,K J189267,EU081216, GQ868616,EU08121 3,FJ639785,EF62936 6,FJ810413,JN40651 5,KJ189286,GU1319 40,EU529691,FJ1820 09,FJ639746,KJ1892 64,AY744680,FJ5470 71,FJQ24469,CS8053 42,FJ898473,GU1318 58,FJ744733,KF0412 59,FJ639765,FJ7447 39,JQ045687,EU529 689,FJ898471,FJ639 728,EU081211,EU78 1137,FJ639800,GQ1 99860,JN093514,AY6 76349,KF955460,EU 081218,FJ390373,KJ 189294,HM756280,K F041256,GQ868586, GU131906,KJ189279 ,GQ199888,JQ92047 9,EU081222,GU3635 49,AY496877,FJ6397 67,JN000937,DQ675 532,FJ410178,EU081 187,DQ675522,HQ54 1790,EU081199,GQ1 99871,GQ868634,FJ 882576,FJ547073,AF 317645,GU131910,FJ 898443,AY858037,JQ 920477,FJ639807,FJ 639771,FJ850110,AY 876494,KF955464,G U131909,HQ705616, FJ810414,HM756275 ,EU081193,AB21487 9,GU131935,AB1891 28,JF937627,FJ6397 91,JF920397,FJ6398 25,KF955462,FJ6397 75,GQ868573,FJ639 747,GQ199865,HM63 1856,FJ182004,FJO2 4471,EU081183,FJ54 7070,EU482456,EU7 26768,DQ401694,GU 131845,GU131875,FJ 744728,JF937642,JQ 045695,KJ189287,G U131936,JN406514,K F955474,HQ235027, KF955449,EU081217 ,KJ189275,KJ189281, FJ898447,FJ639810, FJ639712,EU081200, FJ850092,DQ401689, GQ868575,FJ639777 ,FJ882573,KF955486 ,FJ639729,FJ390371, HM181974,JN697379 ,FJ410177,DQ675533 ,AB189126,GU13191 7,GQ868576,HG3164 84,HQ541795 Dengue virus 4 NC_002640 vertebrates,invertebrates, 134 Flaviviridae,Flavivirus,Dengue virus FJ882587,FJQ24476, ,NC_00147 human FJ882589,AY618992, 5,NC_0014 EU854295,KF041260 74,NC_001 ,JQ513333,FJ639745 477 ,GQ199880,JQ51334 5,JN819409,AY61899 1,JQ513339,JN55974 0,JQ915087,FJ81041 7,JQ513332,JQ51333 7,FJ882581,JQ51334 0,JN819406,JQ51334 2,JF262780,FJ63973 6,FJ882583,GQ1998 79,GQ398256,GQ868 585,JQ513344,FJ882 595,JQ915089,FJ882 592,JQ513341,HQ33 2176,JQ915082,FJ63 9738,JQ513331,JQ51 3343,AF375822,EF45 7906,JXQ24758,FJ88 2585,FJQ24424,GQ8 68594,GQ868581,AY 947539,EU854297,G 0199885,FJ882591, GQ868579,FJ882598 ,EU854301,GQ86858 0,AY618990,FJ22606 7,HQ332172,JQ9150 84,AF326825,FJ8500 59,GQ199882,KC333 651,JQ513338,FJ639 744,GQ199884,AY85 8050,FJ882584,FJ63 9773,JQ513330,JF74 1967,FJ882588,FJ63 9737,JF262782,GQ8 68584,FJ882590,FJ8 50095,HQ332173,FJ8 82596,GQ868643,FJ 882600,GQ199883,G 0868583,FJ882580,F J639748,FJ882599,J 0915081,AY618993, GQ868644,AF289029 ,GQ252675,JQ91508 5,GQ199876,M14931 ,GQ868642,GQ86858 2,JN559741,JQ91508 6,FJ882582,JXQ2475 7,AF326827,EU8542 96,FJ639764,FJ1820 16,JF262779,GU2899 13,GQ199881,AF326 826,AY618988,FJ882 601,JQ513336,FJ850 058,GQ868645,EU85 4300,GQ199878,JF2 62783,JQ915088,HQ 332175,FJ639742,FJ 639739,JQ915090,AF 326573,JQ915083,FJ 850057,FJ182017,JQ 513334,FJ882586,AY 618989,FJ882597,JQ 513335,EU854299,JN 983813,JF262781,HQ 332174,AY776330,A Y762085 Donggang virus NC_016997 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Donggang virus — JQ086551 human Douglas virus NC_018461 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Sathuperi virus seg. L HE795090 human Douglas virus NC_018462 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Sathuperi virus seg. S HE795092 human Douglas virus NC_018466 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Sathuperi virus seg. M HE795091 human Duck Tembusu virus NC_015843 vertebrates,invertebrates, 6 Flaviviridae,Flavivirus,Tembusu virus — KC990541,KC990544 human ,KC990545,KC99054 3,KC990542,KC9905 40 Duck egg-drop syndrome NC_015843 vertebrates,invertebrates, 7 Flaviviridae,Flavivirus,Tembusu virus — JQ920426,JQ920421, virus human JQ920423,JQ920425, JQ920424,JQ920420, JQ920422 Duck flavivirus TA NC_015843 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Tembusu virus — JQ289550 human Dugbe virus NC_004157 vertebrates,invertebrates, 6 Bunyaviridae,Nairovirus,Dugbe virus seg. S M25150,AF434161,A human F434164,AF434163,A F434165,AF434162 Dugbe virus NC_004158 vertebrates,invertebrates, 1 Bunyaviridae,Nairovirus,Dugbe virus seg. M M94133 human Dugbe virus NC_004159 vertebrates,invertebrates, 1 Bunyaviridae,Nairovirus,Dugbe virus seg. L U15018 human Durania virus NC_015450 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. M HM566157 human Durania virus NC_015451 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. L HM566155 human Durania virus NC_015452 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. S HM566156 human Echarate virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119411 human Echarate virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119410 human Echarate virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119412 human Entebbe bat virus NC_008718 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Entebbe bat virus seg. S DQ837641,AY632537 human Eyach virus NC_003696 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 1 AF282467 human Eyach virus NC_003697 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 2 AF282468 human Eyach virus NC_003698 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 3 AF282469 human Eyach virus NC_003699 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 4 AF282470 human Eyach virus NC_003700 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 5 AF282471 human Eyach virus NC_003701 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 6 AF282472 human Eyach virus NC_003702 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 7 AF282473 human Eyach virus NC_003703 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 8 AF282474 human Eyach virus NC_003704 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. 9 AF282475 human Eyach virus NC_003705 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. AF282476 human 10 Eyach virus NC_003706 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. AF282477 human 11 Eyach virus NC_003707 vertebrates,invertebrates, 1 Reoviridae,Coltivirus,Eyach virus seg. AF282478 human 12 Flavivirus White Kaiya NC_015843 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Tembusu virus — JX196334 duck/WR/China/2010 human Flavivirus NC_015843 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Tembusu virus — JN232077 muscovy/SD/China/2011 human Fort Sherman virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S EU564829 human virus Germiston virus NC_001926 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. M M21951 human virus Grand Arbaud virus NC_005214 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. L JF838327 human Grand Arbaud virus NC_005220 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. M JF838328 human Great Island virus NC_014522 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 1 HM543465 human Great Island virus NC_014523 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 2 HM543466 human Great Island virus NC_014524 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 3 HM543467 human Great Island virus NC_014525 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 4 HM543468 human Great Island virus NC_014526 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 5 HM543469 human Great Island virus NC_014527 vertebrates,invertebrates, \1 Reoviridae,Orbivirus,Great Island virus seg. 6 HM543470 human Great Island virus NC_014528 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 7 HM543471 human Great Island virus NC_014529 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 8 HM543472 human Great Island virus NC_014530 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 9 HM543473 human Great Island virus NC_014531 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. HM543474 human 10 Hazara virus NC_005300 vertebrates,invertebrates, 1 Bunyaviridae,Nairovirus,Crimean-Congo seg. M DQ813514 human hemorrhagic fever virus Hazara virus NC_005301 vertebrates,invertebrates, 1 Bunyaviridae,Nairovirus,Crimean-Congo seg. L DQ076419 human hemorrhagic fever virus Hazara virus NC_005302 vertebrates,invertebrates, 1 Bunyaviridae,Nairovirus,Crimean-Congo seg. S M86624 human hemorrhagic fever virus Huaiyangshan virus NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L JF906056 human thrombocytopenia syndrome virus Huaiyangshan virus NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S JF906058 human thrombocytopenia syndrome virus Huaiyangshan virus NC_018138 vertebrates,invertebrates, 3 Bunyaviridae,Phlebovirus,Severe fever with seg. M JF951394,JF906057, human thrombocytopenia syndrome virus JF951393 Igbo Ora virus NC_001512 vertebrates,invertebrates, 1 Togaviridae,Alphavirus,O'nyong-nyong virus — AF079457 human Iguape virus NC_009026 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Aroa virus — AY632538 human Ilesha virus NC_001926 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. M AY859372 human virus Ilesha virus NC_001927 vertebrates,invertebrates, 3 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S AM709780,AM70977 human virus 9,AY729651 Ilheus virus NC_009028 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Ilheus virus KC481679,AY632539 human Inkoo virus NC_004108 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. L EU789573 human encephalitis virus Inkoo virus NC_004109 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,California seg. M U88059,U88060 human encephalitis virus Inkoo virus NC_004110 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,California seg. S U47137,U47138 human encephalitis virus Israel turkey NC_012534 vertebrates,invertebrates, 5 Flaviviridae,Flavivirus,Bagaza virus seg. M KC734553,KC734550 meningoencephalomyelitis human ,KC734552,KC73454 virus 9,KC734551 Itaituba virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119417 human Itaituba virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119416 human Itaituba virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119418 human Ixcanal virus NC_015450 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. M HM566163 human Ixcanal virus NC_015451 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. L HM566162 human Ixcanal virus NC_015452 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Aguacate virus seg. S HM566161 human Jacunda virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM466935 human Jacunda virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM466934 human Jacunda virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM466936 human Jamestown Canyon virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M U88058 human encephalitis virus Jamestown Canyon virus NC_004110 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. S U12796 human encephalitis virus Japanese encephalitis virus NC_001437 vertebrates,invertebrates, 171 Flaviviridae,Flavivirus,Japanese encephalitis — JN381857,JF706274, human virus AB551990,AF254452, JN381837,M18370,K F297915,JQ086763,J N381858,KC915016,J N381855,JN381861,J XQ72965,JF706281,J N381862,D90195,JF7 06278,FJ185037,JXQ 50179,U14163,AY849 939,JN381869,JN381 832,AB698906,AB69 8907,JF706269,AB05 1292,JN381849,JN38 1870,EF571853,JN38 1859,JF499790,JF70 6282,JN381831,M555 06,JN381851,JF7062 80,JN711458,AY5852 42,JN381844,GQ902 061,JN381863,AY303 798,JF706272,HQ652 538,AF075723,JF706 270,JF706283,AY508 813,JN381840,JN381 830,JN381850,AF221 500,AY303792,AB24 1118,AF254453,AB55 1991,AY508812,JN64 4310,AB241119,AF48 6638,AB830335,JN38 1864,JN381847,KF29 7916,HM228921,JF7 06284,AF315119,JF7 06277,JN381860,AF4 16457,AF069076,GU 205163,GQ918133,A F221499,JF706267,J N381833,JN381843,J N381871,JF706286,A B698905,JN381854,J N381873,JN381848,J F706275,FJ495189,A Y316157,EF623987,J F706268,HM366552, AF014161,GU556217 ,JN381834,JN381842 ,AY303794,JN381853 ,JF499788,JX131374, AF014160,HM596272 ,AY585243,JN711459 ,AF098735,AF045551 ,AF098737,GQ90205 9,AB196926,JN60498 6,AY303796,AF21762 0,AY303797,EF62398 8,JN381841,GQ9020 60,JN381856,JN3818 52,JF706273,JQ0867 62,JF706276,D90194 ,EU429297,AY30379 1,AB196925,KC5174 97,JN381866,JN8640 64,JF706279,AB5948 29,L48961,FJ185036, AB698908,JN381846, AB853904,AF080251, JF499789,JN381845, JN381867,AB196924, JN381872,HE861351, GQ902062,EF623989 ,EU880214,HQ89354 5,GQ199609,AY3037 93,JN381836,KC1961 15,JN381835,U15763 ,AB196923,EF543861 ,AB698909,EU69389 9,JF706271,JF70628 5,JN381838,L78128,J N381839,GU187972, AY303795,U47032,G 0902058,EF107523,J F915894,AB551992, GQ902063,JN381868 ,AY184212,JN381865 ,AF098736 Jerry Slough virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M AF123487 human encephalitis virus Kadipiro virus NC_004199 vertebrates,invertebrates, 2 Reoviridae,Seadornavirus,Kadipiro virus seg. AF019909,FJ159105 human 12 Kadipiro virus NC_004205 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. AF052019 human 11 Kadipiro virus NC_004206 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. AF052020 human 10 Kadipiro virus NC_004207 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 9 AF052021 human Kadipiro virus NC_004208 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 8 AF052022 human Kadipiro virus NC_004209 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 7 AF052023 human Kadipiro virus NC_004210 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 1 AF133429 human Kadipiro virus NC_004212 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 2 AF134509 human Kadipiro virus NC_004213 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 3 AF134510 human Kadipiro virus NC_004214 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 4 AF134511 human Kadipiro virus NC_004215 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 5 AF134512 human Kadipiro virus NC_004216 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Kadipiro virus seg. 6 AF134513 human Kama virus NC_023439 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Kama virus — KF815940 human Kamiti River virus NC_005064 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Kamiti River virus — AY149905,AY149904 human Karshi virus NC_006947 vertebrates,invertebrates, 3 Flaviviridae,Flavivirus,Royal Farm virus — DQ235147,AY863002 human ,DQ462443 Kedougou virus NC_012533 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Kedougou virus — AY632540 human Kemerovo virus NC_014522 vertebrates,invertebrates, 2 Reoviridae,Orbivirus,Great Island virus seg. 1 HQ266591,HM54348 human 1 Kemerovo virus NC_014523 vertebrates,invertebrates, 2 Reoviridae,Orbivirus,Great Island virus seg. 2 HQ266592,HM54348 human 2 Kemerovo virus NC_014524 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 3 HQ266593 human Kemerovo virus NC_014525 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 4 HQ266594 human Kemerovo virus NC_014526 vertebrates,invertebrates, 2 Reoviridae,Orbivirus,Great Island virus seg. 5 HQ266596,HQ26659 human 5 Kemerovo virus NC_014527 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 6 HM543483 human Kemerovo virus NC_014528 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 7 HQ266597 human Kemerovo virus NC_014529 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 8 HQ266598 human Kemerovo virus NC_014530 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 9 HQ266599 human Kemerovo virus NC_014531 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. HQ266600 human 10 Keystone virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M AF123489 human encephalitis virus Keystone virus NC_004110 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. S U12801 human encephalitis virus Kokobera virus NC_009029 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Kokobera virus — AY632541 human Kunjin virus NC_001563 vertebrates,invertebrates, 3 Flaviviridae,Flavivirus,West Nile virus — DQ0246,AY274505,A human Y274504 Kunjin virus NC_009942 vertebrates,invertebrates, 3 Flaviviridae,Flavivirus,West Nile virus — DQ0246,AY274505,A human Y274504 Kyasanur forest disease NC_004355 vertebrates,invertebrates, 6 Flaviviridae,Flavivirus,Kyasanur forest disease — EU480689,JF416960, virus human virus AY323490,JF416959, JF416958,HM055369 La Crosse virus NC_004108 vertebrates,invertebrates, 7 Bunyaviridae,Orthobunyavirus,California seg. L AF525489,EF485038, human encephalitis virus EF485035,AF528165, U12396,EF485032, D 0196118 La Crosse virus NC_004109 vertebrates,invertebrates, 13 Bunyaviridae,Orthobunyavirus,California seg. M EF485031,DQ196119 human encephalitis virus ,U70207,EF485037,U 70205,U 18980,U 7020 8,EF485034,M87664, D10370,U70206,U18 979,AF528166 La Crosse virus NC_004110 vertebrates,invertebrates, 7 Bunyaviridae,Orthobunyavirus,California seg. S DQ196120,EF485030 human encephalitis virus ,EF485036,AF528167 ,K00610,EF485033,K 00108 Langat virus NC_003690 vertebrates,invertebrates, 3 Flaviviridae,Flavivirus,Langat virus — EU790644,AF253420 human ,AF253419 Liao ning virus NC_007736 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 1 AY701339 human Liao ning virus NC_007737 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 2 AY701340 human Liao ning virus NC_007738 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 3 AY701341 human Liao ning virus NC_007739 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 4 AY701342 human Liao ning virus NC_007740 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 5 AY701343 human Liao ning virus NC_007741 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 6 AY701344 human Liao ning virus NC_007742 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 7 AY701345 human Liao ning virus NC_007743 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 8 AY701346 human Liao ning virus NC_007744 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. 9 AY701347 human Liao ning virus NC_007745 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. AY701348 human 10 Liao ning virus NC_007746 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. AY701349 human 11 Liao ning virus NC_007747 vertebrates,invertebrates, 1 Reoviridae,Seadornavirus,Liao ning virus seg. AY701350 human 12 Lipovnik virus NC_014522 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 1 HM543475 human Lipovnik virus NC_014523 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 2 HM543476 human Louping ill virus NC_001809 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Louping ill virus — Y07863,KF056331 human Lumbo virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M AF123484 human encephalitis virus Lumbo virus NC_004110 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. S X73468 human encephalitis virus Maguari virus NC_001926 vertebrates,invertebrates, 4 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. M AY286444,AY286443 human virus ,AY286445,AY28644 6 Maldonado virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119414 human Maldonado virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119413 human Maldonado virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119415 human Massilia virus NC_006318 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Sandfly fever seg. S EU725773 human Naples virus Massilia virus NC_006319 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Sandfly fever seg. L EU725771 human Naples virus Massilia virus NC_006320 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Sandfly fever seg. M EU725772 human Naples virus Mayaro virus NC_003417 vertebrates,invertebrates, 2 Togaviridae,Alphavirus,Mayaro virus — DQ001069,AF237947 human Mboke virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S AY593727 human virus Melao virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M U88057 human encephalitis virus Modoc virus NC_003635 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Modoc virus — AJ242984 human Montana myotis NC_004119 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Montana myotis — AJ299445 leukoencephalitis virus human leukoencephalitis virus Morro Bay virus NC_004110 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. S U31989 human encephalitis virus Morumbi virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119423 human Morumbi virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119422 human Morumbi virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119424 human Mosquito flavivirus NC_021069 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Mosquito flavivirus — KC464457 human Mucura virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119420 human Mucura virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119419 human Mucura virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119421 human Murray Valley encephalitis NC_000943 vertebrates,invertebrates, 10 Flaviviridae,Flavivirus,Murray Valley — KC852193,JX123032, virus human encephalitis virus AF161266,KC852192 ,KC852194,KC85219 5,KC852189,KC8521 90,KC852191,KC852 196 Murre virus NC_005214 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. L JF838330 human Murre virus NC_005220 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. M JF838331 human Ngari virus NC_001926 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. M AY593725 human virus Ngari virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S AY593729 human virus Nique virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119426 human Nique virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119425 human Nique virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119427 human Northway virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S X73470 human virus Ntaya virus NC_018705 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Ntaya virus — JX236040 human O'nyong-nyong virus NC_001512 vertebrates,invertebrates, 2 Togaviridae,Alphavirus,O'nyong-nyong virus — AF079456,M20303 human Omsk hemorrhagic fever NC_005062 vertebrates,invertebrates, 4 Flaviviridae,Flavivirus,Omsk hemorrhagic — AY323489,AB507800 virus human fever virus ,AY438626,AY19380 5 Oriximina virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119435 human Oriximina virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119434 human Oriximina virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119436 human Oropouche virus NC_005775 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,Oropouche seg. M AF312381,AF441119 human virus Oropouche virus NC_005776 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Oropouche seg. L AF484424 human virus Oropouche virus NC_005777 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,Oropouche seg. S AY237111,AY117135 human virus Orthobunyavirus BX- NC_018136 vertebrates,invertebrates, 3 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ642766,JF682773, 2010/Henan/CHN human thrombocytopenia syndrome virus JF682776 Orthobunyavirus BX- NC_018137 vertebrates,invertebrates, 3 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ642768,JF682778, 2010/Henan/CHN human thrombocytopenia syndrome virus JF682775 Orthobunyavirus BX- NC_018138 vertebrates,invertebrates, 3 Bunyaviridae,Phlebovirus,Severe fever with seg. M JF682774,JF682777, 2010/Henan/CHN human thrombocytopenia syndrome virus HQ642767 Peaton virus NC_018463 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. L HE795093 human virus Peaton virus NC_018464 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. S HE795095 human virus Peaton virus NC_018467 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. M HE795094 human virus Phlebovirus J52007-01 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L JF837593 human thrombocytopenia syndrome virus Phlebovirus J52007-01 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M JF837594 human thrombocytopenia syndrome virus Phlebovirus J52010-014 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L JQ317169 human thrombocytopenia syndrome virus Phlebovirus J52010-014 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S JQ317171 human thrombocytopenia syndrome virus Phlebovirus J52010-014 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M JQ317170 human thrombocytopenia syndrome virus Phlebovirus J52010-015 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L JQ317172 human thrombocytopenia syndrome virus Phlebovirus J52010-015 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S JQ317174 human thrombocytopenia syndrome virus Phlebovirus J52010-015 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M JQ317173 human thrombocytopenia syndrome virus Phlebovirus J52010-018 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L JQ317175 human thrombocytopenia syndrome virus Phlebovirus JS2010-018 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S JQ317177 human thrombocytopenia syndrome virus Phlebovirus JS2010-018 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M JQ317176 human thrombocytopenia syndrome virus Phlebovirus JS2010-019 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L JQ317178 human thrombocytopenia syndrome virus Phlebovirus JS2010-019 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S JQ317180 human thrombocytopenia syndrome virus Phlebovirus JS2010-019 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M JQ317179 human thrombocytopenia syndrome virus Phlebovirus JS24 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ830163 human thrombocytopenia syndrome virus Phlebovirus JS24 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ830165 human thrombocytopenia syndrome virus Phlebovirus JS24 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ830164 human thrombocytopenia syndrome virus Phlebovirus JS26 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ830166 human thrombocytopenia syndrome virus Phlebovirus JS26 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ830168 human thrombocytopenia syndrome virus Phlebovirus JS26 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ830167 human thrombocytopenia syndrome virus Phlebovirus JS6 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ830169 human thrombocytopenia syndrome virus Phlebovirus JS6 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ830171 human thrombocytopenia syndrome virus Phlebovirus JS6 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ830170 human thrombocytopenia syndrome virus Powassan virus NC_003687 vertebrates,invertebrates, 12 Flaviviridae,Flavivirus,Powassan virus — HM440560,HM44056 human 3,HM440559,HM4405 58,HQ231415,EU770 575,EU543649,L0643 6,HQ231414,HM4405 62,HM440561,EU670 438 Precarious point virus NC_005214 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. L HM566181 human Precarious point virus NC_005220 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. M HM566179 human Precarious point virus NC_005221 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. S HM566180 human Quang Binh virus NC_012671 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Quang Binh virus — FJ644291 human RML-105355 virus NC_005214 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. L JF838333 human RML-105355 virus NC_005220 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. M JF838334 human Razdan virus NC_022630 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Razdan virus seg. L KC335496 human Razdan virus NC_022631 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Razdan virus seg. M KC335497 human Razdan virus NC_022632 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Razdan virus seg. S KC335498 human Rift Valley fever virus NC_014395 vertebrates,invertebrates, 50 Bunyaviridae,Phlebovirus,Rift Valley fever seg. S DQ380155,DQ38015 human virus 9,DQ380143,DQ3801 50,JF311390,DQ3801 74,DQ380161,DQ380 158,DQ380182,DQ38 0171,DQ380170,JF31 1389,JF311393,DQ38 0178,JF311394,JF31 1388,DQ380172,DQ3 80169,DQ380145,DQ 380163,DQ380144,D Q380147,JF311387,D Q380152,DQ380165, DQ380149,DQ38014 6,DQ380168,DQ3801 60,DQ380154,DQ380 175,DQ380173,DQ38 0181,DQ380148,DQ3 80176,DQ380156,DQ 380153,JF311391,JF 311392,DQ380164,JF 311386,X53771,DQ3 80179,DQ380162,DQ 380157,DQ380151,D 0380177,DQ380180, DQ380166,DQ38016 7 Rift Valley fever virus NC_014396 vertebrates,invertebrates, 56 Bunyaviridae,Phlebovirus,Rift Valley fever seg. M DQ380204,DQ38020 human virus 9,JF311382,JF31137 9,JF311384,DQ38018 9,DQ380203,DQ3801 98,DQ380220,DQ380 206,DQ380195,DQ38 0184,JF311385,DQ38 0202,DQ380188,M25 276,DQ380196,JF309 200,DQ380208,DQ38 0218,DQ380185,JF31 1377,JF311381,DQ38 0193,DQ380214,DQ3 80187,JF311380,DQ3 80186,DQ380190,JF3 11378,DQ380197,DQ 380199,DQ380200,D 0380183,M11157,DQ 380219,DQ380221,D 0380210,DQ380215, DQ380201,DQ38021 6,DQ380207,JF31138 3,DQ380211,EF4671 77,DQ3801 94,DQ380 212,DQ380192,DQ38 0222,DQ380191,EF4 67178,DQ380217,EF 460404,HQ00951 2,D 0380213,DQ380205 Rift Valley fever virus NC_014397 vertebrates,invertebrates, 50 Bunyaviridae,Phlebovirus,Rift Valley fever seg. L DQ375400,DQ37542 human virus 6,DQ375421,DQ3754 07,DQ375431,DQ375 398,DQ375397,JF311 371,JF311373,DQ375 419,DQ375409,DQ37 5399,JF311368,DQ37 5406,DQ375403,DQ3 75410,DQ375429,DQ 375414,JF311375,DQ 375401,DQ375417,D 0375425,JF311369,D 0375420,DQ375424, DQ375395,DQ37541 5,DQ375432,DQ3754 22,DQ375412,DQ375 418,X56464,DQ3754 05,DQ375423,DQ375 413,DQ375427,DQ37 5434,JF311376,JF31 1372,DQ375408,DQ3 75396,JF311370,JF3 11374,DQ375433,DQ 375416,DQ375404,D 0375411,DQ375428, DQ375402,DQ37543 0 Rio Bravo virus NC_003675 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Rio Bravo virus — JQ582840,AF144692 human Rocio virus NC_009028 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Ilheus virus — AY632542 human Ross River virus NC_001544 vertebrates,invertebrates, 9 Togaviridae,Alphavirus,Ross River virus — GQ433355,GQ43335 human 7,GQ433359,GQ4333 54,GQ433356,DQ226 993,GQ433360,M201 62,GQ433358 Royal Farm virus NC_006947 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Royal Farm virus — DQ235149 human SFTS virus AH12 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ116417 human thrombocytopenia syndrome virus SFTS virus AH12 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ141591 human thrombocytopenia syndrome virus SFTS virus AH12 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ141590 human thrombocytopenia syndrome virus SFTS virus AH15 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ141592 human thrombocytopenia syndrome virus SFTS virus AH15 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ141594 human thrombocytopenia syndrome virus SFTS virus AH15 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ141593 human thrombocytopenia syndrome virus SFTS virus HB29 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HM745930 human thrombocytopenia syndrome virus SFTS virus HB29 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HM745932 human thrombocytopenia syndrome virus SFTS virus HB29 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HM745931 human thrombocytopenia syndrome virus SFTS virus HN13 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ141598 human thrombocytopenia syndrome virus SFTS virus HN13 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ141600 human thrombocytopenia syndrome virus SFTS virus HN13 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ141599 human thrombocytopenia syndrome virus SFTS virus HN6 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ141595 human thrombocytopenia syndrome virus SFTS virus HN6 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ141597 human thrombocytopenia syndrome virus SFTS virus HN6 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ141596 human thrombocytopenia syndrome virus SFTS virus HNXY_115 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292338 human thrombocytopenia syndrome virus SFTS virus HNXY_115 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292285 human thrombocytopenia syndrome virus SFTS virus HNXY_115 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292312 human thrombocytopenia syndrome virus SFTS virus HNXY_130 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292342 human thrombocytopenia syndrome virus SFTS virus HNXY_130 NC_018137 vertebrates,invertebrates/ 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292289 human thrombocytopenia syndrome virus SFTS virus HNXY_130 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292316 human thrombocytopenia syndrome virus SFTS virus HNXY_144 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292333 human thrombocytopenia syndrome virus SFTS virus HNXY_144 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292280 human thrombocytopenia syndrome virus SFTS virus HNXY_144 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292307 human thrombocytopenia syndrome virus SFTS virus HNXY_157 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292331 human thrombocytopenia syndrome virus SFTS virus HNXY_157 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292278 human thrombocytopenia syndrome virus SFTS virus HNXY_157 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292305 human thrombocytopenia syndrome virus SFTS virus HNXY_164 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292340 human thrombocytopenia syndrome virus SFTS virus HNXY_164 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292287 human thrombocytopenia syndrome virus SFTS virus HNXY_164 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292314 human thrombocytopenia syndrome virus SFTS virus HNXY_170 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292353 human thrombocytopenia syndrome virus SFTS virus HNXY_170 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292277 human thrombocytopenia syndrome virus SFTS virus HNXY_170 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292304 human thrombocytopenia syndrome virus SFTS virus HNXY_174 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292332 human thrombocytopenia syndrome virus SFTS virus HNXY_174 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292279 human thrombocytopenia syndrome virus SFTS virus HNXY_174 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292306 human thrombocytopenia syndrome virus SFTS virus HNXY_182 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292350 human thrombocytopenia syndrome virus SFTS virus HNXY_182 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292297 human thrombocytopenia syndrome virus SFTS virus HNXY_182 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292324 human thrombocytopenia syndrome virus SFTS virus HNXY_186 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292334 human thrombocytopenia syndrome virus SFTS virus HNXY_186 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292281 human thrombocytopenia syndrome virus SFTS virus HNXY_186 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292308 human thrombocytopenia syndrome virus SFTS virus HNXY_188 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292328 human thrombocytopenia syndrome virus SFTS virus HNXY_188 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292274 human thrombocytopenia syndrome virus SFTS virus HNXY_188 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292301 human thrombocytopenia syndrome virus SFTS virus HNXY_191 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292349 human thrombocytopenia syndrome virus SFTS virus HNXY_191 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292296 human thrombocytopenia syndrome virus SFTS virus HNXY_191 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292323 human thrombocytopenia syndrome virus SFTS virus HNXY_195 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292352 human thrombocytopenia syndrome virus SFTS virus HNXY_195 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292299 human thrombocytopenia syndrome virus SFTS virus HNXY_195 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292326 human thrombocytopenia syndrome virus SFTS virus HNXY_2 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292344 human thrombocytopenia syndrome virus SFTS virus HNXY_2 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292291 human thrombocytopenia syndrome virus SFTS virus HNXY_2 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292318 human thrombocytopenia syndrome virus SFTS virus HNXY_202 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292351 human thrombocytopenia syndrome virus SFTS virus HNXY_202 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292298 human thrombocytopenia syndrome virus SFTS virus HNXY_202 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292325 human thrombocytopenia syndrome virus SFTS virus HNXY_206 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292329 human thrombocytopenia syndrome virus SFTS virus HNXY_206 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292275 human thrombocytopenia syndrome virus SFTS virus HNXY_206 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292302 human thrombocytopenia syndrome virus SFTS virus HNXY_207 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292341 human thrombocytopenia syndrome virus SFTS virus HNXY_207 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292288 human thrombocytopenia syndrome virus SFTS virus HNXY_207 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292315 human thrombocytopenia syndrome virus SFTS virus HNXY_212 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292327 human thrombocytopenia syndrome virus SFTS virus HNXY_212 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292273 human thrombocytopenia syndrome virus SFTS virus HNXY_212 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292300 human thrombocytopenia syndrome virus SFTS virus HNXY_224 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292343 human thrombocytopenia syndrome virus SFTS virus HNXY_224 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292290 human thrombocytopenia syndrome virus SFTS virus HNXY_224 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292317 human thrombocytopenia syndrome virus SFTS virus HNXY_231 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292339 human thrombocytopenia syndrome virus SFTS virus HNXY_231 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292286 human thrombocytopenia syndrome virus SFTS virus HNXY_231 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292313 human thrombocytopenia syndrome virus SFTS virus HNXY_245 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292346 human thrombocytopenia syndrome virus SFTS virus HNXY_245 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292293 human thrombocytopenia syndrome virus SFTS virus HNXY_245 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292320 human thrombocytopenia syndrome virus SFTS virus HNXY_262 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292335 human thrombocytopenia syndrome virus SFTS virus HNXY_262 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292282 human thrombocytopenia syndrome virus SFTS virus HNXY_262 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292309 human thrombocytopenia syndrome virus SFTS virus HNXY_278 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292348 human thrombocytopenia syndrome virus SFTS virus HNXY_278 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292295 human thrombocytopenia syndrome virus SFTS virus HNXY_278 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292322 human thrombocytopenia syndrome virus SFTS virus HNXY_293 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292330 human thrombocytopenia syndrome virus SFTS virus HNXY_293 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292276 human thrombocytopenia syndrome virus SFTS virus HNXY_293 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292303 human thrombocytopenia syndrome virus SFTS virus HNXY_31 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292336 human thrombocytopenia syndrome virus SFTS virus HNXY_31 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292283 human thrombocytopenia syndrome virus SFTS virus HNXY_31 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292310 human thrombocytopenia syndrome virus SFTS virus HNXY_319 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292345 human thrombocytopenia syndrome virus SFTS virus HNXY_319 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292292 human thrombocytopenia syndrome virus SFTS virus HNXY_319 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292319 human thrombocytopenia syndrome virus SFTS virus HNXY_327 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292347 human thrombocytopenia syndrome virus SFTS virus HNXY_327 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292294 human thrombocytopenia syndrome virus SFTS virus HNXY_327 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292321 human thrombocytopenia syndrome virus SFTS virus HNXY_93 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC292337 human thrombocytopenia syndrome virus SFTS virus HNXY_93 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S KC292284 human thrombocytopenia syndrome virus SFTS virus HNXY_93 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC292311 human thrombocytopenia syndrome virus SFTS virus JS3 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ141601 human thrombocytopenia syndrome virus SFTS virus JS3 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ141603 human thrombocytopenia syndrome virus SFTS virus JS3 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ141602 human thrombocytopenia syndrome virus SFTS virus JS4 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ141604 human thrombocytopenia syndrome virus SFTS virus JS4 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ141606 human thrombocytopenia syndrome virus SFTS virus JS4 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ141605 human thrombocytopenia syndrome virus SFTS virus LN2 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ141607 human thrombocytopenia syndrome virus SFTS virus LN2 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ141609 human thrombocytopenia syndrome virus SFTS virus LN2 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ141608 human thrombocytopenia syndrome virus SFTS virus LN3 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HQ141610 human thrombocytopenia syndrome virus SFTS virus LN3 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HQ141612 human thrombocytopenia syndrome virus SFTS virus LN3 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HQ141611 human thrombocytopenia syndrome virus SFTS virus SD24 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HM802200 human thrombocytopenia syndrome virus SFTS virus SD24 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HM802205 human thrombocytopenia syndrome virus SFTS virus SD24 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HM802201 human thrombocytopenia syndrome virus SFTS virus SD4 NC_018136 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. L HM802202 human thrombocytopenia syndrome virus SFTS virus SD4 NC_018137 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. S HM802204 human thrombocytopenia syndrome virus SFTS virus SD4 NC_018138 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Severe fever with seg. M HM802203 human thrombocytopenia syndrome virus Sabo virus NC_009894 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Akabane virus seg. L HE795096 human Sabo virus NC_009895 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Akabane virus seg. M HE795097 human Sabo virus NC_009896 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Akabane virus seg. S HE795098 human Sagiyama virus NC_001544 vertebrates,invertebrates, 1 Togaviridae,Alphavirus,Ross River virus — AB032553 human San Angelo virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M AF123486 human encephalitis virus San Angelo virus NC_004110 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. S U47139 human encephalitis virus Sand fever Naples-like NC_006318 vertebrates,invertebrates, 2 Bunyaviridae,Phlebovirus,Sandfly fever seg. S HM566182,HM56617 virus human Naples virus 8 Sand fever Naples-like NC_006319 vertebrates,invertebrates, 2 Bunyaviridae,Phlebovirus,Sandfly fever seg. L HM566176,HM56618 virus human Naples virus 3 Sand fever Naples-like NC_006320 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Sandfly fever seg. M HM566177 virus human Naples virus Sandfly Sicilian Turkey NC_015411 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Sandfly fever seg. M GQ847512 virus human Sicilian virus Sandfly Sicilian Turkey NC_015412 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Sandfly fever seg. L GQ847513 virus human Sicilian virus Sandfly Sicilian Turkey NC_015413 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Sandfly fever seg. S GQ847511 virus human Sicilian virus Sandfly fever Naples virus NC_006318 vertebrates,invertebrates, 8 Bunyaviridae,Phlebovirus,Sandfly fever seg. S EF201831,HM566170 human Naples virus ,HM566168,EF20182 8,EF201832,X53794, EF201829,EF201830 Sandfly fever Naples virus NC_006319 vertebrates,invertebrates, 3 Bunyaviridae,Phlebovirus,Sandfly fever seg. L HM566172,X68414,H human Naples virus M566167 Sandfly fever Naples virus NC_006320 vertebrates,invertebrates, 3 Bunyaviridae,Phlebovirus,Sandfly fever seg. M HM566171,HM56616 human Naples virus 9,X89628 Sandfly fever sicilian virus NC_015411 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Sandfly fever seg. M U30500 human Sicilian virus Sandfly fever sicilian virus NC_015413 vertebrates,invertebrates, 9 Bunyaviridae,Phlebovirus,Sandfly fever seg. S EF201826,AJ811547, human Sicilian virus EF201825,EF201822, JQ4418,EF201824,EF 201823,EF201827,G U119908 Sango virus NC_018463 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. L HE795099 human virus Sango virus NC_018464 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. S HE795101 human virus Sango virus NC_018467 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. M HE795100 human virus Sathuperi virus NC_018461 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Sathuperi virus seg. L HE795102 human Sathuperi virus NC_018462 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Sathuperi virus seg. S HE795104 human Sathuperi virus NC_018466 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Sathuperi virus seg. M HE795103 human Sepik virus NC_008719 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Sepik virus — DQ837642,AY632543 human Serra Norte virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119429 human Serra Norte virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119428 human Serra Norte virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119430 human Serra do Navio virus NC_004110 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. S U47140 human encephalitis virus Severe fever with NC_018136 vertebrates,invertebrates, 24 Bunyaviridae,Phlebovirus,Severe fever with seg. L KC505123,JQ733561 thrombocytopenia human thrombocytopenia syndrome virus ,KC505126,AB81798 syndrome virus 5,AB817984,JQ73356 4,JQ733567,JQ67093 4,KC505129,AB8179 83,KC473540,JQ684 871,KC505135,KC50 5132,AB817982,AB8 17979,AB817981,KC 505138,JQ670929,K C505141,AB817980, KC505144,KC473537 ,AB817986 Severe fever with NC_018137 vertebrates,invertebrates, 36 Bunyaviridae,Phlebovirus,Severe fever with seg. S AB817997,KC505131 thrombocytopenia human thrombocytopenia syndrome virus ,JQ693005,JQ693008 syndrome virus ,AB817996,KC50513 4,JQ670933,AB81800 2,KC505146,JQ6930 06,KC473539,JQ670 932,KC505140,KC50 5125,JQ733565,JQ69 3007,AB817998,JQ73 3562,AB818000,JQ73 3568,KC473542,JQ6 93010,AB817995,AB 818001,JQ693011,JQ 693002,KC505128,J 0693009,KC505143, JQ693003,JQ693001, JQ693012,AB817999, JQ684873,JQ693004, JQ693013 Severe fever with NC_018138 vertebrates,invertebrates, 24 Bunyaviridae,Phlebovirus,Severe fever with seg. M KC473538,KC505136 thrombocytopenia human thrombocytopenia syndrome virus ,KC505145,JQ73356 syndrome virus 6,KC473541,KC5051 39,AB817992,AB817 994,JQ670930,AB817 990,AB817988,KC50 5142,AB817993,AB8 17989,JQ684872,JQ7 33563,KC505127,KC 505130,JQ733560,AB 817987,AB817991,K C505133,KC505124,J 0670931 Shamonda virus NC_018463 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. L HE795105 human virus Shamonda virus NC_018464 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. S HE795107 human virus Shamonda virus NC_018467 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Shamonda seg. M HE795106 human virus Shokwe virus NC_001927 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Bunyamwera seg. S EU564831 human virus Simbu virus NC_018476 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Simbu virus seg. L HE795108 human Simbu virus NC_018477 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Simbu virus seg. S HE795110 human Simbu virus NC_018478 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Simbu virus seg. M HE795109 human Sitiawan virus NC_015843 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Tembusu virus — JX477686 human Snowshoe hare virus NC_004108 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. L EU203678 human encephalitis virus Snowshoe hare virus NC_004109 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,California seg. M K02539,EU262553 human encephalitis virus Snowshoe hare virus NC_004110 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,California seg. S EU294510,JQ2390 human encephalitis virus South River virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M AF123488 human encephalitis virus St,Louis encephalitis virus NC_007580 vertebrates,invertebrates, 9 Flaviviridae,Flavivirus,St,Louis encephalitis — JQ957868,FJ753287, human virus FJ753286,JF460774, DQ359217,JQ957869 ,EU566860,AY63254 4,DQ525916 Tahyna virus NC_004109 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,California seg. M AF123485,AF229129 human encephalitis virus Tahyna virus NC_004110 vertebrates,invertebrates, 2 Bunyaviridae,Orthobunyavirus,California seg. S U47142,Z68497 human encephalitis virus Tamana bat virus NC_003996 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Tamana bat virus — AF285080,AF346759 human Tembusu virus NC_015843 vertebrates,invertebrates, 18 Flaviviridae,Flavivirus,Tembusu virus — KF557894,KF192951, human JQ595407,JX477685, JQ314464,JF895923, KC333867,JX549382, JX965381,JQ928189, JN811558,JX273153, JF270480,JF459991, JQ314465,KF557893, KC136210,JN811559 Thogoto virus NC_006495 vertebrates,invertebrates, 1 Orthomyxoviridae,Thogotovirus,Thogoto virus seg. 2 AF004985 human Thogoto virus NC_006496 vertebrates,invertebrates, 2 Orthomyxoviridae,Thogotovirus,Thogoto virus seg. 3 AF006073,DQ0540 human Thogoto virus NC_006504 vertebrates,invertebrates, 4 Orthomyxoviridae,Thogotovirus,Thogoto virus seg. 6 AF527531,AF527529, human AF236794,AF527530 Thogoto virus NC_006506 vertebrates,invertebrates, 1 Orthomyxoviridae,Thogotovirus,Thogoto virus seg. 4 M77280 human Thogoto virus NC_006507 vertebrates,invertebrates, 1 Orthomyxoviridae,Thogotovirus,Thogoto virus seg. 5 X96872 human Thogoto virus NC_006508 vertebrates,invertebrates, 1 Orthomyxoviridae,Thogotovirus,Thogoto virus seg. 1 Y17873 human Tick-borne encephalitis NC_001672 vertebrates,invertebrates, 78 Flaviviridae,Flavivirus,Tick-borne encephalitis — JQ825149,FJ402886, virus human virus EU816454,EU816452 ,JQ825163,JF316707 ,GQ228395,EU81645 3,U27495,KC422663, EU816451,JQ825160 ,FJ572210,GU183383 ,KC414090,JQ82515 0,AY169390,AF52741 5,JQ654701,HM1208 75,HM535611,JN229 223,JQ650522,FJ968 751,GU183379,JQ82 5161,AB062064,HQ9 01366,EF469661,EF4 69662,JF316708,FJ4 02885,KC835596,FJ9 06622,JQ825146,GQ 266392,JX534167,FJ 997899,JQ825152,K C422667,GU121642, EU816450,L40361,K C835595,JQ825147, AB062063,HM859895 ,AB753012,JQ825151 ,JQ825145,JQ825144 ,DQ401140,JQ82514 8,JQ650523,U39292, JQ825159,GU183381 ,KF151173,JQ825164 ,HM535610,JQ82516 2,KC835597,JN00320 7,HQ201303,JQ8251 56,JQ825158,AF0690 66,AY182009,JQ8251 53,JQ825157,HM859 894,JQ825154,EU81 6455,U27491,JQ8251 55,GU183380,JF8196 48,HQ901367 Tinaroo virus NC_009895 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Akabane virus seg. M AB208700 human Tinaroo virus NC_009896 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Akabane virus seg. S AB000819 human Toscana virus NC_006318 vertebrates,invertebrates, 9 Bunyaviridae,Phlebovirus,Sandfly fever seg. S EU327772,EF120631 human Naples virus ,EF201833,JF330274 ,KC776214,JF330275 ,JX867536,FJ153285, FJ153286 Toscana virus NC_006319 vertebrates,invertebrates, 2 Bunyaviridae,Phlebovirus,Sandfly fever seg. L JX867534,KC776216 human Naples virus Toscana virus NC_006320 vertebrates,invertebrates, 12 Bunyaviridae,Phlebovirus,Sandfly fever seg. M JF330280,EU003178, human Naples virus EU003175,EU003179 ,EU003180,EU00317 7,EU003174,JF33027 9,EU003176,KC7762 15,EU003173,JX8675 35 Tribec virus NC_014522 vertebrates,invertebrates,, 2 Reoviridae,Orbivirus,Great Island virus seg. 1 HQ266581,HM54347 human 8 Tribec virus NC_014523 vertebrates,invertebrates, 2 Reoviridae,Orbivirus,Great Island virus seg. 2 HQ266582,HM54347 human 9 Tribec virus NC_014524 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 3 HQ266583 human Tribec virus NC_014525 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 4 HQ266584 human Tribec virus NC_014526 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 5 HQ266585 human Tribec virus NC_014527 vertebrates,invertebrates, 2 Reoviridae,Orbivirus,Great Island virus seg. 6 HM543480,HQ26658 human 6 Tribec virus NC_014528 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 7 HQ266587 human Tribec virus NC_014529 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 8 HQ266588 human Tribec virus NC_014530 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. 9 HQ266589 human Tribec virus NC_014531 vertebrates,invertebrates, 1 Reoviridae,Orbivirus,Great Island virus seg. HQ266590 human 10 Trivittatus virus NC_004109 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. M AF123491 human encephalitis virus Trivittatus virus NC_004110 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,California seg. S U12803 human encephalitis virus Turuna virus NC_015373 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. M HM119432 human Turuna virus NC_015374 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. L HM119431 human Turuna virus NC_015375 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Candiru virus seg. S HM119433 human Tyuleniy virus NC_023424 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Tyuleniy virus KF815939 human Usutu virus NC_006551 vertebrates,invertebrates, 10 Flaviviridae,Flavivirus,Usutu virus KC754957,EF206350 human ,KC754955,JF266698 ,KC754958,AY45341 1,AY453412,JQ21984 3,KC754954,KC7549 56 Uukuniemi virus NC_005214 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. L D10759 human Uukuniemi virus NC_005220 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. M M17417 human Uukuniemi virus NC_005221 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. S M33551 human Wesselsbron virus NC_012735 vertebrates,invertebrates, 2 Flaviviridae,Flavivirus,Wesselsbron virus — EU707555,JN226796 human West Nile virus NC_001563 vertebrates,invertebrates, 681 Flaviviridae,Flavivirus,West Nile virus — JN819317,FJ425721, human HQ671721,JN858069 ,DQ080059,HQ67169 9,HM488219,JX5030 87,GQ507482,JF899 537,CS568918,JX503 084,HM488220,HM48 8126,DQ080062,DQ4 31701,JF957169,JF9 20749,EU068667,DQ 164187,JQ928174,H M488211,JF920754,J F415922,KF647249,J F957167,HQ671688, DQ080070,JF957180, JF357960,JF899530, KF588365,JF920746, JF415927,HQ671670, DQ411030,AF196835 ,JF488096,HM48820 1,HQ671673,JF48808 7,HM488165,AF4047 56,GQ379156,JF730 043,HM488173,JF48 8086,HQ671718,HQ6 71720,KC736498,HM 488129,KC736486,M 12294,JF415919,HM 488181,AY262283,JF 920752,HQ671679,JF 920759,KC711059,H M488132,GQ903680, KC711057,GQ37915 8,HM756672,JF9571 62,DQ080067,JF9207 33,HM488156,DQ431 712,HM488135,JN81 9311,HM756649,HM4 88160,HQ705670,JF8 99534,JN819319,JF9 57182,JF920307,DQ4 31693,KC736493,HM 756656,JX503092,H M488235,HM756663, JN183885,JF415930, JN819323,JXQ41628, HM756664,HM75665 1,DQ080069,JF41592 6,JQ700439,HM4881 79,JF957185,KC7364 89,KJ145832,HM488 209,DQ411035,AB18 5916,JXQ15520,HQ6 71722,JF920747,HM 488207,HQ705671,H M488170,GQ379161, KC736487,HM48825 0,DQ374653,JF92073 8,JN819320,HQ6716 96,DQ411032,HQ671 700,HM488164,HQ67 1707,HQ671687,GQ5 07473,KC736492,DQ 080065,HQ705674,JF 415918,JX503093,H M488233,HM488218, AY795965,HQ671692 ,HM488172,DQ37717 8,FJ151394,HM7566 57,AF260967,KC407 673,DQ431694,HQ67 1691,JF415929,HM4 88185,DQ116961,HM 488195,JF488089,JF 957171,HM756677,F J527738,HQ671702,J F899532,HM488197, GQ507484,JF357958 ,HM488159,DQ37718 0,HM488144,JQ7004 41,HQ671731,DQ431 708,DQ411031,JF957 176,JN183886,JXQ15 519,HM488131,KF64 7251,HM488230,DQO 80068,HM488232,DO 983578,HM756671,H M488124,JF415925, HQ671727,DQ37465 0,KC736501,DQ0800 51,JN819310,AF4047 53,HM488148,JF703 162,HM488134,DQ43 1703,HM756660,HM7 56648,JF730042,JF7 19068,HM488182,JF 415924,JF957184,H M488163,HQ705675, AY712945,JF920735, HM488251,HM48824 5,JF920729,HQ70567 2,JN716371,HM1478 23,JF920739,HM488 189,HM488242,HM48 8246,DQ164204,HQ7 05660,HQ671719,GQ 507472,JF719067,JX 015521,FJ159129,JF 957175,HQ671671,D 0164198,HQ671695, DQ411034,KC407666 ,GQ507470,GQ50747 8,HM488217,HM4881 71,JX123031,HQ671 708,AF206518,HQ67 1681,HM488118,JF9 20731,DQ374652,DQ 164200,HQ671684,E U081844,JN819305,J F920744,AY278442,J XQ15516,JF899536,K C736495,DQ431702, HM488137,DQ43171 0,HM488213,AY5326 65,HM488125,JX503 088,HM756654,JF41 5915,HQ705669,JF95 7179,HQ671728,JN8 19307,GQ507477,JN 183887,KC736500,H 0891013,HM488149, HQ537483,JQ700438 ,GQ507481,JF73004 0,AY277252,JF95716 4,HM488123,EF5718 54,HM756668,HQ671 732,JF957186,HM48 8130,AY268132,DQ1 64206,DQ431707,HQ 671677,HM147822,A F404757,HQ671680, GU828002,JF920740, HM756670,EF657887 ,JF957168,JXQ41632, HQ671705,AY701413 ,AY660002,GU01199 2,AF404755,HM4882 10,JF784158,HM488 154,HQ671694,JF920 757,HM488150,JX50 3089,CS568919,DQO 80054,JF920750,AY7 12946,AF260969,HM 488192,CS568917,H M488147,KF179639, DQ411033,HM48818 3,HQ671689,HM4882 05,HM488252,JF920 745,HQ671711,EF53 0047,GU828000,HQ6 71682,KF647253,HQ 671683,JN183888,H 0671742,JF415920,H M488157,AY277251, JF957161,HM488216 ,FJ411043,GQ50748 0,JX503094,JF95718 1,HQ891012,HM7566 67,HQ671713,HM488 136,HQ671733,JF488 091,HM488187,HQ67 1674,AB185915,JF48 8093,GQ379159,HQ7 05677,DQ164195,HM 488248,KC736502,D 0164202,JF957165,H M488184,HQ671730, JF899533,DQ164186, JQ700442,HM488228 ,DQ176637,AF40475 4,JXQ15522,DQ1766 36,HM488146,AB185 917,KC601756,HM48 8222,HM756675,GU8 28003,HM756665,HM 488151,HM488115,H 0671706,GQ507474, GU828001,EU249803 ,AF533540,JXQ41631 ,AF260968,KC73649 0,DQ431699,DQ0800 64,HM488234,DQ164 190,JN183896,HM48 8198,HM488253,JF7 07789,JF920737,HM 488208,JXQ70655,H Q671717,JN183892, HQ671693,FJ159131, HM756652,DQ41102 9,DQ080060,KF1796 40,DQ666449,JX556 213,HQ891010,HM48 8249,HM488119,JN1 83894,HM488204,DO 080052,HM488145,J 0700440,HM488193, HM488116,HM48817 4,JF920753,DQ08007 2,DQ377179,HM7566 66,GU827999,AY289 214,HM488229,HM48 8186,CS568914,HM7 56661,HM756678,JF 703161,HM488227,H M756659,AF202541, EU155484,DQ431695 ,HQ671716,AF31720 3,DQ431709,JF92074 1,DQ431697,HM4881 77,HM488221,JX503 099,GQ507475,JXQ1 5523,DQ164194,HQ6 71703,HM488140,HQ 671669,HM488231,D 0164205,FJ159130,H M488196,DQ164189, HM488190,JF920748 ,HQ671724,JN81931 6,HM488141,JX5030 95,DQ080061,JF9203 06,HQ671698,JN819 309,HM488226,HM48 8247,JF920728,JF89 9529,HM488254,DQ3 18020,JF920758,HM 488202,JF415914,HQ 671678,JF957166,DQ 431706,HQ671685,H M488127,JF488088, HM488117,JF488090 ,HM488212,KF64725 0,JF357959,JF95717 4,JF920755,GQ5074 79,KC736497,JN1838 97,AY701412,HM488 139,HM488239,DQ08 0056,DQ256376,HM4 88152,JF488095,DQ6 66450,GQ507469,KC 736499,HQ671672,JF 920743,HM488120,D 0164188,JN819321,J F920734,JXQ15515,D 0164192,JF899535,H M488180,JN858070, DQ786573,GU82799 8,JX503090,AY68894 8,JN393308,HQ6717 04,KF234080,JN8193 24,DQ080066,JF9207 42,JF703164,JXQ416 34,AY278441,HM756 662,DQ666452,HM48 8240,HM488199,KC7 36494,DQ786572,JF9 57183,HM756658,HM 488162,JN183889,H M488155,JF920756,J F899528,DQ666448,J N183893,HM488225, JN819313,HM488169 ,GQ379160,HQ67166 8,DQ318019,JF48809 7,HM488167,HM4881 38,HQ671723,CS543 188,JN819315,HM75 6673,HM488153,HQ6 71690,HQ671697,HM 488238,HM488194,F J483549,JX503091,H M488158,JF719065,J F415917,DQ080057, HQ671729,DQ08005 5,JXQ41629,JX50309 6,DQ374651,HM0514 16,KC407667,DQ431 705,JF957170,JF957 178,JF920751,DQ431 711,HM488121,HM48 8191,HM488215,HQ6 71726,HQ891011,JF7 19069,DQ005530,DQ 164193,GQ507483,H 0671714,JF703163,D 0666451,HM488114, JF488094,HM488142 ,AB185914,HM48823 7,HQ671675,DQ1641 97,GQ507468,JF415 928,HQ671701,JX50 3085,AY765264,HM4 88223,JN183891,JF7 30041,DQ164203,JF9 57173,HM488241,AY 268133,KC736488,H M488176,HQ671686, JXQ15518,HM147824 ,JF957177,HM48818 8,DQ164201,AY4902 40,KF647252,AY6036 54,HM756676,HM488 200,JF972636,HM48 8243,HM488178,HQ7 05678,CS568916,JN3 67277,HM488166,JF 957172,HQ705676,D 0431700,AY712947,J 0700437,AY712948,J F415923,DQ080058,J N819312,JF719066,J F415916,HM488122, JN183895,JX503098, HM488244,JXQ41630 ,JX123030,HQ70565 9,GQ507471,HM7566 53,KC736491,DQ164 191,HQ891009,HQ67 1710,JF920732,HM4 88168,JQ928175,DQ 080063,JF415921,DQ 164199,JF899531,HQ 671712,HQ705673,JF 488092,FJ483548,JF 920730,DQ431704,JF 920760,HM488206,D 0164196,HQ671709, JX503097,JX503086, AF481864,HQ671676 ,JF957163,JXQ15517, JN819306,HM488133 ,GQ379157,HQ67172 5,DQ080053,HM4882 03,KC736496,KF647 248,DQ118127,HM75 6650,KC954092,HM4 88214,HM488175,JN 183890,DQ080071,D 0431696,DQ431698, GU828004,GQ50747 6,HM488236,HM4882 24,HM488143,HQ671 715,HQ596519,HQ70 5663,JF920736,HM4 88161,AY646354,HM 488128,HM756669,J N819318 West Nile virus NC_009942 vertebrates,invertebrates, 681 Flaviviridae,Flavivirus,West Nile virus — JN819317,FJ425721, human HQ671721,JN858069 ,DQ080059,HQ67169 9,HM488219,JX5030 87,GQ507482,JF899 537,CS568918,JX503 084,HM488220,HM48 8126,DQ080062,DQ4 31701,JF957169,JF9 20749,EU068667,DQ 164187,JQ928174,H M488211,JF920754,J F415922,KF647249,J F957167,HQ671688, DQ080070,JF957180, JF357960,JF899530, KF588365,JF920746, JF415927,HQ671670, DQ411030,AF196835 ,JF488096,HM48820 1,HQ671673,JF48808 7,HM488165,AF4047 56,GQ379156,JF730 043,HM488173,JF48 8086,HQ671718,HQ6 71720,KC736498,HM 488129,KC736486,JF 415919,HM488181,A Y262283,JF920752,H 0671679,JF920759,K C711059,HM488132, GQ903680,KC71105 7,GQ379158,HM7566 72,JF957162,DQ0800 67,JF920733,HM488 156,DQ431712,HM48 8135,JN819311,HM7 56649,HM488160,HQ 705670,JF899534,JN 819319,JF957182,JF 920307,DQ431693,K C736493,HM756656, JX503092,HM488235 ,HM756663,JN18388 5,JF415930,JN81932 3,JXQ41628,HM7566 64,HM756651,DQ080 069,JF415926,JQ700 439,HM488179,JF95 7185,KC736489,KJ14 5832,HM488209,DQ4 11035,AB185916,JXQ 15520,HQ671722,JF9 20747,HM488207,HQ 705671,HM488170,G 0379161,KC736487, HM488250,DQ37465 3,JF920738,JN81932 0,HQ671696,DQ4110 32,HQ671700,HM488 164,HQ671707,HQ67 1687,GQ507473,KC7 36492,DQ080065,HQ 705674,JF415918,JX 503093,HM488233,H M488218,AY795965, HQ671692,HM48817 2,DQ377178,FJ15139 4,HM756657,AF2609 67,KC407673,DQ431 694,HQ671691,JF415 929,HM488185,DQ11 6961,HM488195,JF4 88089,JF957171,HM 756677,FJ527738,HQ 671702,JF899532,H M488197,GQ507484, JF357958,HM488159 ,DQ377180,HM48814 4,JQ700441,HQ6717 31,DQ431708,DQ411 031,JF957176,JN183 886,JXQ15519,HM48 8131,KF647251,HM4 88230,DQ080068,HM 488232,DQ983578,H M756671,HM488124, JF415925,HQ671727, DQ374650,KC736501 ,DQ080051,JN81931 0,AF404753,HM4881 48,JF703162,HM488 134,DQ431703,HM75 6660,HM756648,JF7 30042,JF719068,HM 488182,JF415924,JF 957184,HM488163,H 0705675,AY712945,J F920735,HM488251, HM488245,JF920729 ,HQ705672,JN71637 1,HM147823,JF9207 39,HM488189,HM488 242,HM488246,DQ16 4204,HQ705660,HQ6 71719,GQ507472,JF 719067,JXQ15521,FJ 159129,JF957175,HQ 671671,DQ164198,H 0671695,DQ411034, KC407666,GQ50747 0,GQ507478,HM4882 17,HM488171,JX123 031,HQ671708,AF20 6518,HQ671681,HM4 88118,JF920731,DQ3 74652,DQ164200,HQ 671684,EU081844,JN 819305,JF920744,AY 278442,JXQ15516,JF 899536,KC736495,D 0431702,HM488137, DQ431710,HM48821 3,AY532665,HM4881 25,JX503088,HM756 654,JF415915,HQ705 669,JF957179,HQ671 728,JN819307,GQ50 7477,JN183887,KC73 6500,HQ891013,HM4 88149,HQ537483,JQ 700438,GQ507481,J F730040,AY277252,J F957164,HM488123, EF571854,HM756668 ,HQ671732,JF957186 ,HM488130,AY26813 2,DQ164206,DQ4317 07,HQ671677,HM147 822,AF404757,HQ67 1680,GU828002,JF92 0740,HM756670,EF6 57887,JF957168,JXQ 41632,HQ671705,AY 701413,AY660002,G U011992,AF404755, HM488210,JF784158 ,HM488154,HQ67169 4,JF920757,HM4881 50,JX503089,CS5689 19,DQ080054,JF9207 50,AY712946,AF2609 69,HM488192,CS568 917,HM488147,KF17 9639,DQ411033,HM4 88183,HQ671689,HM 488205,HM488252,J F920745,HQ671711, EF530047,GU828000 ,HQ671682,KF64725 3,HQ671683,JN1838 88,HQ671742,JF4159 20,HM488157,AY277 251,JF957161,HM48 8216,FJ411043,GQ5 07480,JX503094,JF9 57181,HQ891012,HM 756667,HQ671713,H M488136,HQ671733, JF488091,HM488187 ,HQ671674,AB18591 5,JF488093,GQ3791 59,HQ705677,DQ164 195,HM488248,KC73 6502,DQ164202,JF95 7165,HM488184,HQ6 71730,JF899533,DQ1 64186,JQ700442,HM 488228,DQ176637,A F404754,JXQ15522,D 0176636,HM488146, AB185917,KC601756 ,HM488222,HM75667 5,GU828003,HM7566 65,HM488151,HM488 115,HQ671706,GQ50 7474,GU828001,EU2 49803,AF533540,JXQ 41631,AF260968,KC 736490,DQ431699,D 0080064,HM488234, DQ164190,JN183896 ,HM488198,HM48825 3,JF707789,JF92073 7,HM488208,JXQ706 55,HQ671717,JN183 892,HQ671693,FJ159 131,HM756652,DQ41 1029,DQ080060,KF1 79640,DQ666449,JX 556213,HQ891010,H M488249,HM488119, JN183894,HM488204 ,DQ080052,HM48814 5,JQ700440,HM4881 93,HM488116,HM488 174,JF920753,DQ080 072,DQ377179,HM75 6666,GU827999,AY2 89214,HM488229,HM 488186,CS568914,H M756661,HM756678, JF703161,HM488227 ,HM756659,AF20254 1,EU155484,DQ4316 95,HQ671716,AF317 203,DQ431709,JF920 741,DQ431697,HM48 8177,HM488221,JX5 03099,GQ507475,JX 015523,DQ164194,H 0671703,HM488140, HQ671669,HM48823 1,DQ164205,FJ15913 0,HM488196,DQ1641 89,HM488190,JF920 748,HQ671724,JN81 9316,HM488141,JX5 03095,DQ080061,JF9 20306,HQ671698,JN 819309,HM488226,H M488247,JF920728,J F899529,HM488254, DQ318020,JF920758, HM488202,JF415914 ,HQ671678,JF957166 ,DQ431706,HQ67168 5,HM488127,JF4880 88,HM488117,JF488 090,HM488212,KF64 7250,JF357959,JF95 7174,JF920755,GQ5 07479,KC736497,JN1 83897,AY701412,HM 488139,HM488239,D 0080056,DQ256376, HM488152,JF488095 ,DQ666450,GQ50746 9,KC736499,HQ6716 72,JF920743,HM488 120,DQ164188,JN81 9321,JF920734,JXQ1 5515,DQ164192,JF89 9535,HM488180,JN8 58070,DQ786573,GU 827998,JX503090,AY 688948,JN393308,H 0671704,KF234080,J N819324,DQ080066, JF920742,JF703164, JXQ41634,AY278441, HM756662,DQ66645 2,HM488240,HM4881 99,KC736494,DQ786 572,JF957183,HM75 6658,HM488162,JN1 83889,HM488155,JF 920756,JF899528,DO 666448,JN183893,H M488225,JN819313, HM488169,GQ37916 0,HQ671668,DQ3180 19,JF488097,HM488 167,HM488138,HQ67 1723,CS543188,JN81 9315,HM756673,HM4 88153,HQ671690,HQ 671697,HM488238,H M488194,FJ483549,J X503091,HM488158, JF719065,JF415917, DQ080057,HQ67172 9,DQ080055,JXQ416 29,JX503096,DQ374 651,HM051416,KC40 7667,DQ431705,JF95 7170,JF957178,JF92 0751,DQ431711,HM4 88121,HM488191,DQ 211652,HM488215,H 0671726,HQ891011, JF719069,DQ005530, DQ164193,GQ50748 3,HQ671714,JF70316 3,DQ666451,HM4881 14,JF488094,HM488 142,AB185914,HM48 8237,HQ671675,DQ1 64197,GQ507468,JF 415928,HQ671701,J X503085,AY765264, HM488223,JN183891 ,JF730041,DQ164203 ,JF957173,HM48824 1,AY268133,KC7364 88,HM488176,HQ671 686,JXQ15518,HM14 7824,JF957177,HM4 88188,DQ164201,AY 490240,KF647252,AY 603654,HM756676,H M488200,JF972636, HM488243,HM48817 8,HQ705678,CS5689 16,JN367277,HM488 166,JF957172,HQ705 676,DQ431700,AY71 2947,JQ700437,AY71 2948,JF415923,DQ08 0058,JN819312,JF71 9066,JF415916,HM4 88122,JN183895,JX5 03098,HM488244,JX 041630,JX123030,H 0705659,GQ507471, HM756653,KC73649 1,DQ164191,HQ8910 09,HQ671710,JF9207 32,HM488168,JQ928 175,DQ080063,JF415 921,DQ164199,JF899 531,HQ671712,HQ70 5673,JF488092,FJ48 3548,JF920730,DQ43 1704,JF920760,HM4 88206,DQ164196,HQ 671709,JX503097,JX 503086,AF481864,H 0671676,JF957163,J XQ15517,JN819306,H M488133,GQ379157, HQ671725,DQ08005 3,HM488203,KC7364 96,KF647248,DQ118 127,HM756650,KC95 4092,HM488214,HM4 88175,JN183890,DQ 080071,DQ431696,D 0431698,GU828004, GQ507476,HM48823 6,HM488224,HM4881 43,HQ671715,HQ596 519,HQ705663,JF920 736,HM488161,AY64 6354,HM488128,HM7 56669,JN819318 West Nile virus H442 NC_001563 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — EF429200 human West Nile virus H442 NC_009942 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — EF429200 human West Nile virus SA381/00 NC_001563 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — EF429199 human West Nile virus SA381/00 NC_009942 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — EF429199 human West Nile virus SA93/01 NC_001563 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — EF429198 human West Nile virus SA93/01 NC_009942 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — EF429198 human West Nile virus SPU116/89 NC_001563 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — EF429197 human West Nile virus SPU116/89 NC_009942 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — EF429197 human West Nile virus strain 385- NC_001563 vertebrates,invertebrates, 5 Flaviviridae,Flavivirus,West Nile virus — DQ066423,AY848695 99 human ,AY842931,AY84869 6,AY848697 West Nile virus strain 385- NC_009942 vertebrates,invertebrates, 5 Flaviviridae,Flavivirus,West Nile virus — DQ066423,AY848695 99 human ,AY842931,AY84869 6,AY848697 West Nile virus strain NC_001563 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — AJ965628 PT5,2 human West Nile virus strain NC_009942 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — AJ965628 PT5,2 human West Nile virus strain NC_001563 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — AJ965626 PT6,16 human West Nile virus strain NC_009942 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — AJ965626 PT6,16 human West Nile virus strain NC_001563 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — AM404308 PTRoxo human West Nile virus strain NC_009942 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,West Nile virus — AM404308 PTRoxo human Yaba-7 virus NC_009896 vertebrates,invertebrates, 1 Bunyaviridae,Orthobunyavirus,Akabane virus seg. S AF362392 human Yellow fever virus NC_002031 vertebrates,invertebrates, 61 Flaviviridae,Flavivirus,Yellow fever virus — JN811143,JF912190, human JF912189,AY968064, JX898877,JF912186, U21056,JF912182,JF 912181,JN811142,JF 912179,AY968065,JF 912180,JX898875,JX 898880,JF912183,JX 898870,U17066,JN62 8281,JX898872,DQ1 18157,JX503529,AF0 52439,U21055,JX898 871,JF912188,JF912 187,KF769015,DQ23 5229,JX898868,AF05 2444,JF912184,JX89 8874,JX898879,GQ3 79162,JN811140,JX8 98876,JX898878,AF0 52438,JF912185,JN8 11141,JN628280,AY6 03338,GQ379163,JX 898881,AF052446,D 0100292,X15062,KF 769016,AF052437,AY 640589,XQ3700,JN62 0362,JX898869,U547 98,AF052445,JN6282 79,U17067,AY572535 ,JX898873,AF094612 Yellow fever virus NC_002031 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Yellow fever virus — FJ654700 17D/Tiantan human Yokose virus NC_005039 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Yokose virus — AB114858 human Zaliv Terpenia virus NC_005214 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. L HM566191 human Zaliv Terpenia virus NC_005220 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. M HM566193 human Zaliv Terpenia virus NC_005221 vertebrates,invertebrates, 1 Bunyaviridae,Phlebovirus,Uukuniemi virus seg. S HM566192 human Zika virus NC_012532 vertebrates,invertebrates, 1 Flaviviridae,Flavivirus,Zika virus — AY632535 human

TABLE 11 Percentages of human-mapped reads S1 S1 S2 S2 S3 S3 S4 S4 S5 S5 Pre- Post- Pre- Post- Pre- Post- Pre- Post- Pre- Post- capture capture capture capture capture capture capture capture capture capture chr 1 8.22% 8.29% 7.93% 7.74% 5.56% 6.06% 9.30% 8.40% 8.10% 7.95% chr 2 8.86% 8.75% 7.17% 8.33% 5.01% 5.22% 7.24% 7.61% 8.35% 8.29% chr 3 6.64% 6.51% 4.98% 5.42% 4.29% 4.39% 5.84% 5.46% 6.06% 5.89% chr 4 6.91% 6.83% 5.41% 5.85% 4.00% 4.11% 5.02% 5.23% 5.60% 5.59% chr 5 6.16% 6.10% 5.60% 5.94% 4.39% 4.47% 5.40% 5.22% 5.64% 5.51% chr 6 5.81% 5.74% 4.91% 4.81% 3.35% 3.45% 5.40% 5.60% 5.93% 5.70% chr 7 5.28% 5.25% 4.93% 5.53% 3.18% 3.29% 7.11% 6.20% 5.04% 5.01% chr 8 5.00% 4.95% 4.26% 4.22% 2.96% 3.03% 4.41% 4.30% 4.57% 4.52% chr 9 3.89% 3.89% 3.10% 2.94% 2.43% 2.59% 3.52% 3.57% 3.63% 3.67% chr 10 5.78% 5.76% 5.72% 5.40% 2.95% 3.24% 6.39% 6.48% 8.00% 7.99% chr 11 4.26% 4.28% 4.72% 3.15% 3.07% 3.14% 3.88% 3.95% 4.40% 4.21% chr 12 4.11% 4.10% 3.10% 4.02% 2.98% 2.99% 3.42% 3.61% 3.75% 3.78% chr 13 3.15% 3.05% 2.60% 2.05% 2.54% 2.46% 2.69% 2.47% 2.42% 2.45% chr 14 2.72% 2.71% 2.50% 2.20% 1.74% 1.74% 4.17% 3.26% 2.65% 2.60% chr 15 2.20% 2.15% 2.22% 1.92% 1.39% 1.42% 2.87% 2.61% 2.46% 2.38% chr 16 2.62% 2.70% 3.17% 2.92% 1.66% 1.79% 3.49% 3.94% 4.47% 4.76% chr 17 1.65% 1.65% 1.69% 2.17% 1.14% 1.21% 2.16% 2.21% 2.35% 2.37% chr 18 2.95% 2.89% 2.29% 2.20% 1.58% 1.60% 3.51% 3.57% 2.82% 2.74% chr 19 1.35% 1.49% 2.10% 1.81% 0.74% 0.89% 1.98% 2.23% 1.91% 2.05% chr 20 1.44% 1.42% 1.69% 1.78% 0.96% 0.95% 1.86% 1.84% 1.91% 1.83% chr 21 1.20% 1.22% 1.24% 1.37% 0.83% 0.86% 1.09% 1.21% 1.21% 1.28% chr 22 0.52% 0.53% 0.93% 1.15% 0.43% 0.44% 1.12% 1.08% 0.93% 0.91% MT 0.22% 0.22% 10.65% 10.07% 27.65% 26.51% 0.79% 0.95% 0.44% 0.37% X 6.57% 6.68% 2.76% 2.63% 1.87% 2.00% 2.41% 2.61% 2.71% 2.73% Y 0.27% 0.33% 1.10% 1.52% 0.87% 1.16% 1.62% 2.26% 1.96% 2.36% S6 S6 S7 S7 S8 S8 P1-14 P1-14 Pre- Post- Pre- Post- Pre- Post- Pre- Post- capture capture capture capture capture capture capture capture chr 1 7.58% 7.54% 8.37% 8.13% 7.45% 7.80% 8.80% 8.67% chr 2 8.53% 8.11% 7.76% 8.07% 9.40% 8.89% 8.56% 8.44% chr 3 7.00% 6.47% 6.04% 5.88% 6.27% 6.42% 6.22% 6.30% chr 4 5.91% 5.93% 5.72% 5.57% 5.99% 6.12% 6.09% 6.18% chr 5 5.50% 5.37% 5.19% 5.32% 5.63% 5.93% 5.72% 5.84% chr 6 6.46% 6.20% 4.82% 4.95% 6.34% 6.43% 5.66% 5.71% chr 7 4.72% 4.87% 5.62% 5.54% 5.44% 5.36% 5.46% 5.39% chr 8 4.36% 4.34% 5.16% 4.76% 4.52% 4.80% 4.84% 4.82% chr 9 3.53% 3.63% 3.80% 3.72% 3.72% 3.89% 3.86% 3.90% chr 10 7.38% 7.31% 7.02% 6.94% 6.22% 5.46% 6.26% 5.87% chr 11 4.87% 4.48% 4.43% 4.05% 3.84% 4.23% 4.28% 4.33% chr 12 3.65% 3.76% 4.74% 4.13% 4.35% 4.45% 4.15% 4.22% chr 13 2.34% 2.45% 2.49% 2.52% 3.20% 3.26% 2.82% 2.83% chr 14 2.43% 2.56% 2.35% 2.44% 2.65% 2.84% 2.77% 2.80% chr 15 2.97% 2.62% 2.50% 2.36% 2.31% 2.55% 2.50% 2.54% chr 16 4.18% 4.46% 3.57% 3.59% 4.23% 3.64% 3.08% 3.04% chr 17 2.04% 2.10% 2.01% 2.13% 2.05% 2.28% 2.20% 2.41% chr 18 2.67% 2.59% 2.75% 2.88% 3.27% 2.98% 2.66% 2.60% chr 19 1.67% 1.99% 1.89% 2.01% 1.77% 1.82% 2.13% 2.13% chr 20 2.13% 2.01% 2.22% 1.98% 1.71% 1.92% 1.81% 1.84% chr 21 1.34% 1.34% 1.08% 1.21% 1.17% 1.24% 1.20% 1.24% chr 22 0.88% 0.90% 1.02% 1.01% 1.24% 1.28% 0.88% 0.90% MT 0.42% 0.49% 1.87% 2.10% 0.29% 0.32% 0.43% 0.42% X 2.49% 2.70% 2.50% 2.68% 2.46% 2.72% 4.55% 4.62% Y 2.33% 2.86% 2.00% 2.79% 2.17% 1.68% 0.82% 0.94% 

What is claimed is:
 1. A method to detect one or more viruses in a sample, the method comprising: a) contacting a sample with a panel comprising probes capable of specifically hybridizing to greater than 10,000 viral nucleic acid sequences; b) isolating the probes that specifically hybridize to viral nucleic acid sequences within the sample; c) sequencing the viral nucleic acid sequences isolated; and d) comparing the sequences from (c) with a database comprising reference viral nucleic acid sequences to determine the identity of the viral nucleic acid in the sample; wherein the panel of probes targets complete viral genomes.
 2. The method of claim 1, wherein nucleic acid is isolated prior to step (a).
 3. The method of claim 2, wherein isolated nucleic acid is reverse transcribed and amplified prior to step (a) thereby allowing detection of DNA and RNA viral nucleic acid.
 4. The method of claim 3, wherein the nucleic acid is sheared to generate fragments with an average length of 500 bp.
 5. The method of claim 1, wherein the panel comprises about 2×10⁶ probes capable of specifically hybridizing to the viral nucleic acid sequences.
 6. The method of claim 1, wherein the panel comprises probes capable of specifically hybridizing to greater than 50,000 viral nucleic acid sequences.
 7. The method of claim 1, wherein the probes are about 50 to about 105 bp.
 8. The method of claim 1, wherein the panel comprises probes capable of specifically hybridizing to greater than 50 Mb of viral nucleic acid sequences.
 9. The method of claim 1, wherein the panel comprises probes capable of specifically hybridizing to more than 1 virus selected from the group consisting of Deltavirus, Kobuvirus, Aphthovirus, Avihepatovirus, Cardiovirus, Cosavirus, Dicipivirus, Enterovirus, Erbovirus, Gallivirus, Hepatovirus, Hunnivirus, Aquamavirius, Megrivirus, Oscivirus, Parechovirus, Pasivirus, Passervirus, Salivirus, Sapeiovirus, Senecavirus, Teschovirus, Tremovirus, Avulavirus, Ferlavirus, Henipavirus, Metapneumovirus, Morbillivirus, Pneumovirus, Respirovirus, Rubulavirus, Ephemerovirus, Lyssavirus, Novirhabdovirus, Perhabdovirus, Sprivirus, Tibrovirus, Tupavirus, Vesiculovirus, Alphacoronavirus, Bafinivirus, Betacoronavirus, Deltacoronvirus, Gammacoronavirus, Torovirus, Influenza A, Influenza B, Influenza C, Influenza D, Isavirus, Thogotovirus, Lagovirus, Nebovirus Norovirus, Sapovirus, Vesivirus, Flavivirus, Hepacivirus, Pegivirus, Pestivirus, Hantavirus, Nairovirus, Orthobunyavirus, Phlebovirus, Cuevavirus, Ebolavirus, Marburgvirus, Avastrovirus, Mamastrovirus, Hepevirus, Arenavirus, Alphavirus, Rubivirus, Alphanodavirus, Betanodavirus, Negevirus, Nyavirus, Arterivirus, Bornavirus, Gammapapillomavirus, Alphapapillomavirus, Chipapillomavirus, Deltapapillomavirus, Dyodeltapapillomavirus, Dyoepsilonpapillomavirus, Dyoetapapillomavirus, Dyoiotapapillomavirus, Dyolambdapapillomavirus, Dyomupapillomavirus, Dyonupapillomavirus, Dyopipapillomavirus, Dyorhopapillomavirus, Dyosigmapapillomavirus, Dyoxipapillomavirus, Dyozetapapillomavirus, Epsilonpapillomavirus, Etapapillomavirus, Betapapillomavirus, Lotapapillomavirus, Kappapapillomavirus, Lambdapapillomavirus, Mupapillomavirus, Nupapillomavirus, Omegapapillomavirus, Omikronpapillomavirus, Phipapillomavirus, Psipapillomavirus, Rhopapillomavirus, Sigmapapillomavirus, Taupapillomavirus, Thetapapillomavirus, Upsilonpapillomavirus, Xipapillomavirus, Zetapapillomavirus, Percavirus, Cytomelovirus, Lymphocryptovirus, Macavirus, Mardivirus, Muromagalovirus, Iltovirus, Proboscivirus, Rhadinovirus, Roseolovirus, Simplexvirus, Varicellovirus Molluscipoxvirus, Avipoxvirus, Crocdylidpoxvirus, Leporipoxvirus, Capripoxvirus, Orthopoxvirus, Parapoxvirus, Suipoxvirus, Yatapoxvirus, Atadenovirus, Aviadenovirus, Mastadenovirus, Siadenovirus, Batrachovirus, Cyprinivirus, Ictalurivirus, Lymphocystivirus, Megalocytivirus, ranavirus, Asfivirus, Ostreavirus, Polyomavirus, Lotatorquevirus, Alphatorquevirus, Epsilontorquevirus, Etatorquevirus, Gammatorquevirus, Betatorquevirus, Kappatorquevirus, Lambdatorquevirus, thetatorquevirus, Zetatorquevirus, Amdoparvovirus, Bocaparvovirus, Copiparvovirus, Dependoparvovirus, Erythroparvovirus, Hepandensovirus, Protoparvovirus, tetraparvovirus, Circivirus, Gyrovirus, Aquareovirus, Coltivirus, Orbivirus, Orthoreovirus, Rotavirus, Seadornavirus, Aquabirnavirus, Avibirnavirus, Blosnavirus, Picobirnavirus, Alpharetrovirus, Betaretrovirus, Deltaretrovirus, Epsilonretrovirus, Gammaretrovirus, Lentivirus, Spumavirus, Avihepadnavirus, Prthohepadnavirus, and Delatvirus.
 10. The method of claim 1, wherein the sample is a biological sample obtained from a subject.
 11. The method of claim 10, wherein the biological sample is selected from the group consisting of nasopharyngeal swab, stool and plasma.
 12. The method of claim 10, wherein the subject is treated based on the virus detected. 